View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0120_low_1 (Length: 510)

Name: NF0120_low_1
Description: NF0120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0120_low_1
NF0120_low_1
[»] chr1 (89 HSPs)
chr1 (164-417)||(4777378-4777635)
chr1 (120-198)||(49517013-49517091)
chr1 (96-204)||(44940280-44940386)
chr1 (70-178)||(30257646-30257754)
chr1 (116-250)||(33527192-33527325)
chr1 (112-198)||(37842396-37842482)
chr1 (96-198)||(48830101-48830203)
chr1 (89-178)||(5150900-5150989)
chr1 (115-191)||(9656600-9656676)
chr1 (70-198)||(17269193-17269321)
chr1 (118-201)||(4276683-4276766)
chr1 (90-184)||(4363651-4363745)
chr1 (152-198)||(15360837-15360883)
chr1 (96-190)||(16322800-16322894)
chr1 (124-198)||(40304107-40304181)
chr1 (119-248)||(10199456-10199584)
chr1 (113-186)||(34179914-34179987)
chr1 (112-198)||(49557084-49557172)
chr1 (118-178)||(4548684-4548744)
chr1 (118-178)||(12477334-12477394)
chr1 (118-178)||(45205031-45205091)
chr1 (124-196)||(46980182-46980254)
chr1 (107-198)||(7273975-7274066)
chr1 (152-195)||(14737786-14737829)
chr1 (119-190)||(17631149-17631220)
chr1 (158-197)||(36641819-36641858)
chr1 (119-190)||(43029450-43029520)
chr1 (112-191)||(45769785-45769863)
chr1 (107-197)||(4200173-4200263)
chr1 (96-194)||(4622040-4622138)
chr1 (118-184)||(15566683-15566749)
chr1 (89-190)||(30259504-30259606)
chr1 (96-189)||(35080094-35080188)
chr1 (118-192)||(51695542-51695615)
chr1 (152-201)||(4202210-4202259)
chr1 (152-197)||(4215316-4215361)
chr1 (118-198)||(23544686-23544767)
chr1 (153-198)||(23895279-23895324)
chr1 (119-188)||(27738228-27738297)
chr1 (126-195)||(29007771-29007840)
chr1 (156-201)||(44936675-44936720)
chr1 (121-197)||(1393069-1393145)
chr1 (122-198)||(1730835-1730910)
chr1 (119-179)||(10581125-10581185)
chr1 (152-196)||(13809943-13809987)
chr1 (152-244)||(34619459-34619550)
chr1 (118-198)||(34952158-34952238)
chr1 (115-179)||(37272630-37272694)
chr1 (118-198)||(42556678-42556758)
chr1 (118-198)||(45999335-45999415)
chr1 (158-201)||(289180-289223)
chr1 (119-190)||(1255479-1255550)
chr1 (113-196)||(4019635-4019716)
chr1 (119-198)||(4338592-4338670)
chr1 (115-178)||(7218118-7218181)
chr1 (71-190)||(7262518-7262637)
chr1 (69-188)||(44031997-44032116)
chr1 (159-198)||(50319235-50319274)
chr1 (166-250)||(1432409-1432490)
chr1 (118-168)||(8130409-8130459)
chr1 (116-190)||(15437914-15437988)
chr1 (152-190)||(23373371-23373409)
chr1 (118-172)||(25006081-25006135)
chr1 (115-197)||(25944377-25944458)
chr1 (152-198)||(36151586-36151632)
chr1 (152-198)||(39803967-39804013)
chr1 (162-220)||(43722406-43722464)
chr1 (123-189)||(48064261-48064327)
chr1 (89-190)||(3924575-3924676)
chr1 (97-198)||(6932987-6933088)
chr1 (118-198)||(17422985-17423066)
chr1 (129-190)||(17628550-17628611)
chr1 (116-197)||(25479525-25479606)
chr1 (123-184)||(30371105-30371166)
chr1 (152-201)||(34380385-34380434)
chr1 (123-256)||(36070136-36070268)
chr1 (152-197)||(38867914-38867959)
chr1 (152-197)||(40943465-40943510)
chr1 (152-197)||(46499935-46499980)
chr1 (162-198)||(3887723-3887759)
chr1 (162-190)||(7028243-7028271)
chr1 (162-190)||(9572199-9572227)
chr1 (121-197)||(11211062-11211138)
chr1 (118-198)||(15579426-15579505)
chr1 (120-184)||(28467356-28467420)
chr1 (152-196)||(37517275-37517319)
chr1 (161-197)||(42169632-42169668)
chr1 (118-198)||(43420201-43420281)
chr1 (203-258)||(51190716-51190769)
[»] chr4 (73 HSPs)
chr4 (30-198)||(3175894-3176062)
chr4 (118-244)||(25885758-25885882)
chr4 (96-198)||(23819033-23819134)
chr4 (96-173)||(21157736-21157813)
chr4 (96-197)||(29263314-29263415)
chr4 (118-198)||(49219082-49219162)
chr4 (118-190)||(54325084-54325156)
chr4 (115-190)||(10192235-10192310)
chr4 (122-198)||(53626717-53626795)
chr4 (112-190)||(51630062-51630140)
chr4 (168-244)||(34213691-34213765)
chr4 (70-195)||(52735068-52735192)
chr4 (152-201)||(54327530-54327579)
chr4 (120-189)||(55870390-55870459)
chr4 (152-195)||(23815316-23815359)
chr4 (121-188)||(24160545-24160612)
chr4 (122-197)||(36460530-36460605)
chr4 (117-196)||(43372015-43372094)
chr4 (159-198)||(44119250-44119289)
chr4 (152-198)||(3155546-3155592)
chr4 (96-198)||(18628568-18628670)
chr4 (124-190)||(24929444-24929510)
chr4 (120-198)||(30207620-30207697)
chr4 (116-198)||(46415837-46415919)
chr4 (120-190)||(49085940-49086010)
chr4 (152-198)||(49803154-49803200)
chr4 (156-198)||(51044544-51044586)
chr4 (119-184)||(437480-437545)
chr4 (157-198)||(19422361-19422402)
chr4 (116-177)||(19429533-19429594)
chr4 (119-195)||(17884014-17884090)
chr4 (118-182)||(28581957-28582021)
chr4 (152-196)||(30024645-30024689)
chr4 (120-196)||(46796963-46797039)
chr4 (118-198)||(56480291-56480371)
chr4 (118-173)||(927260-927315)
chr4 (119-190)||(4071833-4071904)
chr4 (152-198)||(4191682-4191729)
chr4 (119-198)||(6364092-6364171)
chr4 (123-198)||(8130117-8130192)
chr4 (115-198)||(9319239-9319322)
chr4 (143-190)||(20936074-20936121)
chr4 (118-244)||(27043877-27044001)
chr4 (115-238)||(43824189-43824309)
chr4 (112-191)||(47119006-47119085)
chr4 (152-191)||(52926178-52926217)
chr4 (118-176)||(2996538-2996596)
chr4 (152-190)||(3662299-3662337)
chr4 (152-198)||(4798640-4798686)
chr4 (152-190)||(19670876-19670914)
chr4 (120-190)||(28232496-28232566)
chr4 (152-198)||(34368820-34368866)
chr4 (156-194)||(35743251-35743289)
chr4 (116-178)||(44319912-44319974)
chr4 (156-198)||(47970261-47970303)
chr4 (152-198)||(52645830-52645876)
chr4 (118-179)||(927438-927499)
chr4 (117-190)||(18630631-18630704)
chr4 (124-177)||(22471295-22471348)
chr4 (156-197)||(27623579-27623620)
chr4 (121-198)||(31038917-31038994)
chr4 (118-179)||(52746887-52746948)
chr4 (162-198)||(1203208-1203244)
chr4 (156-196)||(2702985-2703025)
chr4 (158-198)||(3176209-3176249)
chr4 (119-187)||(11802488-11802556)
chr4 (162-194)||(13216295-13216327)
chr4 (158-198)||(19040202-19040242)
chr4 (158-198)||(21193941-21193981)
chr4 (158-198)||(27671919-27671959)
chr4 (154-198)||(28623232-28623276)
chr4 (120-184)||(40174520-40174584)
chr4 (128-196)||(42321936-42322004)
[»] chr5 (62 HSPs)
chr5 (96-190)||(14295457-14295551)
chr5 (116-190)||(28586811-28586885)
chr5 (112-197)||(9202789-9202874)
chr5 (121-198)||(12407711-12407788)
chr5 (112-198)||(26209454-26209539)
chr5 (89-192)||(18875310-18875413)
chr5 (118-177)||(41277397-41277456)
chr5 (152-198)||(29117011-29117057)
chr5 (112-190)||(32172604-32172682)
chr5 (162-243)||(11054085-11054165)
chr5 (100-196)||(14257410-14257506)
chr5 (124-176)||(32059642-32059694)
chr5 (119-198)||(16889678-16889757)
chr5 (119-198)||(18704084-18704162)
chr5 (118-197)||(26516344-26516423)
chr5 (97-204)||(30217019-30217126)
chr5 (116-171)||(41957496-41957551)
chr5 (152-198)||(985576-985622)
chr5 (118-208)||(12425504-12425594)
chr5 (156-198)||(35135747-35135789)
chr5 (118-196)||(39594753-39594830)
chr5 (124-198)||(42583092-42583166)
chr5 (89-190)||(4855649-4855750)
chr5 (157-198)||(7096213-7096254)
chr5 (121-219)||(14599353-14599453)
chr5 (107-184)||(36639479-36639556)
chr5 (162-198)||(4014515-4014551)
chr5 (158-198)||(12595538-12595578)
chr5 (150-190)||(35095862-35095902)
chr5 (107-179)||(36539708-36539780)
chr5 (122-190)||(37063125-37063193)
chr5 (127-179)||(39750105-39750157)
chr5 (89-188)||(12595758-12595857)
chr5 (119-178)||(27772686-27772745)
chr5 (115-190)||(35960365-35960439)
chr5 (162-197)||(41981799-41981834)
chr5 (123-190)||(42569032-42569099)
chr5 (152-190)||(10280657-10280695)
chr5 (152-190)||(10303752-10303790)
chr5 (152-198)||(28578835-28578881)
chr5 (96-194)||(37588385-37588483)
chr5 (121-191)||(39823171-39823241)
chr5 (123-196)||(9703292-9703365)
chr5 (152-197)||(11615452-11615497)
chr5 (158-195)||(32969204-32969241)
chr5 (153-198)||(39128582-39128627)
chr5 (156-196)||(1636842-1636882)
chr5 (150-190)||(7853609-7853649)
chr5 (114-142)||(8089803-8089831)
chr5 (118-198)||(10907322-10907402)
chr5 (70-198)||(12460000-12460127)
chr5 (118-190)||(12975298-12975370)
chr5 (119-195)||(15402877-15402953)
chr5 (160-192)||(20922785-20922817)
chr5 (89-141)||(25705677-25705729)
chr5 (162-198)||(27106014-27106050)
chr5 (159-199)||(29590828-29590868)
chr5 (162-198)||(33459026-33459062)
chr5 (137-193)||(38766909-38766965)
chr5 (118-198)||(39105407-39105487)
chr5 (162-198)||(40048371-40048407)
chr5 (152-204)||(40097484-40097536)
[»] chr6 (53 HSPs)
chr6 (70-190)||(25099994-25100114)
chr6 (123-198)||(29274281-29274356)
chr6 (89-198)||(33500499-33500608)
chr6 (115-198)||(33068604-33068688)
chr6 (115-198)||(32975921-32976004)
chr6 (116-197)||(281893-281974)
chr6 (120-188)||(10154174-10154242)
chr6 (117-196)||(4006659-4006738)
chr6 (121-196)||(9093606-9093681)
chr6 (152-198)||(24836280-24836326)
chr6 (118-195)||(1402942-1403019)
chr6 (115-179)||(3155138-3155202)
chr6 (152-200)||(10728573-10728621)
chr6 (118-190)||(33787792-33787864)
chr6 (120-195)||(2027455-2027530)
chr6 (151-198)||(4420560-4420607)
chr6 (119-198)||(10016488-10016567)
chr6 (157-195)||(5328920-5328958)
chr6 (164-198)||(9559634-9559668)
chr6 (115-197)||(22742310-22742392)
chr6 (96-194)||(26491621-26491719)
chr6 (129-198)||(323754-323823)
chr6 (154-199)||(30865424-30865469)
chr6 (113-190)||(33911324-33911400)
chr6 (123-195)||(4247113-4247185)
chr6 (118-190)||(7354155-7354227)
chr6 (116-196)||(24782004-24782084)
chr6 (95-175)||(25426136-25426216)
chr6 (158-198)||(28531628-28531668)
chr6 (119-182)||(3785748-3785811)
chr6 (149-196)||(32513770-32513816)
chr6 (121-190)||(326403-326473)
chr6 (167-197)||(2023725-2023755)
chr6 (156-198)||(2514645-2514687)
chr6 (152-198)||(20671946-20671992)
chr6 (159-201)||(21959668-21959710)
chr6 (152-190)||(24774709-24774747)
chr6 (159-201)||(29940736-29940778)
chr6 (164-198)||(31672013-31672047)
chr6 (152-198)||(34429771-34429817)
chr6 (160-198)||(34544539-34544577)
chr6 (118-179)||(1497943-1498004)
chr6 (70-198)||(8010300-8010428)
chr6 (150-195)||(11393833-11393877)
chr6 (152-197)||(27857319-27857364)
chr6 (156-197)||(30784501-30784542)
chr6 (89-198)||(31324399-31324508)
chr6 (97-198)||(33067102-33067202)
chr6 (162-198)||(507163-507199)
chr6 (162-198)||(2206533-2206569)
chr6 (116-184)||(14492259-14492327)
chr6 (115-188)||(31807890-31807964)
chr6 (123-178)||(33817823-33817879)
[»] scaffold0020 (1 HSPs)
scaffold0020 (96-190)||(159998-160091)
[»] chr8 (74 HSPs)
chr8 (115-192)||(8799354-8799431)
chr8 (162-223)||(1929969-1930030)
chr8 (127-194)||(29699201-29699268)
chr8 (115-198)||(34080310-34080393)
chr8 (107-196)||(4763863-4763952)
chr8 (115-184)||(30013175-30013244)
chr8 (152-196)||(40728499-40728543)
chr8 (122-198)||(42597344-42597420)
chr8 (119-174)||(6864507-6864562)
chr8 (156-199)||(26820141-26820184)
chr8 (116-179)||(34770854-34770917)
chr8 (87-196)||(6509319-6509426)
chr8 (87-141)||(8578573-8578627)
chr8 (123-197)||(12361136-12361210)
chr8 (113-198)||(1470898-1470983)
chr8 (125-198)||(9699944-9700017)
chr8 (119-196)||(10727142-10727218)
chr8 (116-197)||(29973025-29973106)
chr8 (119-190)||(2605970-2606041)
chr8 (123-198)||(5071019-5071094)
chr8 (119-198)||(11795035-11795114)
chr8 (96-178)||(2093242-2093324)
chr8 (152-198)||(3537112-3537158)
chr8 (116-198)||(4558741-4558823)
chr8 (96-190)||(7918798-7918892)
chr8 (112-198)||(12224940-12225026)
chr8 (152-198)||(27465316-27465362)
chr8 (116-190)||(27728066-27728140)
chr8 (115-177)||(29592576-29592638)
chr8 (119-223)||(7514495-7514600)
chr8 (152-189)||(10437837-10437874)
chr8 (89-198)||(13652158-13652267)
chr8 (89-198)||(13710801-13710910)
chr8 (116-197)||(31862437-31862518)
chr8 (156-197)||(38561670-38561711)
chr8 (154-190)||(11119082-11119118)
chr8 (118-198)||(30988039-30988119)
chr8 (154-190)||(39392744-39392780)
chr8 (169-243)||(18930602-18930674)
chr8 (119-198)||(28769387-28769466)
chr8 (123-190)||(35374425-35374492)
chr8 (158-188)||(2100758-2100788)
chr8 (123-197)||(2699250-2699324)
chr8 (118-196)||(9836901-9836979)
chr8 (116-198)||(11188200-11188282)
chr8 (152-190)||(14482153-14482191)
chr8 (157-195)||(18356265-18356303)
chr8 (89-139)||(18931316-18931366)
chr8 (156-198)||(26215439-26215481)
chr8 (96-178)||(28784820-28784902)
chr8 (158-223)||(926405-926470)
chr8 (152-197)||(6918260-6918305)
chr8 (165-198)||(10114433-10114466)
chr8 (152-197)||(11000642-11000687)
chr8 (96-173)||(11813130-11813207)
chr8 (149-198)||(27320259-27320307)
chr8 (119-196)||(33209268-33209345)
chr8 (115-184)||(34551077-34551146)
chr8 (149-198)||(34788505-34788554)
chr8 (118-198)||(35298524-35298605)
chr8 (152-197)||(35534942-35534987)
chr8 (152-197)||(40280286-40280331)
chr8 (112-176)||(787147-787211)
chr8 (158-190)||(2364560-2364592)
chr8 (152-196)||(2698738-2698782)
chr8 (152-188)||(12291697-12291733)
chr8 (118-198)||(16210933-16211013)
chr8 (152-184)||(20672729-20672761)
chr8 (164-196)||(29168145-29168177)
chr8 (118-198)||(30627949-30628029)
chr8 (118-198)||(31884537-31884617)
chr8 (122-178)||(33912096-33912152)
chr8 (156-244)||(34522141-34522228)
chr8 (157-197)||(34563194-34563234)
[»] chr3 (74 HSPs)
chr3 (70-199)||(52618945-52619074)
chr3 (117-197)||(38462225-38462305)
chr3 (115-197)||(24887327-24887409)
chr3 (107-198)||(22232769-22232860)
chr3 (119-198)||(24235731-24235810)
chr3 (112-190)||(33405208-33405286)
chr3 (95-198)||(24158527-24158629)
chr3 (96-197)||(28306102-28306203)
chr3 (122-198)||(3182413-3182489)
chr3 (121-196)||(23785200-23785275)
chr3 (135-198)||(24605080-24605143)
chr3 (122-196)||(10101527-10101601)
chr3 (122-196)||(10212452-10212526)
chr3 (118-196)||(39602257-39602334)
chr3 (116-198)||(40122798-40122879)
chr3 (116-197)||(36646427-36646508)
chr3 (152-197)||(49586997-49587042)
chr3 (107-178)||(20502104-20502176)
chr3 (116-171)||(1217845-1217900)
chr3 (124-219)||(1395593-1395688)
chr3 (152-223)||(2128332-2128403)
chr3 (118-177)||(2201092-2201151)
chr3 (120-179)||(31337450-31337509)
chr3 (119-198)||(33307500-33307579)
chr3 (152-199)||(34254890-34254937)
chr3 (119-190)||(36783382-36783453)
chr3 (150-197)||(38902030-38902077)
chr3 (115-170)||(41452494-41452549)
chr3 (128-250)||(42747834-42747954)
chr3 (159-201)||(905058-905100)
chr3 (96-174)||(48286835-48286913)
chr3 (152-198)||(48364960-48365006)
chr3 (157-195)||(54775074-54775112)
chr3 (129-198)||(20192664-20192733)
chr3 (121-198)||(20220383-20220460)
chr3 (70-171)||(20467185-20467286)
chr3 (125-198)||(33882971-33883044)
chr3 (121-198)||(48397589-48397666)
chr3 (152-196)||(30956707-30956751)
chr3 (152-196)||(30972519-30972563)
chr3 (107-184)||(33965525-33965604)
chr3 (119-178)||(1816546-1816605)
chr3 (118-189)||(29600772-29600843)
chr3 (143-198)||(41028923-41028978)
chr3 (139-198)||(51278225-51278284)
chr3 (119-198)||(52597631-52597710)
chr3 (116-190)||(237348-237422)
chr3 (122-196)||(10357378-10357452)
chr3 (96-198)||(27792815-27792917)
chr3 (158-200)||(34318029-34318071)
chr3 (152-198)||(38971202-38971248)
chr3 (152-198)||(44061104-44061150)
chr3 (152-198)||(44284139-44284185)
chr3 (156-198)||(53736198-53736240)
chr3 (153-198)||(8007777-8007822)
chr3 (164-197)||(16790181-16790214)
chr3 (156-189)||(20267107-20267140)
chr3 (158-195)||(23952193-23952230)
chr3 (113-190)||(26474296-26474373)
chr3 (152-197)||(32095272-32095317)
chr3 (163-196)||(37689178-37689211)
chr3 (152-197)||(46778308-46778353)
chr3 (152-197)||(48323765-48323810)
chr3 (152-196)||(583991-584035)
chr3 (152-196)||(15304428-15304472)
chr3 (112-160)||(22343589-22343637)
chr3 (96-176)||(23315591-23315671)
chr3 (118-190)||(25183035-25183107)
chr3 (118-190)||(25447291-25447363)
chr3 (158-190)||(26990685-26990717)
chr3 (162-198)||(36887465-36887501)
chr3 (158-198)||(43948602-43948642)
chr3 (87-135)||(44284096-44284144)
chr3 (127-194)||(52243521-52243589)
[»] chr2 (82 HSPs)
chr2 (115-197)||(17952745-17952827)
chr2 (107-197)||(42817412-42817502)
chr2 (98-198)||(3673750-3673850)
chr2 (118-198)||(10143115-10143195)
chr2 (70-178)||(29300608-29300716)
chr2 (123-198)||(39567846-39567921)
chr2 (116-190)||(34054946-34055020)
chr2 (112-178)||(43141834-43141900)
chr2 (89-197)||(1939350-1939458)
chr2 (113-190)||(13866840-13866917)
chr2 (116-201)||(29935943-29936028)
chr2 (122-179)||(33942112-33942169)
chr2 (96-195)||(6988061-6988160)
chr2 (114-197)||(15377709-15377792)
chr2 (112-187)||(33256694-33256769)
chr2 (118-196)||(14666493-14666571)
chr2 (115-197)||(28803550-28803632)
chr2 (89-190)||(9878700-9878801)
chr2 (118-179)||(11513860-11513921)
chr2 (89-198)||(28933767-28933876)
chr2 (113-190)||(37053545-37053622)
chr2 (70-190)||(1742031-1742151)
chr2 (118-198)||(5133715-5133795)
chr2 (118-190)||(18962085-18962157)
chr2 (123-198)||(2416256-2416331)
chr2 (118-177)||(5043607-5043666)
chr2 (107-198)||(10563594-10563685)
chr2 (118-240)||(18066031-18066151)
chr2 (117-199)||(1869830-1869910)
chr2 (152-198)||(3611169-3611215)
chr2 (162-196)||(3932295-3932329)
chr2 (152-198)||(13630362-13630408)
chr2 (116-197)||(29633016-29633098)
chr2 (116-198)||(32694155-32694237)
chr2 (152-198)||(33576675-33576721)
chr2 (121-179)||(40145424-40145482)
chr2 (107-188)||(15281440-15281521)
chr2 (152-197)||(32098389-32098434)
chr2 (137-190)||(33192144-33192197)
chr2 (116-188)||(35099644-35099717)
chr2 (112-177)||(35485881-35485946)
chr2 (116-196)||(22681230-22681310)
chr2 (162-198)||(26143732-26143768)
chr2 (118-194)||(36863672-36863748)
chr2 (156-195)||(3458603-3458642)
chr2 (117-244)||(4090247-4090373)
chr2 (118-176)||(7103529-7103588)
chr2 (158-197)||(31461382-31461421)
chr2 (124-198)||(35539663-35539740)
chr2 (123-198)||(35755554-35755629)
chr2 (207-250)||(41293393-41293436)
chr2 (115-198)||(43199357-43199440)
chr2 (152-195)||(44438920-44438963)
chr2 (156-198)||(3102636-3102678)
chr2 (152-198)||(5045238-5045284)
chr2 (116-190)||(12215758-12215832)
chr2 (124-198)||(29430699-29430772)
chr2 (143-197)||(32615364-32615418)
chr2 (152-198)||(35459853-35459899)
chr2 (115-165)||(37276722-37276772)
chr2 (152-198)||(40837509-40837555)
chr2 (122-188)||(42592292-42592358)
chr2 (150-196)||(43530190-43530236)
chr2 (161-198)||(15173469-15173506)
chr2 (119-176)||(29503131-29503188)
chr2 (152-197)||(40758967-40759012)
chr2 (152-197)||(44439441-44439486)
chr2 (158-198)||(3423855-3423895)
chr2 (158-198)||(6547853-6547893)
chr2 (126-198)||(9395073-9395145)
chr2 (162-198)||(9875548-9875584)
chr2 (152-196)||(11344365-11344409)
chr2 (126-198)||(11863705-11863777)
chr2 (205-248)||(27695747-27695788)
chr2 (129-201)||(28810431-28810503)
chr2 (97-141)||(32821809-32821853)
chr2 (152-188)||(34339076-34339112)
chr2 (115-179)||(37292391-37292455)
chr2 (158-198)||(38239638-38239678)
chr2 (151-187)||(41851245-41851281)
chr2 (89-169)||(43205281-43205361)
chr2 (162-198)||(44119727-44119763)
[»] chr7 (80 HSPs)
chr7 (115-198)||(5006553-5006636)
chr7 (118-197)||(27548207-27548286)
chr7 (115-190)||(40689030-40689105)
chr7 (128-198)||(2894760-2894830)
chr7 (120-198)||(3968247-3968322)
chr7 (118-198)||(27481341-27481421)
chr7 (167-248)||(32156887-32156969)
chr7 (119-198)||(28340444-28340523)
chr7 (97-176)||(29363483-29363562)
chr7 (107-196)||(1350278-1350367)
chr7 (89-198)||(28165034-28165143)
chr7 (152-197)||(39591548-39591593)
chr7 (89-190)||(44910555-44910656)
chr7 (97-197)||(4966100-4966200)
chr7 (107-195)||(23918903-23918991)
chr7 (118-190)||(30456497-30456569)
chr7 (134-198)||(35536050-35536114)
chr7 (123-190)||(34083577-34083644)
chr7 (96-179)||(44151505-44151588)
chr7 (120-190)||(1417215-1417285)
chr7 (152-198)||(7244645-7244691)
chr7 (112-190)||(12110311-12110389)
chr7 (118-196)||(20476557-20476635)
chr7 (152-190)||(30160971-30161009)
chr7 (116-178)||(31338471-31338533)
chr7 (121-186)||(9527140-9527205)
chr7 (107-184)||(17989059-17989136)
chr7 (118-198)||(1418374-1418454)
chr7 (118-198)||(2048088-2048167)
chr7 (117-169)||(5369737-5369789)
chr7 (158-198)||(7453485-7453525)
chr7 (118-190)||(27492746-27492818)
chr7 (116-196)||(38010659-38010739)
chr7 (152-184)||(46531490-46531522)
chr7 (118-198)||(47177579-47177659)
chr7 (119-198)||(992013-992092)
chr7 (107-194)||(1373576-1373663)
chr7 (119-198)||(3802187-3802266)
chr7 (98-177)||(7274424-7274503)
chr7 (118-237)||(30535468-30535586)
chr7 (155-198)||(31341137-31341180)
chr7 (151-198)||(39505900-39505947)
chr7 (158-197)||(42656459-42656498)
chr7 (119-198)||(45593767-45593846)
chr7 (87-141)||(514767-514821)
chr7 (164-198)||(1432060-1432094)
chr7 (152-190)||(2999142-2999180)
chr7 (96-198)||(3610765-3610867)
chr7 (118-196)||(5628613-5628691)
chr7 (112-198)||(7623081-7623167)
chr7 (152-198)||(9872814-9872860)
chr7 (152-190)||(19123200-19123238)
chr7 (116-190)||(21453245-21453319)
chr7 (117-195)||(22759132-22759210)
chr7 (156-198)||(27626209-27626251)
chr7 (160-198)||(28178912-28178950)
chr7 (116-178)||(28340889-28340951)
chr7 (129-191)||(30180001-30180063)
chr7 (121-179)||(31002723-31002781)
chr7 (152-198)||(33894566-33894611)
chr7 (156-198)||(35808989-35809031)
chr7 (152-198)||(43152983-43153029)
chr7 (162-196)||(44216866-44216900)
chr7 (96-198)||(44241803-44241904)
chr7 (159-197)||(45813268-45813306)
chr7 (95-176)||(3468579-3468660)
chr7 (152-197)||(21853197-21853242)
chr7 (117-185)||(23434204-23434273)
chr7 (149-190)||(24973895-24973936)
chr7 (115-160)||(28702731-28702776)
chr7 (125-197)||(46081977-46082050)
chr7 (158-195)||(46281218-46281255)
chr7 (118-187)||(46825052-46825121)
chr7 (164-196)||(4970881-4970913)
chr7 (157-197)||(5715124-5715164)
chr7 (118-146)||(18350754-18350782)
chr7 (123-171)||(29278629-29278677)
chr7 (95-143)||(40439052-40439100)
chr7 (116-192)||(47046153-47046229)
chr7 (158-198)||(49060483-49060523)
[»] scaffold0024 (1 HSPs)
scaffold0024 (118-198)||(27519-27599)
[»] scaffold0092 (1 HSPs)
scaffold0092 (107-190)||(40182-40265)
[»] scaffold0508 (1 HSPs)
scaffold0508 (117-198)||(9821-9902)
[»] scaffold0590 (1 HSPs)
scaffold0590 (156-198)||(1159-1201)
[»] scaffold0275 (1 HSPs)
scaffold0275 (156-198)||(2774-2816)
[»] scaffold0100 (1 HSPs)
scaffold0100 (119-198)||(42560-42638)
[»] scaffold0053 (1 HSPs)
scaffold0053 (115-190)||(5637-5712)
[»] scaffold0045 (1 HSPs)
scaffold0045 (119-196)||(84177-84254)
[»] scaffold0110 (1 HSPs)
scaffold0110 (119-175)||(4271-4327)


Alignment Details
Target: chr1 (Bit Score: 237; Significance: 1e-131; HSPs: 89)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 164 - 417
Target Start/End: Original strand, 4777378 - 4777635
Alignment:
Q  164 tttattttatcttttgctatagaaataacttatacttacgcgtttgtgctataagctgcacatataagttgtttatccaaata----gggctttattgaa 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||    
T  4777378 tttattttatcttttgctatagaaataacttatacttacgcgtttgtgctataagctgcacatataagttgtttatccaaatatatagggctttattgaa 4777477  T
Q  260 agttcttcttgctttttaggccgcgtttgttggattttgtttctgcgctggatgaagatgtagtcaaacgtgcttctgaaaaggcttttgagagtctacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4777478 agttcttcttgctttttaggccgcgtttgttggattttgtttctgcgctggatgaagatgtagtcaaacgtgcttctgaaaaggcttttgagagtctacc 4777577  T
Q  360 tgatatatcgaaagcaatttctgaactgagtgcattgaaaggcgttggtcctgctact 417  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4777578 tgatatatcgaaagcgatttctgaactgagtgcattgaaaggcgttggtcctgctact 4777635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 120 - 198
Target Start/End: Complemental strand, 49517091 - 49517013
Alignment:
Q  120 tagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||||| ||||  || ||||| |||||||||||||||||||||| ||||||||||||||||||    
T  49517091 tagcttatgaaaacagcttatagcttaaatgaaaacaatttgactttattttatcttttgttatagaaataacttatac 49517013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 44940386 - 44940280
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    |||||||| |||| | ||||||||||| ||||||||||| ||||||||||| ||| ||||||  ||||||||||||||||||||||||| ||||||  ||    
T  44940386 cttatttccacaacctcttcaggatagattatgaaaacaacttataacttatttgaaaacag--tgactttattttatcttttgctataaaaataagcta 44940289  T
Q  196 tacttacgc 204  Q
    ||| |||||    
T  44940288 tacatacgc 44940280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 30257754 - 30257646
Alignment:
Q  70 atgacatgttcatgtggtattttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttatt 169  Q
    |||||||||||||  | | |||||  |||||||||| ||||||| |||||||| ||||||||||| |||| | ||||  |||||||||||||||||||||    
T  30257754 atgacatgttcataagctgttttcagcttatttctataagccctccaggatagtttatgaaaacaacttaaagcttatatggaaacagtttgactttatt 30257655  T
Q  170 ttatctttt 178  Q
    |||||||||    
T  30257654 ttatctttt 30257646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 116 - 250
Target Start/End: Original strand, 33527192 - 33527325
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatacttacgcgtttgtgctat 215  Q
    |||||| |||||||||||||||||||  |||  || ||||||||||||| |||||||||||||| | |||||||| ||||| | || ||| || |||| |    
T  33527192 aggataacttatgaaaacagcttatagattatatgaaaacagtttgactgtattttatcttttgttttagaaatagcttattcataagcgcttatgctct 33527291  T
Q  216 aagctgcacatataagttgtttatccaaatagggc 250  Q
    |||||||| | ||||| |||||||||||| |||||    
T  33527292 aagctgca-aaataagctgtttatccaaacagggc 33527325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 37842396 - 37842482
Alignment:
Q  112 cttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| ||||||||||||||||| |||||| |||| | | | ||||||| ||||||||| ||||||||||||||||||| |||||||    
T  37842396 cttcaagatagcttatgaaaacaacttatagcttattcgaacacagtttaactttatttcatcttttgctatagaaatagcttatac 37842482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 96 - 198
Target Start/End: Original strand, 48830101 - 48830203
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    ||||||||||  ||| ||| || ||||||||||||||||| ||||| ||||  || ||| |||||||||||||||||||||| |  ||||||||||||||    
T  48830101 cttatttctattagctctttagaatagcttatgaaaacagtttatagcttatatgaaaatagtttgactttattttatctttggtaatagaaataactta 48830200  T
Q  196 tac 198  Q
    |||    
T  48830201 tac 48830203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 5150989 - 5150900
Alignment:
Q  89 ttttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctttt 178  Q
    ||||| ||||||||||| |||| ||||| |||||||||||||||||  ||| ||||||  || ||| |||||||||||||||||| ||||    
T  5150989 ttttcaacttatttctataagctcttcatgatagcttatgaaaacaaattacaacttaaatgaaaatagtttgactttattttatatttt 5150900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 9656676 - 9656600
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataa 191  Q
    |||||||||||||||| |||||||||| ||||  || ||| | ||| |||||||||||| |||||||||||||||||    
T  9656676 caggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttattttttgctatagaaataa 9656600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 70 - 198
Target Start/End: Complemental strand, 17269321 - 17269193
Alignment:
Q  70 atgacatgttcatgtggtattttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttatt 169  Q
    |||||||||||||| | | ||||  ||||||| |   |||| || |||||||||||||||||||| |||||  ||||  || ||||| ||||||||||||    
T  17269321 atgacatgttcatgagttgtttttaacttattaccgtaagctctccaggatagcttatgaaaacaacttattgcttatatgaaaacaatttgactttatt 17269222  T
Q  170 ttatcttttgctatagaaataacttatac 198  Q
    ||  |||||| | ||||||||||||||||    
T  17269221 ttcacttttgttctagaaataacttatac 17269193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 201
Target Start/End: Original strand, 4276683 - 4276766
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatactta 201  Q
    |||||||||||| ||||| ||||| ||||  || ||||||| ||||||||| |||||||||| ||||||||||  |||||||||    
T  4276683 gatagcttatgagaacaggttatagcttatgtgaaaacagtatgactttatattatcttttgttatagaaatagtttatactta 4276766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 4363651 - 4363745
Alignment:
Q  90 tttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctata 184  Q
    ||||| |||| ||| |||| | ||||||||||||||||||||| || ||||| ||||  || |||||||||||| |||||| |||||||| ||||    
T  4363651 tttcggcttacttcaacaaactcttcaggatagcttatgaaaataggttatagcttatatgaaaacagtttgacattatttaatcttttgttata 4363745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 15360883 - 15360837
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||    
T  15360883 aaacagtttgactttattttatcttttgttatagaaataactaatac 15360837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 96 - 190
Target Start/End: Complemental strand, 16322894 - 16322800
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||| | |||| |||||  ||||| |||||||||||||||||||||   || ||| ||||||||| |||||||||||||| |||| |||||    
T  16322894 cttatttccataagctcttcaaaatagcctatgaaaacagcttataacttctatgaaaatagtttgactatattttatcttttgatataaaaata 16322800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 124 - 198
Target Start/End: Original strand, 40304107 - 40304181
Alignment:
Q  124 ttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||||||  || ||||| | ||| |||||||||||||||| |||| ||||| |||||||    
T  40304107 ttatgaaaacagcttataacttatatgaaaacaatgtgattttattttatcttttgttatataaatagcttatac 40304181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 248
Target Start/End: Original strand, 10199456 - 10199584
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatacttacgcgtttgtgctataag 218  Q
    |||||||||||||| |||||||   |||   | ||| |||||||||||||||||||||  | ||||||||||||||||   || | |||| |||||||||    
T  10199456 atagcttatgaaaaaagcttatcgattatacgaaaatagtttgactttattttatcttgggttatagaaataacttatctataagtgtttatgctataag 10199555  T
Q  219 ctgcacatataagttgtttatccaaatagg 248  Q
    ||||| | |||||||||||| |||| ||||    
T  10199556 ctgca-aaataagttgtttacccaagtagg 10199584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 34179914 - 34179987
Alignment:
Q  113 ttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctataga 186  Q
    |||||||||| |||||||||||| ||||| ||||  |  ||||| |||||||||||||||||||||| ||||||    
T  34179914 ttcaggatagtttatgaaaacagtttatagcttagattaaaacaatttgactttattttatcttttgttataga 34179987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 49557172 - 49557084
Alignment:
Q  112 cttcaggatagcttat--gaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||  ||||||| |||||| ||||  || | ||  ||| |||||||||||||||||| ||||||||||||||||||    
T  49557172 cttcaggatagcttatatgaaaacaacttatagcttaaatgaatactatttaactttattttatcttttgttatagaaataacttatac 49557084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 4548744 - 4548684
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctttt 178  Q
    ||||||||||||||||||||||| ||||   |  |||||||||||||||||||||||||||    
T  4548744 gatagcttatgaaaacagcttatgacttgtataaaaacagtttgactttattttatctttt 4548684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 12477334 - 12477394
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctttt 178  Q
    |||||||||| |||| ||| |||| ||||| || |||||||||||||||||||||||||||    
T  12477334 gatagcttattaaaaaagcatatatcttacatgaaaacagtttgactttattttatctttt 12477394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 45205091 - 45205031
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctttt 178  Q
    ||||||||||||||||| ||| || ||||  |||||| |||||||||||||||||||||||    
T  45205091 gatagcttatgaaaacaacttctagcttatatggaaatagtttgactttattttatctttt 45205031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 46980182 - 46980254
Alignment:
Q  124 ttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    |||||||||||  ||||||||||  || |||||||||| ||||||||||||||||| |||| ||| |||||||    
T  46980182 ttatgaaaacaatttataacttatatgaaaacagtttgtctttattttatcttttgatataaaaacaacttat 46980254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 7273975 - 7274066
Alignment:
Q  107 aagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||| ||||| | ||| ||||| ||||||||||||||||   || ||||| ||||||||||||| |||||||| |||| ||||||| |||||    
T  7273975 aagctcttcaaggtagtttatggaaacagcttataacttgtatgaaaacaatttgactttatttcatcttttgttataaaaataacatatac 7274066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 195
Target Start/End: Original strand, 14737786 - 14737829
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    ||||| |||||||||||||||||||||| |||||||||||||||    
T  14737786 aaacaatttgactttattttatcttttgttatagaaataactta 14737829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 17631149 - 17631220
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||||| ||||||| | |  |||| || |||||||| ||||||||||||||||||| ||||||||||    
T  17631149 atagcttatgagaacagctcaaagtttacatgaaaacagttagactttattttatcttttgttatagaaata 17631220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 36641858 - 36641819
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  36641858 tttgactttattttatcttttgttatagaaataacttata 36641819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 43029450 - 43029520
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||||||||| | || |||||||| | ||||||||||||| |||||||||||||||| | ||||||||    
T  43029450 atagcttatgaaaatacctcataactta-taggaaacagtttgaatttattttatcttttgttgtagaaata 43029520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 45769785 - 45769863
Alignment:
Q  112 cttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataa 191  Q
    |||||||||||||||| |||| |||||||||||||  | |||| ||  ||| |||||||||||||||| |||||||||||    
T  45769785 cttcaggatagcttatcaaaatagcttataacttatcttgaaatag-atgagtttattttatcttttgttatagaaataa 45769863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 4200263 - 4200173
Alignment:
Q  107 aagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||||| ||||||| |||| |||||||   |||| ||||  || |||||  ||||||||||||||||||||| |||| ||||||||||||    
T  4200263 aagccctccaggatatcttacgaaaacaatatatagcttatatgaaaacaacttgactttattttatcttttgttataaaaataacttata 4200173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 194
Target Start/End: Complemental strand, 4622138 - 4622040
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactt 194  Q
    |||||||  |||||| || || |||||| |||| |||||||||||| ||||  || ||| ||||||| || |||| |||||||| ||||||||||||||    
T  4622138 cttattttcacaagctctccaagatagcatatggaaacagcttatagcttatatgaaaagagtttgaattcatttgatcttttgttatagaaataactt 4622040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 184
Target Start/End: Original strand, 15566683 - 15566749
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctata 184  Q
    ||||||||||||||| || ||||||||||   |  |||||||||||||||||||||||| |||||||    
T  15566683 gatagcttatgaaaatagattataacttaaaggagaacagtttgactttattttatcttatgctata 15566749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 190
Target Start/End: Original strand, 30259504 - 30259606
Alignment:
Q  89 ttttcgacttatttctacaagcccttcaggatagctt-atgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaa 187  Q
    ||||| ||||||||| | |||| || || |||||||| ||| |||||||||||| ||||  |  || ||||||||||||||||||| ||||| |||||||    
T  30259504 ttttcaacttatttccataagctctccatgatagctttatgcaaacagcttatagcttatatcaaagcagtttgactttattttatattttgttatagaa 30259603  T
Q  188 ata 190  Q
    |||    
T  30259604 ata 30259606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 189
Target Start/End: Original strand, 35080094 - 35080188
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaaca-gcttataacttacttggaaacagtttgactttattttatcttttgctatagaaat 189  Q
    |||||||| |||||| || || ||||||| ||||||| | |||||   ||||  ||||||||||||||||||||||||| ||||| |||||||||    
T  35080094 cttatttcgacaagctctccatgatagctcatgaaaaaaagcttagcgcttatatggaaacagtttgactttattttattttttgttatagaaat 35080188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 51695542 - 51695615
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataac 192  Q
    ||||||||||||||||| || ||||||||   | ||||| ||| ||||||||||||||||| |||||||||||||    
T  51695542 gatagcttatgaaaacatctgataacttatacgaaaacaattt-actttattttatcttttactatagaaataac 51695615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 4202210 - 4202259
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatactta 201  Q
    |||||| ||||||||  ||||||||||| |||||||||||||||||||||    
T  4202210 aaacagcttgactttggtttatcttttgttatagaaataacttatactta 4202259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 4215361 - 4215316
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||||    
T  4215361 aaacagtttgactttattttatcatttgctatcaaaataacttata 4215316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 23544686 - 23544767
Alignment:
Q  118 gatagcttatgaaaacagctta-taacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||| ||| || ||||  || ||||| |||||||| |||||||||||| | ||||||||| |||||||    
T  23544686 gatagcttatgaaaacagtttaatagcttatatgaaaacaatttgacttaattttatctttttccatagaaatagcttatac 23544767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 23895324 - 23895279
Alignment:
Q  153 aacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||| |||||||||||||||| |||||||||| |||||||    
T  23895324 aacagtttgaatttattttatcttttgttatagaaatagcttatac 23895279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 27738228 - 27738297
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaa 188  Q
    ||||||||||||||||  ||||| ||||  || ||||| |||||||||||||||||||||| | ||||||    
T  27738228 atagcttatgaaaacaaattatagcttatatgaaaacaatttgactttattttatcttttgttgtagaaa 27738297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 29007771 - 29007840
Alignment:
Q  126 atgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    ||||||||| |||||| ||||  || ||| |||||||||||| ||| ||||||| |||||||||||||||    
T  29007771 atgaaaacaacttatagcttatatgaaaatagtttgactttaatttttcttttgttatagaaataactta 29007840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 44936675 - 44936720
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataacttatactta 201  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||    
T  44936675 agtttgactttatcttatcttttgttatagaaataacttctactta 44936720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 1393069 - 1393145
Alignment:
Q  121 agcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||||||||||   |||||||||||| || |||||| || ||||||||||| |||||| |||| ||||| ||||||    
T  1393069 agcttatgaaaatgacttataacttacatgaaaacagatttactttattttaacttttgttatataaatagcttata 1393145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 198
Target Start/End: Complemental strand, 1730910 - 1730835
Alignment:
Q  122 gcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||| | |||||||||||| || ||| |||||||||||||||||||||| | || | ||||| |||||||    
T  1730910 gcttatgaaaataacttataacttacatg-aaatagtttgactttattttatctttggttaaaaaaatagcttatac 1730835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 10581125 - 10581185
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttg 179  Q
    |||||||||||||||| |||||| ||||  || ||| ||||||||||||||||||| ||||    
T  10581125 atagcttatgaaaacaacttatagcttaaatgaaaaaagtttgactttattttatcctttg 10581185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 13809987 - 13809943
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||| ||| ||||||||||||||||||||| |||||||||||||    
T  13809987 aaacaatttaactttattttatcttttgctaaagaaataacttat 13809943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 34619459 - 34619550
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatacttacgcgtttgtgctataagctgcacatataagttgtttatccaaa 244  Q
    ||||| ||| || ||||||||||||||| |||||||||  ||||||| || ||  || |||||||||||||| || |||| ||||||||||||    
T  34619459 aaacaatttaaccttattttatcttttgttatagaaatggcttatacataagcaattatgctataagctgcaaat-taagctgtttatccaaa 34619550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 34952238 - 34952158
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||| |||| | |||| | | ||||| ||| ||||||||||| ||| |||| |||||||| |||||||    
T  34952238 gatagcttatgaaaacaacttacagcttattcgaaaacaatttaactttattttaacttctgctctagaaatagcttatac 34952158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 37272630 - 37272694
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttg 179  Q
    |||||||  |||||||||||||||||| ||||  || |||||| |||||||||||||| ||||||    
T  37272630 caggataatttatgaaaacagcttatagcttatatgaaaacagattgactttattttaccttttg 37272694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 42556678 - 42556758
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||| |||||| ||||  |  ||  ||||||| ||||||| ||||||||  |||||||||||||||||    
T  42556678 gatagcttatgaaaacaacttatagcttatataaaagtagtttgattttatttcatcttttgtcatagaaataacttatac 42556758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 45999335 - 45999415
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||| |||||  | ||||| ||||  || || |||||||||||||| |||||||||| |||||||||| |||||||    
T  45999335 gatagcttacgaaaattggttatagcttatatgaaagcagtttgactttatcttatcttttgttatagaaatagcttatac 45999415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 289223 - 289180
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataacttatactta 201  Q
    ||||||||||||||||||||||||| | ||||| ||||||||||    
T  289223 tttgactttattttatcttttgctacaaaaatagcttatactta 289180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 1255479 - 1255550
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||| ||||||||||||||||||||   || ||| | |||||||| |||| ||||||| |||||||||||    
T  1255479 atagctaatgaaaacagcttataacttgtatgaaaagaatttgacttcatttcatcttttactatagaaata 1255550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 196
Target Start/End: Original strand, 4019635 - 4019716
Alignment:
Q  113 ttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||| ||||||||||||| ||||||||| ||||| || ||||  |||||||| |||||||| |||| ||||||||| ||||||    
T  4019635 ttcagaatagcttatgaaa-cagcttatagcttacatgaaaactatttgacttgattttatcatttg-tatagaaattacttat 4019716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 4338670 - 4338592
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||| ||||||||||||| | ||   | ||||||||||||||||||||||||| || | |||| |||||||||||    
T  4338670 atagcttattaaaacagcttatatcgtaag-gaaaacagtttgactttattttatcttctgttctagacataacttatac 4338592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 7218118 - 7218181
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctttt 178  Q
    |||||||| ||||||||||| |||||| ||||  || ||||| ||||||||||||||| |||||    
T  7218118 caggataggttatgaaaacaacttatagcttatatgaaaacaatttgactttattttacctttt 7218181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 190
Target Start/End: Original strand, 7262518 - 7262637
Alignment:
Q  71 tgacatgttcatgtggtattttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattt 170  Q
    ||||||||||||  | | |||||  |||||||| |||||| ||||||||||||||||||||| | ||||||  | |  || ||||||||| ||||||||     
T  7262518 tgacatgttcataagctgttttcaccttatttccacaagctcttcaggatagcttatgaaaagaacttatacttaaaatgaaaacagtttaactttatta 7262617  T
Q  171 tatcttttgctatagaaata 190  Q
    ||  |||||  |||||||||    
T  7262618 tacattttgtcatagaaata 7262637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 44031997 - 44032116
Alignment:
Q  69 aatgacatgttcatgtggtattttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttat 168  Q
    |||||||||| |||  | |||||||  || ||||| | |||| ||||| |||| |||| ||||| || ||||| ||||  || ||||| |||||||||||    
T  44031997 aatgacatgtccataagctattttcagctaatttccataagctcttcaagataacttaagaaaatagtttatagcttatatgaaaacaatttgactttat 44032096  T
Q  169 tttatcttttgctatagaaa 188  Q
    |||| |||||| ||||||||    
T  44032097 tttagcttttgttatagaaa 44032116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 50319274 - 50319235
Alignment:
Q  159 ttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  50319274 ttgactttattttatcttttgttatagaaatagcttatac 50319235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 1432490 - 1432409
Alignment:
Q  166 tattttatcttttgctatagaaataacttatacttacgcgtttgtgctataagctgcacatataagttgtttatccaaatagggc 250  Q
    ||||||||||||| ||||||||||| ||||||| || | | || |||||||||| |||   ||||| |||||||||||| |||||    
T  1432490 tattttatcttttactatagaaatagcttatacatatgtgcttatgctataagccgca---ataagctgtttatccaaacagggc 1432409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 8130459 - 8130409
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttat 168  Q
    ||||||||||||||||| |||||| ||||  || |||||||||||||||||    
T  8130459 gatagcttatgaaaacaacttatagcttatgtgaaaacagtttgactttat 8130409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 15437988 - 15437914
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||| |||||||||| ||| |  || | ||| |||||||||||||| ||||||| ||||| ||||||||||    
T  15437988 aggatagcctatgaaaacaacttctggctgatttgaaaacagtttgacttaattttattttttgttatagaaata 15437914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 23373371 - 23373409
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  23373371 aaacagattgactttattttatcttttgatatagaaata 23373409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 25006081 - 25006135
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttatttta 172  Q
    ||||||||||||||||| |||||| ||||  || ||||| |||||||||||||||    
T  25006081 gatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttatttta 25006135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 25944458 - 25944377
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||||||||||||||||| ||||||||||||| | ||||  |||||| ||||| |||| ||||  ||||||| || ||||||    
T  25944458 caggatagcttatgaaaaccgcttataacttacat-gaaatggtttgattttatcttattttttattatagaactagcttata 25944377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 36151586 - 36151632
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| |||||||||||||||||||||| ||| |||||| |||||||    
T  36151586 aaacaatttgactttattttatcttttgttattgaaatagcttatac 36151632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 39803967 - 39804013
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| |||||||||||||| ||||||| | ||||||||||||||||    
T  39803967 aaacaatttgactttattttgtcttttgttgtagaaataacttatac 39804013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 43722406 - 43722464
Alignment:
Q  162 actttattttatcttttgctatagaaataacttatacttacgcgtttgtgctataagct 220  Q
    ||||||||||||||| || |||| ||||| ||||||| || ||| ||||||||||||||    
T  43722406 actttattttatcttctgttatataaatagcttatacataagcgcttgtgctataagct 43722464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 48064327 - 48064261
Alignment:
Q  123 cttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaat 189  Q
    ||||||||| || |||||||||||     ||| ||||| ||||||||||||||||||||||||||||    
T  48064327 cttatgaaatcaacttataacttatacaaaaatagttttactttattttatcttttgctatagaaat 48064261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 190
Target Start/End: Complemental strand, 3924676 - 3924575
Alignment:
Q  89 ttttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaa 188  Q
    |||||| |||||||| | || | |||||||||||||||| |||||| || |||  |||   | |||||||||| ||| |||||||||| || ||||||||    
T  3924676 ttttcggcttatttccataaactcttcaggatagcttataaaaacaactaatagattatacgaaaacagtttgccttgattttatcttgtgttatagaaa 3924577  T
Q  189 ta 190  Q
    ||    
T  3924576 ta 3924575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 198
Target Start/End: Original strand, 6932987 - 6933088
Alignment:
Q  97 ttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||||| | |||| |||||||| | |||||||||| | || |||||||   || ||||| |||||||||||||||| ||||| |||| ||||  |||||    
T  6932987 ttatttccataagctcttcaggacaacttatgaaaagaactaataacttctatgaaaacaatttgactttattttatgttttgttataaaaatggcttat 6933086  T
Q  197 ac 198  Q
    ||    
T  6933087 ac 6933088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 17422985 - 17423066
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatc-ttttgctatagaaataacttatac 198  Q
    |||||| |||||||||| |||||| ||||  || || ||| |||||||||||||||| ||||| |||||||| | |||||||    
T  17422985 gatagcatatgaaaacaacttatagcttatatgaaatcagcttgactttattttatcgttttgttatagaaaaagcttatac 17423066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 17628611 - 17628550
Alignment:
Q  129 aaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||||||||| |||  || ||||| |||||||||| ||||||||||  ||||||||||    
T  17628611 aaaacagcttataatttatatgaaaacaatttgactttactttatcttttaatatagaaata 17628550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 25479606 - 25479525
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||||||||||||||||| |||||| | ||  || | ||| |||||| ||||||||||||| | |||||||| | ||||||    
T  25479606 aggatagcttatgaaaacaacttatagcctatatgaagacaatttgacgttattttatctttggttatagaaagatcttata 25479525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 30371166 - 30371105
Alignment:
Q  123 cttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctata 184  Q
    |||||||||||| |||||| ||||  || ||||| ||||| |||||||||||||||| ||||    
T  30371166 cttatgaaaacaacttatagcttatatgaaaacaatttgagtttattttatcttttgttata 30371105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 34380434 - 34380385
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatactta 201  Q
    |||||||||||||||||| ||||||||| | |||||||| ||||| ||||    
T  34380434 aaacagtttgactttattgtatcttttgttttagaaatagcttatgctta 34380385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 256
Target Start/End: Complemental strand, 36070268 - 36070136
Alignment:
Q  123 cttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatacttacgcgtttgtgctataagctgc 222  Q
    |||||||||||| |||||| ||||   | | ||| ||| |||||||||||||||||| |||| ||||| |  |||| || ||| || |||||||||||||    
T  36070268 cttatgaaaacaacttatagcttatccgaagacaatttaactttattttatcttttgttataaaaatagcccatacataagcgcttatgctataagctgc 36070169  T
Q  223 acatataagttgtttatccaaatagggctttatt 256  Q
    | || || | ||||||| |||| ||||| |||||    
T  36070168 aaat-taggctgtttatacaaacagggcgttatt 36070136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 38867914 - 38867959
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||| ||||||||||||| |||||||| |||||||||| ||||||    
T  38867914 aaacattttgactttatttaatcttttggtatagaaatagcttata 38867959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 40943465 - 40943510
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||||||||||||||| | |||| ||| ||||||    
T  40943465 aaacagtttgactttattttatcttttgttgtagagatatcttata 40943510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 46499935 - 46499980
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||| |||||||||||||||||||||  |||||||||| ||||||    
T  46499935 aaacaatttgactttattttatcttttcttatagaaatagcttata 46499980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 3887723 - 3887759
Alignment:
Q  162 actttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||||| |||||| |||||||    
T  3887723 actttattttatcttttgctattgaaatagcttatac 3887759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 190
Target Start/End: Complemental strand, 7028271 - 7028243
Alignment:
Q  162 actttattttatcttttgctatagaaata 190  Q
    |||||||||||||||||||||||||||||    
T  7028271 actttattttatcttttgctatagaaata 7028243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 190
Target Start/End: Original strand, 9572199 - 9572227
Alignment:
Q  162 actttattttatcttttgctatagaaata 190  Q
    |||||||||||||||||||||||||||||    
T  9572199 actttattttatcttttgctatagaaata 9572227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 11211138 - 11211062
Alignment:
Q  121 agcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||| || || || ||||  || ||| | ||| |||||||||||||||||| | |||||||||||||||    
T  11211138 agcttatgaaaatagtttttatcttatatgaaaaaaatttaactttattttatcttttgttctagaaataacttata 11211062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 15579505 - 15579426
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||| || ||||||||||| ||||| || ||||| ||||| ||||||| | |||| | |||||||||| |||||||    
T  15579505 gatagcttacgagaacagcttatagcttacatgaaaacaatttga-tttatttgaactttagttatagaaatagcttatac 15579426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 28467356 - 28467420
Alignment:
Q  120 tagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctata 184  Q
    ||||||||||||||| ||| || ||||  || ||| | |||||||||||||||||||||| ||||    
T  28467356 tagcttatgaaaacaacttgtagcttatatgaaaataatttgactttattttatcttttgttata 28467420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 37517275 - 37517319
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||| ||| |||||||||||| ||||| ||||||||||||||||    
T  37517275 aaacaatttaactttattttatattttggtatagaaataacttat 37517319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 42169632 - 42169668
Alignment:
Q  161 gactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||| || |||||||||||||||||    
T  42169632 gactttattttatcttctgttatagaaataacttata 42169668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 43420281 - 43420201
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||| | |||  ||||||  |  ||| |||||||||||||||||||||| | ||| |||||| |||||||    
T  43420281 gatagcttatgaaaataacttgcaacttatataaaaaaagtttgactttattttatctttcgttatggaaatagcttatac 43420201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 51190769 - 51190716
Alignment:
Q  203 gcgtttgtgctataagctgcacatataagttgtttatccaaatagggctttattga 258  Q
    ||||||||||||||||||  ||| |||||||||||||||||| ||| | |||||||    
T  51190769 gcgtttgtgctataagct--acaaataagttgtttatccaaacaggaccttattga 51190716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 4e-76; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 30 - 198
Target Start/End: Complemental strand, 3176062 - 3175894
Alignment:
Q  30 tttgtgccaacatataagcttgaataagtcggtccaaacaatgacatgttcatgtggtattttcgacttatttctacaagcccttcaggatagcttatga 129  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3176062 tttgtgccaacatataagctcgaataagtcggtccaaacaatgacatgtacatgtggtattttcgacttatttctacaagcccttcaggatagcttatga 3175963  T
Q  130 aaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| || |||||||    
T  3175962 aaacagcttataacttacttgaaaacaatttgactttattttatcttttgctatagaagtagcttatac 3175894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 118 - 244
Target Start/End: Complemental strand, 25885882 - 25885758
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatacttacgcgtttgtgctataa 217  Q
    |||| |||||||||||| |||||| |||||  | ||||| ||| ||||||||||||||||||||||||||| | || |||| || | ||||| ||| |||    
T  25885882 gataacttatgaaaacaacttatagcttacacgaaaacaatttaactttattttatcttttgctatagaaagagctaatacataagtgtttgcgctgtaa 25885783  T
Q  218 gctgcacatataagttgtttatccaaa 244  Q
    ||||  || ||||||||||||||||||    
T  25885782 gctg--caaataagttgtttatccaaa 25885758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 23819134 - 23819033
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    |||||||||| |||| ||||| |||||||||||||||||  ||||||||||  || |||||||||||||  |||||||  |||| ||| |||||||||||    
T  23819134 cttatttctataagctcttcaagatagcttatgaaaacatgttataacttatatgaaaacagtttgactacattttat-atttgttatggaaataactta 23819036  T
Q  196 tac 198  Q
    |||    
T  23819035 tac 23819033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 21157813 - 21157736
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttat 173  Q
    |||||||| | |||| |||||||||||| |||||||||| |||||| ||||| || |||||||||||||||| |||||    
T  21157813 cttatttccataagctcttcaggatagcatatgaaaacatcttatagcttacatgaaaacagtttgactttagtttat 21157736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 197
Target Start/End: Complemental strand, 29263415 - 29263314
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    |||||||| |||||| || |||||||||||||||||||| |||||  |||| ||| ||||| | | ||||||||||||| | || || ||||||||||||    
T  29263415 cttatttccacaagctctgcaggatagcttatgaaaacaacttatcgcttatttgaaaacaatgtaactttattttatcatctgttagagaaataactta 29263316  T
Q  196 ta 197  Q
    ||    
T  29263315 ta 29263314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 49219162 - 49219082
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| ||||||||||| |||||| ||||  || ||| | |||||||||||||||| ||||| ||||||||||||||||||    
T  49219162 gatagtttatgaaaacaacttatagcttatatgaaaataatttgactttattttatattttgttatagaaataacttatac 49219082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 54325084 - 54325156
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||| |||||| |||||||| ||||  || ||||||||||||||||||||||||||||  |||||||||    
T  54325084 gatagcttttgaaaatagcttatagcttatatgaaaacagtttgactttattttatcttttgtaatagaaata 54325156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 10192310 - 10192235
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||||| |||||||| |||||||||||  || ||||| |||||||||||| ||||||||| |||| |||||    
T  10192310 caggatagcttttgaaaacaacttataacttatatgaaaacaatttgactttattctatcttttgttataaaaata 10192235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 198
Target Start/End: Complemental strand, 53626795 - 53626717
Alignment:
Q  122 gcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatag--aaataacttatac 198  Q
    |||||||||||||||||||| ||||  || ||||| ||||| |||||||||||||||| |||||  |||||||||||||    
T  53626795 gcttatgaaaacagcttatagcttatatgaaaacattttgaatttattttatcttttgttatagaaaaataacttatac 53626717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 51630140 - 51630062
Alignment:
Q  112 cttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||| ||||||||||||||| |||||||| ||||  |  ||||| ||| ||||||||||||||||||||||| |||||    
T  51630140 cttcaagatagcttatgaaaatagcttatagcttatatcaaaacaatttaactttattttatcttttgctatataaata 51630062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 168 - 244
Target Start/End: Original strand, 34213691 - 34213765
Alignment:
Q  168 ttttatcttttgctatagaaataacttatacttacgcgtttgtgctataagctgcacatataagttgtttatccaaa 244  Q
    ||||||||||||||||||||||| |||||||  |||| |||||| |||||||||  || |||||||| |||||||||    
T  34213691 ttttatcttttgctatagaaatagcttatacacacgcatttgtgttataagctg--caaataagttgcttatccaaa 34213765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 195
Target Start/End: Complemental strand, 52735192 - 52735068
Alignment:
Q  70 atgacatgttcatgtggtattttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttatt 169  Q
    ||||||||| ||| || |||||| | |||||||| | |||| ||||| ||||||||| ||||||| | |||||||||  || ||  | ||||||||||||    
T  52735192 atgacatgtccatatgttattttag-cttatttccataagctcttcaagatagcttacgaaaacaacatataacttatatgaaagtaatttgactttatt 52735094  T
Q  170 ttatcttttgctatagaaataactta 195  Q
    |||||||||| || ||||||| ||||    
T  52735093 ttatcttttgttacagaaatagctta 52735068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 54327530 - 54327579
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatactta 201  Q
    ||||||||||||||| |||||||||||| |||||||| ||||||||||||    
T  54327530 aaacagtttgactttgttttatcttttgttatagaaacaacttatactta 54327579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 55870390 - 55870459
Alignment:
Q  120 tagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaat 189  Q
    ||||||||||||||| |||||| ||||  || ||||||||||||||||||| |||||||| |||| ||||    
T  55870390 tagcttatgaaaacaacttatagcttatgtgaaaacagtttgactttatttgatcttttgttataaaaat 55870459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 195
Target Start/End: Complemental strand, 23815359 - 23815316
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    |||||||||||| ||||||||||||||| |||||||||||||||    
T  23815359 aaacagtttgacattattttatcttttgttatagaaataactta 23815316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 24160545 - 24160612
Alignment:
Q  121 agcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaa 188  Q
    |||||||||||||| |||||| ||||| || ||| ||||||| ||||| |||||||||| ||||||||    
T  24160545 agcttatgaaaacaacttatagcttacatgaaaatagtttgaatttatattatcttttgttatagaaa 24160612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 36460605 - 36460530
Alignment:
Q  122 gcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||||||| ||||  || ||||||| || ||| || |||||||||| ||| |||||||||||||    
T  36460605 gcttatgaaaacagcttatagcttatatgaaaacagtgtggcttgatcttatcttttgttatcgaaataacttata 36460530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 117 - 196
Target Start/End: Original strand, 43372015 - 43372094
Alignment:
Q  117 ggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||||||||||||| ||| ||||| ||||  |  ||||||||||||| |||||||||||||| |||| ||||| |||||    
T  43372015 ggatagcttatgaaatcagtttatagcttatataaaaacagtttgactgtattttatcttttgttataaaaataccttat 43372094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 44119250 - 44119289
Alignment:
Q  159 ttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  44119250 ttgactttgttttatcttttgctatagaaataacttatac 44119289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 3155592 - 3155546
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||||||    
T  3155592 aaacaatttaactttattttatcttttgctatagaaatagcttatac 3155546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 198
Target Start/End: Original strand, 18628568 - 18628670
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    |||||||| | |||| || || |||| ||||||||||||| ||||||||||  |  ||||||||||||| ||||||  |||||| || |||||||| |||    
T  18628568 cttatttccataagctctccaagataacttatgaaaacagtttataacttatataaaaacagtttgactatatttttccttttgttaaagaaataattta 18628667  T
Q  196 tac 198  Q
    |||    
T  18628668 tac 18628670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 24929510 - 24929444
Alignment:
Q  124 ttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||||| |||||| |||   || |||||||| ||||||||||||||||||| ||||||||||    
T  24929510 ttatgaaaacaacttatagcttttatgaaaacagttagactttattttatcttttgttatagaaata 24929444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 30207620 - 30207697
Alignment:
Q  120 tagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||| |||||| ||||  || ||||||||||| |||||||||| ||||| ||||||| |||| |||||    
T  30207620 tagcttatgaaaacaacttatagcttatatgaaaacagtttga-tttattttattttttgttatagaactaacatatac 30207697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 198
Target Start/End: Original strand, 46415837 - 46415919
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||| | ||||||||||   || |||||||||||   |||||||||||||| ||| |||||| |||||||    
T  46415837 aggatagcttatgaaaagaacttataacttgtatgaaaacagtttgatcctattttatcttttgttattgaaatagcttatac 46415919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 49086010 - 49085940
Alignment:
Q  120 tagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||||||||| ||||||||||   || ||| |||||||| ||||||||||||||| |||| |||||    
T  49086010 tagcttatgaaaacaacttataacttgtatgaaaatagtttgacattattttatcttttgttatataaata 49085940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 49803200 - 49803154
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  49803200 aaacaatttaacttcattttatcttttgctatagaaataacttatac 49803154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 51044544 - 51044586
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  51044544 agtttgactttattttatcttttgttatagaaatagcttatac 51044586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 437480 - 437545
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctata 184  Q
    |||||||||||||||| |||| ||||||  || | ||| ||| |||||||||||||||||||||||    
T  437480 atagcttatgaaaacaacttaaaacttatatgaacacaatttaactttattttatcttttgctata 437545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 19422402 - 19422361
Alignment:
Q  157 gtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  19422402 gtttgactttattatatcttttgttatagaaataacttatac 19422361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 19429533 - 19429594
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttt 177  Q
    ||||||||||||||||| ||||||  |||||  |  ||||||||||||||||||||||||||    
T  19429533 aggatagcttatgaaaagagcttacgacttatataaaaacagtttgactttattttatcttt 19429594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 17884090 - 17884014
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    |||||||||||||||| || ||||||||     ||||| ||| |||||||||||||||||| |||||||||| ||||    
T  17884090 atagcttatgaaaacaactgataacttatacaaaaacaatttaactttattttatcttttgttatagaaatagctta 17884014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 28581957 - 28582021
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgcta 182  Q
    |||||||| |||||||| || ||||| ||  || ||| |||||||||||||||||||||||||||    
T  28581957 gatagcttttgaaaacaactcataacatatctgaaaatagtttgactttattttatcttttgcta 28582021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 30024689 - 30024645
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||||    
T  30024689 aaacaattttactttattttatcttttgttatagaaataacttat 30024645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 46797039 - 46796963
Alignment:
Q  120 tagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||||||||||||| |||||||||||  ||||||||  |||| ||||||||||| |||| |||  ||||| |||||    
T  46797039 tagcttatgaaaacaacttataacttatatggaaacatattgaatttattttatcgtttgttatgaaaatagcttat 46796963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 56480371 - 56480291
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| |||||||||||||||||||||||     ||||| ||| |||||||||| ||||||| ||| |||||| |||||||    
T  56480371 gatagtttatgaaaacagcttataacttatacataaacaatttaactttattttgtcttttgttatggaaatagcttatac 56480291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 927315 - 927260
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttat 173  Q
    |||| |||| ||||||| |||||||||||  |||||||| ||||||||||||||||    
T  927315 gataacttaagaaaacaacttataacttatatggaaacaatttgactttattttat 927260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 190
Target Start/End: Complemental strand, 4071904 - 4071833
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||| | |||| |||||| ||||  || ||| | |||||||||||||||||||||| ||||||||||    
T  4071904 atagcttatcataacaacttatagcttatatgaaaataatttgactttattttatcttttgttatagaaata 4071833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 4191729 - 4191682
Alignment:
Q  152 aaacagtttgactttatttt-atcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||| |||||||| |||||||||| |||||||    
T  4191729 aaacagtttgactttatttttatcttttgttatagaaatagcttatac 4191682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 6364171 - 6364092
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||  ||||||| ||||  || | | | ||| |||||||||||||||||| |||||||||| |||||||    
T  6364171 atagcttatgaaaattgcttatagcttatgtgaacagaatttcactttattttatcttttgttatagaaatagcttatac 6364092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 8130192 - 8130117
Alignment:
Q  123 cttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||| ||||| ||||  || ||| | ||||||||||| |||||||||| |||||||| |||| ||||    
T  8130192 cttatgaaaacagtttatagcttatatgaaaataatttgactttatgttatcttttgttatagaaagaactcatac 8130117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 198
Target Start/End: Original strand, 9319239 - 9319322
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||| |||||| |||||| |||||||| ||| |  | |||| | ||||||||||| ||||||||| ||||||||| ||||||||    
T  9319239 cagggtagcttgtgaaaatagcttatagcttccacgaaaactgattgactttattctatcttttgttatagaaattacttatac 9319322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 20936074 - 20936121
Alignment:
Q  143 cttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  20936074 cttacatgaaaatagtttgactttattttatcttttgttatagaaata 20936121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 244
Target Start/End: Original strand, 27043877 - 27044001
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatacttacgcgtttgtgctataa 217  Q
    ||||| |||| |||||| |||||| ||||   | ||||| ||| ||||||||||||| |||| |||| || || ||||||| || ||| | |||||||||    
T  27043877 gatagtttataaaaacatcttatagcttatacgaaaacaatttaactttattttatcctttgttatataagtaccttatacataagcgctagtgctataa 27043976  T
Q  218 gctgcacatataagttgtttatccaaa 244  Q
    ||||   | ||||||||||||||||||    
T  27043977 gctg--tagataagttgtttatccaaa 27044001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 238
Target Start/End: Complemental strand, 43824309 - 43824189
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatacttacgcgtttgtgcta 214  Q
    ||||||| |||| ||||| |||||||||||||  || ||| | ||||| |||| || ||||||||||| ||||||| ||||||  || ||| || |||||    
T  43824309 caggataacttacgaaaaaagcttataacttatatgaaaagaatttgattttaatt-atcttttgctaaagaaatagcttata-ataagcggttatgcta 43824212  T
Q  215 taagctgcacatataagttgttta 238  Q
    ||||||||| || |||||||||||    
T  43824211 taagctgcaaat-taagttgttta 43824189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 47119006 - 47119085
Alignment:
Q  112 cttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataa 191  Q
    ||||| |||||| |||||| ||| |||||| ||||  || ||||| ||| ||||| |||||||||||| |||||||||||    
T  47119006 cttcaagatagcatatgaatacaacttatagcttatatgaaaacaatttaactttgttttatcttttgatatagaaataa 47119085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 191
Target Start/End: Complemental strand, 52926217 - 52926178
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataa 191  Q
    ||||||||||||| |||||||||||||| |||||||||||    
T  52926217 aaacagtttgactatattttatcttttgttatagaaataa 52926178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 2996596 - 2996538
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctt 176  Q
    ||||||||||||||||| |||||||||||  |  ||||| ||||||| |||||||||||    
T  2996596 gatagcttatgaaaacaacttataacttatataaaaacaatttgactgtattttatctt 2996538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 3662337 - 3662299
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  3662337 aaacagtttgactttattttatcttttgttataggaata 3662299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 4798640 - 4798686
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| || ||||||||||||||||||| |||||||||| |||||||    
T  4798640 aaacatttagactttattttatcttttgatatagaaatagcttatac 4798686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 19670876 - 19670914
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  19670876 aaacagtttgaatttattttatcttttgatatagaaata 19670914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 28232566 - 28232496
Alignment:
Q  120 tagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||| ||||| ||| ||||| ||||  |||||| | ||||| || ||||||||||||||||||||||||    
T  28232566 tagcttctgaaagcagtttatagcttatatggaaataatttgatttgattttatcttttgctatagaaata 28232496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 34368866 - 34368820
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| ||||||||| |||||||||||| |||||||||| |||||||    
T  34368866 aaacaatttgactttgttttatcttttgttatagaaatagcttatac 34368820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 35743289 - 35743251
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataactt 194  Q
    |||||| ||||||||||||||||| ||||||||||||||    
T  35743289 agtttgcctttattttatcttttgttatagaaataactt 35743251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 44319974 - 44319912
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctttt 178  Q
    |||||||||||| |||| ||||| || ||||  || |||||||| ||||||||||||||||||    
T  44319974 aggatagcttatcaaaatagcttgtagcttatatgaaaacagttcgactttattttatctttt 44319912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 47970303 - 47970261
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||| ||||||||||||| |||||||||| |||||||    
T  47970303 agtttgacttcattttatcttttgttatagaaatagcttatac 47970261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 52645830 - 52645876
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||| || ||||||||||||| |||||||||| |||||||    
T  52645830 aaacagtttgaattgattttatcttttgttatagaaatagcttatac 52645876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 927499 - 927438
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttg 179  Q
    ||||||||||| |||||  ||||| ||||  || ||||||||||||||||||| ||||||||    
T  927499 gatagcttatgcaaacaagttatagcttatatgaaaacagtttgactttatttcatcttttg 927438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 18630704 - 18630631
Alignment:
Q  117 ggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||| |||||||| |||||| ||||  || ||||   ||||||||||||||||||||| ||| ||||||    
T  18630704 ggatagcttgtgaaaacaacttatagcttatatgaaaaccaattgactttattttatcttttgttattgaaata 18630631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 22471348 - 22471295
Alignment:
Q  124 ttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttt 177  Q
    ||||||||||| |||||||||||  || |||||||||| ||||| |||||||||    
T  22471348 ttatgaaaacaacttataacttatatgaaaacagtttgcctttaatttatcttt 22471295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 27623620 - 27623579
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||||||||||| |||| ||||| ||||||    
T  27623620 agtttgactttattttatcttttgttatacaaatatcttata 27623579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 31038917 - 31038994
Alignment:
Q  121 agcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||| ||||  ||||||||||||  || ||||| |||||||||||||||||| ||  | |||||||||| |||||    
T  31038917 agcttataaaaatggcttataacttatatgaaaacaatttgactttattttatctattattgtagaaataacgtatac 31038994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 52746887 - 52746948
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttg 179  Q
    |||||||||||||||||||||||  |||||    ||||| ||| ||||||||||||||||||    
T  52746887 gatagcttatgaaaacagcttatggcttacacaaaaacaatttaactttattttatcttttg 52746948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 1203208 - 1203244
Alignment:
Q  162 actttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||| |||||||||||||||| |||||||    
T  1203208 actttattttatgttttgctatagaaatagcttatac 1203244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 2703025 - 2702985
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||| ||||||||||||||||||||||| ||||| |||||    
T  2703025 agtttaactttattttatcttttgctatataaatagcttat 2702985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 3176209 - 3176249
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| ||||||| |||||||| ||||||||||||||||||    
T  3176209 tttgattttatttaatcttttgttatagaaataacttatac 3176249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 11802556 - 11802488
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaa 187  Q
    |||||||||||||||| ||| || ||||  ||  || | |||||||||||||||||||||| |||||||    
T  11802556 atagcttatgaaaacaacttgtagcttatgtgagaaaaatttgactttattttatcttttgttatagaa 11802488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 194
Target Start/End: Original strand, 13216295 - 13216327
Alignment:
Q  162 actttattttatcttttgctatagaaataactt 194  Q
    ||||||||||||||||||||||| |||||||||    
T  13216295 actttattttatcttttgctataaaaataactt 13216327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 19040202 - 19040242
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||||||| ||| ||||||| |||||||    
T  19040202 tttgactttattttatctttttctaaagaaatagcttatac 19040242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 21193981 - 21193941
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||||||| ||||| ||||| |||||||    
T  21193981 tttgactttattttatcttttactataaaaatagcttatac 21193941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 27671919 - 27671959
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||||| | | ||||||||||||||    
T  27671919 tttgactttattttatcttttgttgtggaaataacttatac 27671959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 28623276 - 28623232
Alignment:
Q  154 acagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||| || ||||||||||||||| |||| |||||||||||||    
T  28623276 acagtttaacattattttatcttttgttatataaataacttatac 28623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 40174584 - 40174520
Alignment:
Q  120 tagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctata 184  Q
    |||||||||||||||||||||| |||   || ||||| ||| |||||| ||||| ||||||||||    
T  40174584 tagcttatgaaaacagcttatagcttttatgaaaacaatttaactttaatttattttttgctata 40174520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 42321936 - 42322004
Alignment:
Q  128 gaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||||| ||||||| |||  || ||||| ||||||||||||||||| |||| |||| ||||| |||||    
T  42321936 gaaaacaacttataatttatatgaaaacaatttgactttattttatcatttgttataaaaatagcttat 42322004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 96 - 190
Target Start/End: Complemental strand, 14295551 - 14295457
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||| ||||| |||| || |||||||||||| |||||||||||||| ||||  || |||||||||||||||||||||||||||| ||||||||||    
T  14295551 cttacttctaaaagctctccaggatagcttacgaaaacagcttatagcttatatgaaaacagtttgactttattttatcttttgttatagaaata 14295457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 28586811 - 28586885
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||||  | |||||||||||||| |||  || |||||||||||||||||||||||||||| ||||||||||    
T  28586811 aggatagctcgtcaaaacagcttataatttatatgaaaacagtttgactttattttatcttttgttatagaaata 28586885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 9202789 - 9202874
Alignment:
Q  112 cttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||| |||| ||||||||||||||||||  ||||  || ||||| ||| ||||||||||||||||||||| ||||||| ||||||    
T  9202789 cttcaagataacttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatcttttgctacagaaatagcttata 9202874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 12407711 - 12407788
Alignment:
Q  121 agcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||   |||||||||||| || |||||| || |||||||||||||||||| |||||||||| |||||||    
T  12407711 agcttatgaaaatgacttataacttacatgaaaacagatttactttattttatcttttgttatagaaatagcttatac 12407788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 26209454 - 26209539
Alignment:
Q  112 cttcaggatagcttatgaaaacagcttataactta-cttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| |||||||||||||||||||||||| ||||  ||| ||||| || ||||||||||||||  ||| ||||||||||||||||||    
T  26209454 cttcatgatagcttatgaaaacagcttatagcttatattgaaaacaattggactttattttatc--ttgttatagaaataacttatac 26209539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 89 - 192
Target Start/End: Complemental strand, 18875413 - 18875310
Alignment:
Q  89 ttttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaa 188  Q
    ||||| |||| |||| | |||| || ||||||| ||||| |||||||||||||||||   || || || |||||||||||||| ||||||| ||||||||    
T  18875413 ttttcaacttgtttccataagctctccaggatatcttattaaaacagcttataacttgtatgaaatcaatttgactttattttgtcttttgatatagaaa 18875314  T
Q  189 taac 192  Q
    ||||    
T  18875313 taac 18875310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 41277397 - 41277456
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttt 177  Q
    ||||||||||||||||| ||| |||||||  || ||||||||||||||||||||||||||    
T  41277397 gatagcttatgaaaacaacttttaacttatatgaaaacagtttgactttattttatcttt 41277456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 29117011 - 29117057
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||    
T  29117011 aaacagtttgactttattttatcttttgttatagaaataacatatac 29117057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 32172682 - 32172604
Alignment:
Q  112 cttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||| |||||||||||||||||||||||| ||||  || |||||  ||||||| ||||||||||||| | ||||||||    
T  32172682 cttcatgatagcttatgaaaacagcttatagcttatatgtaaacaacttgacttcattttatcttttgttgtagaaata 32172604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 11054165 - 11054085
Alignment:
Q  162 actttattttatcttttgctatagaaataacttatacttacgcgtttgtgctataagctgcacatataagttgtttatccaa 243  Q
    |||||||||||||||||  |||||||||| ||||||| || |||||| |||||||||| | | || ||||||||||||||||    
T  11054165 actttattttatcttttattatagaaatagcttatacataagcgtttatgctataagccggaaat-taagttgtttatccaa 11054085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 196
Target Start/End: Complemental strand, 14257506 - 14257410
Alignment:
Q  100 tttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    |||| |||||| || || ||||| ||||||||||| |||||||||||  |||||||| ||||| |||||||| ||||| |  ||||||||| |||||    
T  14257506 tttccacaagctctccaagatagtttatgaaaacaccttataacttatatggaaacattttgaatttattttgtctttcgacatagaaatatcttat 14257410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 32059642 - 32059694
Alignment:
Q  124 ttatgaaaacagcttataacttacttggaaacagtttgactttattttatctt 176  Q
    |||||||||||||||||| ||||  || |||||||||||||||||||||||||    
T  32059642 ttatgaaaacagcttatagcttatatgaaaacagtttgactttattttatctt 32059694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 16889757 - 16889678
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||||||||| |||   |  |||||||||||||| | ||||||||||| ||| |||||| |||||||    
T  16889757 atagcttatgaaaacagcttatagcttctataaaaacagtttgacttaagtttatcttttgttatggaaatagcttatac 16889678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 18704084 - 18704162
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||| |||||| ||||  |  ||| || |||||||||||| |||||||| ||||||||||||||||||    
T  18704084 atagcttatgaaaacaacttatagcttatataaaaatagcttgactttattt-atcttttgttatagaaataacttatac 18704162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 26516423 - 26516344
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||||| ||||||||||  || ||  |||||||||||||||||||| ||| || |||| || ||||||    
T  26516423 gatagcttatgaaaacagtttataacttatatgaaagtagtttgactttattttatctattgttagagaactagcttata 26516344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 204
Target Start/End: Complemental strand, 30217126 - 30217019
Alignment:
Q  97 ttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||||| | |||| || ||||||||||||||||| |||||||||  |||| || ||  | || ||||||||||||||| |||| ||||||||  |||||    
T  30217126 ttatttccataagctctccaggatagcttatgaaagcagcttatagattacgtgaaattaattagactttattttatctcttgcgatagaaatggcttat 30217027  T
Q  197 acttacgc 204  Q
    || |||||    
T  30217026 acatacgc 30217019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 41957496 - 41957551
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttatttt 171  Q
    |||||||||||||||||||||||||||||||| || ||||| ||| |||| |||||    
T  41957496 aggatagcttatgaaaacagcttataacttacatgaaaacaatttaacttcatttt 41957551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 985622 - 985576
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||||||||||| ||| |||||||| |||||    
T  985622 aaacagtttgactttattttatcttttgttatggaaataacatatac 985576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 12425594 - 12425504
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatacttacgcgttt 208  Q
    |||||||| ||||||||||||||| ||||   | ||||| ||| ||||||||||||||||| ||||| |||||  |||||| || ||||||    
T  12425594 gatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttactatataaatagtttatacataagcgttt 12425504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 35135747 - 35135789
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  35135747 agtttgactttattttatcttttgttatagaaatatcttatac 35135789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 39594830 - 39594753
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    |||| ||||||||||||||||| ||||||   | ||||| ||| ||||||||||||||||| ||||||||||| |||||    
T  39594830 gatatcttatgaaaacagcttacaacttatgcgaaaacaattt-actttattttatctttttctatagaaatagcttat 39594753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 42583166 - 42583092
Alignment:
Q  124 ttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||  |||||  | ||||| ||| ||||||||| |||||||| |||||||||| |||||||    
T  42583166 ttatgaaaacagcttatcccttacacgaaaacaatttaactttatttcatcttttgttatagaaataccttatac 42583092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 190
Target Start/End: Complemental strand, 4855750 - 4855649
Alignment:
Q  89 ttttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaa 188  Q
    |||||| |||||||||  |||| |||  |||||| ||||||||||| |||||||||||  ||  |||| ||| |||||||||||| ||||| |||| |||    
T  4855750 ttttcggcttatttctgtaagctctttgggatagtttatgaaaacaacttataacttatatgataacaatttaactttattttattttttgttataaaaa 4855651  T
Q  189 ta 190  Q
    ||    
T  4855650 ta 4855649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 7096213 - 7096254
Alignment:
Q  157 gtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||||||||| |||||||||| |||||||    
T  7096213 gtttgactttattttatcttttgttatagaaatagcttatac 7096254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 14599353 - 14599453
Alignment:
Q  121 agcttatgaaaacagcttataacttacttggaaacagtttgactttattttatc--ttttgctatagaaataacttatacttacgcgtttgtgctataag 218  Q
    |||||||  ||||| |||||||||||  || |||||||||||||| ||||||||  ||||| |||||||||| |||| || || | |||| |||||||||    
T  14599353 agcttatcgaaacaacttataacttatatgaaaacagtttgacttaattttatcagttttgttatagaaatagcttaaacataagtgtttatgctataag 14599452  T
Q  219 c 219  Q
    |    
T  14599453 c 14599453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 36639556 - 36639479
Alignment:
Q  107 aagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctata 184  Q
    |||| ||||| ||||||||||||||||||  ||||||||   || ||||| ||||| |||||||||||||||| ||||    
T  36639556 aagctcttcaagatagcttatgaaaacagtctataacttgtatgaaaacattttgattttattttatcttttgttata 36639479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 4014515 - 4014551
Alignment:
Q  162 actttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||||||||||||||| |||||||    
T  4014515 actttattttatcttttgctatagaaatagcttatac 4014551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 12595538 - 12595578
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  12595538 tttgaatttattttatcttttgctatagaaatagcttatac 12595578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 35095862 - 35095902
Alignment:
Q  150 ggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||| |||||||||||||||||||||| ||||||||||    
T  35095862 ggaaacaatttgactttattttatcttttgttatagaaata 35095902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 36539780 - 36539708
Alignment:
Q  107 aagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttg 179  Q
    |||| |||||| ||| ||||| |||||| |||||| ||||  || |||||| |||||||||||||||||||||    
T  36539780 aagctcttcagaataacttataaaaacaacttatagcttatatgaaaacaggttgactttattttatcttttg 36539708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 37063125 - 37063193
Alignment:
Q  122 gcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||||| |||||   ||||||  || ||| |||||||||||||||||||||||| ||||||||||    
T  37063125 gcttatgaaaccagctggcaacttatatgaaaatagtttgactttattttatcttttgttatagaaata 37063193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 39750157 - 39750105
Alignment:
Q  127 tgaaaacagcttataacttacttggaaacagtttgactttattttatcttttg 179  Q
    ||||||||| ||||||||||  || ||| ||||||||||||||||||||||||    
T  39750157 tgaaaacaggttataacttatatgaaaatagtttgactttattttatcttttg 39750105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 12595758 - 12595857
Alignment:
Q  89 ttttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaa 188  Q
    ||||| ||| ||||||| |||| ||| | | |||||||||||| ||||| |||  |||  || ||||| ||| |||||||||||||||||| ||||||||    
T  12595758 ttttcaactgatttctataagctctttaaggtagcttatgaaaccagctcatagtttatatgaaaacaatttaactttattttatcttttgttatagaaa 12595857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 27772686 - 27772745
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctttt 178  Q
    |||||||||||||||| ||||||||||| ||| ||||||||  ||||| |||||| ||||    
T  27772686 atagcttatgaaaacaacttataacttatttgaaaacagttatactttgttttatatttt 27772745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 35960439 - 35960365
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||||||||||| || ||||||  |||  || ||| |||||||||||||||||||||||  ||||||||||    
T  35960439 caggatagcttatgaaatcaacttatagtttatatg-aaatagtttgactttattttatcttttattatagaaata 35960365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 197
Target Start/End: Original strand, 41981799 - 41981834
Alignment:
Q  162 actttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||||| |||||||||||||||||    
T  41981799 actttattttatcttttgatatagaaataacttata 41981834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 42569032 - 42569099
Alignment:
Q  123 cttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||| ||||||| ||||| ||||   | ||||| || ||||||||||||||||||||||||||||||    
T  42569032 cttatcaaaacagattatagcttatacgaaaacaattagactttattttatcttttgctatagaaata 42569099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 10280657 - 10280695
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  10280657 aaacagtttgactttattctatcttttgttatagaaata 10280695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 10303790 - 10303752
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  10303790 aaacaatttgactttattttatcttttgttatagaaata 10303752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 28578881 - 28578835
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||| |||||||||||||||||| || |||||||||| |||||||    
T  28578881 aaacagcttgactttattttatcttatgttatagaaatagcttatac 28578835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 194
Target Start/End: Original strand, 37588385 - 37588483
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactt 194  Q
    |||||||| | |||| || ||| ||| |||||||||||| |||||| ||||  || ||||  ||||| || ||||||||||||  ||||||||||||||    
T  37588385 cttatttccataagctctccagaataacttatgaaaacaacttatagcttatatgaaaactttttgatttgattttatcttttattatagaaataactt 37588483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 39823171 - 39823241
Alignment:
Q  121 agcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataa 191  Q
    |||||||||||||| ||| || ||||  || ||  |||||||||||||||||||||||| |||| ||||||    
T  39823171 agcttatgaaaacaacttgtagcttatatgaaagtagtttgactttattttatcttttgttatataaataa 39823241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 196
Target Start/End: Original strand, 9703292 - 9703365
Alignment:
Q  123 cttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    |||||||||||| ||| || ||||  || ||  |||||||||||||||||||| ||| || |||||||||||||    
T  9703292 cttatgaaaacaacttgtagcttatatgaaatgagtttgactttattttatctcttgttacagaaataacttat 9703365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 11615497 - 11615452
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||| |||||||||||||||||||||| |||| ||||| ||||||    
T  11615497 aaacaatttgactttattttatcttttgttataaaaatagcttata 11615452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 32969204 - 32969241
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataactta 195  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  32969204 tttgactttattttatcttttgttatagaaacaactta 32969241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 39128627 - 39128582
Alignment:
Q  153 aacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||| |||||||||||||||||||||| ||||||| || |||||||    
T  39128627 aacaatttgactttattttatcttttgttatagaattagcttatac 39128582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 1636842 - 1636882
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||||||||||||||||||| || || |||||||||||||    
T  1636842 agtttgactttattttatcttgtgatacagaaataacttat 1636882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 7853649 - 7853609
Alignment:
Q  150 ggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||| ||| |||||||||||||||||| ||||||||||    
T  7853649 ggaaacaatttaactttattttatcttttgttatagaaata 7853609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 114 - 142
Target Start/End: Complemental strand, 8089831 - 8089803
Alignment:
Q  114 tcaggatagcttatgaaaacagcttataa 142  Q
    |||||||||||||||||||||||||||||    
T  8089831 tcaggatagcttatgaaaacagcttataa 8089803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 10907402 - 10907322
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||| ||||| |||||||||||||  |||  || ||  ||||||| ||||||||| | || ||||||||||||||||||||    
T  10907402 gataacttataaaaacagcttatagattatatgaaagtagtttgattttattttaccattagctatagaaataacttatac 10907322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 198
Target Start/End: Original strand, 12460000 - 12460127
Alignment:
Q  70 atgacatgttcatgtggtattttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttatt 169  Q
    ||||||||||||| || | |||| | |||||||  | |||| || || |||||||| |||| ||| ||||||  ||| ||| ||||| | | |||| |||    
T  12460000 atgacatgttcatatgttgtttttggcttattttcataagctctgcaagatagcttgtgaagacaacttatagtttatttgaaaacaatataactt-att 12460098  T
Q  170 ttatcttttgctatagaaataacttatac 198  Q
    |||||||||| |||||||||| |||||||    
T  12460099 ttatcttttgttatagaaatagcttatac 12460127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 12975370 - 12975298
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||||||| |||||||||| ||||  || ||||| ||||| ||||||||||  |||| ||||| ||||    
T  12975370 gatagcttatgaacacagcttatagcttatatgaaaacaatttgattttattttattctttgttataggaata 12975298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 195
Target Start/End: Original strand, 15402877 - 15402953
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    |||| ||||||||||| |||||| |||  ||| ||||| || |||| |||||||||||||| ||  |||||||||||    
T  15402877 ataggttatgaaaacaacttatagcttttttgaaaacatttcgactctattttatcttttgttaatgaaataactta 15402953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 20922817 - 20922785
Alignment:
Q  160 tgactttattttatcttttgctatagaaataac 192  Q
    ||||||||||||||||||| |||||||||||||    
T  20922817 tgactttattttatctttttctatagaaataac 20922785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 25705677 - 25705729
Alignment:
Q  89 ttttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttata 141  Q
    ||||| ||||||||  ||||| ||||  |||||||||||||||||||||||||    
T  25705677 ttttcaacttattttcacaagaccttttggatagcttatgaaaacagcttata 25705729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 27106014 - 27106050
Alignment:
Q  162 actttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  27106014 actttattttatcttttgttatagaaatgacttatac 27106050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 29590828 - 29590868
Alignment:
Q  159 ttgactttattttatcttttgctatagaaataacttatact 199  Q
    ||||||||||||||||||||| |||||||||| | ||||||    
T  29590828 ttgactttattttatcttttgttatagaaatagcatatact 29590868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 33459026 - 33459062
Alignment:
Q  162 actttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  33459026 actttattttgtcttttgttatagaaataacttatac 33459062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 38766909 - 38766965
Alignment:
Q  137 ttataacttacttggaaacagtttgactttattttatcttttgctatagaaataact 193  Q
    ||||||||||  || ||| ||||| ||||||||||| |||||| |||||||||||||    
T  38766909 ttataacttagatgaaaatagtttaactttattttagcttttgttatagaaataact 38766965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 39105487 - 39105407
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||| ||||| ||||   | ||||| ||| |||| |||| || ||| |||||||||||| |||||||    
T  39105487 gatagcttatgaaaacagattatagcttatacgaaaacaatttaacttcatttcatatttagctatagaaatagcttatac 39105407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 40048371 - 40048407
Alignment:
Q  162 actttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||| |||||||| |||||||||    
T  40048371 actttattttatcttttgttatagaaacaacttatac 40048407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 40097484 - 40097536
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatacttacgc 204  Q
    ||||| ||| ||| ||||||||||| || |||||||||||||||||| |||||    
T  40097484 aaacaatttaactctattttatcttctgttatagaaataacttatacatacgc 40097536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 70 - 190
Target Start/End: Complemental strand, 25100114 - 25099994
Alignment:
Q  70 atgacatgttcatgtggtattttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttatt 169  Q
    ||||||||||||| || ||||||| ||||||||||| |||| ||| | ||||||||||||||||| ||||||||||   || ||||| ||||||| ||||    
T  25100114 atgacatgttcatttgctattttcaacttatttctataagctctttaagatagcttatgaaaacaacttataacttctatgaaaacaatttgactctatt 25100015  T
Q  170 ttatcttttgctatagaaata 190  Q
    | || ||||||| ||||||||    
T  25100014 tcatattttgctttagaaata 25099994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 29274281 - 29274356
Alignment:
Q  123 cttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||| ||||| ||||  || ||||| ||||||||||||||||||||||||||||||||| |||||||    
T  29274281 cttatgaaaacagtttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatac 29274356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 33500499 - 33500608
Alignment:
Q  89 ttttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaa 188  Q
    ||||||||||||||| | |||  || || ||||||||  | |||||||||||||||||  | |||||||||||| |||| ||||||||||| ||||||||    
T  33500499 ttttcgacttatttccataagttctacatgatagcttgcggaaacagcttataacttatattgaaacagtttgattttactttatcttttgttatagaaa 33500598  T
Q  189 taacttatac 198  Q
    || |||||||    
T  33500599 tagcttatac 33500608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 198
Target Start/End: Original strand, 33068604 - 33068688
Alignment:
Q  115 caggatagcttatgaaaac-agcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| ||||||||||||  |||||||| |||| ||| |||||||||||  ||||||||||||||| ||||||||||||||||||    
T  33068604 caggacagcttatgaaaaatagcttatatcttatttgaaaacagtttgatattattttatcttttgttatagaaataacttatac 33068688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 32976004 - 32975921
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||| |||||  |||   | ||||||||||||||||||||||| ||||| || |||||||||||||||    
T  32976004 caggatagcttatgaaaacaacttattgcttctattgaaacagtttgactttattttatattttgttacagaaataacttatac 32975921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 281893 - 281974
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||||||||||||| |||||||||| ||||  || |||||  ||||||||||||||||||||| ||||| |||| ||||||    
T  281893 aggatagcttatgaacacagcttatagcttatatgaaaacaagttgactttattttatcttttgttataggaatagcttata 281974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 10154242 - 10154174
Alignment:
Q  120 tagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaa 188  Q
    |||| |||||||  |||||||||||||  || ||||||||||||||||||||||||||| |||||||||    
T  10154242 tagcctatgaaagtagcttataacttatatgaaaacagtttgactttattttatctttttctatagaaa 10154174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 196
Target Start/End: Complemental strand, 4006738 - 4006659
Alignment:
Q  117 ggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    |||||||||||||||||| |||||| ||||  |  ||||| ||||||||||||||||| |||| |||||||||| |||||    
T  4006738 ggatagcttatgaaaacaacttatagcttatataaaaacaatttgactttattttatcatttgttatagaaatatcttat 4006659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 9093606 - 9093681
Alignment:
Q  121 agcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||||||||||||||||||| ||||   | ||||| ||| |||||||||||||||||| |||||||||| |||||    
T  9093606 agcttatgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttgatatagaaatagcttat 9093681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 24836280 - 24836326
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||    
T  24836280 aaacaatttgactttattttatcttttgttatagaaataacttatac 24836326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 195
Target Start/End: Complemental strand, 1403019 - 1402942
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    |||||||||||||||||  ||||| ||||  || ||| ||||| |||||||||||||||||| |||||||||| ||||    
T  1403019 gatagcttatgaaaacaatttatagcttatatgaaaatagtttaactttattttatcttttgttatagaaatagctta 1402942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 3155202 - 3155138
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttg 179  Q
    ||||||| |||||||||| ||||||||  |||  |||||||||||||||||| ||||||||||||    
T  3155202 caggatatcttatgaaaatagcttataggttatatggaaacagtttgactttgttttatcttttg 3155138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 10728621 - 10728573
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatactt 200  Q
    ||||| ||| |||||||||||||||||||| ||||||||||||||||||    
T  10728621 aaacaatttaactttattttatcttttgctttagaaataacttatactt 10728573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 33787792 - 33787864
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||| ||||||||||||||||||||||||  || || || ||||||||| |||||| ||||| ||||||||||    
T  33787792 gataacttatgaaaacagcttataacttatatgaaatcaatttgactttgttttatattttgttatagaaata 33787864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 2027455 - 2027530
Alignment:
Q  120 tagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    |||||||||| |||||||||||  |||  || ||| |||||||||||||||||||||||| |||| ||||| ||||    
T  2027455 tagcttatgagaacagcttataggttatatgaaaatagtttgactttattttatcttttgttataaaaatagctta 2027530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 4420607 - 4420560
Alignment:
Q  151 gaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||    
T  4420607 gaaacagtttgactttattttatcttttgttatagaagtagcttatac 4420560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 10016567 - 10016488
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||||||||  ||||  ||  |||||||| | |||||||||||||||| | |||||||| |||||||    
T  10016567 atagcttatgaaaacagcttatggcttatatgagaacagtttaaatttattttatcttttggtttagaaatagcttatac 10016488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 5328958 - 5328920
Alignment:
Q  157 gtttgactttattttatcttttgctatagaaataactta 195  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  5328958 gtttgactttattttatcttttgttatagaaataactta 5328920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 198
Target Start/End: Original strand, 9559634 - 9559668
Alignment:
Q  164 tttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||||||||||||||||||    
T  9559634 tttattttatcttttgctatagaaataacttatac 9559668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 22742392 - 22742310
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||||| ||||| |||| |||||||| ||||  || ||||| ||||||||||||||||| |||| |||| ||||| ||||||    
T  22742392 caggataacttataaaaatagcttatagcttatatgaaaacaatttgactttattttatcctttgttatacaaatagcttata 22742310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 194
Target Start/End: Complemental strand, 26491719 - 26491621
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactt 194  Q
    |||||||| | |||| ||||||| |||||||||| || ||  |||| || |  || ||||||  |||||||||||||||||||||||||||||| ||||    
T  26491719 cttatttccataagctcttcaggttagcttatgataatagtatatatctcatatgaaaacaggatgactttattttatcttttgctatagaaatgactt 26491621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 323823 - 323754
Alignment:
Q  129 aaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||| |||| ||||||||  || ||||||||||| |||||||||||||||  |||||||||| |||||||    
T  323823 aaaatagctcataacttatatgaaaacagtttgaatttattttatcttttaatatagaaatagcttatac 323754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 30865469 - 30865424
Alignment:
Q  154 acagtttgactttattttatcttttgctatagaaataacttatact 199  Q
    |||||||||||||||||||||||||| |||||||||| || |||||    
T  30865469 acagtttgactttattttatcttttgttatagaaatagctcatact 30865424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 33911324 - 33911400
Alignment:
Q  113 ttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||||| ||||||||||||||||||| |||  ||| | |||||| ||||||||| |||||||| |||| |||||    
T  33911324 ttcaggatagtttatgaaaacagcttataaattatatgg-atcagtttaactttatttgatcttttgttataaaaata 33911400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 195
Target Start/End: Original strand, 4247113 - 4247185
Alignment:
Q  123 cttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    ||||||||||||||||||||||||  || ||||||    ||| |||||||||||||| |||||||||| ||||    
T  4247113 cttatgaaaacagcttataacttatatgaaaacagaccaactctattttatcttttgttatagaaatagctta 4247185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 7354227 - 7354155
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||| ||||||||||||||| || ||||  || ||| |||| || |||||||||||||||| ||||||||||    
T  7354227 gatagtttatgaaaacagcttgtatcttatatgaaaatagttcgattttattttatcttttgttatagaaata 7354155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 24782084 - 24782004
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||||| |||| |||  |||||||||||||  || ||||| ||||| || ||||||||||||| |||||||||| |||||    
T  24782084 aggatagtttattaaagtagcttataacttatatgaaaacaatttgatttgattttatcttttgttatagaaatagcttat 24782004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 25426216 - 25426136
Alignment:
Q  95 acttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatct 175  Q
    ||||||||||| ||   || ||||||||||||| |||| |||||||| ||||| || || || ||||||||||||||||||    
T  25426216 acttatttctataaattctccaggatagcttataaaaatagcttatagcttacatgaaagcaatttgactttattttatct 25426136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 28531628 - 28531668
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  28531628 tttgactttattttatcttttgttatataaataacttatac 28531668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 3785748 - 3785811
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgcta 182  Q
    ||||||||  ||||||||||||| ||||   | ||||||||| |||||||||||||||||||||    
T  3785748 atagcttacaaaaacagcttatagcttatacgaaaacagtttaactttattttatcttttgcta 3785811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 32513816 - 32513770
Alignment:
Q  149 tggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  32513816 tggaaatagtttgactttattttat-ttttgttatagaaataacttat 32513770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 326473 - 326403
Alignment:
Q  121 agcttatgaaaacagcttataacttacttggaaacagtttgacttt-attttatcttttgctatagaaata 190  Q
    |||||||||||| || ||||| ||||  || |||||||||||||||  |||||||||||| ||||||||||    
T  326473 agcttatgaaaaaagattatagcttaaatgtaaacagtttgactttccttttatcttttgttatagaaata 326403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 167 - 197
Target Start/End: Original strand, 2023725 - 2023755
Alignment:
Q  167 attttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||||||||||||||||||    
T  2023725 attttatcttttgctatagaaataacttata 2023755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 2514687 - 2514645
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||||||  |||||||||| |||||||    
T  2514687 agtttgactttattttatcttttattatagaaatagcttatac 2514645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 20671946 - 20671992
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| |||||||||||||||||||||| | |||||||| |||||||    
T  20671946 aaacaatttgactttattttatcttttgatctagaaatagcttatac 20671992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 21959710 - 21959668
Alignment:
Q  159 ttgactttattttatcttttgctatagaaataacttatactta 201  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||    
T  21959710 ttgactttattttatcttttgttatggaaatagcttatactta 21959668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 24774747 - 24774709
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  24774747 aaacagtttgactttattttatattttgttatagaaata 24774709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 29940778 - 29940736
Alignment:
Q  159 ttgactttattttatcttttgctatagaaataacttatactta 201  Q
    ||||||||||||||||||||| |||||||| | ||||||||||    
T  29940778 ttgactttattttatcttttgttatagaaaaagcttatactta 29940736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 198
Target Start/End: Complemental strand, 31672047 - 31672013
Alignment:
Q  164 tttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||| ||||||||||||||||||    
T  31672047 tttattttatcttttgttatagaaataacttatac 31672013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 34429771 - 34429817
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||| ||||||||||||||| ||  ||||||||||||||||||    
T  34429771 aaacagttagactttattttatctcttattatagaaataacttatac 34429817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 198
Target Start/End: Original strand, 34544539 - 34544577
Alignment:
Q  160 tgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  34544539 tgactttagtttatcttttgttatagaaataacttatac 34544577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 1498004 - 1497943
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttg 179  Q
    ||||| ||||||||||  ||||||||| |  || ||||||||||||||||||||| ||||||    
T  1498004 gatagtttatgaaaacttcttataactcatatgaaaacagtttgactttattttaccttttg 1497943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 198
Target Start/End: Complemental strand, 8010428 - 8010300
Alignment:
Q  70 atgacatgttcatgtggtattttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataactt-acttggaaacagtttgactttat 168  Q
    |||||||||||||  | |||||||   ||||||||| |||  || ||||||| ||||| ||||||||||||||||| |  || ||  || ||||||||||    
T  8010428 atgacatgttcataagctattttcagtttatttctataagttctccaggataacttattaaaacagcttataacttaaaatgaaagtagattgactttat 8010329  T
Q  169 tttatcttttgctatagaaataacttatac 198  Q
    ||||| | ||| |||||||||| |||||||    
T  8010328 tttat-tgttgttatagaaatagcttatac 8010300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 11393877 - 11393833
Alignment:
Q  150 ggaaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  11393877 ggaaacagtttgattttattttatcttttgc-ataaaaataactta 11393833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 27857364 - 27857319
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||||||||||||||| || | || |||||||||    
T  27857364 aaacagtttgactttattttatcttttgttacaaaagtaacttata 27857319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 30784542 - 30784501
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||||||||||| |||||||| | ||||||    
T  30784542 agtttgactttattttatcttttgttatagaaaaagcttata 30784501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 31324508 - 31324399
Alignment:
Q  89 ttttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaa 188  Q
    |||| |||||||||  | |||| ||||| |||||||||||||  ||||||||| ||||| || ||| ||||| || |||||| | | || | |||| |||    
T  31324508 ttttagacttattttaataagctcttcatgatagcttatgaatgcagcttatagcttacatgaaaatagtttaaccttatttcaccattggttataaaaa 31324409  T
Q  189 taacttatac 198  Q
    ||||||||||    
T  31324408 taacttatac 31324399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 33067202 - 33067102
Alignment:
Q  97 ttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    |||||||||||||| || || ||||||||||||||||| |||||| | ||  || ||||| || |||||||||||  |||||  ||||| |||| |||||    
T  33067202 ttatttctacaagctctccaagatagcttatgaaaacaacttatagc-taaatgaaaacaattcgactttattttcgcttttcttatagtaatagcttat 33067104  T
Q  197 ac 198  Q
    ||    
T  33067103 ac 33067102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 507199 - 507163
Alignment:
Q  162 actttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  507199 actttattttatcttttgttatagaaataatttatac 507163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 2206569 - 2206533
Alignment:
Q  162 actttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||| |||| |||||||||||||    
T  2206569 actttattttatcttttgttataaaaataacttatac 2206533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 14492327 - 14492259
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctata 184  Q
    |||||| ||||||||||||||||||| |||   |  ||||| |||||||| ||||||||||||| ||||    
T  14492327 aggataacttatgaaaacagcttatagcttgtatcaaaacaatttgacttcattttatcttttggtata 14492259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 31807890 - 31807964
Alignment:
Q  115 caggatagcttatgaaaacag--cttataacttacttggaaacagtttgactttattttatcttttgctatagaaa 188  Q
    |||||||||||||||||||||  ||||||| ||| |  |||||| |||||||||||||||| ||||| | ||||||    
T  31807890 caggatagcttatgaaaacagctcttataattta-tatgaaacattttgactttattttattttttgttctagaaa 31807964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 33817823 - 33817879
Alignment:
Q  123 cttatgaaaacagcttataac-ttacttggaaacagtttgactttattttatctttt 178  Q
    |||||||||||| |||||||| |||| || |||||| || |||||||||||||||||    
T  33817823 cttatgaaaacaacttataactttacatgaaaacaggtttactttattttatctttt 33817879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 96 - 190
Target Start/End: Original strand, 159998 - 160091
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||| |||||| ||| ||||||||||||||||||| ||||||||||| |  ||  ||||||||||||||||||||||||||||||| ||||    
T  159998 cttatttccacaagctctttaggatagcttatgaaaacatcttataactta-tatgattcagtttgactttattttatcttttgctataggaata 160091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 192
Target Start/End: Complemental strand, 8799431 - 8799354
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataac 192  Q
    ||||||||||||| |||||| ||||||| |||  |||||| |||||||||||||||||||||||| ||||||||||||    
T  8799431 caggatagcttataaaaacaccttataatttatctggaaatagtttgactttattttatcttttgttatagaaataac 8799354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 1930030 - 1929969
Alignment:
Q  162 actttattttatcttttgctatagaaataacttatacttacgcgtttgtgctataagctgca 223  Q
    ||||||||||||||||| ||||||||||||||||||| || ||| |||||||||||||||||    
T  1930030 actttattttatctttttctatagaaataacttatacataagcgcttgtgctataagctgca 1929969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 29699268 - 29699201
Alignment:
Q  127 tgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactt 194  Q
    ||||||||||||||||||||  ||  |||| |||||||||||||||||||||| ||||||||||||||    
T  29699268 tgaaaacagcttataacttagatgacaacattttgactttattttatcttttgttatagaaataactt 29699201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 115 - 198
Target Start/End: Original strand, 34080310 - 34080393
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||| ||||||||||||||||| ||||   || ||||||||||||| ||||||||||||| || ||||||| |||||||    
T  34080310 caggatagcgtatgaaaacagcttatagcttatacggtaacagtttgacttcattttatcttttgttaaagaaatagcttatac 34080393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 107 - 196
Target Start/End: Complemental strand, 4763952 - 4763863
Alignment:
Q  107 aagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    |||| |||||||||||||||  ||||||||||||| ||||  || |||| |||||| |||||||||||||||| | | ||||||||||||    
T  4763952 aagctcttcaggatagcttagaaaaacagcttatagcttatgtgaaaacggtttgaatttattttatcttttgttgtcgaaataacttat 4763863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 30013244 - 30013175
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctata 184  Q
    ||||||||||||||||||||||||||| ||||  ||||||||||||||||| |||| | |||||| ||||    
T  30013244 caggatagcttatgaaaacagcttatagcttatatggaaacagtttgacttaatttgaccttttgttata 30013175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 40728499 - 40728543
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  40728499 aaacagtttgactttattttatcttttgttatagaaataacttat 40728543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 198
Target Start/End: Complemental strand, 42597420 - 42597344
Alignment:
Q  122 gcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||| |||||| ||| | || ||||| ||| |||||||||||||||||| |||||||||| |||||||    
T  42597420 gcttatgaaaacaacttatagcttgcatgaaaacaattttactttattttatcttttgttatagaaatagcttatac 42597344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 6864507 - 6864562
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatc 174  Q
    |||||||||||||||| |||||||||||| || ||| |||||||||||||||||||    
T  6864507 atagcttatgaaaacaacttataacttacatgaaaatagtttgactttattttatc 6864562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 199
Target Start/End: Complemental strand, 26820184 - 26820141
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataacttatact 199  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  26820184 agtttgactttattttatcttttgttatagaaataacttatact 26820141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 34770917 - 34770854
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttg 179  Q
    ||||||||||||||||||| |||||| ||||  || ||||| ||||||||||||||||||||||    
T  34770917 aggatagcttatgaaaacaacttatagcttaaatgaaaacaatttgactttattttatcttttg 34770854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 6509319 - 6509426
Alignment:
Q  87 tattttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctataga 186  Q
    |||||||  |||||||| | |||| || ||||||||||||||||||||||||||| ||||  |  | ||| |||||||||||||||||  ||| ||||||    
T  6509319 tattttcaccttatttcaataagctctccaggatagcttatgaaaacagcttatagcttatataaatacaatttgactttattttatc--ttgttataga 6509416  T
Q  187 aataacttat 196  Q
     |||||||||    
T  6509417 tataacttat 6509426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 8578627 - 8578573
Alignment:
Q  87 tattttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttata 141  Q
    |||||||| ||||||||||||||| || | |||||||||||||||||||||||||    
T  8578627 tattttcggcttatttctacaagctctccgggatagcttatgaaaacagcttata 8578573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 12361210 - 12361136
Alignment:
Q  123 cttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||||||||||||||||| ||||  || ||||| |||||||| |||||||||||   |||||||||||||||||    
T  12361210 cttatgaaaacagcttatagcttatatgaaaacaatttgacttcattttatctttatttatagaaataacttata 12361136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 1470898 - 1470983
Alignment:
Q  113 ttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||| ||||| |||||||||||||||||| ||||  || ||  | |||||||||||||||||||||  |||||||||| |||||||    
T  1470898 ttcatgataggttatgaaaacagcttatagcttatatgaaagtaatttgactttattttatcttttattatagaaatagcttatac 1470983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 9700017 - 9699944
Alignment:
Q  125 tatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||| ||| ||| ||||| |||||| |||||||| |||||| ||| |||||| |||||||    
T  9700017 tatgaaaacagcttataatttatttgaaaacaatttgaccttattttaacttttgttatcgaaatagcttatac 9699944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 10727218 - 10727142
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||||||| |||||| |||||||||||  || ||||| ||||| ||||||| ||||||||||||||||||| |||||    
T  10727218 atagcttat-aaaacaacttataacttatgtgaaaacactttgaatttatttcatcttttgctatagaaatagcttat 10727142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 29973106 - 29973025
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||||||||||||||||| |||||| ||||  || ||| ||||||||||||||||| ||| || || ||||||| ||||||    
T  29973106 aggatagcttatgaaaacaacttatagcttatgtgaaaatagtttgactttattttaccttgtgttaaagaaatagcttata 29973025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 190
Target Start/End: Complemental strand, 2606041 - 2605970
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||||||||||||||||  |||||  | |||| |||||||||| |||||||||||||  |||||||||    
T  2606041 atagcttatgaaaacagcttaagacttatatagaaatagtttgacttaattttatcttttgtcatagaaata 2605970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 5071019 - 5071094
Alignment:
Q  123 cttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||| |||| || |||  || ||| |||||||||||||||||| |||| ||||||||| |||||||||    
T  5071019 cttatgaaaacatcttacaagttatatgaaaaaagtttgactttattttatattttactatagaaacaacttatac 5071094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 11795114 - 11795035
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||| ||||||||||||||  || ||||||| |||||||||| ||| |||||  ||||||| | |||||||    
T  11795114 atagcttatgaaatcagcttataacttatatgaaaacagtgtgactttattgtatgttttgtcatagaaaaagcttatac 11795035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 178
Target Start/End: Complemental strand, 2093324 - 2093242
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctttt 178  Q
    |||||||||| || | ||||||||||||| ||||||||| |||||| ||||   | ||||  |||||||||||||||||||||    
T  2093324 cttatttctataaacgcttcaggatagctaatgaaaacaacttatagcttaaaagaaaaccatttgactttattttatctttt 2093242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 3537112 - 3537158
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||    
T  3537112 aaacaatttgactttattttatcttttgctatagaaattgcttatac 3537158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 4558823 - 4558741
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||| |||||||||||| | ||  || ||| | ||| |||||||||||||||||  |||||||||| |||||||    
T  4558823 aggatagcttatggaaacagcttatagcatatatgaaaataatttaactttattttatcttttattatagaaatagcttatac 4558741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 190
Target Start/End: Original strand, 7918798 - 7918892
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||| |||||| || || ||||||||||||||||| |||||| |||||  | ||| | ||| |||||||||||| ||| | ||||||||||    
T  7918798 cttatttccacaagctctacaagatagcttatgaaaacaacttatagcttacaagaaaaaaatttaactttattttatttttcgatatagaaata 7918892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 12224940 - 12225026
Alignment:
Q  112 cttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||| ||||||||||  |||||||| |  |  || ||| ||||||||||||||||||||||||   ||||||||||||||||    
T  12224940 cttcaggatggcttatgaaagtagcttataccccatatgaaaatagtttgactttattttatcttttgtcttagaaataacttatac 12225026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 27465362 - 27465316
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||| || |||||||||||||||||||||||| |||||||    
T  27465362 aaacagtttgatttgattttatcttttgctatagaaatagcttatac 27465316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 27728066 - 27728140
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||||||||||||| || |||  |||  || ||| |||||||||||||||||||||||  ||||||||||    
T  27728066 aggatagcttatgaaaacaactaatactttatatgaaaatagtttgactttattttatctttttttatagaaata 27728140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 29592576 - 29592638
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttt 177  Q
    |||||||||||| |||||||||||||| ||||   ||||||| ||| ||||||||||||||||    
T  29592576 caggatagcttacgaaaacagcttatagcttataaggaaacaattttactttattttatcttt 29592638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 7514600 - 7514495
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatacttacgcg-tttgtgctataa 217  Q
    |||||||||||||||||||| || ||||  || ||||| ||  || ||||||||  |||||||||||||||| ||||||| || | | ||||||||||||    
T  7514600 atagcttatgaaaacagcttgtagcttatatgaaaacaattgaacattattttagtttttgctatagaaatagcttatacataagggctttgtgctataa 7514501  T
Q  218 gctgca 223  Q
     |||||    
T  7514500 tctgca 7514495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 10437874 - 10437837
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaat 189  Q
    |||||||||||||||||||||||||||| |||||||||    
T  10437874 aaacagtttgactttattttatcttttgttatagaaat 10437837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 13652267 - 13652158
Alignment:
Q  89 ttttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaa 188  Q
    ||||| |||||||||   |||| || ||| ||||||||| ||||||  ||||||||||  || ||||| ||| |||| |||  |||||||||||||||||    
T  13652267 ttttctacttatttccttaagctctccagaatagcttataaaaacaatttataacttatatgaaaacaatttcacttcattccatcttttgctatagaaa 13652168  T
Q  189 taacttatac 198  Q
    || |||||||    
T  13652167 tagcttatac 13652158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 13710910 - 13710801
Alignment:
Q  89 ttttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaa 188  Q
    ||||| |||||||||   |||| || ||| ||||||||| ||||||  ||||||||||  || ||||| ||| |||| |||  |||||||||||||||||    
T  13710910 ttttctacttatttccttaagctctccagaatagcttataaaaacaatttataacttatatgaaaacaatttcacttcattccatcttttgctatagaaa 13710811  T
Q  189 taacttatac 198  Q
    || |||||||    
T  13710810 tagcttatac 13710801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 31862518 - 31862437
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||| |||||||||||| |||||| ||||   |  || ||||||||||||| |||||||||| ||| |||||||||||||    
T  31862518 aggataacttatgaaaacatcttatagcttatacgagaatagtttgactttatattatcttttgttattgaaataacttata 31862437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 38561711 - 38561670
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  38561711 agtttgactttattttatcttttgttatataaataacttata 38561670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 11119082 - 11119118
Alignment:
Q  154 acagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||||||||||||||||||||| ||||||||||    
T  11119082 acagtttgactttattttatcttttgttatagaaata 11119118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 30988039 - 30988119
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||  |||||||||||||||||| ||  || |||||||| |||||||||| | ||| ||| ||||||| ||||||    
T  30988039 gatagcttacaaaaacagcttataacttatttaaaagcagtttgattttattttatatcttgttattgaaataaattatac 30988119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 39392744 - 39392780
Alignment:
Q  154 acagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||||||||||||||||||||| ||||||||||    
T  39392744 acagtttgactttattttatcttttgttatagaaata 39392780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 18930674 - 18930602
Alignment:
Q  169 tttatcttttgctatagaaataacttatacttacgcgtttgtgctataagctgcacatataagttgtttatccaa 243  Q
    ||||||||||| |||| || || ||||||| ||||| ||||||||||||||||  || |||||||| ||||||||    
T  18930674 tttatcttttgttatataactagcttatacatacgcatttgtgctataagctg--caaataagttgcttatccaa 18930602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 28769387 - 28769466
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||||||||| ||||   | ||| |||||||||| |||||||  |||| ||||| |||| |||||||    
T  28769387 atagcttatgaaaacagcttatagcttataagaaaatagtttgacttaattttatagtttgttataggaatagcttatac 28769466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 35374425 - 35374492
Alignment:
Q  123 cttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||| ||| ||||| ||||  || ||||| ||| |||||||||||||||| ||||||||||||    
T  35374425 cttatgaaatcagattatagcttatatgaaaacaatttaactttattttatctttcgctatagaaata 35374492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 188
Target Start/End: Complemental strand, 2100788 - 2100758
Alignment:
Q  158 tttgactttattttatcttttgctatagaaa 188  Q
    |||||||||||||||||||||||||||||||    
T  2100788 tttgactttattttatcttttgctatagaaa 2100758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 2699324 - 2699250
Alignment:
Q  123 cttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||| ||||| ||| ||||||||  || ||| ||||| |||||||||||| ||||| | |||||||||||||||    
T  2699324 cttataaaaacggctaataacttatatgaaaatagtttaactttattttatattttgttgtagaaataacttata 2699250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 9836901 - 9836979
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    |||||||||||||||||| || |||||||  || ||| |||||||||||| ||||||  ||| |||| ||||| |||||    
T  9836901 gatagcttatgaaaacaggttgtaacttatatgaaaatagtttgactttactttatcagttgttataaaaatagcttat 9836979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 116 - 198
Target Start/End: Original strand, 11188200 - 11188282
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||| |||| || |||||||| |  |  ||| ||||||  |||||||||||||||| |||||||| |||||||||    
T  11188200 aggatagcttatcaaaatagtttataactaatataaaaatagtttggttttattttatcttttgttatagaaacaacttatac 11188282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 14482191 - 14482153
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  14482191 aaacaatttgactttattttatcttttgttatagaaata 14482153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 18356303 - 18356265
Alignment:
Q  157 gtttgactttattttatcttttgctatagaaataactta 195  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  18356303 gtttaactttattttatcttttgctatagaaacaactta 18356265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 139
Target Start/End: Original strand, 18931316 - 18931366
Alignment:
Q  89 ttttcgacttatttctacaagcccttcaggatagcttatgaaaacagctta 139  Q
    ||||||||||||||| |||||  ||  ||||||||||||||||||||||||    
T  18931316 ttttcgacttatttcaacaagttctctaggatagcttatgaaaacagctta 18931366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 26215481 - 26215439
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| |||||||||||||||||| |||||||||| |||||||    
T  26215481 agtttaactttattttatcttttgttatagaaatagcttatac 26215439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 178
Target Start/End: Original strand, 28784820 - 28784902
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctttt 178  Q
    ||||||| ||||||| ||  | ||||||||||||||| |||||| |||| |  |  ||||| |||||||||||||||||||||    
T  28784820 cttatttttacaagctctctaagatagcttatgaaaatagcttacaactgatatcaaaacaatttgactttattttatctttt 28784902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 926470 - 926405
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataacttatacttacgcgtttgtgctataagctgca 223  Q
    ||||||||||||||||||| || |||||||||| ||||| | || ||| || |||||| |||||||    
T  926470 tttgactttattttatcttgtgttatagaaatagcttattcatatgcgcttatgctattagctgca 926405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 6918260 - 6918305
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||||||||||||||  |||| ||||| ||||||    
T  6918260 aaacagtttgactttattttatcttttattatataaatagcttata 6918305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 198
Target Start/End: Complemental strand, 10114466 - 10114433
Alignment:
Q  165 ttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||||||||| |||||||    
T  10114466 ttattttatcttttgctatagaaatagcttatac 10114433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 11000642 - 11000687
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||| |||||||||||||||||||||| ||| |||||| ||||||    
T  11000642 aaacaatttgactttattttatcttttgttatggaaatagcttata 11000687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 11813130 - 11813207
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttat 173  Q
    |||||||||  |||| ||| | |||||||||||||||||| |||||| |||  ||||||||||||   ||||||||||    
T  11813130 cttatttctgtaagctcttgaagatagcttatgaaaacagattataaattatatggaaacagttttcttttattttat 11813207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 27320307 - 27320259
Alignment:
Q  149 tggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||| ||||||||||||||| |||||||||||||| |||| |||||||    
T  27320307 tggaaatagtttgactttattt-atcttttgctataggaatagcttatac 27320259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 33209268 - 33209345
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||||||| |||| ||||||||  |||  || |||||||| |||||||||||||||||   |||||||||| |||||    
T  33209268 atagcttataaaaatagcttatagtttatatgaaaacagttcgactttattttatctttcattatagaaatagcttat 33209345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 184
Target Start/End: Complemental strand, 34551146 - 34551077
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctata 184  Q
    ||||||| |||| ||||||| |||||||||||  || ||||| |||||||| || |||||||||| ||||    
T  34551146 caggataacttaagaaaacaacttataacttaaatgaaaacaatttgacttgatgttatcttttgttata 34551077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 34788505 - 34788554
Alignment:
Q  149 tggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||||||||||||||| |  ||| ||||| |||||||    
T  34788505 tggaaacagtttgactttattttatctttggtcataaaaatagcttatac 34788554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 35298524 - 35298605
Alignment:
Q  118 gatagcttatgaaaacagcttataacttac-ttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||| ||||||  |||  ||| |||| ||||| ||||||||||||||||| ||  |||||| |||||||    
T  35298524 gatagcttatgaaaacaacttatagtttatattgaaaactgtttggctttattttatcttttgttactgaaatagcttatac 35298605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 35534942 - 35534987
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||||||||||||||||||| |||||  |||||||||| ||||||    
T  35534942 aaacagtttgactttattttaacttttattatagaaatagcttata 35534987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 40280286 - 40280331
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||| ||| |||||||||||||||||| | |||||||||||||||    
T  40280286 aaacaattttactttattttatcttttgttgtagaaataacttata 40280331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 787147 - 787211
Alignment:
Q  112 cttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctt 176  Q
    ||||| |||| ||||||||||||| ||||| ||||  ||  |||| |||||||||||||||||||    
T  787147 cttcaagataacttatgaaaacagtttatagcttatatgataacaatttgactttattttatctt 787211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 2364560 - 2364592
Alignment:
Q  158 tttgactttattttatcttttgctatagaaata 190  Q
    ||||||||||||||||||||||||||| |||||    
T  2364560 tttgactttattttatcttttgctataaaaata 2364592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 2698782 - 2698738
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    |||||||| ||||||||||||  |||||||||||||||| |||||    
T  2698782 aaacagttcgactttattttactttttgctatagaaatagcttat 2698738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 12291697 - 12291733
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaa 188  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  12291697 aaacagtttgactttatgttatcttttgttatagaaa 12291733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 16210933 - 16211013
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| || |||||||| |||||| ||||  || ||||| | | ||||||||||||| ||| ||||||||||| |||||||    
T  16210933 gataggttttgaaaacaacttatagcttatatgaaaacaatgtaactttattttatcatttactatagaaatagcttatac 16211013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 20672761 - 20672729
Alignment:
Q  152 aaacagtttgactttattttatcttttgctata 184  Q
    |||||||||||||||||||||||||||| ||||    
T  20672761 aaacagtttgactttattttatcttttgttata 20672729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 29168145 - 29168177
Alignment:
Q  164 tttattttatcttttgctatagaaataacttat 196  Q
    ||||||||||||||||||||||||||| |||||    
T  29168145 tttattttatcttttgctatagaaatagcttat 29168177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 30627949 - 30628029
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||| |||||||||||| |||||| |||||    ||||| ||| | |||||||||||||||| || ||||||| |||||||    
T  30627949 gataacttatgaaaacaacttatagcttacacataaacaattttattttattttatcttttgttacagaaatagcttatac 30628029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 31884617 - 31884537
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||  ||||| ||||  || ||||| ||  | || ||||||| ||||| ||||||||||||||||||    
T  31884617 gatagcttatgaaaacaatttatagcttatatgaaaacaattcaatttgattttatattttgttatagaaataacttatac 31884537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 33912152 - 33912096
Alignment:
Q  122 gcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctttt 178  Q
    ||||||| ||||| |||||||||||  | |||||||||||| ||||||||| |||||    
T  33912152 gcttatgtaaacaacttataacttatatagaaacagtttgagtttattttaactttt 33912096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 34522141 - 34522228
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataacttatacttacgcgtttgtgctataagctgcacatataagttgtttatccaaa 244  Q
    ||||||||||||||||||||| ||  ||||||||| ||||| | || ||| || |||| |||| |||| | ||||||| ||||||||||    
T  34522141 agtttgactttattttatcttgtgtcatagaaatagcttattcataagcgcttatgctgtaagttgca-aaataagttttttatccaaa 34522228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 34563234 - 34563194
Alignment:
Q  157 gtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  34563234 gtttgactttattttatcctttgtcatagaaataacttata 34563194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 70 - 199
Target Start/End: Complemental strand, 52619074 - 52618945
Alignment:
Q  70 atgacatgttcatgtggtattttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttatt 169  Q
    |||||||||||||  | |||||||  |||||||  |||||| ||||| |||||||| ||||||||||||||||||||  || ||||| ||| ||||||||    
T  52619074 atgacatgttcataagctattttcaccttattttcacaagctcttcaagatagcttgtgaaaacagcttataacttatatgaaaacaatttaactttatt 52618975  T
Q  170 ttatcttttgctatagaaataacttatact 199  Q
    | ||| |||| | |||||||| ||||||||    
T  52618974 taatcatttgttttagaaatagcttatact 52618945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 38462305 - 38462225
Alignment:
Q  117 ggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||||||||||||||||| ||||| | ||  || |||||||||||||||||||||||||||| |||||||||| ||||||    
T  38462305 ggatagcttatgaaaacagtttatagcatatatgaaaacagtttgactttattttatcttttggtatagaaatagcttata 38462225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 24887327 - 24887409
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||||||||||| || ||||  || | |||||||||||||||||||||| ||| |||||||||| ||||||    
T  24887327 caggatagcttatgaaaacagcttttagcttatatgaatacagtttgactttattttatctattgttatagaaatagcttata 24887409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 22232860 - 22232769
Alignment:
Q  107 aagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||| || ||||||||||||||| ||||||  |||||  || ||||||||||||||||||||||| |||| |||| ||||| |||||||    
T  22232860 aagccctacatgatagcttatgaaaatagcttacgacttatatgaaaacagtttgactttattttatcatttgttatataaatagcttatac 22232769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 24235731 - 24235810
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||| |||||| ||||  |  ||| ||||||||||||| |||||||||| ||||||||||||||||||    
T  24235731 atagcttatgaaaacaacttatagcttatattcaaatagtttgactttatattatcttttgttatagaaataacttatac 24235810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 33405208 - 33405286
Alignment:
Q  112 cttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||| |||||||||||||||||||||||| ||||  || |||||  || ||||||||||| |||||||||||||||||    
T  33405208 cttcaagatagcttatgaaaacagcttatagcttatatgaaaacaaattaactttattttaccttttgctatagaaata 33405286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 198
Target Start/End: Original strand, 24158527 - 24158629
Alignment:
Q  95 acttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttatttta-tcttttgctatagaaataact 193  Q
    ||||||||| | |||| || |||||||||||||||||||||||||| |||||  |  ||||||||| |||||| |||| || |||| |||||||||||||    
T  24158527 acttatttccataagctctccaggatagcttatgaaaacagcttattactta--tataaacagtttcactttactttattcatttgttatagaaataact 24158624  T
Q  194 tatac 198  Q
    |||||    
T  24158625 tatac 24158629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 197
Target Start/End: Complemental strand, 28306203 - 28306102
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    |||||||||  |||| |||| | |||||||||||||||| ||| |||||||  || |||||||||||||||||||||  ||||| |||||| ||| ||||    
T  28306203 cttatttctgtaagctcttctgtatagcttatgaaaacaacttgtaacttatatgaaaacagtttgactttattttactttttgttatagagatagctta 28306104  T
Q  196 ta 197  Q
    ||    
T  28306103 ta 28306102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 3182413 - 3182489
Alignment:
Q  122 gcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| ||||||||| ||||||||   || ||||| ||||||||||||||||||||| |||||||| ||||||||||    
T  3182413 gcttacgaaaacagcctataacttgtatgaaaacaatttgactttattttatctttttctatagaagtaacttatac 3182489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 23785275 - 23785200
Alignment:
Q  121 agcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||| ||||||||| ||||| ||||  || | ||||||||||||||||||||||| |||| ||||||||||||||    
T  23785275 agcttgtgaaaacagtttatagcttatatgaatacagtttgactttattttatcttctgctgtagaaataacttat 23785200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 24605080 - 24605143
Alignment:
Q  135 gcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||| || |||  |||||||||||||| |||||||| ||||||||||||||||||    
T  24605080 gcttataacttacatgcaaatggtttgactttatttcatcttttgttatagaaataacttatac 24605143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 10101527 - 10101601
Alignment:
Q  122 gcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||||||||||| ||| || ||||  || ||||| ||| |||||||||||||||||| ||||||||||||||||    
T  10101527 gcttatgaaaacaacttttatcttatatgaaaacaatttaactttattttatcttttgttatagaaataacttat 10101601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 10212452 - 10212526
Alignment:
Q  122 gcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||||||||||| ||| || ||||  || ||||| ||| |||||||||||||||||| ||||||||||||||||    
T  10212452 gcttatgaaaacaacttttatcttatatgaaaacaatttaactttattttatcttttgttatagaaataacttat 10212526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 39602257 - 39602334
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||||||||||||||||||||||||||| |  | |||| ||| ||||||| ||||||||| ||||||||||| |||||    
T  39602257 gatagcttatgaaaacagcttataactta-tacgcaacaatttaactttatgttatctttttctatagaaatagcttat 39602334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 116 - 198
Target Start/End: Original strand, 40122798 - 40122879
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||| |||||| |||||| |||  | | |||||||||||||||||||||||||||| ||| |||||| |||||||    
T  40122798 aggatagcttataaaaacaacttatagctttat-gaaaacagtttgactttattttatcttttgttattgaaatagcttatac 40122879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 36646427 - 36646508
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||||||  ||||||||||  || ||||| ||  ||||||||||||||||||  ||||||||| ||||||    
T  36646427 aggatagcttatgaaaacaagttataacttatatgaaaacaattatactttattttatcttttgtcatagaaatagcttata 36646508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 49586997 - 49587042
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||    
T  49586997 aaacagtttgactttattttatcttttgttatagaaatagcttata 49587042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 20502104 - 20502176
Alignment:
Q  107 aagcccttcaggatagcttatgaaaacagcttataacttacttggaaacag-tttgactttattttatctttt 178  Q
    |||| |||||||||||||||||||||||||||||| | ||  || |||||| ||||||||||||| |||||||    
T  20502104 aagctcttcaggatagcttatgaaaacagcttatagcgtatatgaaaacagttttgactttatttgatctttt 20502176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 1217845 - 1217900
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttatttt 171  Q
    |||||||||||||||||||||||||||||||| || ||||| ||| |||| |||||    
T  1217845 aggatagcttatgaaaacagcttataacttacatgaaaacaatttaacttcatttt 1217900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 219
Target Start/End: Complemental strand, 1395688 - 1395593
Alignment:
Q  124 ttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatacttacgcgtttgtgctataagc 219  Q
    |||||||||||| | ||| ||||  || ||| | |||||||||||||||||||||| |||||||||| ||||||| || ||  || ||||||||||    
T  1395688 ttatgaaaacagttcatagcttatatgaaaataatttgactttattttatcttttgttatagaaatagcttatacatatgcacttttgctataagc 1395593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 2128332 - 2128403
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatacttacgcgtttgtgctataagctgca 223  Q
    ||||| ||| |||||||||||||||||| |||||||||| ||||||| ||  || || ||||||||||||||    
T  2128332 aaacaatttaactttattttatcttttgttatagaaatagcttatacataaacgcttatgctataagctgca 2128403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 2201151 - 2201092
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttt 177  Q
    ||||||| |||||||||||||||| ||||  || ||||||||||||||| ||||||||||    
T  2201151 gatagctaatgaaaacagcttatagcttatatgaaaacagtttgactttgttttatcttt 2201092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 31337450 - 31337509
Alignment:
Q  120 tagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttg 179  Q
    ||||||||||| ||| |||||||||||  |  ||||||||||||||||||||||||||||    
T  31337450 tagcttatgaatacaacttataacttatataaaaacagtttgactttattttatcttttg 31337509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 33307500 - 33307579
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||| |||||||||||  |  ||| |||||| | || |||||||||||||| ||||||||| ||||||    
T  33307500 atagcttatgaaaacatcttataacttatataaaaatagtttggcattgttttatcttttgctctagaaataatttatac 33307579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 34254890 - 34254937
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatact 199  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  34254890 aaacagtttgactttattttatcatttgctacagaaatagcttatact 34254937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 36783382 - 36783453
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||||||||||||| |||  |||  || ||||| ||| |||||||||||||||||| ||||||||||    
T  36783382 atagcttatgaaaacagctaatagtttatatgaaaacaattttactttattttatcttttggtatagaaata 36783453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 38902077 - 38902030
Alignment:
Q  150 ggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  38902077 ggaaacagtttcactttattttatcgtttgctatacaaataacttata 38902030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 115 - 170
Target Start/End: Complemental strand, 41452549 - 41452494
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattt 170  Q
    ||||||||||||||||||||||||| |||| |  || |||||||||||||||||||    
T  41452549 caggatagcttatgaaaacagcttacaactaatatgaaaacagtttgactttattt 41452494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 250
Target Start/End: Original strand, 42747834 - 42747954
Alignment:
Q  128 gaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatacttacgcgtttgtgctataagctgcacata 227  Q
    |||||||||||||| |||||    ||| | ||| |||||  |||||||| | ||||||||||| ||||||| || |||||||||||||||| ||  || |    
T  42747834 gaaaacagcttatagcttacacataaataatttaactttcatttatcttattctatagaaatagcttatacataggcgtttgtgctataagttg--caaa 42747931  T
Q  228 taagttgtttatccaaatagggc 250  Q
    |||| |||||||||||| |||||    
T  42747932 taagctgtttatccaaacagggc 42747954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 905058 - 905100
Alignment:
Q  159 ttgactttattttatcttttgctatagaaataacttatactta 201  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  905058 ttgactttattttatcttttgttatagaaatagcttatactta 905100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 174
Target Start/End: Original strand, 48286835 - 48286913
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatc 174  Q
    |||||||||| |||| || || |||| ||||||||||||| ||||||||||  |||||||| ||| |||||||| ||||    
T  48286835 cttatttctataagctctacatgataacttatgaaaacagtttataacttatatggaaacaatttaactttattctatc 48286913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 48364960 - 48365006
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  48364960 aaacaatttgactttattttatcttttgttatcgaaataacttatac 48365006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 54775112 - 54775074
Alignment:
Q  157 gtttgactttattttatcttttgctatagaaataactta 195  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  54775112 gtttgactttattttatcttttgttatagaaataactta 54775074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 20192664 - 20192733
Alignment:
Q  129 aaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||  |||  || |||| ||||||||||||||||||||||| |||| ||||| |||||||    
T  20192664 aaaacagcttatagattatatgaaaactgtttgactttattttatcttttgttatataaatagcttatac 20192733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 20220460 - 20220383
Alignment:
Q  121 agcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||| ||||||||||||| |||  || |||||||||| ||||| |||||||||||  |||||| ||| |||||||    
T  20220460 agcttataaaaacagcttatagcttgtttagaaacagttttactttgttttatcttttattatagatataccttatac 20220383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 70 - 171
Target Start/End: Original strand, 20467185 - 20467286
Alignment:
Q  70 atgacatgttcatgtggtattttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttatt 169  Q
    ||||||||||||| || | |||||| || ||||  |||||| |   |||||| ||||||||||||||||||| |||||||| ||| ||||||| | ||||    
T  20467185 atgacatgttcatatgctgttttcggctaattttgacaagctcgctaggatatcttatgaaaacagcttatagcttacttgtaaatagtttgaatatatt 20467284  T
Q  170 tt 171  Q
    ||    
T  20467285 tt 20467286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 33883044 - 33882971
Alignment:
Q  125 tatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||| |||||||||||| | |  ||| | ||| |||||||||||||||||| ||||||||||| ||||||    
T  33883044 tatgaaaatagcttataacttgcataaaaataatttcactttattttatcttttgttatagaaataatttatac 33882971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 48397666 - 48397589
Alignment:
Q  121 agcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||| ||||||||| |||||| ||||  |  ||||| |||||||||||||||||||||  |||| |||||||||||||    
T  48397666 agctaatgaaaacaacttatagcttaaataaaaacaatttgactttattttatcttttattataaaaataacttatac 48397589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 30956707 - 30956751
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||||    
T  30956707 aaacaatttaactttattttatcttttgctatagaaatagcttat 30956751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 30972519 - 30972563
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||||    
T  30972519 aaacaatttaactttattttatcttttgctatagaaatagcttat 30972563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 33965525 - 33965604
Alignment:
Q  107 aagcccttcaggatagcttatgaaaacagcttataactt--acttggaaacagtttgactttattttatcttttgctata 184  Q
    |||| ||||| ||||||||||||||||| |||||| |||  |  || ||||||||||||||||||||| |||||| ||||    
T  33965525 aagctcttcaagatagcttatgaaaacatcttatagcttttatatgaaaacagtttgactttattttaccttttgttata 33965604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 1816605 - 1816546
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctttt 178  Q
    |||||||||||||||| |||||| ||||     |||||||||||||||||||||||||||    
T  1816605 atagcttatgaaaacaacttatatcttatacaaaaacagtttgactttattttatctttt 1816546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 29600772 - 29600843
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaat 189  Q
    ||||| |||||||||| | ||||| |||| ||| |||||  |||| |||||||||| |||||||||||||||    
T  29600772 gataggttatgaaaacggtttatagcttatttgaaaacaaattgattttattttatgttttgctatagaaat 29600843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 198
Target Start/End: Original strand, 41028923 - 41028978
Alignment:
Q  143 cttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||| ||| |||||| ||||||||||||| ||||||| |||||||||| |||||||    
T  41028923 cttatttgaaaacagattgactttattttttcttttgttatagaaatagcttatac 41028978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 51278225 - 51278284
Alignment:
Q  139 ataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||  || ||||||||||||||||||| || ||||| |||||||||| |||||||    
T  51278225 ataacttaaatgaaaacagtttgactttatttaatattttgttatagaaatagcttatac 51278284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 52597710 - 52597631
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||| |||||||||||  || ||||| | | |||| | |||||||||| |||| |||||| |||||||    
T  52597710 atagcttatgaaaacatcttataacttatatgaaaacaatgttacttcactttatcttttactatggaaatagcttatac 52597631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 237422 - 237348
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||| |||||||||||| |||||||||||| || | | | ||| | ||||||||||||| || ||||||||||    
T  237422 aggataacttatgaaaacaacttataacttacatgaatataattttattttattttatcttctgttatagaaata 237348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 10357452 - 10357378
Alignment:
Q  122 gcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||||||||||| ||| || ||||  || ||| | ||| || ||||||||||||||| ||||||||||||||||    
T  10357452 gcttatgaaaacaacttgtatcttatatgaaaaaaatttaacattattttatcttttgttatagaaataacttat 10357378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 27792917 - 27792815
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    |||||||||| |||| || || ||||| ||||||||||| |||  | ||||  || ||| |||||||| ||||||||||||||| | | |||||| ||||    
T  27792917 cttatttctataagctctacatgatagtttatgaaaacaacttgcagcttatatgaaaatagtttgaccttattttatcttttgtttttgaaatagctta 27792818  T
Q  196 tac 198  Q
    |||    
T  27792817 tac 27792815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 200
Target Start/End: Complemental strand, 34318071 - 34318029
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataacttatactt 200  Q
    |||||||||||||||| ||||| |||||||||| |||||||||    
T  34318071 tttgactttattttatattttgttatagaaatagcttatactt 34318029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 38971248 - 38971202
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||| |||||||||||||| ||||| |||||| |||||||||||    
T  38971248 aaacagtatgactttattttattttttgatatagagataacttatac 38971202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 44061104 - 44061150
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| ||| || |||||||||||||||||||||||||| |||||||    
T  44061104 aaacaatttaaccttattttatcttttgctatagaaatagcttatac 44061150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 44284139 - 44284185
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||| |||||| ||||| |||||||||| |||||||    
T  44284139 aaacagtttgactttgttttattttttgttatagaaatagcttatac 44284185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 53736198 - 53736240
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||    
T  53736198 agtttgacattattttatcttttgttatagaaataactcatac 53736240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 8007777 - 8007822
Alignment:
Q  153 aacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||| ||||||||||| |||||||| | |||||||    
T  8007777 aacagtttgactttactttatcttttgttatagaaacagcttatac 8007822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 16790181 - 16790214
Alignment:
Q  164 tttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||| |||||||||||||||||    
T  16790181 tttattttatcttttgttatagaaataacttata 16790214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 20267140 - 20267107
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaat 189  Q
    |||||||||||||||||||||||| |||||||||    
T  20267140 agtttgactttattttatcttttgttatagaaat 20267107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 23952193 - 23952230
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataactta 195  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  23952193 tttgacttaattttatcttttgttatagaaataactta 23952230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 26474373 - 26474296
Alignment:
Q  113 ttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||| |||||||||| ||||||||||||| |||||  | ||||||||  || || |||||||||||| | ||||||||    
T  26474373 ttcaagatagcttattaaaacagcttataccttacaagaaaacagttcaaccttcttttatcttttgttgtagaaata 26474296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 32095272 - 32095317
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||| ||| |||| ||||||||||||| |||||||||||||||||    
T  32095272 aaacaatttaacttaattttatcttttgttatagaaataacttata 32095317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 37689211 - 37689178
Alignment:
Q  163 ctttattttatcttttgctatagaaataacttat 196  Q
    |||||||||||||||||||||||||||| |||||    
T  37689211 ctttattttatcttttgctatagaaatagcttat 37689178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 46778308 - 46778353
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||| ||| |||||||||||||| |||||||||||||| ||||||    
T  46778308 aaacaatttaactttattttatctcttgctatagaaatagcttata 46778353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 48323810 - 48323765
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||| ||||||||||| |||||||||  |||||||||||||||||    
T  48323810 aaacaatttgactttatattatcttttattatagaaataacttata 48323765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 584035 - 583991
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||| ||| ||||||||||||| ||| |||||||||||||||||    
T  584035 aaacaatttaactttattttatcattttctatagaaataacttat 583991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 15304428 - 15304472
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||| ||| |||||||||||||||||| |||||||||| |||||    
T  15304428 aaacaatttaactttattttatcttttgttatagaaatagcttat 15304472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 22343637 - 22343589
Alignment:
Q  112 cttcaggatagcttatgaaaacagcttataacttacttggaaacagttt 160  Q
    |||||| |||||||||| |||||||||||||||||  || |||||||||    
T  22343637 cttcagtatagcttatggaaacagcttataacttatatgaaaacagttt 22343589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 23315671 - 23315591
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctt 176  Q
    |||||||| | |||| ||| || |||||||||| ||||| |||||| | ||  || ||||| |||||||||||||||||||    
T  23315671 cttatttccataagctctttagaatagcttatggaaacatcttatagcctatatgaaaacaatttgactttattttatctt 23315591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 25183035 - 25183107
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||||||||||||||||||| || |  || ||| || || ||||||||| |||||||| |||| |||||    
T  25183035 gatagcttatgaaaacagcttatagctcatatgaaaatagcttaactttatttaatcttttgttataaaaata 25183107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 25447291 - 25447363
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||||||||||||| ||||| ||||     ||||| ||| | ||||||||||||||| |||||||||||    
T  25447291 gatagcttatgaaaacagtttatagcttatacaaaaacaatttaagtttattttatcttttactatagaaata 25447363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 26990717 - 26990685
Alignment:
Q  158 tttgactttattttatcttttgctatagaaata 190  Q
    |||||||||||||||||||||| ||||||||||    
T  26990717 tttgactttattttatcttttgttatagaaata 26990685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 36887501 - 36887465
Alignment:
Q  162 actttattttatcttttgctatagaaataacttatac 198  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  36887501 acttaattttatcttttgttatagaaataacttatac 36887465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 43948642 - 43948602
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||| |||||| ||||||||| |||||||||    
T  43948642 tttgactttattttgtcttttactatagaaagaacttatac 43948602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 44284096 - 44284144
Alignment:
Q  87 tattttcgacttatttctacaagcccttcaggatagcttatgaaaacag 135  Q
    |||||||  |||||||||| |||| || |||||||||||||||||||||    
T  44284096 tattttcagcttatttctataagctctccaggatagcttatgaaaacag 44284144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 52243589 - 52243521
Alignment:
Q  127 tgaaaacagcttataacttacttggaaac-agtttgactttattttatcttttgctatagaaataactt 194  Q
    |||||||| |||||||||||| || |||  |||||  |||||||||| ||||||||||||||| |||||    
T  52243589 tgaaaacaacttataacttacatgaaaaatagtttcgctttattttaacttttgctatagaaacaactt 52243521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 82)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 17952745 - 17952827
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||||||| ||| || ||||  || ||| |||||||||||||||||||||||| |||||||||| ||||||    
T  17952745 caggatagcttatgaaaacatcttgtagcttatatgaaaatagtttgactttattttatcttttgttatagaaatagcttata 17952827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 42817412 - 42817502
Alignment:
Q  107 aagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||| |||||| ||||||||||||||||| |||| |||||  || |||||| ||||||| ||||||||||||| |||||||||||| ||||    
T  42817412 aagctcttcagaatagcttatgaaaacagtttattacttatatgaaaacagcttgacttcattttatcttttggtatagaaataacatata 42817502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 198
Target Start/End: Complemental strand, 3673850 - 3673750
Alignment:
Q  98 tatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||||| ||||| ||||| ||||||| ||||||| | |||||||||||  || ||||| ||| |||||||||||| ||||| ||||||||||||| |||    
T  3673850 tatttctgcaagctcttcaagatagctaatgaaaaaaacttataacttatatgaaaacaatttaactttattttatattttgttatagaaataactaata 3673751  T
Q  198 c 198  Q
    |    
T  3673750 c 3673750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 10143195 - 10143115
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||| | |||||| ||||  |  |||||||||||||| ||||||||||||| ||||||||||||||||||    
T  10143195 gatagcttatgaaaaaaacttatagcttatataaaaacagtttgacttaattttatcttttgttatagaaataacttatac 10143115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 29300716 - 29300608
Alignment:
Q  70 atgacatgttcatgtggtattttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttatt 169  Q
    |||||||||||||  | ||||||| ||||||||| | ||||  || ||||||||||||||||||| |||||||||||| || ||||| ||   |||||||    
T  29300716 atgacatgttcattagctattttctacttatttccataagcatttaaggatagcttatgaaaacaacttataacttacatgaaaacaattcacctttatt 29300617  T
Q  170 ttatctttt 178  Q
    |||||||||    
T  29300616 ttatctttt 29300608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 39567921 - 39567846
Alignment:
Q  123 cttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||||| ||||  | |||||| ||| |||||||||||||||||| |||||||||| |||||||    
T  39567921 cttatgaaaacagcttatagcttatcttgaaacaatttaactttattttatcttttgttatagaaatatcttatac 39567846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 34054946 - 34055020
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||||||||||||| |||||| | ||  || |||||||||| ||||||||||||||||| ||||||||||    
T  34054946 aggatagcttatgaaaacaccttatatcatatatgtaaacagtttgcctttattttatcttttgttatagaaata 34055020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 43141900 - 43141834
Alignment:
Q  112 cttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctttt 178  Q
    ||||||||||||||||||||||| |||||| ||||  |||||||| |||||||||| ||||||||||    
T  43141900 cttcaggatagcttatgaaaacatcttatagcttatatggaaacaatttgactttactttatctttt 43141834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 1939350 - 1939458
Alignment:
Q  89 ttttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttact-tggaaacagtttgactttattttatcttttgctatagaa 187  Q
    ||||| ||||||||| | |||| || ||| ||||||||||||||||| ||||| || | | || ||| ||||| |||||||||||||||||| |||||||    
T  1939350 ttttcaacttatttccataagctctccagtatagcttatgaaaacag-ttatagctcaatatgaaaatagtttcactttattttatcttttgttatagaa 1939448  T
Q  188 ataacttata 197  Q
    ||||||||||    
T  1939449 ataacttata 1939458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 13866917 - 13866840
Alignment:
Q  113 ttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||||||| ||||||| ||||||||  |||  |  |||||||||||||| ||||||||||||||||||||||||    
T  13866917 ttcaggatagctaatgaaaagagcttatagattatataaaaacagtttgacttaattttatcttttgctatagaaata 13866840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 201
Target Start/End: Complemental strand, 29936028 - 29935943
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatactta 201  Q
    ||||||||||||||||| | |||||| ||||| |||||||| |||||| ||||||||| | ||| ||||||||||  |||||||||    
T  29936028 aggatagcttatgaaaaaaacttatagcttacatggaaacaatttgacgttattttatttgttgttatagaaatagtttatactta 29935943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 33942169 - 33942112
Alignment:
Q  122 gcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttg 179  Q
    ||||||||||||| |||||| ||||| || ||||||||||||||||||||||||||||    
T  33942169 gcttatgaaaacaacttatagcttacatgaaaacagtttgactttattttatcttttg 33942112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 195
Target Start/End: Complemental strand, 6988160 - 6988061
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    |||||||||| || | ||||| ||||||||||||||||| |||||||||     | ||| | |||||||||||||||||||||| |||||||| ||||||    
T  6988160 cttatttctataaactcttcaagatagcttatgaaaacaacttataactagtaagaaaataatttgactttattttatcttttgttatagaaaaaactta 6988061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 15377792 - 15377709
Alignment:
Q  114 tcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||| ||||||||||||||||||||||||||||  || ||||| | | ||||||||||||| |||| ||||||| || ||||||    
T  15377792 tcagaatagcttatgaaaacagcttataacttatatgaaaacaatctaactttattttatcctttggtatagaagtagcttata 15377709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 187
Target Start/End: Complemental strand, 33256769 - 33256694
Alignment:
Q  112 cttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaa 187  Q
    ||||||||| |||||||||||| |||||||  |||  || |||||||||||||||||||||||| ||| |||||||    
T  33256769 cttcaggatggcttatgaaaactgcttatagtttatatgaaaacagtttgactttattttatctattgttatagaa 33256694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 14666571 - 14666493
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    |||||||| |||||||| |||||||||||  || || ||||||||||||||||||||||||| |||  ||| |||||||    
T  14666571 gatagcttgtgaaaacaacttataacttatatgaaatcagtttgactttattttatcttttgttatcaaaacaacttat 14666493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 28803550 - 28803632
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||| ||| ||||||| ||| || ||||  || || ||||||||||||||||||||||||| ||| |||||||||||||    
T  28803550 caggatagtttaagaaaacaacttgtagcttatatgaaatcagtttgactttattttatcttttgttatcgaaataacttata 28803632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 190
Target Start/End: Original strand, 9878700 - 9878801
Alignment:
Q  89 ttttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaa 188  Q
    |||||||||||||||| ||||| || | |||||||  ||||||||| |||||| | ||  |  ||| ||||||| |||||||||||||||| ||||||||    
T  9878700 ttttcgacttatttcttcaagctctccgggatagcgaatgaaaacaacttatagcatatgtaaaaatagtttgagtttattttatcttttgttatagaaa 9878799  T
Q  189 ta 190  Q
    ||    
T  9878800 ta 9878801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 11513921 - 11513860
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttg 179  Q
    ||||||||||||||||| |||||| ||||  || ||||| ||||||||||||||||||||||    
T  11513921 gatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatcttttg 11513860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 28933876 - 28933767
Alignment:
Q  89 ttttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaa 188  Q
    ||||| |||||||||||  ||| ||  |||||||||||||||||||  ||||||||||  || ||| | ||||| || ||||||||||||| |||| |||    
T  28933876 ttttcaacttatttctatcagctctctaggatagcttatgaaaacaatttataacttaaatgaaaataatttgatttgattttatcttttgttatataaa 28933777  T
Q  189 taacttatac 198  Q
    || |||||||    
T  28933776 tagcttatac 28933767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 37053622 - 37053545
Alignment:
Q  113 ttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||| ||||||| ||||||| | |||||||||||  || |||||||||||||||||||||| || || ||||||||||    
T  37053622 ttcatgatagctaatgaaaaaaacttataacttatatgaaaacagtttgactttattttattttctgttatagaaata 37053545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 190
Target Start/End: Original strand, 1742031 - 1742151
Alignment:
Q  70 atgacatgttcatgtggtattttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttatt 169  Q
    ||||||||| |||  | ||| ||| ||||||||| | || | ||||| ||||| |||||||||||||||||| ||||  |  ||| |||||||||| |||    
T  1742031 atgacatgtgcataagctatcttcaacttatttccataaactcttcatgatagattatgaaaacagcttatatcttatatataaagagtttgacttcatt 1742130  T
Q  170 ttatcttttgctatagaaata 190  Q
    |||| ||||| ||||||||||    
T  1742131 ttatattttgttatagaaata 1742151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 5133795 - 5133715
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||| ||| ||||||||||||||| ||||  |  |||||||||  ||||||||||||||||| |||||||||| |||||||    
T  5133795 gataacttttgaaaacagcttatatcttatataaaaacagtttatctttattttatcttttgttatagaaatagcttatac 5133715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 18962085 - 18962157
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||||||||| || ||||| ||||  || ||||||||| |||||||||||||||||| |||| |||||    
T  18962085 gatagcttatgaaaatagtttatagcttatatgaaaacagtttaactttattttatcttttgttataaaaata 18962157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 2416331 - 2416256
Alignment:
Q  123 cttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| ||||||||||||| ||||  |  ||||| ||| |||| |||||||||||||||| |||||||||||||||    
T  2416331 cttataaaaacagcttatagcttatatcaaaacaatttaacttcattttatcttttgctacagaaataacttatac 2416256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 5043607 - 5043666
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttt 177  Q
    ||||||||||||||||| ||| || ||||  || ||||||||||||||||||||||||||    
T  5043607 gatagcttatgaaaacaacttctagcttatatgaaaacagtttgactttattttatcttt 5043666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 10563594 - 10563685
Alignment:
Q  107 aagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||| |||||| |||||||||||||||| ||||||||||||    ||||| ||| ||| |||  ||||||||| |||||||||| |||||||    
T  10563594 aagctcttcagcatagcttatgaaaacaacttataacttacaaaaaaacaatttcactatatactatcttttgttatagaaatagcttatac 10563685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 240
Target Start/End: Complemental strand, 18066151 - 18066031
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatacttacgcgtttgtgctataa 217  Q
    |||||||||||||||||||||||| ||||  || ||||| ||| ||||||||| || |||| || |||||||| ||| ||| |  ||| || ||||||||    
T  18066151 gatagcttatgaaaacagcttatagcttatatgaaaacaatttaactttatttcatattttactgtagaaatagcttctacatgagcgcttatgctataa 18066052  T
Q  218 gctgcacatataagttgtttatc 240  Q
    |||  ||| ||||| ||||||||    
T  18066051 gct--acagataagatgtttatc 18066031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 199
Target Start/End: Complemental strand, 1869910 - 1869830
Alignment:
Q  117 ggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatact 199  Q
    ||||||||| ||||||||||||||||| ||  || ||||||||||| ||||  |||||||||| |||||||||| ||||||||    
T  1869910 ggatagcttgtgaaaacagcttataac-tagatgaaaacagtttgatttta-attatcttttgttatagaaatatcttatact 1869830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 3611215 - 3611169
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  3611215 aaacaatttaactttattttaccttttgctatagaaataacttatac 3611169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 196
Target Start/End: Complemental strand, 3932329 - 3932295
Alignment:
Q  162 actttattttatcttttgctatagaaataacttat 196  Q
    |||||||||||||||||||||||||||||||||||    
T  3932329 actttattttatcttttgctatagaaataacttat 3932295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 13630362 - 13630408
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||| |||||||||| || |||||||||||||||    
T  13630362 aaacagtttgactttatcttatcttttgatagagaaataacttatac 13630408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 29633098 - 29633016
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttact-tggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||||||||||||||| ||||||||  | | | || ||||| |||||||||||| ||| ||||| |||||||||||||||||    
T  29633098 aggatagcttatgaaaagagcttatagttaattatgaaaacaatttgactttattctattttttgttatagaaataacttata 29633016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 32694237 - 32694155
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||| ||||| ||||||| |||  |  ||| ||| ||| |||||||||||||||| |||||||||| |||||||    
T  32694237 aggatagcttatgcaaacaacttataaattatataaaaatagtctgattttattttatcttttgatatagaaatagcttatac 32694155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 33576675 - 33576721
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||| ||||||||| |||||||||||| |||||    
T  33576675 aaacagtttgactttattgtatcttttgttatagaaataacctatac 33576721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 40145482 - 40145424
Alignment:
Q  121 agcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttg 179  Q
    |||||||||||||| |||||||||||| |  |||||  |||||||||||||||||||||    
T  40145482 agcttatgaaaacaacttataacttacataaaaacaacttgactttattttatcttttg 40145424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 107 - 188
Target Start/End: Complemental strand, 15281521 - 15281440
Alignment:
Q  107 aagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaa 188  Q
    |||| |||||| ||||||||| |||  | |||||||| ||| || |||||||| || |||||||||||||||| ||||||||    
T  15281521 aagctcttcagaatagcttataaaagaaacttataacctacatgcaaacagttggaatttattttatcttttgatatagaaa 15281440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 32098389 - 32098434
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||| |||||||||||||||||||||| |||||||||| ||||||    
T  32098389 aaacactttgactttattttatcttttgttatagaaatagcttata 32098434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 33192197 - 33192144
Alignment:
Q  137 ttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||||  || ||||||||||||||||||||||||| || ||||||||||    
T  33192197 ttataacttatatgaaaacagtttgactttattttatcttatgttatagaaata 33192144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 188
Target Start/End: Original strand, 35099644 - 35099717
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacag-tttgactttattttatcttttgctatagaaa 188  Q
    |||||||||||||||| |||||||||||||   || ||| || ||||| |||||||||||||||| ||||||||    
T  35099644 aggatagcttatgaaagcagcttataactttaatgaaaatagttttgattttattttatcttttgttatagaaa 35099717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 35485946 - 35485881
Alignment:
Q  112 cttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttt 177  Q
    |||||||||||||||| |||||| |||||| ||||    |||| ||||||||||||||||||||||    
T  35485946 cttcaggatagcttataaaaacaacttatagcttataatgaaatagtttgactttattttatcttt 35485881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 22681230 - 22681310
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||||| |||||||||||||||||| ||||  || ||||| |||| |||| |||||||||||| | || |||||| ||||    
T  22681230 aggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatcttttgttttaaaaataatttat 22681310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 26143732 - 26143768
Alignment:
Q  162 actttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||||||||||||||| |||||||    
T  26143732 actttattttatcttttgctatagaaatagcttatac 26143768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 36863672 - 36863748
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactt 194  Q
    |||||||||||||||||  ||||||||||  |  |||  |||||||||||||||||||||| ||| ||||| |||||    
T  36863672 gatagcttatgaaaacaatttataacttatataaaaattgtttgactttattttatcttttactagagaaacaactt 36863748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 3458642 - 3458603
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataactta 195  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  3458642 agtttgactttattttatcttttgttataaaaataactta 3458603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 244
Target Start/End: Complemental strand, 4090373 - 4090247
Alignment:
Q  117 ggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatacttacgcgtttgtgctata 216  Q
    |||||||||||| ||||| ||||||  |||    |||||| ||||||||||||||||||| || ||| |||||| ||||| | ||| |  || |||| ||    
T  4090373 ggatagcttatgtaaacaacttatagattataccgaaacaatttgactttattttatcttgtgttatggaaatagcttattcatacacccttatgcttta 4090274  T
Q  217 agctgcacatataagttgtttatccaaa 244  Q
    |||| || | ||||||||||||||||||    
T  4090273 agcttca-aaataagttgtttatccaaa 4090247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 7103529 - 7103588
Alignment:
Q  118 gatagcttatgaaaa-cagcttataacttacttggaaacagtttgactttattttatctt 176  Q
    ||||||||||||||| ||||||||| ||||  |  |||||||||||||||||||||||||    
T  7103529 gatagcttatgaaaaacagcttatagcttatattaaaacagtttgactttattttatctt 7103588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 31461421 - 31461382
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  31461421 tttgactttattttatcttttgttatagaaatagcttata 31461382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 35539740 - 35539663
Alignment:
Q  124 ttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttt---tgctatagaaataacttatac 198  Q
    ||||||||| |||||||||||||  || ||| ||||||| ||||||||||||||   |||||| ||||||| ||||||    
T  35539740 ttatgaaaatagcttataacttatatgaaaatagtttgattttattttatcttttcctgctatcgaaataatttatac 35539663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 35755554 - 35755629
Alignment:
Q  123 cttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||| |||||| ||||| || ||||| |||||||||||||| | |||   |||||||||| |||||||    
T  35755554 cttatgaaaacaacttatagcttacatgaaaacaatttgactttattttctatttgattatagaaatagcttatac 35755629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 41293393 - 41293436
Alignment:
Q  207 ttgtgctataagctgcacatataagttgtttatccaaatagggc 250  Q
    ||||||||||||||||| | |||||||||||||||||| |||||    
T  41293393 ttgtgctataagctgcaaaaataagttgtttatccaaacagggc 41293436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 43199440 - 43199357
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||| ||||||||||| |||||| ||||   | | | | ||| |||||||||||||||||| | ||||||||||||||||    
T  43199440 caggatagtttatgaaaacaacttatagcttatacgaagataatttaactttattttatcttttgttgtagaaataacttatac 43199357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 195
Target Start/End: Original strand, 44438920 - 44438963
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    |||||||||||||||||||||||||||||||  |||||| ||||    
T  44438920 aaacagtttgactttattttatcttttgctacggaaatagctta 44438963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 3102678 - 3102636
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||| |||||||||| ||||| |||||||    
T  3102678 agtttgactttattttatattttgctataaaaatagcttatac 3102636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 5045238 - 5045284
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||| ||||||||||||||||||||| |||| ||||| |||||||    
T  5045238 aaacagcttgactttattttatcttttgttataaaaatagcttatac 5045284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 12215832 - 12215758
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||| |||||| ||||||||||||| | ||  ||||||| | | ||||||||||||||||||| | ||||||||    
T  12215832 aggatggcttataaaaacagcttatagcatatatggaaacgggtcgactttattttatcttttgttgtagaaata 12215758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 29430772 - 29430699
Alignment:
Q  124 ttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||| ||||||||||| ||||   | |||||||||||||||| |||| |||||| |||||||||| |||||||    
T  29430772 ttatgagaacagcttatagcttataagaaaacagtttgacttta-tttaacttttgttatagaaatagcttatac 29430699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 32615364 - 32615418
Alignment:
Q  143 cttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||| ||| ||||||||||| |||| ||||||||||| ||||||||| |||||||    
T  32615364 cttaattgaaaacagtttgattttagtttatcttttgttatagaaatcacttata 32615418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 35459899 - 35459853
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| |||||||||||||||||||||| |||| ||||| |||||||    
T  35459899 aaacaatttgactttattttatcttttggtatacaaatagcttatac 35459853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 37276772 - 37276722
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactt 165  Q
    ||||||| |||||||||||| |||||||||||  || ||||||||||||||    
T  37276772 caggataacttatgaaaacaacttataacttatatgaaaacagtttgactt 37276722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 40837509 - 40837555
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| |||||||||| ||||||||||| |||||||||| |||||||    
T  40837509 aaacaatttgactttaatttatcttttgttatagaaatagcttatac 40837555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 42592358 - 42592292
Alignment:
Q  122 gcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaa 188  Q
    |||||||||||||||||||| ||||  || |||||  || |||| ||||||||||||| ||||||||    
T  42592358 gcttatgaaaacagcttatagcttatatgaaaacaagttaacttaattttatcttttggtatagaaa 42592292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 43530190 - 43530236
Alignment:
Q  150 ggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    |||| |||||||||||||||||||||| | ||||||||||| |||||    
T  43530190 ggaagcagtttgactttattttatcttgtcctatagaaatagcttat 43530236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 15173506 - 15173469
Alignment:
Q  161 gactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  15173506 gactttatttcatcttttgttatagaaataacttatac 15173469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 29503131 - 29503188
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctt 176  Q
    |||| ||||| ||||| ||||||||||  ||| ||| |||||||||||||||||||||    
T  29503131 atagtttatggaaacatcttataacttctttgaaaatagtttgactttattttatctt 29503188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 40759012 - 40758967
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||| |||||||||||||||||||||| ||| |||||| ||||||    
T  40759012 aaacaatttgactttattttatcttttgttatggaaatagcttata 40758967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 44439441 - 44439486
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||||||| |||||||||||| ||||| ||| |||||||||||||    
T  44439441 aaacagtttaactttattttatattttgttatggaaataacttata 44439486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 3423855 - 3423895
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||||| || | |||||||||||||    
T  3423855 tttgactttattttatcttttggtacaaaaataacttatac 3423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 6547893 - 6547853
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||| ||||  |||||||||||||||||||||||||    
T  6547893 tttgactttgttttgacttttgctatagaaataacttatac 6547853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 9395145 - 9395073
Alignment:
Q  126 atgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||  |||  || ||||| |||  |||||||||||||||| ||||||||| | |||||||    
T  9395145 atgaaaacagcttatagattatatgaaaacaatttagctttattttatctttttctatagaaaaatcttatac 9395073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 9875548 - 9875584
Alignment:
Q  162 actttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||  ||||||||||||||||||||||||||    
T  9875548 actttatttattcttttgctatagaaataacttatac 9875584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 11344365 - 11344409
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||| ||||||||| |||||||||||| |||||||||| |||||    
T  11344365 aaacaatttgactttcttttatcttttgttatagaaatatcttat 11344409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 11863705 - 11863777
Alignment:
Q  126 atgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||| |||  || ||||| ||| ||| |||||||||||||||| || || ||||| ||||    
T  11863705 atgaaaacagcttataaattatatgaaaacaatttaactctattttatcttttgctgtaaaactaactcatac 11863777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 205 - 248
Target Start/End: Original strand, 27695747 - 27695788
Alignment:
Q  205 gtttgtgctataagctgcacatataagttgtttatccaaatagg 248  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||    
T  27695747 gtttgtgctataagct--acaaataagttgtttatccaaatagg 27695788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 28810431 - 28810503
Alignment:
Q  129 aaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatactta 201  Q
    ||||||| ||||| ||||  ||||||||||| || |||||||||| ||||  ||||| |||| ||||||||||    
T  28810431 aaaacagattatagcttatatggaaacagttcgaatttattttatattttattataggaatagcttatactta 28810503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 32821853 - 32821809
Alignment:
Q  97 ttatttctacaagcccttcaggatagcttatgaaaacagcttata 141  Q
    ||||||||| |||| ||| |||||||||||||||||||| |||||    
T  32821853 ttatttctataagctctttaggatagcttatgaaaacagtttata 32821809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 34339112 - 34339076
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaa 188  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  34339112 aaacagtctgactttattttatctttagctatagaaa 34339076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 37292391 - 37292455
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttg 179  Q
    |||||||||||| ||||||| || ||| ||||  || ||| ||||| ||||||||||||||||||    
T  37292391 caggatagcttaagaaaacaactaatagcttatatgaaaatagttttactttattttatcttttg 37292455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 38239638 - 38239678
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||| ||||||||||||| |||||||||| |||||||    
T  38239638 tttgacttgattttatcttttgttatagaaatagcttatac 38239678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 41851245 - 41851281
Alignment:
Q  151 gaaacagtttgactttattttatcttttgctatagaa 187  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  41851245 gaaacaatttgactttattttatctttttctatagaa 41851281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 43205361 - 43205281
Alignment:
Q  89 ttttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttatt 169  Q
    ||||| ||||||||| | |||| || |  |||||||||||||||||| ||||| ||||  || |||||||||| |||||||    
T  43205361 ttttcaacttatttccataagctctccgtgatagcttatgaaaacagattatatcttatatgaaaacagtttggctttatt 43205281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 44119763 - 44119727
Alignment:
Q  162 actttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  44119763 actttattttatcttttactataaaaataacttatac 44119727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 8e-16; HSPs: 80)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 115 - 198
Target Start/End: Original strand, 5006553 - 5006636
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||| |||||||||||||||  ||||| ||||  || |||||||||||||||||||||||||||| ||||| |||| |||||||    
T  5006553 cagggtagcttatgaaaacaatttataccttatatgaaaacagtttgactttattttatcttttgttataggaatagcttatac 5006636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 27548286 - 27548207
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||||||||||| ||||  || ||||| || ||||||||||||||||||||||  |||||| ||||||    
T  27548286 gatagcttatgaaaacagcttatagcttaaatgaaaacaattagactttattttatcttttgctaaggaaatagcttata 27548207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 40689030 - 40689105
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||||||||||| |||||||||| ||||  || ||| | ||| |||||||||||||||||||||||||||||    
T  40689030 caggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttatcttttgctatagaaata 40689105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 2894830 - 2894760
Alignment:
Q  128 gaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| ||||||||||||||||| ||||||||  |||||| ||||||||||| |||||||||| |||||||    
T  2894830 gaaaatagcttataacttacttgaaaacagttcaactttaatttatcttttgttatagaaatagcttatac 2894760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 3968247 - 3968322
Alignment:
Q  120 tagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||| |||||||||||| | |   |||| ||| | |||||||||||||||||||||||||||||||||||    
T  3968247 tagcttatgaaaatagcttataacttgcat---aacaatttaaatttattttatcttttgctatagaaataacttatac 3968322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 27481341 - 27481421
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||| | |||||| ||||  |||||||||||||||||  ||||||| |||| |||||||||| |||||||    
T  27481341 gatagcttatgaaaataacttatagcttatatggaaacagtttgacttcgttttatcctttgttatagaaatagcttatac 27481421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 32156969 - 32156887
Alignment:
Q  167 attttatcttttgctatagaaataacttatact--tacgcgtttgtgctataagctgcacatataagttgtttatccaaatagg 248  Q
    ||||||| |||||| ||||||||| ||||||||  || |||||| |||||||||||||| || |||||||||||||||||||||    
T  32156969 attttatgttttgcgatagaaatagcttatactgataagcgtttatgctataagctgcaaat-taagttgtttatccaaatagg 32156887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 28340444 - 28340523
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||| |||||||| |||||||||||| || ||||||||||||||||||||||  |||| |  ||||||| |||||||    
T  28340444 atagcttctgaaaacaacttataacttacatgaaaacagtttgactttattttattgtttgttgaagaaatagcttatac 28340523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 29363562 - 29363483
Alignment:
Q  97 ttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctt 176  Q
    ||||||| | |||| || ||||||| ||||||| |||||||||||||| |  || |||||||||||||||||||||||||    
T  29363562 ttatttccataagctctccaggataacttatgataacagcttataactaatatgaaaacagtttgactttattttatctt 29363483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 196
Target Start/End: Original strand, 1350278 - 1350367
Alignment:
Q  107 aagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    |||| ||||||||||| ||||||||||||||||||  |||  || ||| ||||||||||| |||| ||  ||| ||||||||||||||||    
T  1350278 aagctcttcaggatagtttatgaaaacagcttatagattatgtgaaaaaagtttgactttcttttgtcaattgttatagaaataacttat 1350367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 28165143 - 28165034
Alignment:
Q  89 ttttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaa 188  Q
    ||||| ||||||||| | |||| || || |||||||||| || |||| ||||| ||||  |  ||||| |||||||| ||||||||||||| ||||||||    
T  28165143 ttttcaacttatttccataagctctccatgatagcttataaagacagtttatagcttatattaaaacaatttgacttcattttatcttttgttatagaaa 28165044  T
Q  189 taacttatac 198  Q
     |||||||||    
T  28165043 gaacttatac 28165034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 39591548 - 39591593
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||    
T  39591548 aaacaatttgactttattttatcttttgttatagaaataacttata 39591593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 190
Target Start/End: Complemental strand, 44910656 - 44910555
Alignment:
Q  89 ttttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaa 188  Q
    |||||| |||||||| |||||| || || ||||| ||||||||||| ||| || |||   || ||| |||||||||||||||| ||||||| ||||||||    
T  44910656 ttttcggcttatttccacaagctctccatgatagtttatgaaaacaacttttagcttgtgtgaaaaaagtttgactttattttctcttttgatatagaaa 44910557  T
Q  189 ta 190  Q
    ||    
T  44910556 ta 44910555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 197
Target Start/End: Complemental strand, 4966200 - 4966100
Alignment:
Q  97 ttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||||| | |||| ||||||||| |||||||||||||||||||| || |  || |||| ||||||  |||||||||| |||| | | ||||||||||||    
T  4966200 ttatttccataagctcttcaggatggcttatgaaaacagcttatacctaatatgaaaactgtttgatattattttatcctttgttgtggaaataacttat 4966101  T
Q  197 a 197  Q
    |    
T  4966100 a 4966100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 23918991 - 23918903
Alignment:
Q  107 aagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    ||||||||||| |||| ||||||  |||| ||||| ||||  || ||||| ||||||||||||||||||||||  ||||| ||||||||    
T  23918991 aagcccttcagaatagtttatgattacagattatagcttatatgaaaacaatttgactttattttatcttttgtaatagagataactta 23918903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 30456497 - 30456569
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||| ||||||||||  |||||||||||  || ||||| |||||||||||||||||||||| | ||||||||    
T  30456497 gatagtttatgaaaaccacttataacttatatgaaaacaatttgactttattttatcttttgttttagaaata 30456569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 35536114 - 35536050
Alignment:
Q  134 agcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||  || ||||| ||||||||||||||||||| || |||||||||| |||||||    
T  35536114 agcttataacttatatgaaaacaatttgactttattttatcttatgttatagaaatagcttatac 35536050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 34083577 - 34083644
Alignment:
Q  123 cttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||||||||||||| ||||     ||||| ||| |||||||||||||||||||||||||||||    
T  34083577 cttatgaaaacagcttatagcttatacacaaacaatttaactttattttatcttttgctatagaaata 34083644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 44151505 - 44151588
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttg 179  Q
    |||||||| | ||||  |||| ||||| ||||||||||| |||||| ||||  |||||||||||| |||||||| |||||||||    
T  44151505 cttatttccataagcttttcaagatagtttatgaaaacaacttatagcttatatggaaacagttttactttattctatcttttg 44151588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 1417285 - 1417215
Alignment:
Q  120 tagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||||||||| |||||  ||||  || ||||| |||||||||||||||||||||| |||| |||||    
T  1417285 tagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttatcttttgttatataaata 1417215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 7244691 - 7244645
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||| |||||||||||| |||||||||| |||||||    
T  7244691 aaacagtttgactttcttttatcttttgatatagaaatagcttatac 7244645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 12110389 - 12110311
Alignment:
Q  112 cttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||| |||||||||||||||||||||||| ||||     ||||| ||||||||||||||||||| ||  |||||||||    
T  12110389 cttcaagatagcttatgaaaacagcttatagcttataccaaaacaatttgactttattttatcttgtgtaatagaaata 12110311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 20476557 - 20476635
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||||||||  |||||||||||| ||||  || ||  | ||||| ||||||||||||||||| |||||||||||||||    
T  20476557 gatagcttatcgaaacagcttatatcttagatgaaagaaatttgaatttattttatcttttgcaatagaaataacttat 20476635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 30160971 - 30161009
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  30160971 aaacagtttgactttattttatcttttgccatagaaata 30161009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 31338533 - 31338471
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctttt 178  Q
    ||||||| ||||| ||||| |||||||||||  |  |||||||||||||||||||||||||||    
T  31338533 aggatagtttatggaaacaacttataacttatataaaaacagtttgactttattttatctttt 31338471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 9527140 - 9527205
Alignment:
Q  121 agcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctataga 186  Q
    |||||||||||||| ||||||  |||  || |||||||||||||||||| ||||||||| ||||||    
T  9527140 agcttatgaaaacaacttatagtttatatgaaaacagtttgactttattatatcttttgttataga 9527205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 17989059 - 17989136
Alignment:
Q  107 aagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctata 184  Q
    |||| |||||||| ||||||||||||||  |||||  |||  || |||||||||||||||||||||| ||||| ||||    
T  17989059 aagctcttcaggagagcttatgaaaacaaattatagtttatatgaaaacagtttgactttattttatattttgttata 17989136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 1418454 - 1418374
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| |||||||| || |||| ||||||  || |||||  ||||||||||| ||||||||| ||||||||||| ||||||    
T  1418454 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatac 1418374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 2048088 - 2048167
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||| ||| |||||||| ||||  || || ||||||||||||| ||||||||||| || ||||||| |||||||    
T  2048088 gatagcttatgtaaaaagcttatagcttatctgaaatcagtttgactttaatttatcttttg-taaagaaatagcttatac 2048167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 5369737 - 5369789
Alignment:
Q  117 ggatagcttatgaaaacagcttataacttacttggaaacagtttgactttatt 169  Q
    ||||||||||||||||||||||||| | ||  || ||||||||||||||||||    
T  5369737 ggatagcttatgaaaacagcttatagcatatatgaaaacagtttgactttatt 5369789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 7453485 - 7453525
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||||||||||||||||| | |||||||    
T  7453485 tttgactttattttatcttttgctatagaaaaatcttatac 7453525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 27492818 - 27492746
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||||||||||| ||||| |||||  || ||| ||||||| ||||||| | |||||| ||||||||||    
T  27492818 gatagcttatgaaaacatcttattacttatatgaaaaaagtttgattttatttgaacttttgttatagaaata 27492746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 38010739 - 38010659
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    ||||||| |||||||||||||||||| ||||  || ||||| |||| |||| |||||||||||| | || |||||| ||||    
T  38010739 aggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatcttttgttttaaaaataatttat 38010659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 46531522 - 46531490
Alignment:
Q  152 aaacagtttgactttattttatcttttgctata 184  Q
    |||||||||||||||||||||||||||||||||    
T  46531522 aaacagtttgactttattttatcttttgctata 46531490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 47177659 - 47177579
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||| ||||||||||||||| ||||  || ||||| ||| ||||| |||| | ||||| |||||||||| |||||||    
T  47177659 gatagcttttgaaaacagcttatagcttatatgaaaacaatttaactttgttttgtattttgatatagaaataccttatac 47177579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 992092 - 992013
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||| || ||||| ||||  || ||| | |||| ||||||||||| ||||| |||||||| |||||||||    
T  992092 atagcttatgaaaaaagtttataccttatatgaaaatattttgtctttattttattttttgttatagaaacaacttatac 992013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 194
Target Start/End: Original strand, 1373576 - 1373663
Alignment:
Q  107 aagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactt 194  Q
    |||||||||| ||||| |||||||||||| |||||   ||  || ||| |||||||||||| |||||||||||  ||| |||||||||    
T  1373576 aagcccttcaagatagtttatgaaaacaggttatagactatatgaaaaaagtttgactttaatttatcttttgtcataaaaataactt 1373663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 3802187 - 3802266
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||| | |||||||||||||| |||  || ||||  ||||||||||||||| |||||  |||||||||| |||||||    
T  3802187 atagcttttaaaaacagcttataatttatatgaaaacgatttgactttattttaccttttattatagaaatagcttatac 3802266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 7274503 - 7274424
Alignment:
Q  98 tatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttt 177  Q
    ||||||||||| | || ||| |||||||||||||| |||| ||| | ||| || |||||||||  |||||||||||||||    
T  7274503 tatttctacaaacactgcagtatagcttatgaaaatagctgatagcatacatgaaaacagtttacctttattttatcttt 7274424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 237
Target Start/End: Complemental strand, 30535586 - 30535468
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatacttacgcgtttgtgctataa 217  Q
    ||||||||||| ||||||||||||  |||   | ||||| ||  | || ||||||||||||| ||||||| |||||||||| || | | || ||||||||    
T  30535586 gatagcttatggaaacagcttatagattatacgaaaacacttcaatttaattttatcttttgttatagaagtaacttatacgtaagtgcttatgctataa 30535487  T
Q  218 gctgcacatataagttgttt 237  Q
    |||||| || ||||||||||    
T  30535486 gctgcaaat-taagttgttt 30535468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 198
Target Start/End: Complemental strand, 31341180 - 31341137
Alignment:
Q  155 cagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||    
T  31341180 cagtttgactttattttatcttttgttatacaaatagcttatac 31341137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 39505947 - 39505900
Alignment:
Q  151 gaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||| ||||| ||||||||||| | |||||||||||||    
T  39505947 gaaacagtttgactctatttaatcttttgctacaaaaataacttatac 39505900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 42656498 - 42656459
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  42656498 tttgactttattttatcttttgttatagaaatagcttata 42656459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 45593767 - 45593846
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||  ||| ||||||  |||||||  || |||||||||||||||||||||| ||||| || ||||||| |||||||    
T  45593767 atagcttcagaacacagctcctaacttatatgaaaacagtttgactttattttatgttttgttacagaaatagcttatac 45593846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 514821 - 514767
Alignment:
Q  87 tattttcgacttatttctacaagcccttcaggatagcttatgaaaacagcttata 141  Q
    |||||||  |||||||  |||||| || |||||||||||||||||||||||||||    
T  514821 tattttcagcttattttgacaagctctccaggatagcttatgaaaacagcttata 514767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 198
Target Start/End: Original strand, 1432060 - 1432094
Alignment:
Q  164 tttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||| ||||||||||||||||||    
T  1432060 tttattttatcttttgttatagaaataacttatac 1432094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 2999180 - 2999142
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  2999180 aaacggtttgactttattttatcttttgttatagaaata 2999142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 198
Target Start/End: Original strand, 3610765 - 3610867
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    |||||||||| |||| ||  ||||||| ||| ||||||| |||||| ||||     |||||||||| ||| ||||||||||||| | |||||||| ||||    
T  3610765 cttatttctataagctctctaggatagtttacgaaaacaacttatagcttataccaaaacagtttgccttcattttatcttttgttgtagaaatagctta 3610864  T
Q  196 tac 198  Q
    |||    
T  3610865 tac 3610867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 5628613 - 5628691
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    |||| ||||||||||||||||||| ||||  || ||||||||  ||| ||||||||| |||| |||| ||||| |||||    
T  5628613 gatatcttatgaaaacagcttatatcttaaatgaaaacagttcaactctattttatcatttgttataaaaatagcttat 5628691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 7623167 - 7623081
Alignment:
Q  112 cttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| ||||| ||||||||| |||||| | ||||  |  ||| |||| |||||||||||| |||||| |||| |||||||||||||    
T  7623167 cttcaagatagtttatgaaaatagcttacagcttatataaaaagagttggactttattttaccttttgttataaaaataacttatac 7623081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 9872860 - 9872814
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||||| ||||| |||||||| ||| |||||    
T  9872860 aaacagtttgactttattttatattttgttatagaaacaacatatac 9872814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 19123238 - 19123200
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  19123238 aaacagtttgaatttattttatcttttgatatagaaata 19123200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 21453319 - 21453245
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||||||||||||||| ||||| ||||  ||  ||||  |||||||||| |||||||||| || |||||||    
T  21453319 aggatagcttatgaaaacagtttatagcttatatgagaacaacttgactttatcttatcttttgttacagaaata 21453245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 195
Target Start/End: Complemental strand, 22759210 - 22759132
Alignment:
Q  117 ggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    ||||||||||||||| |||||| || ||||  || ||||| |||  ||||||||||||||||| |||| ||||| ||||    
T  22759210 ggatagcttatgaaatcagcttttagcttatatgaaaacaattttcctttattttatcttttgttatacaaatagctta 22759132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 27626209 - 27626251
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||||||||||| |||||| |||||||||| |||||||    
T  27626209 agtttgactttattttagcttttgatatagaaatagcttatac 27626251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 198
Target Start/End: Complemental strand, 28178950 - 28178912
Alignment:
Q  160 tgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  28178950 tgactttattttatcttttgttatagaaatagcttatac 28178912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 28340889 - 28340951
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctttt 178  Q
    |||||||||||||||||||||||||| ||||  ||  |||| |||||||| |||| |||||||    
T  28340889 aggatagcttatgaaaacagcttatagcttatatgacaacaatttgacttcatttcatctttt 28340951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 30180063 - 30180001
Alignment:
Q  129 aaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataa 191  Q
    ||||||||||||| ||||   | ||||| ||| |||||||||||||||||||||| |||||||    
T  30180063 aaaacagcttatagcttatacgaaaacaatttaactttattttatcttttgctatcgaaataa 30180001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 31002781 - 31002723
Alignment:
Q  121 agcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttg 179  Q
    ||||||| ||||||||||||| ||||  || ||| | ||||||||||||||||||||||    
T  31002781 agcttatcaaaacagcttatagcttatatgaaaatattttgactttattttatcttttg 31002723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 33894611 - 33894566
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||| ||||||||||||| |||||||||| |||||||    
T  33894611 aaacagtttgactt-attttatcttttgttatagaaatagcttatac 33894566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 35808989 - 35809031
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||||||| |||||||||||||| |||||||||| |||||||    
T  35808989 agtttgactatattttatcttttgttatagaaatagcttatac 35809031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 43152983 - 43153029
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| ||| |||||||||||||||||| |||||||||| |||||||    
T  43152983 aaacaatttaactttattttatcttttgttatagaaatagcttatac 43153029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 196
Target Start/End: Original strand, 44216866 - 44216900
Alignment:
Q  162 actttattttatcttttgctatagaaataacttat 196  Q
    ||||||||||||||||||||||||||| |||||||    
T  44216866 actttattttatcttttgctatagaaagaacttat 44216900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 44241904 - 44241803
Alignment:
Q  96 cttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataactta 195  Q
    |||||||||| ||||  |||| ||||||||||||||||| ||||||  |||     ||| ||||  |||||||||||||| ||| |||||||||||||||    
T  44241904 cttatttctataagctattcaagatagcttatgaaaacaacttataggttatacaaaaatagtta-actttattttatctgttgttatagaaataactta 44241806  T
Q  196 tac 198  Q
    |||    
T  44241805 tac 44241803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 45813268 - 45813306
Alignment:
Q  159 ttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  45813268 ttgactttattttatcttttggtatagaaatagcttata 45813306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 3468660 - 3468579
Alignment:
Q  95 acttatttctacaagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatctt 176  Q
    ||||||||| |||||  ||  ||||||| ||||||||| |||||||||||||   | ||| |||||||||| ||||||||||    
T  3468660 acttatttccacaagttctctaggatagattatgaaaaaagcttataacttatacgaaaatagtttgacttcattttatctt 3468579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 21853197 - 21853242
Alignment:
Q  152 aaacagtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||| ||| ||||||||||||||||||  ||||||||||||||||    
T  21853197 aaacaatttaactttattttatcttttgtaatagaaataacttata 21853242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 23434204 - 23434273
Alignment:
Q  117 ggatagcttatgaaaacagcttataacttacttggaaaca-gtttgactttattttatcttttgctatag 185  Q
    |||||||||||||||| |||| ||| |||| ||| |||||  ||||| |||||||||||||||| |||||    
T  23434204 ggatagcttatgaaaatagctaatagcttatttgaaaacacttttgattttattttatcttttgttatag 23434273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 24973936 - 24973895
Alignment:
Q  149 tggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||||||| ||||| |||||||||||||||| ||||||||||    
T  24973936 tggaaacaatttgaatttattttatcttttgttatagaaata 24973895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 28702776 - 28702731
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagttt 160  Q
    |||||||||||||||||||||  |||||||||| || |||||||||    
T  28702776 caggatagcttatgaaaacagtgtataacttacatgaaaacagttt 28702731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 197
Target Start/End: Complemental strand, 46082050 - 46081977
Alignment:
Q  125 tatgaaaacagcttataacttacttggaaacag-tttgactttattttatcttttgctatagaaataacttata 197  Q
    |||||||||| |||||||||||  || |||||| ||||||||| ||||| |||| | |||||||||| ||||||    
T  46082050 tatgaaaacaacttataacttatatgaaaacagttttgactttgttttaactttcgttatagaaatagcttata 46081977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 46281218 - 46281255
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataactta 195  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  46281218 tttgactttattttattttttgttatagaaataactta 46281255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 46825121 - 46825052
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaa 187  Q
    |||||||||||||||| | ||||  ||||  || ||||| |||||||||||||||||||||  |||||||    
T  46825121 gatagcttatgaaaacggtttatggcttatatgaaaacaatttgactttattttatctttttttatagaa 46825052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 4970881 - 4970913
Alignment:
Q  164 tttattttatcttttgctatagaaataacttat 196  Q
    ||||||||||||||||||||||||||| |||||    
T  4970881 tttattttatcttttgctatagaaatagcttat 4970913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 5715124 - 5715164
Alignment:
Q  157 gtttgactttattttatcttttgctatagaaataacttata 197  Q
    ||||||||||||||||||||| | |||||||||| ||||||    
T  5715124 gtttgactttattttatctttcgttatagaaatagcttata 5715164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 146
Target Start/End: Original strand, 18350754 - 18350782
Alignment:
Q  118 gatagcttatgaaaacagcttataactta 146  Q
    |||||||||||||||||||||||||||||    
T  18350754 gatagcttatgaaaacagcttataactta 18350782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 29278677 - 29278629
Alignment:
Q  123 cttatgaaaacagcttataacttacttggaaacagtttgactttatttt 171  Q
    |||||| ||||| |||||||||||| | |||||| ||||||||||||||    
T  29278677 cttatggaaacaacttataacttacatagaaacaatttgactttatttt 29278629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 40439100 - 40439052
Alignment:
Q  95 acttatttctacaagcccttcaggatagcttatgaaaacagcttataac 143  Q
    ||||||||| | |||| ||||||||||||| ||||||||| ||||||||    
T  40439100 acttatttccataagctcttcaggatagctaatgaaaacaacttataac 40439052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 47046153 - 47046229
Alignment:
Q  116 aggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataac 192  Q
    ||||||||||||||||||| ||   | ||||  || ||||| ||||||||||||||||| |||| | ||||||||||    
T  47046153 aggatagcttatgaaaacaactcggagcttatatgaaaacaatttgactttattttatcctttgttgtagaaataac 47046229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 49060523 - 49060483
Alignment:
Q  158 tttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  49060523 tttgactttattttattttttgttatagaaatagcttatac 49060483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 27599 - 27519
Alignment:
Q  118 gatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    ||||| ||||||||||| ||||||  |||  || ||||| ||||||||||||||||||| || ||||||||||||||||||    
T  27599 gatagtttatgaaaacaacttatagtttatatgaaaacaatttgactttattttatcttctgttatagaaataacttatac 27519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 190
Target Start/End: Complemental strand, 40265 - 40182
Alignment:
Q  107 aagcccttcaggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    |||| |||||||||| |||||||||||| |||||| ||||| |||||||   ||||||||| |||||||||| ||||| |||||    
T  40265 aagctcttcaggataacttatgaaaacaacttatagcttacatggaaacgacttgactttaatttatctttttctatataaata 40182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 117 - 198
Target Start/End: Original strand, 9821 - 9902
Alignment:
Q  117 ggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||| ||||||||||| | |||||||||  || ||||  |||||||| ||||||| ||||| ||||||||||||||||||    
T  9821 ggatagattatgaaaacaacctataacttatatgaaaactttttgacttaattttattttttgttatagaaataacttatac 9902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 1159 - 1201
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  1159 agtttgactttattttatcttttgttatagaaatagcttatac 1201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 2816 - 2774
Alignment:
Q  156 agtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  2816 agtttgactttattttatcttttgttatagaaatagcttatac 2774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 42638 - 42560
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttatac 198  Q
    |||||||||||||||| || ||| ||||  || |||||| || ||| |||||||||||||| ||||||||| ||||||||    
T  42638 atagcttatgaaaacaactaatagcttatatg-aaacaggtttactctattttatcttttgttatagaaatgacttatac 42560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 5712 - 5637
Alignment:
Q  115 caggatagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaata 190  Q
    ||||||| |||||||||||  |||||| ||||| |||||||   ||||||||| |||||||||| ||||| |||||    
T  5712 caggataacttatgaaaacgacttatagcttacatggaaacgacttgactttaatttatctttttctatataaata 5637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 196
Target Start/End: Original strand, 84177 - 84254
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatcttttgctatagaaataacttat 196  Q
    |||| ||| ||||||| || ||| ||||  || ||||| ||| || ||||||||||||||||||| ||||||||||||    
T  84177 atagtttacgaaaacaactcatatcttatatgaaaacaattttacattattttatcttttgctattgaaataacttat 84254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 4271 - 4327
Alignment:
Q  119 atagcttatgaaaacagcttataacttacttggaaacagtttgactttattttatct 175  Q
    ||||||||| |||||||||||||  |||  || |||| |||||||||||||||||||    
T  4271 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 4327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 1421 times since January 2019
Visitors: 1420