View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0121_low_1 (Length: 551)

Name: NF0121_low_1
Description: NF0121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0121_low_1
NF0121_low_1
[»] chr8 (37 HSPs)
chr8 (24-443)||(21832566-21832985)
chr8 (441-520)||(21408473-21408551)
chr8 (441-520)||(21802965-21803043)
chr8 (444-520)||(3303270-3303345)
chr8 (441-520)||(20134876-20134956)
chr8 (444-520)||(21834936-21835011)
chr8 (442-520)||(20131752-20131832)
chr8 (441-519)||(17007900-17007977)
chr8 (441-519)||(17540973-17541050)
chr8 (441-520)||(31709017-31709095)
chr8 (441-520)||(3300203-3300282)
chr8 (444-520)||(14676683-14676758)
chr8 (441-519)||(2309-2385)
chr8 (456-520)||(31711237-31711301)
chr8 (441-520)||(14673477-14673554)
chr8 (284-399)||(25553352-25553467)
chr8 (284-399)||(25558231-25558346)
chr8 (455-519)||(32231449-32231514)
chr8 (441-501)||(18973320-18973380)
chr8 (444-500)||(21945924-21945979)
chr8 (441-501)||(25502708-25502768)
chr8 (441-501)||(26908481-26908541)
chr8 (441-520)||(14369842-14369913)
chr8 (455-519)||(753444-753508)
chr8 (441-515)||(14366258-14366324)
chr8 (442-520)||(14370393-14370463)
chr8 (455-519)||(17526566-17526631)
chr8 (444-501)||(18977835-18977892)
chr8 (444-501)||(25560310-25560367)
chr8 (444-501)||(26905214-26905271)
chr8 (455-515)||(37718224-37718285)
chr8 (441-501)||(25548040-25548100)
chr8 (444-511)||(36281234-36281299)
chr8 (470-521)||(44754295-44754345)
chr8 (288-382)||(5011664-5011758)
chr8 (76-149)||(25553144-25553217)
chr8 (76-149)||(25558023-25558096)
[»] chr6 (26 HSPs)
chr6 (24-443)||(22465294-22465712)
chr6 (24-406)||(16686310-16686692)
chr6 (272-402)||(34332623-34332753)
chr6 (272-406)||(11701728-11701862)
chr6 (444-520)||(19573604-19573681)
chr6 (441-521)||(19577221-19577302)
chr6 (444-520)||(8668192-8668267)
chr6 (246-360)||(19021359-19021473)
chr6 (444-519)||(16688670-16688744)
chr6 (246-360)||(19013727-19013841)
chr6 (444-520)||(20090415-20090491)
chr6 (444-520)||(23606959-23607035)
chr6 (441-525)||(8650157-8650237)
chr6 (442-515)||(22467654-22467726)
chr6 (441-503)||(11231437-11231499)
chr6 (456-520)||(19011614-19011679)
chr6 (441-501)||(4282731-4282791)
chr6 (441-501)||(11694869-11694929)
chr6 (443-501)||(4279451-4279509)
chr6 (444-501)||(26460037-26460094)
chr6 (441-501)||(34336071-34336131)
chr6 (489-520)||(13727252-13727283)
chr6 (489-519)||(13728606-13728636)
chr6 (115-157)||(19013930-19013972)
chr6 (115-157)||(19021562-19021604)
chr6 (441-489)||(22622536-22622584)
[»] chr3 (35 HSPs)
chr3 (121-439)||(5193385-5193703)
chr3 (51-406)||(16089564-16089919)
chr3 (441-521)||(17593791-17593872)
chr3 (444-521)||(17601799-17601877)
chr3 (441-520)||(15417840-15417918)
chr3 (444-520)||(8854057-8854132)
chr3 (444-520)||(26900539-26900614)
chr3 (441-520)||(8856901-8856979)
chr3 (441-520)||(103344-103423)
chr3 (441-520)||(16082782-16082862)
chr3 (441-520)||(18556758-18556837)
chr3 (441-520)||(26907145-26907223)
chr3 (456-520)||(94496-94561)
chr3 (455-519)||(15926673-15926738)
chr3 (444-520)||(16091958-16092035)
chr3 (443-521)||(8368195-8368272)
chr3 (443-520)||(19767616-19767693)
chr3 (441-501)||(2689138-2689198)
chr3 (443-503)||(10776812-10776872)
chr3 (442-520)||(14789661-14789739)
chr3 (441-519)||(20012421-20012498)
chr3 (444-501)||(2692813-2692870)
chr3 (444-501)||(19790105-19790162)
chr3 (455-502)||(12206649-12206697)
chr3 (455-502)||(12209061-12209109)
chr3 (443-501)||(19777223-19777281)
chr3 (444-502)||(20008603-20008661)
chr3 (444-501)||(5195580-5195637)
chr3 (444-501)||(11133947-11134004)
chr3 (444-501)||(33481011-33481068)
chr3 (441-501)||(11137178-11137238)
chr3 (441-501)||(19808323-19808383)
chr3 (441-501)||(33484798-33484858)
chr3 (455-501)||(54110948-54110995)
chr3 (444-501)||(19803076-19803133)
[»] scaffold0202 (3 HSPs)
scaffold0202 (246-406)||(12397-12557)
scaffold0202 (444-521)||(10315-10391)
scaffold0202 (449-521)||(13807-13878)
[»] scaffold0071 (1 HSPs)
scaffold0071 (441-520)||(44320-44398)
[»] chr5 (19 HSPs)
chr5 (444-520)||(40936713-40936790)
chr5 (441-520)||(40933318-40933398)
chr5 (443-520)||(26857381-26857457)
chr5 (455-521)||(8460278-8460345)
chr5 (441-511)||(38836877-38836946)
chr5 (455-519)||(20680114-20680179)
chr5 (444-511)||(38840796-38840862)
chr5 (443-519)||(20675356-20675431)
chr5 (455-519)||(20671143-20671208)
chr5 (441-502)||(26863630-26863691)
chr5 (441-519)||(20675684-20675761)
chr5 (444-501)||(43041963-43042020)
chr5 (455-521)||(37256962-37257030)
chr5 (442-501)||(35415777-35415836)
chr5 (455-519)||(15212804-15212869)
chr5 (455-515)||(27073805-27073866)
chr5 (444-501)||(40569411-40569468)
chr5 (441-501)||(40572244-40572304)
chr5 (441-519)||(20679882-20679953)
[»] chr1 (21 HSPs)
chr1 (442-519)||(20435184-20435260)
chr1 (444-520)||(19751856-19751931)
chr1 (441-520)||(15158018-15158096)
chr1 (441-520)||(19749630-19749708)
chr1 (443-520)||(15142594-15142670)
chr1 (444-502)||(36910420-36910478)
chr1 (441-520)||(20442620-20442699)
chr1 (286-399)||(548085-548198)
chr1 (286-399)||(12100601-12100714)
chr1 (456-520)||(20514481-20514546)
chr1 (444-520)||(18433301-18433375)
chr1 (441-520)||(24280883-24280962)
chr1 (444-520)||(12020169-12020245)
chr1 (456-520)||(24276784-24276849)
chr1 (441-501)||(546075-546135)
chr1 (441-501)||(555360-555420)
chr1 (441-501)||(19913750-19913810)
chr1 (443-501)||(19911091-19911149)
chr1 (462-519)||(20194962-20195020)
chr1 (444-501)||(12098573-12098630)
chr1 (121-149)||(548335-548363)
[»] scaffold0369 (1 HSPs)
scaffold0369 (456-520)||(7666-7730)
[»] scaffold0018 (1 HSPs)
scaffold0018 (456-520)||(194709-194773)
[»] chr7 (27 HSPs)
chr7 (441-520)||(44357115-44357195)
chr7 (442-520)||(44360236-44360316)
chr7 (441-519)||(23532451-23532529)
chr7 (455-520)||(6202040-6202106)
chr7 (467-520)||(15932250-15932303)
chr7 (456-514)||(11544850-11544908)
chr7 (455-519)||(30096785-30096850)
chr7 (456-514)||(11527445-11527503)
chr7 (441-516)||(6198770-6198844)
chr7 (441-501)||(362087-362147)
chr7 (441-501)||(12538418-12538478)
chr7 (456-519)||(23517841-23517905)
chr7 (442-501)||(12529368-12529427)
chr7 (455-519)||(18016967-18017032)
chr7 (444-501)||(21627496-21627553)
chr7 (444-501)||(37278662-37278719)
chr7 (441-501)||(357356-357416)
chr7 (441-501)||(15834930-15834990)
chr7 (454-519)||(11734977-11735044)
chr7 (443-501)||(5328171-5328229)
chr7 (277-406)||(23524290-23524420)
chr7 (444-501)||(15828438-15828495)
chr7 (444-501)||(37973372-37973429)
chr7 (441-501)||(37282846-37282907)
chr7 (444-501)||(45486778-45486835)
chr7 (441-501)||(5332494-5332554)
chr7 (455-514)||(9214540-9214599)
[»] chr2 (16 HSPs)
chr2 (444-520)||(5771970-5772045)
chr2 (444-520)||(29603722-29603798)
chr2 (442-520)||(23696633-23696710)
chr2 (444-520)||(7310827-7310902)
chr2 (444-516)||(26126026-26126097)
chr2 (441-520)||(23692846-23692924)
chr2 (456-520)||(4876897-4876961)
chr2 (89-157)||(29585793-29585861)
chr2 (444-515)||(45279059-45279129)
chr2 (441-501)||(8164787-8164847)
chr2 (444-503)||(7395020-7395079)
chr2 (442-501)||(8168720-8168779)
chr2 (441-501)||(8998178-8998238)
chr2 (444-508)||(41325812-41325876)
chr2 (489-520)||(3071722-3071753)
chr2 (441-519)||(26382235-26382313)
[»] scaffold1778 (1 HSPs)
scaffold1778 (441-520)||(909-987)
[»] scaffold0320 (2 HSPs)
scaffold0320 (271-402)||(10235-10366)
scaffold0320 (455-521)||(12136-12203)
[»] scaffold0130 (1 HSPs)
scaffold0130 (441-520)||(14921-14999)
[»] scaffold0878 (1 HSPs)
scaffold0878 (456-520)||(4357-4421)
[»] scaffold0139 (2 HSPs)
scaffold0139 (278-426)||(7188-7336)
scaffold0139 (456-515)||(2856-2915)
[»] chr4 (18 HSPs)
chr4 (455-519)||(22751834-22751898)
chr4 (455-519)||(22763112-22763176)
chr4 (444-519)||(10757356-10757430)
chr4 (444-519)||(10970527-10970601)
chr4 (441-519)||(10755079-10755156)
chr4 (441-519)||(10968848-10968925)
chr4 (455-520)||(27789163-27789229)
chr4 (443-521)||(7202731-7202808)
chr4 (442-519)||(28924652-28924728)
chr4 (455-519)||(30953280-30953345)
chr4 (455-520)||(23882471-23882537)
chr4 (271-400)||(20501409-20501538)
chr4 (441-501)||(722864-722924)
chr4 (441-510)||(20494698-20494767)
chr4 (443-501)||(726438-726496)
chr4 (455-520)||(23878822-23878890)
chr4 (444-501)||(29724643-29724700)
chr4 (455-510)||(20503319-20503376)
[»] scaffold1505 (1 HSPs)
scaffold1505 (444-519)||(365-439)
[»] scaffold0264 (1 HSPs)
scaffold0264 (441-520)||(12946-13025)
[»] scaffold0167 (1 HSPs)
scaffold0167 (455-521)||(10407-10474)
[»] scaffold0179 (2 HSPs)
scaffold0179 (441-520)||(24948-25026)
scaffold0179 (443-521)||(27606-27683)
[»] scaffold0208 (1 HSPs)
scaffold0208 (441-520)||(1452-1531)
[»] scaffold0076 (1 HSPs)
scaffold0076 (441-519)||(36986-37063)
[»] scaffold0045 (1 HSPs)
scaffold0045 (441-520)||(78791-78869)
[»] scaffold0064 (1 HSPs)
scaffold0064 (455-516)||(25713-25775)
[»] scaffold0716 (1 HSPs)
scaffold0716 (441-517)||(2244-2319)
[»] scaffold0023 (2 HSPs)
scaffold0023 (456-521)||(149997-150063)
scaffold0023 (441-521)||(146790-146870)
[»] scaffold0013 (3 HSPs)
scaffold0013 (441-519)||(135725-135801)
scaffold0013 (455-519)||(133414-133478)
scaffold0013 (455-519)||(137943-138007)
[»] scaffold0010 (1 HSPs)
scaffold0010 (441-501)||(245294-245354)
[»] scaffold0438 (1 HSPs)
scaffold0438 (459-519)||(3849-3910)
[»] scaffold0009 (1 HSPs)
scaffold0009 (455-519)||(96209-96274)
[»] scaffold0272 (1 HSPs)
scaffold0272 (444-491)||(5062-5109)
[»] scaffold0888 (1 HSPs)
scaffold0888 (441-503)||(4198-4259)
[»] scaffold0056 (1 HSPs)
scaffold0056 (444-519)||(19315-19390)


Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 24 - 443
Target Start/End: Original strand, 21832566 - 21832985
Alignment:
Q  24 ccgaaaaagggacattctctacaatgaagcggtgatagttaaagtcacgataccaaaatgatgcatcaaaagctgcatccgcttccactgccaaagttct 123  Q
    |||||||||||||||| ||| | ||| | ||| |||||||||||||  | | ||||||||| || ||||||||||||||||| ||||| |  |||| |||    
T  21832566 ccgaaaaagggacattttcttccatgtaacggcgatagttaaagtcgtggtgccaaaatgaagcttcaaaagctgcatccgcctccaccgataaagctct 21832665  T
Q  124 tccgcctcctttccttcctgttttcattttcttcgcttgtggggagacgatcaggtcgtttacctcgtttacgatgacctcgccctcaactattttcttg 223  Q
    | |||||||||||||| |||||||||||||||||  |||||| |||||| |||||||||| |||||||| ||  |||||||||||||||||||||||| |    
T  21832666 ttcgcctcctttccttgctgttttcattttcttcttttgtggagagacggtcaggtcgttcacctcgttcaccgtgacctcgccctcaactattttctcg 21832765  T
Q  224 ggcacagtatccacatcgtcggcggcaggttcagagctggaaacattttctcttttcttcgttcctttacgaagaatcaccccagctgggtcacttgaga 323  Q
    |||||||||||||| ||| ||||| |||||||||||||||  || || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21832766 ggcacagtatccacctcgccggcgccaggttcagagctggcgacgttctctcttttcttcgttcctttacgaagaatcaccccagctgggtcacttgaga 21832865  T
Q  324 tatgttccccggaagcatgtttttctttgagagcttcaagatatttcctcctctcttttgcagataaaggcaacatcggcactacaaaaaagaaagaata 423  Q
    | || || |||| ||||||||||||||||||||| ||||| |||||||||||||||||| ||||||| |||||||||||||||  | |||||||||||||    
T  21832866 tgtgctctccggtagcatgtttttctttgagagcctcaaggtatttcctcctctcttttccagataagggcaacatcggcactgtacaaaagaaagaata 21832965  T
Q  424 aacgtatcagttaaaagaac 443  Q
    ||| ||||| | ||||||||    
T  21832966 aacatatcaatcaaaagaac 21832985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 441 - 520
Target Start/End: Complemental strand, 21408551 - 21408473
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||| |||||||||    
T  21408551 aactgtacttgcagaaaaagtacaataaggattctagggttaagaatcgtctattagggtttt-gactgaatattggata 21408473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 441 - 520
Target Start/End: Complemental strand, 21803043 - 21802965
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||| |||||||||    
T  21803043 aactgtacttgcagaaaaagtacaataaggattctagggttaagaatcgtctattagggtttt-gactgaatattggata 21802965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 444 - 520
Target Start/End: Complemental strand, 3303345 - 3303270
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| |||||||||    
T  3303345 tgtacttgcagaaaaagtacaataaggattctagggttaagaatcgtttattaggg-tttagactgaatattggata 3303270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 441 - 520
Target Start/End: Original strand, 20134876 - 20134956
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattaggg-ttttagactgattattggata 520  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| ||||    
T  20134876 aactgtacttgcataaaaagtacaataaggattctagggttaagaatcgtatactagggtttttagactgattattagata 20134956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 444 - 520
Target Start/End: Complemental strand, 21835011 - 21834936
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||| |||||||||    
T  21835011 tgtacttgcagaaaaagtacaataaggattctagggttaagaatcgtctattagggtttt-gactgaatattggata 21834936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 442 - 520
Target Start/End: Original strand, 20131752 - 20131832
Alignment:
Q  442 actgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattaggg--ttttagactgattattggata 520  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||  |||||||||||||||| ||||    
T  20131752 actgtacttgcataaaaagtacaataaggattctagggttaagaatcgtatactaggggtttttagactgattattagata 20131832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 441 - 519
Target Start/End: Complemental strand, 17007977 - 17007900
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    |||||||||||||  ||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||    
T  17007977 aactgtacttgca--aaaagtacaataagggattctagggttaagaatcggatattagggttttagactgattattggat 17007900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 441 - 519
Target Start/End: Original strand, 17540973 - 17541050
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    |||||||||||||  ||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||    
T  17540973 aactgtacttgca--aaaagtacaataagggattctagggttaagaatcggatattagggttttagactgattattggat 17541050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 441 - 520
Target Start/End: Complemental strand, 31709095 - 31709017
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||| |||| ||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  31709095 aactgtacttgcataaaa-gtacaataaagattctagggttaagaatcgtatactagggttttagactgattattagata 31709017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 441 - 520
Target Start/End: Complemental strand, 3300282 - 3300203
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattcta-gggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||| |||||||||||| |||||| ||||||| |||||||| |||||||||| |||||||||    
T  3300282 aactgtacttgcagaaaaagtaccataaggattctaggggttaagaatcgtttattaggg-tttagactgaatattggata 3300203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 444 - 520
Target Start/End: Complemental strand, 14676758 - 14676683
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| | |||||| |||| ||||| |||||||||    
T  14676758 tgtacttgcagaaaaagtacaataaggattctagggttaagaatcgtctcttaggg-tttatactgaatattggata 14676683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 441 - 519
Target Start/End: Original strand, 2309 - 2385
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataag-gattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    |||||||||||||  |||||||||||| | ||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  2309 aactgtacttgca--aaaagtacaataggtgattctagggttaagaatcgtatattagggtttt-gactgattattggat 2385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 456 - 520
Target Start/End: Complemental strand, 31711301 - 31711237
Alignment:
Q  456 aaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||| |||| |||||||| |||||||||| ||||||||||||||||||||| ||||    
T  31711301 aaaagtacaataaagattttagggttaagaatcgtatactagggttttagactgattattagata 31711237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 441 - 520
Target Start/End: Complemental strand, 14673554 - 14673477
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||| | |||||| |||| ||||| |||||||||    
T  14673554 aactgtacttgcagaaaaagtacaataaggattcta-ggttaagaatcgtctcttaggg-tttatactgaatattggata 14673477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 284 - 399
Target Start/End: Original strand, 25553352 - 25553467
Alignment:
Q  284 gttcctttacgaagaatcaccccagctgggtcacttgagatatgttccccggaagcatgtttttctttgagagcttcaagatatttcctcctctcttttg 383  Q
    ||||||||||||||||| |||||||| || |||||   |||||| || || ||||||| ||| |||||||||||||| | ||| || |||||||| |||     
T  25553352 gttcctttacgaagaatgaccccagccggatcactgacgatatgctctccagaagcatttttctctttgagagcttccaaatactttctcctctcctttc 25553451  T
Q  384 cagataaaggcaacat 399  Q
    |||||| |||||||||    
T  25553452 cagatagaggcaacat 25553467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 284 - 399
Target Start/End: Original strand, 25558231 - 25558346
Alignment:
Q  284 gttcctttacgaagaatcaccccagctgggtcacttgagatatgttccccggaagcatgtttttctttgagagcttcaagatatttcctcctctcttttg 383  Q
    ||||||||||||||||| |||||||| || |||||   |||||| || || ||||||| ||| |||||||||||||| | ||| || |||||||| |||     
T  25558231 gttcctttacgaagaatgaccccagccggatcactgacgatatgctctccagaagcatttttctctttgagagcttccaaatactttctcctctcctttc 25558330  T
Q  384 cagataaaggcaacat 399  Q
    |||||| |||||||||    
T  25558331 cagatagaggcaacat 25558346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 32231449 - 32231514
Alignment:
Q  455 aaaaagtacaataag-gattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    ||||||||||||| | ||||||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  32231449 aaaaagtacaataggtgattctagggttaagaatcgtatattagggttttagattgactattggat 32231514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 501
Target Start/End: Complemental strand, 18973380 - 18973320
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  ||||||||||||||||| |||||||| | |||||||    
T  18973380 aactgtacttgcagaaaaagtacggtaaggattctagggttaagaatcgtagactagggtt 18973320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 444 - 500
Target Start/End: Complemental strand, 21945979 - 21945924
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggt 500  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||    
T  21945979 tgtacttgcagaaaa-gtacaataaggattctagggttaagaatcgtatactagggt 21945924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 501
Target Start/End: Complemental strand, 25502768 - 25502708
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  ||||||||||||||||| |||||||| | |||||||    
T  25502768 aactgtacttgcagaaaaagtacggtaaggattctagggttaagaatcgtagactagggtt 25502708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 26908481 - 26908541
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  ||||||||||||||||| |||||||| | |||||||    
T  26908481 aactgtacttgcagaaaaagtacggtaaggattctagggttaagaatcgtagactagggtt 26908541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 441 - 520
Target Start/End: Complemental strand, 14369913 - 14369842
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||||||||||||||||||||||||||||||||||        |||||||||||||||||||| ||||| ||||| ||||    
T  14369913 aactgtacttgcagaaaaagtacaataaggattct--------gaatcgtatattagggtttttgactgtttattagata 14369842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 753508 - 753444
Alignment:
Q  455 aaaaagtacaataag-gattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||||||| |||||||| ||||||    
T  753508 aaaaagtacaataggtgattctagggttaagaatcgtatattagggtttt-gactgattgttggat 753444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 441 - 515
Target Start/End: Complemental strand, 14366324 - 14366258
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattatt 515  Q
    |||||||||||||||||||||||||||||||||||        |||||||||||||||||||| ||||| |||||    
T  14366324 aactgtacttgcagaaaaagtacaataaggattct--------gaatcgtatattagggtttttgactgtttatt 14366258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 442 - 520
Target Start/End: Complemental strand, 14370463 - 14370393
Alignment:
Q  442 actgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||||||||||        |||||||||||||||||||| ||||| ||||| ||||    
T  14370463 actgtacttgcagaaaaagtacaataaggattct--------gaatcgtatattagggtttttgactgtttattagata 14370393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 17526566 - 17526631
Alignment:
Q  455 aaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    |||| ||||||||||| |||||||||||| |||||  |||||||| ||||||||||||||||||||    
T  17526566 aaaatgtacaataagggattctagggttaagaatcagatattaggattttagactgattattggat 17526631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 444 - 501
Target Start/End: Complemental strand, 18977892 - 18977835
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||||||||||||  ||||||||||||||||| |||||||| | |||||||    
T  18977892 tgtacttgcagaaaaagtacggtaaggattctagggttaagaatcgtagactagggtt 18977835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 444 - 501
Target Start/End: Complemental strand, 25560367 - 25560310
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||||||||||||  ||||||||||||||||| |||||||| | |||||||    
T  25560367 tgtacttgcagaaaaagtacggtaaggattctagggttaagaatcgtagactagggtt 25560310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 444 - 501
Target Start/End: Original strand, 26905214 - 26905271
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||||||||||||  ||||||||||||||||| |||||||| | |||||||    
T  26905214 tgtacttgcagaaaaagtacggtaaggattctagggttaagaatcgtagactagggtt 26905271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 515
Target Start/End: Complemental strand, 37718285 - 37718224
Alignment:
Q  455 aaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattatt 515  Q
    ||||||||||||| || |||||||||||| |||||||||| || ||||||||||||||||||    
T  37718285 aaaaagtacaataggggattctagggttaagaatcgtatactaaggttttagactgattatt 37718224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 501
Target Start/End: Complemental strand, 25548100 - 25548040
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  ||| ||||||||||||| |||||| | |||||||||    
T  25548100 aactgtacttgcagaaaaagtacggtaaagattctagggttaagaatcgcagattagggtt 25548040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 511
Target Start/End: Original strand, 36281234 - 36281299
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgat 511  Q
    |||||||||| |||||||| ||||| ||||||||||||| ||||||| |||||||| |||||||||||    
T  36281234 tgtacttgca-aaaaagtataataatgattctagggttaagaatcgtctattaggg-tttagactgat 36281299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 470 - 521
Target Start/End: Complemental strand, 44754345 - 44754295
Alignment:
Q  470 gattctagggttacgaatcgtatattagggttttagactgattattggatat 521  Q
    ||||||||||||  |||| |||||||||||||| ||||||||||||||||||    
T  44754345 gattctagggttcagaattgtatattagggttt-agactgattattggatat 44754295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 288 - 382
Target Start/End: Complemental strand, 5011758 - 5011664
Alignment:
Q  288 ctttacgaagaatcaccccagctgggtcacttgagatatgttccccggaagcatgtttttctttgagagcttcaagatatttcctcctctctttt 382  Q
    |||| |||||||| ||||||||||| |||||||  ||||| || || |||||||  ||||| ||||| || ||||| |||||||| || ||||||    
T  5011758 ctttgcgaagaataaccccagctggatcacttgcaatatgctctccagaagcattcttttccttgagtgcctcaaggtatttccttctttctttt 5011664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 25553144 - 25553217
Alignment:
Q  76 ccaaaatgatgcatcaaaagctgcatccgcttccactgccaaagttcttccgcctcctttccttcctgttttca 149  Q
    ||||||||| |  |||||||| ||||| |||||  |||  |||  |||||||||||||||||||||||||||||    
T  25553144 ccaaaatgaggattcaaaagccgcatctgcttcagctgttaaaactcttccgcctcctttccttcctgttttca 25553217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 25558023 - 25558096
Alignment:
Q  76 ccaaaatgatgcatcaaaagctgcatccgcttccactgccaaagttcttccgcctcctttccttcctgttttca 149  Q
    ||||||||| |  |||||||| ||||| |||||  |||  |||  |||||||||||||||||||||||||||||    
T  25558023 ccaaaatgaggattcaaaagccgcatctgcttcagctgttaaaactcttccgcctcctttccttcctgttttca 25558096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 24 - 443
Target Start/End: Original strand, 22465294 - 22465712
Alignment:
Q  24 ccgaaaaagggacattctctacaatgaagcggtgatagttaaagtcacgataccaaaatgatgcatcaaaagctgcatccgcttccactgccaaagttct 123  Q
    |||| ||||||||||| ||| | ||| | ||| |||||||||||||  | | ||||||||| || |||||||| |  ||||| ||||| |  |||| |||    
T  22465294 ccgagaaagggacattttcttccatgtaacggcgatagttaaagtcgtggtgccaaaatgaagcttcaaaagc-gtgtccgcctccaccgataaagctct 22465392  T
Q  124 tccgcctcctttccttcctgttttcattttcttcgcttgtggggagacgatcaggtcgtttacctcgtttacgatgacctcgccctcaactattttcttg 223  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||| |||||||||| |||||||| ||  |||||||||||||||||||||||| |    
T  22465393 tccgcctcctttccttgctgttttcattttcttcttttgtggagagacggtcaggtcgttcacctcgttcaccgtgacctcgccctcaactattttctcg 22465492  T
Q  224 ggcacagtatccacatcgtcggcggcaggttcagagctggaaacattttctcttttcttcgttcctttacgaagaatcaccccagctgggtcacttgaga 323  Q
    |||||||||||||| ||| |||||||||||||||||||||  || || |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22465493 ggcacagtatccacctcgccggcggcaggttcagagctggcgacgttctctcttttcttcgttcctttacaaagaatcaccccagctgggtcacttgaga 22465592  T
Q  324 tatgttccccggaagcatgtttttctttgagagcttcaagatatttcctcctctcttttgcagataaaggcaacatcggcactacaaaaaagaaagaata 423  Q
    |||| || |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||| |||||||||||||||  | |||||||| ||||    
T  22465593 tatgctctccggaagcatgtttttctttgagagcctcaaggtatttcctcctctcttttccagataagggcaacatcggcactgtacaaaagaaataata 22465692  T
Q  424 aacgtatcagttaaaagaac 443  Q
    ||| ||||| | ||||||||    
T  22465693 aacatatcaatcaaaagaac 22465712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 24 - 406
Target Start/End: Original strand, 16686310 - 16686692
Alignment:
Q  24 ccgaaaaagggacattctctacaatgaagcggtgatagttaaagtcacgataccaaaatgatgcatcaaaagctgcatccgcttccactgccaaagttct 123  Q
    |||| ||||||||||| ||| | ||| | ||| | ||||| ||||| || | ||||||||| || ||||| || || || || ||||| |  |||| | |    
T  16686310 ccgagaaagggacattttcttccatgtaacggcggtagttgaagtcgcggtgccaaaatgaagcttcaaacgccgcgtcagcctccaccgataaagcttt 16686409  T
Q  124 tccgcctcctttccttcctgttttcattttcttcgcttgtggggagacgatcaggtcgtttacctcgtttacgatgacctcgccctcaactattttcttg 223  Q
    |||||||||||||||| |||||||||||||||||   |  ||||||||| |||||||||| ||||| || || || ||||| |||||| |||| ||||      
T  16686410 tccgcctcctttccttgctgttttcattttcttcttctagggggagacggtcaggtcgttcacctcattcaccataacctctccctcagctatcttctca 16686509  T
Q  224 ggcacagtatccacatcgtcggcggcaggttcagagctggaaacattttctcttttcttcgttcctttacgaagaatcaccccagctgggtcacttgaga 323  Q
    |||| ||||||||| ||| |||||||| |||||||| |||  || || |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16686510 ggcatagtatccacctcgccggcggcaagttcagagttggcgacgttctctcttttcttcgtacctttacgaagaatcaccccagctgggtcacttgaga 16686609  T
Q  324 tatgttccccggaagcatgtttttctttgagagcttcaagatatttcctcctctcttttgcagataaaggcaacatcggcact 406  Q
    ||||||| || ||||||||||||||||||||||| ||||| || ||||| ||||||||| | ||||| |||||| ||||||||    
T  16686610 tatgttctccagaagcatgtttttctttgagagcctcaaggtacttccttctctcttttccggataagggcaacgtcggcact 16686692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 272 - 402
Target Start/End: Complemental strand, 34332753 - 34332623
Alignment:
Q  272 tctcttttcttcgttcctttacgaagaatcaccccagctgggtcacttgagatatgttccccggaagcatgtttttctttgagagcttcaagatatttcc 371  Q
    |||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||| || || ||||||||||||||||||||||| || ||||| ||||    
T  34332753 tctcttttcttcgcgcctttgcgaagaatgaccccagctgggtcacttgatatatgctctccagaagcatgtttttctttgagagcctcgagatacttcc 34332654  T
Q  372 tcctctcttttgcagataaaggcaacatcgg 402  Q
    ||||||| ||| |||||||||||||||||||    
T  34332653 tcctctcctttccagataaaggcaacatcgg 34332623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 272 - 406
Target Start/End: Original strand, 11701728 - 11701862
Alignment:
Q  272 tctcttttcttcgttcctttacgaagaatcaccccagctgggtcacttgagatatgttccccggaagcatgtttttctttgagagcttcaagatatttcc 371  Q
    |||||||||||||  ||||||||||||| ||||||||| |||||||| |  |||||||| || ||||||| |||| |||| || ||||||||||| ||||    
T  11701728 tctcttttcttcgcacctttacgaagaaccaccccagcagggtcactggcaatatgttcgcctgaagcattttttgctttaagtgcttcaagatacttcc 11701827  T
Q  372 tcctctcttttgcagataaaggcaacatcggcact 406  Q
    ||||||| ||| | |||||||||||||| ||||||    
T  11701828 tcctctcctttcctgataaaggcaacattggcact 11701862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 444 - 520
Target Start/End: Original strand, 19573604 - 19573681
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattaggg-ttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| ||||    
T  19573604 tgtacttgcagaaaaagtacaataaggattctagggttaagaatcgtatactagggtttttagactgattattagata 19573681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 441 - 521
Target Start/End: Original strand, 19577221 - 19577302
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattaggg-ttttagactgattattggatat 521  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||| ||||||||||||||||| ||||    
T  19577221 aactgtacttgcagaaaaagtacaataaagattctagggttaagaatcgtatactagggtttttagactgattattgtatat 19577302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 444 - 520
Target Start/End: Complemental strand, 8668267 - 8668192
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| |||||||||    
T  8668267 tgtacttgcagaaaaagtacaataaggattctagggttaagaatcgtctattaggg-tttagactgaatattggata 8668192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 19021473 - 19021359
Alignment:
Q  246 cggcaggttcagagctggaaacattttctcttttcttcgttcctttacgaagaatcaccccagctgggtcacttgagatatgttccccggaagcatgttt 345  Q
    |||| |||||||| ||||||||||||||||||||||| | |||||| | ||| || || || ||||||||||| |  |||||||||||||||||||| ||    
T  19021473 cggcgggttcagaactggaaacattttctcttttcttggctcctttgcaaaggatgactccggctgggtcactcgctatatgttccccggaagcatgctt 19021374  T
Q  346 ttctttgagagcttc 360  Q
    |||||| ||||||||    
T  19021373 ttctttaagagcttc 19021359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 444 - 519
Target Start/End: Complemental strand, 16688744 - 16688670
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  16688744 tgtacctgcagaaaaagtacaataaggattctagggttaagaatcgtctattaggg-tttagactgaatattggat 16688670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 19013841 - 19013727
Alignment:
Q  246 cggcaggttcagagctggaaacattttctcttttcttcgttcctttacgaagaatcaccccagctgggtcacttgagatatgttccccggaagcatgttt 345  Q
    |||| |||||||| ||||||||||||||||||||||| | |||||| ||||| || |  || ||||||||||| |  |||||||||||||||||||| ||    
T  19013841 cggcgggttcagaactggaaacattttctcttttcttggctcctttgcgaaggatgattccggctgggtcactcgctatatgttccccggaagcatgctt 19013742  T
Q  346 ttctttgagagcttc 360  Q
     ||||| ||||||||    
T  19013741 ctctttaagagcttc 19013727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 444 - 520
Target Start/End: Original strand, 20090415 - 20090491
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||||||||| |||||||||||||||||||||||||||  |||||||||   ||||||||||||||||| |||||||    
T  20090415 tgtacttgcaaaaaaagtacaataaggattctagggttgagaatcgtatgcgagggttttagactgattcttggata 20090491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 444 - 520
Target Start/End: Original strand, 23606959 - 23607035
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||  |||||||||  |||||||||| ||||    
T  23606959 tgtacttgcagaaaaagtacagtaaggattctagggttaagaatcgtatgctagggttttttactgattattagata 23607035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 441 - 525
Target Start/End: Complemental strand, 8650237 - 8650157
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggatatgtga 525  Q
    ||||||||||||||||||||||   ||||||||||||||||| ||||||| |||||||| |||||||||| ||||||||| ||||    
T  8650237 aactgtacttgcagaaaaagta---taaggattctagggttaagaatcgtctattaggg-tttagactgaatattggatacgtga 8650157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 442 - 515
Target Start/End: Complemental strand, 22467726 - 22467654
Alignment:
Q  442 actgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattatt 515  Q
    ||||||||||||||||||||||||||| |||||||| |||| ||||||| |||||||| |||||||||| ||||    
T  22467726 actgtacttgcagaaaaagtacaataaagattctagtgttaagaatcgtctattaggg-tttagactgaatatt 22467654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 503
Target Start/End: Complemental strand, 11231499 - 11231437
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtttt 503  Q
    ||||||||||||| |||||||||||||| |||| |||||||| |||||||||| |||||||||    
T  11231499 aactgtacttgcataaaaagtacaataaagattttagggttaagaatcgtatactagggtttt 11231437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 456 - 520
Target Start/End: Original strand, 19011614 - 19011679
Alignment:
Q  456 aaaagtacaataaggattctagggttacgaatcgtatattaggg-ttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||| |||||||||  ||||| |||||||||||||||| ||||    
T  19011614 aaaagtacaataaggattctagggttaagaatcgtattctagggtttttagactgattattagata 19011679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 4282731 - 4282791
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  |||||||||||||| || |||||||| |||||||||    
T  4282731 aactgtacttgcagaaaaagtacggtaaggattctagggctaagaatcgtagattagggtt 4282791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 501
Target Start/End: Complemental strand, 11694929 - 11694869
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  |||||||||||||| || |||||||| |||||||||    
T  11694929 aactgtacttgcagaaaaagtacggtaaggattctagggctaagaatcgtagattagggtt 11694869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 443 - 501
Target Start/End: Original strand, 4279451 - 4279509
Alignment:
Q  443 ctgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||  |||||||||||||| || |||||||| |||||||||    
T  4279451 ctgtacttgcagaaaaagtacggtaaggattctagggctaagaatcgtagattagggtt 4279509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 444 - 501
Target Start/End: Complemental strand, 26460094 - 26460037
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||||||||||||  ||||||||||||||||| |||||||| | |||||||    
T  26460094 tgtacttgcagaaaaagtacggtaaggattctagggttaagaatcgtagactagggtt 26460037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 34336071 - 34336131
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  ||||||||||| || || |||||||| | |||||||    
T  34336071 aactgtacttgcagaaaaagtacggtaaggattctaaggctaagaatcgtagactagggtt 34336131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Original strand, 13727252 - 13727283
Alignment:
Q  489 gtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||||||||    
T  13727252 gtatattagggttttagactgattattggata 13727283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 519
Target Start/End: Original strand, 13728606 - 13728636
Alignment:
Q  489 gtatattagggttttagactgattattggat 519  Q
    |||||||||||||||||||||||||||||||    
T  13728606 gtatattagggttttagactgattattggat 13728636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 157
Target Start/End: Complemental strand, 19013972 - 19013930
Alignment:
Q  115 caaagttcttccgcctcctttccttcctgttttcattttcttc 157  Q
    ||||||||||||||||||||||||||||  |||||| ||||||    
T  19013972 caaagttcttccgcctcctttccttcctactttcatcttcttc 19013930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 157
Target Start/End: Complemental strand, 19021604 - 19021562
Alignment:
Q  115 caaagttcttccgcctcctttccttcctgttttcattttcttc 157  Q
    ||||||||||||||||||||||||||||  |||||| ||||||    
T  19021604 caaagttcttccgcctcctttccttcctactttcatcttcttc 19021562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 489
Target Start/End: Original strand, 22622536 - 22622584
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcg 489  Q
    |||||||||||||||||||||||  ||| ||||||||| ||| ||||||    
T  22622536 aactgtacttgcagaaaaagtacggtaaagattctaggattaagaatcg 22622584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 8e-44; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 121 - 439
Target Start/End: Original strand, 5193385 - 5193703
Alignment:
Q  121 tcttccgcctcctttccttcctgttttcattttcttcgcttgtggggagacgatcaggtcgtttacctcgtttacgatgacctcgccctcaactattttc 220  Q
    |||||||||||||||||||   |||||| ||||||| ||||| || || ||| ||| |||||  || || |  ||  | |||||||||||| || | |||    
T  5193385 tcttccgcctcctttccttgtcgttttctttttctttgcttgaggagaaacggtcaagtcgtgcacttcatccaccgtcacctcgccctcagctctcttc 5193484  T
Q  221 ttgggcacagtatccacatcgtcggcggcaggttcagagctggaaacattttctcttttcttcgttcctttacgaagaatcaccccagctgggtcacttg 320  Q
    |  |||| ||| || || ||| |||||||||| |||||||  | ||| |  |||||||||||||  ||||| |||||||| |||||| ||||||||||||    
T  5193485 tcaggcatagtttcgacctcgccggcggcaggctcagagcgtgcaacgtggtctcttttcttcgcacctttgcgaagaatgaccccaactgggtcacttg 5193584  T
Q  321 agatatgttccccggaagcatgtttttctttgagagcttcaagatatttcctcctctcttttgcagataaaggcaacatcggcactacaaaaaagaaaga 420  Q
    | ||||| || || ||||||||||||||||||||||| || ||||| ||||||||||| ||| ||||||| ||||||||||| ||| || |||||||||     
T  5193585 atatatgctctccagaagcatgtttttctttgagagcctcgagatacttcctcctctcctttccagataagggcaacatcggtactgcataaaagaaagg 5193684  T
Q  421 ataaacgtatcagttaaaa 439  Q
    ||||||| |||| ||||||    
T  5193685 ataaacgcatcaattaaaa 5193703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 51 - 406
Target Start/End: Original strand, 16089564 - 16089919
Alignment:
Q  51 agcggtgatagttaaagtcacgataccaaaatgatgcatcaaaagctgcatccgcttccactgccaaagttcttccgcctcctttccttcctgttttcat 150  Q
    ||||| ||||||| || ||||| | ||||||||| || ||||| || || || || |||||||  |||| |||||||||||||||||||  |||||||||    
T  16089564 agcggcgatagttgaaatcacggtgccaaaatgaagcttcaaacgccgcgtcagcctccactgataaagctcttccgcctcctttccttgatgttttcat 16089663  T
Q  151 tttcttcgcttgtggggagacgatcaggtcgtttacctcgtttacgatgacctcgccctcaactattttcttgggcacagtatccacatcgtcggcggca 250  Q
    |||||||   || ||  ||| | ||  |||||| ||||| || || || |||||||||||| |||| ||||  | || || ||| ||  || ||||| ||    
T  16089664 tttcttcttctggggaaagatggtcgcgtcgttcacctcattcaccataacctcgccctcagctatcttctcagacatagcatcaaccccgccggcgaca 16089763  T
Q  251 ggttcagagctggaaacattttctcttttcttcgttcctttacgaagaatcaccccagctgggtcacttgagatatgttccccggaagcatgtttttctt 350  Q
    |||||| |||||| |   || |||||||||||||  ||||||||||||||||||||||| ||||| |  ||||||||||| || |||||||  ||||| |    
T  16089764 ggttcaaagctggcagggttatctcttttcttcgcacctttacgaagaatcaccccagcagggtcgcaggagatatgttcgccagaagcattcttttcct 16089863  T
Q  351 tgagagcttcaagatatttcctcctctcttttgcagataaaggcaacatcggcact 406  Q
    |||| |||||||| || ||||| || |||||| | |||||||||| ||| ||||||    
T  16089864 tgagtgcttcaaggtacttccttctttcttttccggataaaggcagcattggcact 16089919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 441 - 521
Target Start/End: Complemental strand, 17593872 - 17593791
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggatat 521  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17593872 aactgtacttgcagaaaaagtacaataagggattctagggttaagaatcgtatattagggttttagactgattattggatat 17593791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 444 - 521
Target Start/End: Complemental strand, 17601877 - 17601799
Alignment:
Q  444 tgtacttgcagaaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggatat 521  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17601877 tgtacttgcagaaaaagtacaataagggattctagggttaagaatcgtatattagggttttagactgattattggatat 17601799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 441 - 520
Target Start/End: Complemental strand, 15417918 - 15417840
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  15417918 aactgtacttgcagaaag-gtacaataaggattctagggttaagaatcgtatattagggttttagactgactattggata 15417840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 444 - 520
Target Start/End: Original strand, 8854057 - 8854132
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| |||||||||    
T  8854057 tgtacttgcagaaaaagtacaataaggattctagggttaagaatcgtctattaggg-tttagactgaatattggata 8854132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 444 - 520
Target Start/End: Original strand, 26900539 - 26900614
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| |||||||||    
T  26900539 tgtacttgcagaaaaagtacaataaggattctagggttaagaatcgtctattaggg-tttagactgaatattggata 26900614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 441 - 520
Target Start/End: Original strand, 8856901 - 8856979
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||| |||||||||| |||||||||    
T  8856901 aactgtacttgcagaaaaagtacaataaggattctagggttaagaatcatctattaggg-tttagactgaatattggata 8856979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 441 - 520
Target Start/End: Original strand, 103344 - 103423
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattaggg-ttttagactgattattggata 520  Q
    ||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||    
T  103344 aactgtacttgcataaaa-gtacaataaggattctagggttaagaatcgtatattagggtttttagactgattattagata 103423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 441 - 520
Target Start/End: Complemental strand, 16082862 - 16082782
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattaggg-ttttagactgattattggata 520  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||| ||||    
T  16082862 aactgtacttgcataaaaagtacaataaggattctagggttaagaatcgtatactagggtttttagactggttattagata 16082782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 441 - 520
Target Start/End: Complemental strand, 18556837 - 18556758
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataa-ggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||| |||||||||| |||||||||    
T  18556837 aactgtacttgcagaaaaagtacaataaaggattctagggttaagaatcgtctattaggg-tttagactgaatattggata 18556758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 441 - 520
Target Start/End: Original strand, 26907145 - 26907223
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||| ||||||||||  ||||||||    
T  26907145 aactgtacttgcagaaaaagtacaataagaattctagggttaagaatcgtctattaggg-tttagactgaaaattggata 26907223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 456 - 520
Target Start/End: Original strand, 94496 - 94561
Alignment:
Q  456 aaaagtacaataaggattctagggttacgaatcgtatattaggg-ttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||    
T  94496 aaaagtacaataaggattctagggttaagaatcgtatattagggtttttagactgattattagata 94561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 15926673 - 15926738
Alignment:
Q  455 aaaaagtacaataaggattctagggttacgaatcgtatattaggg-ttttagactgattattggat 519  Q
    |||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||| ||||||||    
T  15926673 aaaaagtacaataaggattctagggttaagaatcgtatactagggtttttagactgaatattggat 15926738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 444 - 520
Target Start/End: Complemental strand, 16092035 - 16091958
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattaggg-ttttagactgattattggata 520  Q
    |||||||||| ||||||||||||||| |||||||||||| |||||||||| ||||| |||||||||| ||||| ||||    
T  16092035 tgtacttgcataaaaagtacaataagaattctagggttaagaatcgtatactagggtttttagactggttattagata 16091958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 443 - 521
Target Start/End: Original strand, 8368195 - 8368272
Alignment:
Q  443 ctgtacttgcagaaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggatat 521  Q
    |||||||||||  ||||||||||||||| |||||||| ||| ||||||||||||||| ||||||||||| ||||||||||    
T  8368195 ctgtacttgca--aaaagtacaataagggattctaggtttaagaatcgtatattaggattttagactgactattggatat 8368272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 443 - 520
Target Start/End: Original strand, 19767616 - 19767693
Alignment:
Q  443 ctgtacttgcagaaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||||||||||||||| ||||||||||| ||| |||||||| ||||| ||| |||||||||||||||||||||| ||||    
T  19767616 ctgtacttgcagaaaa-gtacaataagggattatagggttaagaatcatatcttagggttttagactgattattcgata 19767693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 501
Target Start/End: Complemental strand, 2689198 - 2689138
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||| |||||||||||  ||||||||||||||||| |||||||| |||||||||    
T  2689198 aactgtacttgtagaaaaagtacggtaaggattctagggttaagaatcgtagattagggtt 2689138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 443 - 503
Target Start/End: Original strand, 10776812 - 10776872
Alignment:
Q  443 ctgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtttt 503  Q
    ||||||||||||||||||||||  |||||||||||||||| |||| || ||||||||||||    
T  10776812 ctgtacttgcagaaaaagtacagaaaggattctagggttaagaattgtctattagggtttt 10776872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 442 - 520
Target Start/End: Original strand, 14789661 - 14789739
Alignment:
Q  442 actgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagg-gttttagactgattattggata 520  Q
    ||||||||||||||||| ||||  ||||||||||||||||  |||||||| ||||||  |||||||||||||||||||||    
T  14789661 actgtacttgcagaaaa-gtacggtaaggattctagggttgagaatcgtaaattaggatttttagactgattattggata 14789739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 441 - 519
Target Start/End: Original strand, 20012421 - 20012498
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    ||||||||| |||||||||||||  ||| ||||||||||||| ||||||| |||||||| |||||||| | ||||||||    
T  20012421 aactgtactggcagaaaaagtacggtaaagattctagggttaagaatcgtctattaggg-tttagactcaatattggat 20012498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 444 - 501
Target Start/End: Complemental strand, 2692870 - 2692813
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||| |||||||||||  ||||||||||||||||| |||||||| |||||||||    
T  2692870 tgtacttgtagaaaaagtacggtaaggattctagggttaagaatcgtagattagggtt 2692813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 444 - 501
Target Start/End: Complemental strand, 19790162 - 19790105
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||||||||||||  ||| ||||||||||||| |||||| |||||||||||    
T  19790162 tgtacttgcagaaaaagtacggtaaagattctagggttaagaatcgcatattagggtt 19790105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 455 - 502
Target Start/End: Original strand, 12206649 - 12206697
Alignment:
Q  455 aaaaagtacaataagg-attctagggttacgaatcgtatattagggttt 502  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||    
T  12206649 aaaaagtacaataagggattctagggttaagaatcgtatattagggttt 12206697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 455 - 502
Target Start/End: Original strand, 12209061 - 12209109
Alignment:
Q  455 aaaaagtacaataagg-attctagggttacgaatcgtatattagggttt 502  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||    
T  12209061 aaaaagtacaataagggattctagggttaggaatcgtatattagggttt 12209109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 501
Target Start/End: Original strand, 19777223 - 19777281
Alignment:
Q  443 ctgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||  ||| ||||||||||||| |||||| | |||||||||    
T  19777223 ctgtacttgcagaaaaagtacggtaaagattctagggttaagaatcgcagattagggtt 19777281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 502
Target Start/End: Original strand, 20008603 - 20008661
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttt 502  Q
    |||||| |||||||||||||  ||| ||||||||||||| ||||||| |||||||||||    
T  20008603 tgtactcgcagaaaaagtacggtaaagattctagggttaagaatcgtctattagggttt 20008661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 501
Target Start/End: Complemental strand, 5195637 - 5195580
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||| |||||||||||||  ||||||||||||||||| |||||||| | |||||||    
T  5195637 tgtactcgcagaaaaagtacggtaaggattctagggttaagaatcgtagactagggtt 5195580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 501
Target Start/End: Original strand, 11133947 - 11134004
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||||||||||||  |||||||||||||| || |||||||  |||||||||    
T  11133947 tgtacttgcagaaaaagtacggtaaggattctagggctaagaatcgtcgattagggtt 11134004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 501
Target Start/End: Original strand, 33481011 - 33481068
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||||||||||||  ||| ||||||||||||| |||||||| | |||||||    
T  33481011 tgtacttgcagaaaaagtacggtaaagattctagggttaagaatcgtagactagggtt 33481068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 11137178 - 11137238
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  |||||||||||||| || ||||| |  |||||||||    
T  11137178 aactgtacttgcagaaaaagtacggtaaggattctagggctaagaatcatcgattagggtt 11137238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 19808323 - 19808383
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  ||| ||||||| ||||| |||||| | |||||||||    
T  19808323 aactgtacttgcagaaaaagtacggtaaagattctaaggttaagaatcgcagattagggtt 19808383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 33484798 - 33484858
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||||||||||||||   ||| ||||||||||||| |||||||| | |||||||    
T  33484798 aactgtacttgcagaaaaagtatggtaaagattctagggttaagaatcgtagactagggtt 33484858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 501
Target Start/End: Complemental strand, 54110995 - 54110948
Alignment:
Q  455 aaaaagtacaataagg-attctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||| |||||||||||| |||||||||| |||||||    
T  54110995 aaaaagtacaataagggattctagggttaagaatcgtatactagggtt 54110948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 501
Target Start/End: Original strand, 19803076 - 19803133
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||||||||||||  |||  |||||||||||| |||||| | |||||||||    
T  19803076 tgtacttgcagaaaaagtacggtaaaaattctagggttaagaatcgcagattagggtt 19803133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 73; Significance: 4e-33; HSPs: 3)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 246 - 406
Target Start/End: Complemental strand, 12557 - 12397
Alignment:
Q  246 cggcaggttcagagctggaaacattttctcttttcttcgttcctttacgaagaatcaccccagctgggtcacttgagatatgttccccggaagcatgttt 345  Q
    ||||||||||||| |||||||| |||||||||||||| | |||||| ||||| || ||||||||||||||||| |  |||||||||||||||||| ||||    
T  12557 cggcaggttcagaactggaaacgttttctcttttcttggctcctttgcgaaggatgaccccagctgggtcactcgctatatgttccccggaagcacgttt 12458  T
Q  346 ttctttgagagcttcaagatatttcctcctctcttttgcagataaaggcaacatcggcact 406  Q
     |||||||||||||| |  || || ||||| || ||| |||||| ||||||||| ||||||    
T  12457 ctctttgagagcttccaagtactttctcctttcctttccagatagaggcaacatgggcact 12397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 444 - 521
Target Start/End: Original strand, 10315 - 10391
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggatat 521  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| |||| |||||    
T  10315 tgtacttgcagaaaaagtacaataaggattctagggttaagaatcgtctattaggg-tttagactgaatattagatat 10391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 449 - 521
Target Start/End: Original strand, 13807 - 13878
Alignment:
Q  449 ttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggatat 521  Q
    ||||| |||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| |||| |||||    
T  13807 ttgcaaaaaaagtacaataaggattctagggttaagaatcgtctattaggg-tttagactgaatattagatat 13878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 441 - 520
Target Start/End: Original strand, 44320 - 44398
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  44320 aactgtacttgcagaaag-gtacaataaggattctagggttaagaatcgtatattagggttttagactgactattggata 44398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 4e-24; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 444 - 520
Target Start/End: Complemental strand, 40936790 - 40936713
Alignment:
Q  444 tgtacttgcagaaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||| ||||||||||||||||||||||||||||||||    
T  40936790 tgtacttgcagaaaaagtacaataagggattatagggttaagaatagtatattagggttttagactgattattggata 40936713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 441 - 520
Target Start/End: Complemental strand, 40933398 - 40933318
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataagga-ttctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||||||| || |||||||| |||| |||| |||||||||||||||||||||||||||    
T  40933398 aactgtacttgcagaaaaagtacaataaggaattatagggttaagaatagtatgttagggttttagactgattattggata 40933318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 443 - 520
Target Start/End: Original strand, 26857381 - 26857457
Alignment:
Q  443 ctgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||||||| |||||||||    
T  26857381 ctgtacttgcagaaaaagtacagtaaggattctagggttaagaatcgtctattaggg-tttagactgaatattggata 26857457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 8460345 - 8460278
Alignment:
Q  455 aaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggatat 521  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  8460345 aaaaagtacaataaggtattctagggttaagaatcgtatattagggttttagactcattattggatat 8460278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 441 - 511
Target Start/End: Complemental strand, 38836946 - 38836877
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgat 511  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| |||||||||||    
T  38836946 aactgtacttgcagaaaaagtacaataatgattctagggttaagaatcgtctattaggg-tttagactgat 38836877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 20680114 - 20680179
Alignment:
Q  455 aaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    |||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||    
T  20680114 aaaaagtacaataagggattctagggttaagaatcgtatactagggttttagactgattattggat 20680179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 444 - 511
Target Start/End: Complemental strand, 38840862 - 38840796
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgat 511  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| |||||||||||    
T  38840862 tgtacttgcagaaaaagtacaataatgattctagggttaagaatcgtctattaggg-tttagactgat 38840796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 443 - 519
Target Start/End: Original strand, 20675356 - 20675431
Alignment:
Q  443 ctgtacttgcagaaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    |||||||||||  ||||||||||||||| |||||||||||| |||||||||| ||||||||||| || ||||||||||    
T  20675356 ctgtacttgca--aaaagtacaataagggattctagggttaagaatcgtatactagggttttagtcttattattggat 20675431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 20671143 - 20671208
Alignment:
Q  455 aaaaagtacaataa-ggattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    |||||||||||||| |||||||| ||||| |||||||||| |||||| ||||||||||||||||||    
T  20671143 aaaaagtacaataatggattctaaggttaagaatcgtatactagggtcttagactgattattggat 20671208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 441 - 502
Target Start/End: Original strand, 26863630 - 26863691
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttt 502  Q
    ||||||| ||||| |||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  26863630 aactgtatttgcataaaaagtacagtaaggattctagggttaagaatcgtctattagggttt 26863691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 519
Target Start/End: Original strand, 20675684 - 20675761
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    |||||||||||||  ||||||||||||||| |||||||||||| |||||||||| |||||||||| ||| ||||| ||||    
T  20675684 aactgtacttgca--aaaagtacaataagggattctagggttaagaatcgtatactagggttttaaacttattatcggat 20675761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 444 - 501
Target Start/End: Complemental strand, 43042020 - 43041963
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||||||||||||  ||||||||||||||||| |||||||| | |||||||    
T  43042020 tgtacttgcagaaaaagtacggtaaggattctagggttaagaatcgtagaatagggtt 43041963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 37256962 - 37257030
Alignment:
Q  455 aaaaagtacaataag-gattctaggg-ttacgaatcgtatattagggttttagactgattattggatat 521  Q
    ||||||||||||| | |||||||||| ||| |||||||||||||||||||  |||||||||||||||||    
T  37256962 aaaaagtacaataggtgattctaggggttaagaatcgtatattagggtttatgactgattattggatat 37257030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 442 - 501
Target Start/End: Complemental strand, 35415836 - 35415777
Alignment:
Q  442 actgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||| |||||||||  ||||||||||||||||| |||||||| | |||||||    
T  35415836 actgtacttgcaaaaaaagtacggtaaggattctagggttaagaatcgtagactagggtt 35415777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 15212804 - 15212869
Alignment:
Q  455 aaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    |||||||||||||||| |||||||||| | ||||||| |||||||||  |||| ||||||||||||    
T  15212804 aaaaagtacaataagggattctagggtaaagaatcgtgtattagggtagtagattgattattggat 15212869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 455 - 515
Target Start/End: Complemental strand, 27073866 - 27073805
Alignment:
Q  455 aaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattatt 515  Q
    |||||||||||||||| |||||| |||||  ||||||||| |||| ||||||||||||||||    
T  27073866 aaaaagtacaataagggattctaaggttaaaaatcgtatactaggtttttagactgattatt 27073805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 501
Target Start/End: Original strand, 40569411 - 40569468
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||||||||||||  ||| ||||||||||||| |||||| | |||||||||    
T  40569411 tgtacttgcagaaaaagtacggtaaagattctagggttaagaatcgcagattagggtt 40569468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 40572244 - 40572304
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  ||| |||| |||||||| |||||| | |||||||||    
T  40572244 aactgtacttgcagaaaaagtacggtaaagattttagggttaagaatcgcagattagggtt 40572304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 519
Target Start/End: Original strand, 20679882 - 20679953
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    |||||||||||||  |||||||||||||||      |||||| |||||||||| ||||||||||||| |||||||||||    
T  20679882 aactgtacttgca--aaaagtacaataaggg-----gggttaagaatcgtatactagggttttagaccgattattggat 20679953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 4e-24; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 442 - 519
Target Start/End: Original strand, 20435184 - 20435260
Alignment:
Q  442 actgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  20435184 actgtacttgcagaaaaagtacaataaggattctagggttaagaatcgtctattaggg-tttagactgaatattggat 20435260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 444 - 520
Target Start/End: Complemental strand, 19751931 - 19751856
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||| |||||||||    
T  19751931 tgtacttgcagaaaaagtacaataaggattctagggttaagaatcgtctattagggtttt-gactgaatattggata 19751856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 441 - 520
Target Start/End: Original strand, 15158018 - 15158096
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||  |||||||||    
T  15158018 aactgtacttgcagaaaaagtacaataaggattctagggttaagaatcgtctattaggg-tttagactgtatattggata 15158096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 441 - 520
Target Start/End: Complemental strand, 19749708 - 19749630
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||| |||| ||||    
T  19749708 aactgtacttgcagaaaaagtacaataaggattctagggttaagaatcgtctattagggtttt-gactgaatattagata 19749630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 443 - 520
Target Start/End: Original strand, 15142594 - 15142670
Alignment:
Q  443 ctgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||  |||||||||    
T  15142594 ctgttcttgcagaaaaagtacaataaggattctagggttaagaatcgtatattaggg-tttagactgtatattggata 15142670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 444 - 502
Target Start/End: Original strand, 36910420 - 36910478
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttt 502  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  36910420 tgtacttgcagaaaaagtacaataaggattctagggttaagaatcgtctattagggttt 36910478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 441 - 520
Target Start/End: Complemental strand, 20442699 - 20442620
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattaggg-ttttagactgattattggata 520  Q
    ||||||||||||| |||| ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| ||||    
T  20442699 aactgtacttgcataaaa-gtacaataaggattctagggttaagaatcgtatactagggtttttagactgattattagata 20442620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 548198 - 548085
Alignment:
Q  286 tcctttacgaagaatcaccccagctgggtcacttgagatatgttccccggaagcatgtttttctttgagagcttcaagatatttcctcctctcttttgca 385  Q
    |||||||||||| || ||||||||||| ||||| | |||||| || || ||||| | |||||||||||||||||| | ||| || |||||||| ||| ||    
T  548198 tcctttacgaaggatgaccccagctggatcactggcgatatgctctccagaagcgtttttttctttgagagcttccaaatactttctcctctcctttcca 548099  T
Q  386 gataaaggcaacat 399  Q
    |||| |||||||||    
T  548098 gatagaggcaacat 548085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 12100714 - 12100601
Alignment:
Q  286 tcctttacgaagaatcaccccagctgggtcacttgagatatgttccccggaagcatgtttttctttgagagcttcaagatatttcctcctctcttttgca 385  Q
    |||||||||||| || |||||||| || ||||||| |||||| || || ||||||| ||| ||||||| |||||| | ||| || |||||||||||| ||    
T  12100714 tcctttacgaaggatgaccccagccggatcacttgcgatatgctctccagaagcatttttctctttgatagcttccaaatactttctcctctcttttcca 12100615  T
Q  386 gataaaggcaacat 399  Q
    |||| |||||||||    
T  12100614 gatagaggcaacat 12100601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 456 - 520
Target Start/End: Complemental strand, 20514546 - 20514481
Alignment:
Q  456 aaaagtacaataaggattctagggttacgaatcgtatattaggg-ttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| ||||    
T  20514546 aaaagtacaataaggattctagggttaagaatcgtatactagggtttttagactgattattagata 20514481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 444 - 520
Target Start/End: Complemental strand, 18433375 - 18433301
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||| || ||||||||||| |||||| ||||    
T  18433375 tgtacttgcagaaaa-gtacaataaggattctagggttaagaatcgtatacta-ggttttagactaattattagata 18433301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 441 - 520
Target Start/End: Original strand, 24280883 - 24280962
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcg-tatattagggttttagactgattattggata 520  Q
    ||||||||||||| |||| ||||||||||||||||||||||| |||||| |||| |||||||| |||||||||||| ||||    
T  24280883 aactgtacttgcacaaaa-gtacaataaggattctagggttaagaatcgttatactagggtttaagactgattattcgata 24280962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 444 - 520
Target Start/End: Original strand, 12020169 - 12020245
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatatta-gggttttagactgattattggata 520  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||  || || |||||||||||||||| ||||    
T  12020169 tgtacttgcagaaaa-gtacaataaggattctagggttaagaatcgtattctatggtttttagactgattattagata 12020245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 456 - 520
Target Start/End: Original strand, 24276784 - 24276849
Alignment:
Q  456 aaaagtacaataaggattctagggttacgaatcg-tatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||| |||||| |||| |||||||| |||||||||||| ||||    
T  24276784 aaaagtacaataaggattctagggttaagaatcgttatactagggtttaagactgattattcgata 24276849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 546075 - 546135
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  ||| ||||||||||||| |||||| | |||||||||    
T  546075 aactgtacttgcagaaaaagtacggtaaagattctagggttaagaatcgcagattagggtt 546135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 555360 - 555420
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  ||| ||||||||||||| |||||| | |||||||||    
T  555360 aactgtacttgcagaaaaagtacggtaaagattctagggttaagaatcgcagattagggtt 555420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 19913750 - 19913810
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  ||| ||||||||||||| |||||| | |||||||||    
T  19913750 aactgtacttgcagaaaaagtacggtaaagattctagggttaagaatcgcagattagggtt 19913810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 501
Target Start/End: Original strand, 19911091 - 19911149
Alignment:
Q  443 ctgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||  ||| ||||||||||||| |||||| | |||||||||    
T  19911091 ctgtacttgcagaaaaagtacggtaaagattctagggttaagaatcgcagattagggtt 19911149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 519
Target Start/End: Complemental strand, 20195020 - 20194962
Alignment:
Q  462 acaataaggattctagggttacgaatcgtatattaggg-ttttagactgattattggat 519  Q
    ||||||||||||||| ||||| ||||||| || ||||| ||||||||||| ||||||||    
T  20195020 acaataaggattctatggttaagaatcgtgtactagggtttttagactgaatattggat 20194962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 501
Target Start/End: Original strand, 12098573 - 12098630
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||| |||||||||||||  ||| ||||||||||||| |||||| | |||||||||    
T  12098573 tgtactcgcagaaaaagtacggtaaagattctagggttaagaatcgcagattagggtt 12098630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 149
Target Start/End: Complemental strand, 548363 - 548335
Alignment:
Q  121 tcttccgcctcctttccttcctgttttca 149  Q
    |||||||||||||||||||||||||||||    
T  548363 tcttccgcctcctttccttcctgttttca 548335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 456 - 520
Target Start/End: Complemental strand, 7730 - 7666
Alignment:
Q  456 aaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  7730 aaaagtacaataaggattctagggttaagaatcgtatactagggttttagactgattattggata 7666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 456 - 520
Target Start/End: Complemental strand, 194773 - 194709
Alignment:
Q  456 aaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  194773 aaaagtacaataaggattctagggttaagaatcgtatactagggttttagactgattattggata 194709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 2e-23; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 441 - 520
Target Start/End: Complemental strand, 44357195 - 44357115
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattaggg-ttttagactgattattggata 520  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| ||||    
T  44357195 aactgtacttgcataaaaagtacaataaggattctagggttaagaatcgtatactagggtttttagactgattattagata 44357115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 442 - 520
Target Start/End: Complemental strand, 44360316 - 44360236
Alignment:
Q  442 actgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattaggg--ttttagactgattattggata 520  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||  |||||||||||||||| ||||    
T  44360316 actgtacttgcataaaaagtacaataaggattctagggttaagaatcgtatactaggggtttttagactgattattagata 44360236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 441 - 519
Target Start/End: Original strand, 23532451 - 23532529
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttt-tagactgattattggat 519  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| |||||||| ||||||||    
T  23532451 aactgtacttgcagaaaa-gtacaataaggattctagggttaagaatcgtctattagggtttatagactgactattggat 23532529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 455 - 520
Target Start/End: Complemental strand, 6202106 - 6202040
Alignment:
Q  455 aaaaagtacaataag-gattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  6202106 aaaaagtacaataagagattatagggttatgaatcgtatattagggttttagactgattattggata 6202040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 467 - 520
Target Start/End: Original strand, 15932250 - 15932303
Alignment:
Q  467 aaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15932250 aaggattctagggttaagaatcgtatattagggttttagactgattattggata 15932303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 456 - 514
Target Start/End: Complemental strand, 11544908 - 11544850
Alignment:
Q  456 aaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattat 514  Q
    ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||    
T  11544908 aaaagtacaataaggattctagggttaagaatcgtatactaggattttagactgattat 11544850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 30096850 - 30096785
Alignment:
Q  455 aaaaagtacaataag-gattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    ||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  30096850 aaaaagtacgataagagattctagggttaagaatcgtatattagggttttagactgattatcggat 30096785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 456 - 514
Target Start/End: Complemental strand, 11527503 - 11527445
Alignment:
Q  456 aaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattat 514  Q
    |||||||||||||||||| ||| |||| |||||||||| ||||||||||||||||||||    
T  11527503 aaaagtacaataaggattatagtgttaagaatcgtatactagggttttagactgattat 11527445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 441 - 516
Target Start/End: Complemental strand, 6198844 - 6198770
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattg 516  Q
    |||||||||||||  ||||||||||||||| |||||| | ||| ||||||||||||||||||||||| |||||||||    
T  6198844 aactgtacttgca--aaaagtacaataagggattctaagattaagaatcgtatattagggttttagagtgattattg 6198770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 362087 - 362147
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  |||||||||||||| || |||||||| |||||||||    
T  362087 aactgtacttgcagaaaaagtacggtaaggattctagggctaagaatcgtagattagggtt 362147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 12538418 - 12538478
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  ||||||||||||||||| |||||||| | |||||||    
T  12538418 aactgtacttgcagaaaaagtacggtaaggattctagggttaagaatcgtagactagggtt 12538478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 456 - 519
Target Start/End: Original strand, 23517841 - 23517905
Alignment:
Q  456 aaaagtacaataaggattctagggttacgaatcgtatattaggg-ttttagactgattattggat 519  Q
    ||||||| ||||||||||||||||||| ||||||| |||||||| ||||||||||| ||||||||    
T  23517841 aaaagtataataaggattctagggttaagaatcgtctattagggtttttagactgactattggat 23517905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 442 - 501
Target Start/End: Original strand, 12529368 - 12529427
Alignment:
Q  442 actgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||| | |||||||    
T  12529368 actgtacttgcagaaaaagtacggtaaggattctagggttaagaatcgtagactagggtt 12529427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 18017032 - 18016967
Alignment:
Q  455 aaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    |||||||||||||||| |||||||||||| |||| |||||  || |||||||||||||||||||||    
T  18017032 aaaaagtacaataagggattctagggttaagaattgtataccagagttttagactgattattggat 18016967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 444 - 501
Target Start/End: Complemental strand, 21627553 - 21627496
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||||||||||||  ||||||||||||||||| |||||||| | |||||||    
T  21627553 tgtacttgcagaaaaagtacggtaaggattctagggttaagaatcgtagactagggtt 21627496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 444 - 501
Target Start/End: Original strand, 37278662 - 37278719
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||| ||||||||| |||||||||||||||||| |||||||| | |||||||    
T  37278662 tgtacttgcaaaaaaagtacgataaggattctagggttaagaatcgtagactagggtt 37278719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 357356 - 357416
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||||||||||||||   |||||||||||||| || |||||||| |||||||||    
T  357356 aactgtacttgcagaaaaagtaaggtaaggattctagggctaagaatcgtagattagggtt 357416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 15834930 - 15834990
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  ||| ||||||||||||| |||||||| | |||||||    
T  15834930 aactgtacttgcagaaaaagtacggtaaagattctagggttaagaatcgtagactagggtt 15834990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 454 - 519
Target Start/End: Complemental strand, 11735044 - 11734977
Alignment:
Q  454 gaaaaagtacaataagg-attctagggttacgaatcgtatattagggttttag-actgattattggat 519  Q
    ||||||| ||||||||| |||||||||||| |||||||||  ||||||||||| ||||||||||||||    
T  11735044 gaaaaagcacaataagggattctagggttaagaatcgtattctagggttttagaactgattattggat 11734977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 501
Target Start/End: Original strand, 5328171 - 5328229
Alignment:
Q  443 ctgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||  ||| ||||||||||||| |||||| | |||||||||    
T  5328171 ctgtacttgcagaaaaagtacggtaaagattctagggttaagaatcgcagattagggtt 5328229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 406
Target Start/End: Complemental strand, 23524420 - 23524290
Alignment:
Q  277 tttcttcgttcctttacgaagaatcaccccagctgggtcacttgagatatgttccccggaagcatgtttttctttgagagctt-caagatatttcctcct 375  Q
    ||||||||| ||||| || || ||||| ||||  ||||| ||||  || ||||| ||||| |||| ||||||||| || |||| | || |||||||||||    
T  23524420 tttcttcgtccctttgcggaggatcacgccagtagggtcgcttgctatgtgttctccggatgcatatttttctttaagggctttcgaggtatttcctcct 23524321  T
Q  376 ctcttttgcagataaaggcaacatcggcact 406  Q
    ||||||  |||||||||||| ||| ||||||    
T  23524320 ctctttcccagataaaggcagcattggcact 23524290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 501
Target Start/End: Original strand, 15828438 - 15828495
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||||||||||||  ||| ||||||||||||| |||||||| | |||||||    
T  15828438 tgtacttgcagaaaaagtacggtaaagattctagggttaagaatcgtagactagggtt 15828495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 501
Target Start/End: Original strand, 37973372 - 37973429
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||||||||||||  ||| ||||||||||||| |||||| | |||||||||    
T  37973372 tgtacttgcagaaaaagtacggtaaagattctagggttaagaatcgcagattagggtt 37973429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 37282846 - 37282907
Alignment:
Q  441 aactgtacttgcagaaaaa-gtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||||| ||||| ||||  ||||||||||||||||| |||||||| | |||||||    
T  37282846 aactgtacttgcaaaaaaaagtacggtaaggattctagggttaagaatcgtagactagggtt 37282907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 501
Target Start/End: Complemental strand, 45486835 - 45486778
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||| |||||||||||||  ||| ||||||||||||| |||||| | |||||||||    
T  45486835 tgtactcgcagaaaaagtacggtaaagattctagggttaagaatcgcagattagggtt 45486778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 5332494 - 5332554
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||| || ||||||||||  ||| ||||||||||||| |||||| | |||||||||    
T  5332494 aactgtactagccgaaaaagtacggtaaagattctagggttaagaatcgcagattagggtt 5332554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 514
Target Start/End: Original strand, 9214540 - 9214599
Alignment:
Q  455 aaaaagtacaataag-gattctagggttacgaatcgtatattagggttttagactgattat 514  Q
    |||||| |||||||| ||||||||||||| |||||||| | ||||| ||||||||||||||    
T  9214540 aaaaagcacaataagagattctagggttaagaatcgtaaactaggg-tttagactgattat 9214599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 2e-23; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 444 - 520
Target Start/End: Complemental strand, 5772045 - 5771970
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| |||||||||    
T  5772045 tgtacttgcagaaaaagtacaataaggattctagggttaagaatcgtctattaggg-tttagactgaatattggata 5771970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 444 - 520
Target Start/End: Original strand, 29603722 - 29603798
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||| ||||||| ||||||||    
T  29603722 tgtacttgcagaaaaagtacaataaggattctagggttcagaatcgtctattagggtttttgactgataattggata 29603798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 442 - 520
Target Start/End: Complemental strand, 23696710 - 23696633
Alignment:
Q  442 actgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| ||||||||| |||||||||    
T  23696710 actgtacttgcagaaaa-gtacaacaaggattctagggttaagaatcgtatattagggtcttagactgactattggata 23696633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 444 - 520
Target Start/End: Original strand, 7310827 - 7310902
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||| |||||||||| |||||||||    
T  7310827 tgtacttgcagaaaaagtacaataaggattctagggttaagaaacgtctattaggg-tttagactgaatattggata 7310902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 444 - 516
Target Start/End: Original strand, 26126026 - 26126097
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattg 516  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| |||||    
T  26126026 tgtacttgcagaaaaagtacaataaggattctagggttaagaatcgtctattaggg-tttagactgaatattg 26126097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 441 - 520
Target Start/End: Complemental strand, 23692924 - 23692846
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||||||||||||||||| |||||| |||||||||||||||| |||||||||| |||||| ||||||||| |||||||||    
T  23692924 aactgtacttgcagaaaa-gtacaacaaggattctagggttaagaatcgtataatagggtattagactgactattggata 23692846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 456 - 520
Target Start/End: Complemental strand, 4876961 - 4876897
Alignment:
Q  456 aaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||| |||| |||||||| |||||||||| ||||||||||||||||||||| ||||    
T  4876961 aaaagtacaataaagattttagggttaagaatcgtatactagggttttagactgattattagata 4876897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 29585861 - 29585793
Alignment:
Q  89 tcaaaagctgcatccgcttccactgccaaagttcttccgcctcctttccttcctgttttcattttcttc 157  Q
    |||||||||||||| || ||||||| ||||| ||||| |||||||||||| ||||||||||||||||||    
T  29585861 tcaaaagctgcatcagcctccactgacaaagctcttctgcctcctttcctccctgttttcattttcttc 29585793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 444 - 515
Target Start/End: Complemental strand, 45279129 - 45279059
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattatt 515  Q
    |||||||||||| |||||||||||||||| ||||||||| ||||||| |||||||| |||||||||| ||||    
T  45279129 tgtacttgcagataaagtacaataaggatcctagggttaagaatcgtctattaggg-tttagactgaatatt 45279059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 501
Target Start/End: Complemental strand, 8164847 - 8164787
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  ||||||||||||||||| |||||||| | |||||||    
T  8164847 aactgtacttgcagaaaaagtacggtaaggattctagggttaagaatcgtagactagggtt 8164787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 444 - 503
Target Start/End: Original strand, 7395020 - 7395079
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtttt 503  Q
    ||||||||||||||||||||  |||||||||||||| || |||||||| |||||||||||    
T  7395020 tgtacttgcagaaaaagtacggtaaggattctagggctaagaatcgtagattagggtttt 7395079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 442 - 501
Target Start/End: Complemental strand, 8168779 - 8168720
Alignment:
Q  442 actgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||| | |||||||    
T  8168779 actgtacttgcagaaaaagtacggtaaggattctagggttaagaatcgtagactagggtt 8168720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 501
Target Start/End: Complemental strand, 8998238 - 8998178
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  ||| ||||||||||||| |||||||| | |||||||    
T  8998238 aactgtacttgcagaaaaagtacggtaaagattctagggttaagaatcgtagactagggtt 8998178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 508
Target Start/End: Original strand, 41325812 - 41325876
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagact 508  Q
    ||||||||||||||||||| ||||| ||||||||||||  ||||||| ||||||  |||||||||    
T  41325812 tgtacttgcagaaaaagtataataaagattctagggttcagaatcgtctattagaattttagact 41325876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 520
Target Start/End: Complemental strand, 3071753 - 3071722
Alignment:
Q  489 gtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||||||||    
T  3071753 gtatattagggttttagactgattattggata 3071722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 519
Target Start/End: Complemental strand, 26382313 - 26382235
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataag-gattctagggttacgaatcgtatattagggttttag-actgattattggat 519  Q
    |||||||||||||  |||||||||||||| ||||||||| ||| | |||||||  ||||||||||| | ||||||||||||    
T  26382313 aactgtacttgca--aaaagtacaataagagattctaggattaagcatcgtattctagggttttagaattgattattggat 26382235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1778 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold1778
Description:

Target: scaffold1778; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 441 - 520
Target Start/End: Original strand, 909 - 987
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||||||| |||||||||    
T  909 aactgtacttgcagaaaaagtacactaaggattctagggttaagaatcgtctattaggg-tttagactgaatattggata 987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 271 - 402
Target Start/End: Original strand, 10235 - 10366
Alignment:
Q  271 ttctcttttcttcgttcctttacgaagaatcaccccagctgggtcacttgagatatgttccccggaagcatgtttttctttgagagcttcaagatatttc 370  Q
    ||||||||||||||| ||||| |||||||| || ||| ||||||| ||||  || ||||| ||||| |||| ||||| ||| ||||||||||| || ||     
T  10235 ttctcttttcttcgtccctttgcgaagaattacgccaactgggtcgcttgctatgtgttctccggatgcatttttttatttaagagcttcaaggtacttt 10334  T
Q  371 ctcctctcttttgcagataaaggcaacatcgg 402  Q
    |||||||||||  |||||||||||||||||||    
T  10335 ctcctctctttcccagataaaggcaacatcgg 10366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 455 - 521
Target Start/End: Complemental strand, 12203 - 12136
Alignment:
Q  455 aaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggatat 521  Q
    |||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  12203 aaaaagtacaataagggattctagggttaagaatcatatattagggttttagactgattattggatat 12136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 441 - 520
Target Start/End: Original strand, 14921 - 14999
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| |||||||||    
T  14921 aactgtacttgtagaaaaagtacaataaggattctagggttaagaatcgtctattaggg-tttagactgaatattggata 14999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 456 - 520
Target Start/End: Complemental strand, 4421 - 4357
Alignment:
Q  456 aaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  4421 aaaagtacaataaggattctagggttaagaatcgtatactagggttttagactgattattagata 4357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 278 - 426
Target Start/End: Complemental strand, 7336 - 7188
Alignment:
Q  278 ttcttcgttcctttacgaagaatcaccccagctgggtcacttgagatatgttccccggaagcatgtttttctttgagagcttcaagatatttcctcctct 377  Q
    |||||||| ||||| ||||| ||||| ||| | ||||| || |  || ||||| ||||| |||||||||||||| ||||||||||| || ||||||||||    
T  7336 ttcttcgtccctttgcgaaggatcacgccaacagggtcgctcgctatgtgttcaccggatgcatgtttttctttaagagcttcaaggtacttcctcctct 7237  T
Q  378 cttttgcagataaaggcaacatcggcactacaaaaaagaaagaataaac 426  Q
    ||||  |||||||||||| ||| ||||||  | || |||||||||||||    
T  7236 ctttcccagataaaggcagcattggcactgtacaatagaaagaataaac 7188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 456 - 515
Target Start/End: Original strand, 2856 - 2915
Alignment:
Q  456 aaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattatt 515  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||| |||||||||||||||    
T  2856 aaaagtacaataagggattctagggttaagaatcgtctattaggg-tttagactgattatt 2915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 4e-21; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 22751898 - 22751834
Alignment:
Q  455 aaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||    
T  22751898 aaaaagtacaataaggattctagggttaagaatcgtatactagggttttagacttattattggat 22751834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 22763176 - 22763112
Alignment:
Q  455 aaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  22763176 aaaaagtacaataaggattctagggttaagaatcgtatactaggattttagactgattattggat 22763112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 444 - 519
Target Start/End: Complemental strand, 10757430 - 10757356
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  10757430 tgtacttgcagaaaaagtacaataaagattctagggttaagaatcgtctattaggg-tttagactgaatattggat 10757356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 444 - 519
Target Start/End: Complemental strand, 10970601 - 10970527
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  10970601 tgtacttgcagaaaaagtacaataaagattctagggttaagaatcgtctattaggg-tttagactgaatattggat 10970527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 441 - 519
Target Start/End: Complemental strand, 10755156 - 10755079
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    ||||||||||||| |||||||||||||| ||||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  10755156 aactgtacttgcaaaaaaagtacaataaagattctagggttaagaatcgtctattaggg-tttagactgaatattggat 10755079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 441 - 519
Target Start/End: Complemental strand, 10968925 - 10968848
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    ||||||||||||| |||||||||||||| ||||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  10968925 aactgtacttgcaaaaaaagtacaataaagattctagggttaagaatcgtctattaggg-tttagactgaatattggat 10968848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 455 - 520
Target Start/End: Complemental strand, 27789229 - 27789163
Alignment:
Q  455 aaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  27789229 aaaaagtacaataagggattctagggttaagaatcgtatactagggttttagactgattattggata 27789163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 443 - 521
Target Start/End: Original strand, 7202731 - 7202808
Alignment:
Q  443 ctgtacttgcagaaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggatat 521  Q
    |||||||||||  ||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  7202731 ctgtacttgca--aaaagcacaataagggattctagggttaagaatcgtatattagggttttagactgactattggatat 7202808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 442 - 519
Target Start/End: Original strand, 28924652 - 28924728
Alignment:
Q  442 actgtacttgcagaaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    ||||||||||||  ||||||||||||||| ||||| |||||| |||||||||| |||||||||||||||||||||||||    
T  28924652 actgtacttgca--aaaagtacaataagggattctggggttaagaatcgtatactagggttttagactgattattggat 28924728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 455 - 519
Target Start/End: Complemental strand, 30953345 - 30953280
Alignment:
Q  455 aaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    |||||||||||||||| |||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  30953345 aaaaagtacaataagggattctagggttaagaatcgtatactagggttttatactgattattggat 30953280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 455 - 520
Target Start/End: Complemental strand, 23882537 - 23882471
Alignment:
Q  455 aaaaagtacaataag-gattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||||| |||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||||    
T  23882537 aaaaagcacaataagagattctagggttaagaatcgtatattagggttttagattgactattggata 23882471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 400
Target Start/End: Original strand, 20501409 - 20501538
Alignment:
Q  271 ttctcttttcttcgttcctttacgaagaatcaccccagctgggtcacttgagatatgttccccggaagcatgtttttctttgagagcttcaagatatttc 370  Q
    |||||||| ||||||||||||||||||||| || ||| | || |||||||  || |||||  |||| |||| ||||||||| || | |||||| || ||     
T  20501409 ttctctttccttcgttcctttacgaagaattactccaaccggatcacttgctatgtgttcttcggaggcatttttttctttaagtgattcaaggtacttt 20501508  T
Q  371 ctcctctcttttgcagataaaggcaacatc 400  Q
    ||||| |||||  |||||||||||||||||    
T  20501509 ctcctttctttcccagataaaggcaacatc 20501538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 501
Target Start/End: Complemental strand, 722924 - 722864
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  ||||||||||||||||| |||||||| | |||||||    
T  722924 aactgtacttgcagaaaaagtacggtaaggattctagggttaagaatcgtagactagggtt 722864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 510
Target Start/End: Complemental strand, 20494767 - 20494698
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataagg-attctagggtt-acgaatcgtatattagggttttagactga 510  Q
    |||||||||||||  ||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||    
T  20494767 aactgtacttgca--aaaagtacaataagggattctagggtttaagaatcgtatattagggttttagactga 20494698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 443 - 501
Target Start/End: Complemental strand, 726496 - 726438
Alignment:
Q  443 ctgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||  ||||||||||||||||| |||||||| | |||||||    
T  726496 ctgtacttgcagaaaaagtacggtaaggattctagggttaagaatcgtagactagggtt 726438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 455 - 520
Target Start/End: Complemental strand, 23878890 - 23878822
Alignment:
Q  455 aaaaagtacaataag-gattctagggttacgaatcgt--atattagggttttagactgattattggata 520  Q
    |||||| |||||||| |||||||| |||| |||||||  |||||||||||||||||||| |||||||||    
T  23878890 aaaaagcacaataagagattctagtgttaagaatcgtgtatattagggttttagactgactattggata 23878822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 501
Target Start/End: Original strand, 29724643 - 29724700
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    ||||||||||||||||||||  ||||||||||||||  | |||||||| |||||||||    
T  29724643 tgtacttgcagaaaaagtacggtaaggattctagggccaagaatcgtagattagggtt 29724700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 510
Target Start/End: Complemental strand, 20503376 - 20503319
Alignment:
Q  455 aaaaagtacaataagg-attctagggtt-acgaatcgtatattagggttttagactga 510  Q
    |||||||||||||||| |||||| |||| |  ||||||||||||||||||||||||||    
T  20503376 aaaaagtacaataagggattctaaggtttaataatcgtatattagggttttagactga 20503319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1505 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1505
Description:

Target: scaffold1505; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 444 - 519
Target Start/End: Original strand, 365 - 439
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| |||||||| |||||||||| ||||||||    
T  365 tgtacttgcagaaaaagtacaataaggattatagggttaagaatcgtctattaggg-tttagactgaatattggat 439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 441 - 520
Target Start/End: Original strand, 12946 - 13025
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||| |||||||||||||||||||||||||||  |||||||||  |||||||||||||| ||| |||||||    
T  12946 aactgtacttgcaaaaaaagtacaataaggattctagggttgagaatcgtatgctagggttttagactaattcttggata 13025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 10407 - 10474
Alignment:
Q  455 aaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggatat 521  Q
    |||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  10407 aaaaagtacaataagggattctagggttaagaatcgtatattaaggttttagactgattattggatat 10474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 441 - 520
Target Start/End: Complemental strand, 25026 - 24948
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataa-ggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    |||||||||||||  ||||||||||||| |||||||||||||| ||| ||||| |||||||||||||||||||||||||||    
T  25026 aactgtacttgca--aaaagtacaataaaggattctagggttaagaaacgtatcttagggttttagactgattattggata 24948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 443 - 521
Target Start/End: Complemental strand, 27683 - 27606
Alignment:
Q  443 ctgtacttgcagaaaaagtacaataa-ggattctagggttacgaatcgtatattagggttttagactgattattggatat 521  Q
    |||||||||||  ||||||||| ||| |||||||||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  27683 ctgtacttgca--aaaagtacagtaaaggattctagggttaagaaacgtatattagggttttagattgattattggatat 27606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 441 - 520
Target Start/End: Original strand, 1452 - 1531
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcg-tatattagggttttagactgattattggata 520  Q
    ||||||||||||| |||| ||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||| ||||    
T  1452 aactgtacttgcacaaaa-gtacaataaggattctagggttaagaatcgttatactagggttttagactgattattagata 1531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 441 - 519
Target Start/End: Complemental strand, 37063 - 36986
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    |||||||||||||  ||||||||||||||| |||||||||||| |||||||||||| ||| |||||||||||||||||||    
T  37063 aactgtacttgca--aaaagtacaataagggattctagggttaagaatcgtatattcgggctttagactgattattggat 36986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 441 - 520
Target Start/End: Complemental strand, 78869 - 78791
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggttttagactgattattggata 520  Q
    ||||||||||||| |||||||||| ||||||||||||||||| |||||||||| |||||||||  |||||||||| ||||    
T  78869 aactgtacttgcacaaaaagtacagtaaggattctagggttaagaatcgtatactagggtttt-tactgattattagata 78791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 455 - 516
Target Start/End: Original strand, 25713 - 25775
Alignment:
Q  455 aaaaagtacaataag-gattctagggttacgaatcgtatattagggttttagactgattattg 516  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  25713 aaaaagtacaataagtgattctagggttaagaatcgtatactagggttttagactgattattg 25775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 441 - 517
Target Start/End: Complemental strand, 2319 - 2244
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataagg-attctagggttacgaatcgtatattagggttttagactgattattgg 517  Q
    |||||||||||||  ||||||||||||||| |||||||||||| ||||||||||||||||||||  ||||| ||||||    
T  2319 aactgtacttgca--aaaagtacaataagggattctagggttaagaatcgtatattagggttttttactgactattgg 2244  T

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Target: scaffold0023 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 456 - 521
Target Start/End: Complemental strand, 150063 - 149997
Alignment:
Q  456 aaaagtacaataaggattctagggttacgaatcgtatattagggt-tttagactgattattggatat 521  Q
    ||||||||||||||||||||| ||||| |||||||||| |||||| ||||||||||||||| |||||    
T  150063 aaaagtacaataaggattctatggttaagaatcgtatactagggtatttagactgattattagatat 149997  T

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Target: scaffold0023; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 441 - 521
Target Start/End: Complemental strand, 146870 - 146790
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattaggg-ttttagactgattattggatat 521  Q
    ||||||||||||| |||| |||||||||||||||||||| ||   |||||||| ||||| |||||||||||||||| |||||    
T  146870 aactgtacttgcataaaa-gtacaataaggattctagggataaatatcgtatactagggtttttagactgattattagatat 146790  T

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Target: scaffold0013 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 519
Target Start/End: Original strand, 135725 - 135801
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataag-gattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    |||||||||||||  |||||||||||| | ||||||||||||| |||||||||||||||||||| || ||||||||||||    
T  135725 aactgtacttgca--aaaagtacaataggtgattctagggttaagaatcgtatattagggtttt-gagtgattattggat 135801  T

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Target: scaffold0013; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 133414 - 133478
Alignment:
Q  455 aaaaagtacaataag-gattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||||||| || ||||||||||||    
T  133414 aaaaagtacaataggtgattctagggttaagaatcgtatattagggtttt-gaatgattattggat 133478  T

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Target: scaffold0013; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 137943 - 138007
Alignment:
Q  455 aaaaagtacaataag-gattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||||||| || ||||||||||||    
T  137943 aaaaagtacaataggtgattctagggttaagaatcgtatattagggtttt-gaatgattattggat 138007  T

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Target: scaffold0010 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 441 - 501
Target Start/End: Complemental strand, 245354 - 245294
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataaggattctagggttacgaatcgtatattagggtt 501  Q
    |||||||||||||||||||||||  ||||||||||||||||| |||||||| | |||||||    
T  245354 aactgtacttgcagaaaaagtacggtaaggattctagggttaagaatcgtagactagggtt 245294  T

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Target: scaffold0438 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 459 - 519
Target Start/End: Original strand, 3849 - 3910
Alignment:
Q  459 agtacaataa-ggattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||||||||  ||||||||    
T  3849 agtacaataaaggattctaaggttaagaatcgtatattagggttttagactgtctattggat 3910  T

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Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 96209 - 96274
Alignment:
Q  455 aaaaagtacaataagga-ttctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    ||||||||||||||| | ||||||||||| |||||||||||||||||||||| |||| ||| ||||    
T  96209 aaaaagtacaataagaaattctagggttaagaatcgtatattagggttttaggctgactatcggat 96274  T

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Target: scaffold0272 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 491
Target Start/End: Complemental strand, 5109 - 5062
Alignment:
Q  444 tgtacttgcagaaaaagtacaataaggattctagggttacgaatcgta 491  Q
    ||||||| ||||||||||||  ||||||||||||||||| ||||||||    
T  5109 tgtacttacagaaaaagtacggtaaggattctagggttaagaatcgta 5062  T

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Target: scaffold0888 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 503
Target Start/End: Complemental strand, 4259 - 4198
Alignment:
Q  441 aactgtacttgcagaaaaagtacaataag-gattctagggttacgaatcgtatattagggtttt 503  Q
    |||||||||||||  |||||||||||| | ||||||||||||| ||||| ||| ||||||||||    
T  4259 aactgtacttgca--aaaagtacaataggtgattctagggttaagaatcttattttagggtttt 4198  T

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Target: scaffold0056 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 444 - 519
Target Start/End: Complemental strand, 19390 - 19315
Alignment:
Q  444 tgtacttgcagaaaaagtacaataa-ggattctagggttacgaatcgtatattagggttttagactgattattggat 519  Q
    ||||||||||||||||||||||||| |||| ||||||||    |||||||  ||||| ||| |||||||||||||||    
T  19390 tgtacttgcagaaaaagtacaataatggatactagggttcaatatcgtattctaggg-tttggactgattattggat 19315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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