View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0122_high_12 (Length: 247)

Name: NF0122_high_12
Description: NF0122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0122_high_12
NF0122_high_12
[»] chr3 (50 HSPs)
chr3 (2-120)||(39935024-39935142)
chr3 (1-101)||(39389062-39389160)
chr3 (1-102)||(22304560-22304659)
chr3 (1-82)||(43346859-43346940)
chr3 (1-81)||(29644970-29645050)
chr3 (23-101)||(50612542-50612618)
chr3 (1-102)||(4823646-4823745)
chr3 (1-93)||(32589704-32589793)
chr3 (8-82)||(33803327-33803401)
chr3 (8-101)||(51886553-51886644)
chr3 (1-82)||(29644649-29644730)
chr3 (1-82)||(35946531-35946612)
chr3 (1-82)||(42342456-42342537)
chr3 (1-81)||(12114630-12114710)
chr3 (18-101)||(37726496-37726577)
chr3 (14-82)||(54017897-54017965)
chr3 (1-82)||(37990707-37990788)
chr3 (1-82)||(37991045-37991126)
chr3 (6-82)||(25755403-25755479)
chr3 (14-82)||(39914261-39914329)
chr3 (1-81)||(42584890-42584970)
chr3 (14-82)||(54018279-54018347)
chr3 (36-102)||(22304237-22304301)
chr3 (1-68)||(41359833-41359900)
chr3 (8-82)||(15772863-15772937)
chr3 (8-82)||(25739500-25739574)
chr3 (16-82)||(33175747-33175813)
chr3 (1-62)||(44160612-44160673)
chr3 (1-82)||(52634685-52634765)
chr3 (1-82)||(53577373-53577454)
chr3 (14-82)||(3135154-3135222)
chr3 (2-82)||(49336756-49336836)
chr3 (2-61)||(45395722-45395781)
chr3 (1-82)||(7767382-7767463)
chr3 (1-82)||(21832411-21832492)
chr3 (17-82)||(31190026-31190091)
chr3 (9-62)||(33362369-33362422)
chr3 (24-82)||(11661544-11661602)
chr3 (192-240)||(39935213-39935258)
chr3 (14-82)||(8327913-8327981)
chr3 (2-82)||(15773201-15773281)
chr3 (1-82)||(22304023-22304097)
chr3 (35-82)||(43346659-43346706)
chr3 (23-82)||(53118064-53118123)
chr3 (1-51)||(1634382-1634432)
chr3 (1-82)||(32462968-32463050)
chr3 (14-102)||(3384347-3384433)
chr3 (14-51)||(32462639-32462676)
chr3 (14-51)||(45901754-45901791)
chr3 (34-82)||(3135562-3135610)
[»] chr1 (52 HSPs)
chr1 (1-99)||(32594784-32594880)
chr1 (1-102)||(44290893-44290992)
chr1 (1-102)||(44290526-44290625)
chr1 (14-102)||(3537228-3537314)
chr1 (2-101)||(3550712-3550809)
chr1 (1-106)||(41759470-41759573)
chr1 (1-82)||(29798208-29798289)
chr1 (1-82)||(34364934-34365015)
chr1 (1-82)||(41184493-41184574)
chr1 (23-82)||(40082416-40082475)
chr1 (8-82)||(41157384-41157458)
chr1 (1-102)||(48588556-48588655)
chr1 (1-82)||(17294586-17294667)
chr1 (1-82)||(34364516-34364597)
chr1 (1-82)||(41142381-41142462)
chr1 (1-81)||(3537667-3537747)
chr1 (1-81)||(3875399-3875479)
chr1 (14-82)||(50052104-50052172)
chr1 (1-82)||(26661590-26661671)
chr1 (14-82)||(22077576-22077644)
chr1 (2-102)||(45494043-45494146)
chr1 (8-62)||(41157020-41157074)
chr1 (16-82)||(45084391-45084457)
chr1 (1-81)||(5528822-5528902)
chr1 (1-57)||(44043840-44043896)
chr1 (15-82)||(14318876-14318943)
chr1 (18-68)||(31767246-31767296)
chr1 (1-82)||(37556120-37556201)
chr1 (13-82)||(66552-66621)
chr1 (18-82)||(9955916-9955981)
chr1 (1-82)||(24132053-24132134)
chr1 (1-66)||(26661966-26662031)
chr1 (30-82)||(34649447-34649499)
chr1 (14-82)||(37850681-37850749)
chr1 (14-82)||(38804436-38804504)
chr1 (1-68)||(39066268-39066335)
chr1 (8-54)||(4956228-4956274)
chr1 (8-54)||(22077185-22077231)
chr1 (32-82)||(50469180-50469230)
chr1 (1-82)||(5320033-5320114)
chr1 (25-82)||(11977289-11977346)
chr1 (1-82)||(24600382-24600463)
chr1 (2-79)||(30630707-30630784)
chr1 (26-82)||(4266875-4266931)
chr1 (23-79)||(5575116-5575172)
chr1 (14-82)||(22077909-22077977)
chr1 (23-82)||(30630912-30630972)
chr1 (14-68)||(66168-66223)
chr1 (14-81)||(21378122-21378189)
chr1 (23-82)||(37555739-37555798)
chr1 (15-76)||(44091909-44091970)
chr1 (2-82)||(44685465-44685546)
[»] chr6 (36 HSPs)
chr6 (1-101)||(3409251-3409349)
chr6 (9-102)||(2378117-2378208)
chr6 (9-102)||(29518911-29519002)
chr6 (9-101)||(29518495-29518585)
chr6 (9-101)||(32741171-32741261)
chr6 (1-101)||(35210196-35210294)
chr6 (1-103)||(3415448-3415548)
chr6 (1-101)||(3058218-3058316)
chr6 (14-101)||(26544041-26544126)
chr6 (8-102)||(3409651-3409743)
chr6 (8-101)||(14748413-14748504)
chr6 (1-82)||(9062417-9062498)
chr6 (1-82)||(2377763-2377844)
chr6 (2-82)||(10911574-10911655)
chr6 (1-82)||(16108072-16108153)
chr6 (1-82)||(32460648-32460729)
chr6 (9-101)||(1127352-1127442)
chr6 (1-82)||(6999864-6999945)
chr6 (1-82)||(16454584-16454665)
chr6 (1-82)||(16454916-16454997)
chr6 (1-100)||(1846741-1846838)
chr6 (14-82)||(2579953-2580021)
chr6 (2-82)||(5958672-5958752)
chr6 (15-82)||(1950267-1950334)
chr6 (1-68)||(10074431-10074498)
chr6 (15-81)||(5832108-5832174)
chr6 (1-54)||(10073684-10073737)
chr6 (1-82)||(10074059-10074140)
chr6 (1-82)||(16107687-16107768)
chr6 (14-82)||(593790-593858)
chr6 (1-82)||(2843563-2843645)
chr6 (1-62)||(2578511-2578572)
chr6 (18-68)||(35210501-35210551)
chr6 (1-82)||(2579560-2579641)
chr6 (14-54)||(14789285-14789325)
chr6 (31-81)||(2579203-2579253)
[»] chr8 (57 HSPs)
chr8 (14-101)||(1014326-1014411)
chr8 (1-102)||(3669678-3669777)
chr8 (1-101)||(20870641-20870741)
chr8 (2-82)||(34835218-34835298)
chr8 (14-101)||(41416252-41416335)
chr8 (1-67)||(45122648-45122714)
chr8 (1-82)||(25561884-25561965)
chr8 (1-82)||(33113435-33113516)
chr8 (1-82)||(45122125-45122206)
chr8 (14-101)||(3670052-3670137)
chr8 (23-82)||(18372789-18372848)
chr8 (1-82)||(3038358-3038439)
chr8 (1-62)||(9483255-9483316)
chr8 (3-102)||(1013941-1014038)
chr8 (1-82)||(9309364-9309445)
chr8 (8-61)||(18372069-18372122)
chr8 (1-102)||(30441072-30441175)
chr8 (1-82)||(40518591-40518672)
chr8 (1-82)||(45121978-45122059)
chr8 (14-82)||(147460-147528)
chr8 (26-82)||(18372349-18372405)
chr8 (14-82)||(30359618-30359686)
chr8 (2-62)||(34835504-34835564)
chr8 (2-62)||(34835770-34835830)
chr8 (14-62)||(40579587-40579635)
chr8 (1-68)||(3037776-3037843)
chr8 (1-79)||(5420663-5420741)
chr8 (8-82)||(9482679-9482753)
chr8 (1-82)||(70342-70423)
chr8 (1-82)||(30359280-30359361)
chr8 (1-82)||(34834885-34834966)
chr8 (1-82)||(43274847-43274928)
chr8 (14-82)||(1513996-1514064)
chr8 (25-81)||(25561736-25561792)
chr8 (8-79)||(18373006-18373077)
chr8 (15-82)||(37544572-37544639)
chr8 (1-55)||(18373238-18373292)
chr8 (8-82)||(41972167-41972241)
chr8 (14-68)||(45121737-45121791)
chr8 (3-68)||(6876932-6876997)
chr8 (1-82)||(8918832-8918913)
chr8 (8-82)||(9308986-9309062)
chr8 (9-62)||(32305506-32305559)
chr8 (14-82)||(9608754-9608822)
chr8 (27-82)||(18380111-18380166)
chr8 (14-68)||(9609108-9609162)
chr8 (40-82)||(18371763-18371805)
chr8 (8-62)||(18372678-18372731)
chr8 (1-82)||(45123015-45123094)
chr8 (42-102)||(6731895-6731953)
chr8 (2-82)||(4154350-4154429)
chr8 (14-82)||(8794120-8794188)
chr8 (1-59)||(40518103-40518161)
chr8 (9-54)||(9507819-9507864)
chr8 (1-82)||(9620744-9620825)
chr8 (42-82)||(6651512-6651552)
chr8 (14-78)||(20130462-20130525)
[»] chr4 (60 HSPs)
chr4 (2-101)||(55933191-55933288)
chr4 (1-102)||(50630821-50630920)
chr4 (1-82)||(52884896-52884977)
chr4 (1-82)||(25483345-25483426)
chr4 (1-101)||(49880152-49880250)
chr4 (1-82)||(54017661-54017742)
chr4 (2-101)||(41370349-41370446)
chr4 (1-68)||(54108936-54109003)
chr4 (1-68)||(54936219-54936286)
chr4 (1-82)||(52884704-52884785)
chr4 (2-82)||(3244518-3244598)
chr4 (14-82)||(39404407-39404475)
chr4 (1-96)||(50002423-50002516)
chr4 (1-68)||(45496828-45496895)
chr4 (16-82)||(2741080-2741146)
chr4 (1-79)||(22028027-22028105)
chr4 (23-81)||(54343089-54343147)
chr4 (1-79)||(54741244-54741322)
chr4 (1-82)||(1731713-1731794)
chr4 (1-82)||(4955383-4955464)
chr4 (1-82)||(36608727-36608808)
chr4 (1-82)||(39792926-39793007)
chr4 (1-82)||(41707530-41707611)
chr4 (1-69)||(18932815-18932883)
chr4 (2-82)||(49076515-49076595)
chr4 (1-68)||(44621025-44621092)
chr4 (1-68)||(54017768-54017835)
chr4 (1-82)||(3340816-3340897)
chr4 (23-68)||(4390189-4390234)
chr4 (1-82)||(6975522-6975603)
chr4 (1-82)||(34646715-34646796)
chr4 (1-82)||(36629246-36629327)
chr4 (14-82)||(43174515-43174584)
chr4 (25-82)||(44620305-44620362)
chr4 (14-82)||(2740709-2740777)
chr4 (14-82)||(10245929-10245996)
chr4 (14-82)||(20826226-20826294)
chr4 (2-79)||(22028436-22028515)
chr4 (14-82)||(44620669-44620737)
chr4 (1-82)||(49302913-49302996)
chr4 (23-82)||(3700374-3700433)
chr4 (3-82)||(16888884-16888963)
chr4 (1-84)||(44620360-44620443)
chr4 (15-62)||(54108565-54108612)
chr4 (17-82)||(11348410-11348475)
chr4 (1-82)||(32941189-32941270)
chr4 (9-82)||(34004658-34004730)
chr4 (1-82)||(36572028-36572109)
chr4 (1-82)||(50459730-50459811)
chr4 (1-82)||(51768126-51768207)
chr4 (14-82)||(20825845-20825913)
chr4 (14-82)||(39404027-39404095)
chr4 (39-101)||(50788087-50788147)
chr4 (16-82)||(3341137-3341203)
chr4 (14-80)||(10246358-10246424)
chr4 (25-79)||(45489421-45489475)
chr4 (25-82)||(44621435-44621492)
chr4 (14-82)||(16889615-16889683)
chr4 (25-68)||(44620968-44621011)
chr4 (14-60)||(49076910-49076955)
[»] chr5 (46 HSPs)
chr5 (1-103)||(9498722-9498822)
chr5 (1-82)||(18603188-18603269)
chr5 (1-101)||(32487386-32487483)
chr5 (1-102)||(6500814-6500912)
chr5 (1-101)||(6500443-6500540)
chr5 (1-82)||(11417045-11417126)
chr5 (1-101)||(27502104-27502202)
chr5 (1-82)||(41170643-41170724)
chr5 (9-96)||(36492293-36492378)
chr5 (1-79)||(26075230-26075308)
chr5 (8-82)||(40296390-40296464)
chr5 (14-82)||(13415841-13415909)
chr5 (14-82)||(25327944-25328012)
chr5 (8-93)||(3295090-3295172)
chr5 (1-68)||(3295412-3295479)
chr5 (16-106)||(7768837-7768925)
chr5 (1-82)||(299498-299579)
chr5 (14-102)||(624187-624273)
chr5 (1-82)||(6224205-6224286)
chr5 (1-82)||(26074214-26074295)
chr5 (1-82)||(26074621-26074702)
chr5 (9-96)||(29549331-29549416)
chr5 (15-82)||(15370108-15370175)
chr5 (14-81)||(41632792-41632859)
chr5 (1-79)||(33747783-33747861)
chr5 (1-82)||(12662720-12662801)
chr5 (1-82)||(26074850-26074931)
chr5 (1-82)||(35150016-35150096)
chr5 (2-67)||(41635260-41635325)
chr5 (14-101)||(623810-623895)
chr5 (14-82)||(26074327-26074395)
chr5 (14-82)||(42405677-42405745)
chr5 (25-80)||(300970-301025)
chr5 (1-101)||(5723859-5723957)
chr5 (15-68)||(35167920-35167973)
chr5 (14-82)||(1028598-1028666)
chr5 (26-82)||(35914858-35914914)
chr5 (15-54)||(26590992-26591031)
chr5 (1-54)||(15370439-15370492)
chr5 (1-82)||(36568635-36568716)
chr5 (1-81)||(34753093-34753173)
chr5 (31-82)||(6225053-6225104)
chr5 (1-82)||(24489274-24489353)
chr5 (1-87)||(38427552-38427637)
chr5 (1-77)||(19275543-19275618)
chr5 (14-82)||(39309693-39309760)
[»] chr7 (45 HSPs)
chr7 (1-102)||(14681501-14681600)
chr7 (1-102)||(37533078-37533177)
chr7 (1-81)||(6054570-6054650)
chr7 (1-82)||(1085684-1085765)
chr7 (1-82)||(7517589-7517670)
chr7 (1-82)||(7554034-7554115)
chr7 (1-99)||(29157559-29157655)
chr7 (1-82)||(11845200-11845281)
chr7 (1-82)||(22566730-22566811)
chr7 (1-68)||(22567107-22567174)
chr7 (14-81)||(45434646-45434713)
chr7 (24-82)||(30245503-30245561)
chr7 (1-82)||(23445-23526)
chr7 (1-82)||(16569205-16569286)
chr7 (1-82)||(16596376-16596457)
chr7 (1-82)||(19122741-19122821)
chr7 (1-82)||(30244279-30244360)
chr7 (1-82)||(30245086-30245167)
chr7 (1-82)||(34218102-34218183)
chr7 (1-82)||(37533432-37533513)
chr7 (1-82)||(40094842-40094923)
chr7 (9-81)||(118377-118449)
chr7 (2-82)||(24177444-24177524)
chr7 (14-82)||(47129104-47129172)
chr7 (1-81)||(24838769-24838850)
chr7 (1-82)||(36939801-36939882)
chr7 (1-82)||(41910662-41910743)
chr7 (24-80)||(30255350-30255406)
chr7 (1-81)||(40230359-40230439)
chr7 (3-82)||(28301613-28301692)
chr7 (23-82)||(36109007-36109066)
chr7 (1-82)||(9901654-9901733)
chr7 (14-79)||(36534865-36534930)
chr7 (1-82)||(36622969-36623050)
chr7 (1-82)||(45754725-45754805)
chr7 (23-82)||(30244710-30244769)
chr7 (25-68)||(45433264-45433307)
chr7 (1-62)||(1085316-1085377)
chr7 (14-87)||(30032571-30032644)
chr7 (1-82)||(43241504-43241585)
chr7 (14-82)||(8128522-8128590)
chr7 (26-82)||(41854644-41854699)
chr7 (41-82)||(40094502-40094543)
chr7 (1-49)||(30253534-30253582)
chr7 (14-78)||(44361545-44361608)
[»] chr2 (44 HSPs)
chr2 (1-102)||(5543066-5543165)
chr2 (1-102)||(36178673-36178772)
chr2 (9-102)||(37106179-37106270)
chr2 (1-101)||(14745735-14745833)
chr2 (1-101)||(41283543-41283641)
chr2 (16-102)||(7598600-7598684)
chr2 (1-102)||(5542693-5542792)
chr2 (1-106)||(37105911-37106014)
chr2 (1-82)||(15511563-15511644)
chr2 (1-101)||(36178337-36178435)
chr2 (1-82)||(42514658-42514739)
chr2 (1-82)||(962607-962688)
chr2 (1-82)||(15880272-15880353)
chr2 (14-101)||(1769884-1769969)
chr2 (14-82)||(40733526-40733594)
chr2 (3-82)||(31899496-31899575)
chr2 (8-82)||(6421394-6421468)
chr2 (1-91)||(33731648-33731738)
chr2 (14-82)||(6712985-6713053)
chr2 (2-82)||(12529097-12529177)
chr2 (14-82)||(38796701-38796769)
chr2 (1-68)||(36178239-36178306)
chr2 (1-102)||(14745362-14745461)
chr2 (1-79)||(28254305-28254383)
chr2 (1-82)||(16542458-16542539)
chr2 (1-82)||(28531382-28531463)
chr2 (14-82)||(37632678-37632746)
chr2 (14-82)||(38796299-38796367)
chr2 (1-68)||(6422133-6422200)
chr2 (1-82)||(35580792-35580872)
chr2 (1-54)||(36005948-36006001)
chr2 (34-82)||(36785664-36785712)
chr2 (2-68)||(28254181-28254247)
chr2 (26-80)||(40163466-40163520)
chr2 (14-67)||(31259697-31259750)
chr2 (1-82)||(33561519-33561600)
chr2 (1-82)||(40679697-40679778)
chr2 (10-62)||(5367484-5367536)
chr2 (1-82)||(31468818-31468895)
chr2 (23-82)||(29676912-29676971)
chr2 (1-79)||(7598240-7598318)
chr2 (8-82)||(29676544-29676618)
chr2 (24-82)||(40733892-40733950)
chr2 (18-82)||(9231258-9231322)
[»] scaffold0734 (2 HSPs)
scaffold0734 (2-82)||(5405-5485)
scaffold0734 (1-82)||(5786-5867)
[»] scaffold0702 (2 HSPs)
scaffold0702 (14-102)||(224-309)
scaffold0702 (1-82)||(582-663)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-82)||(17524-17605)
[»] scaffold0504 (1 HSPs)
scaffold0504 (13-82)||(10191-10260)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-82)||(5366-5447)
[»] scaffold0027 (1 HSPs)
scaffold0027 (2-68)||(47383-47449)
[»] scaffold0391 (1 HSPs)
scaffold0391 (1-82)||(1174-1255)


Alignment Details
Target: chr3 (Bit Score: 95; Significance: 1e-46; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 39935024 - 39935142
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 101  Q
    ||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||    
T  39935024 ttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactcttttatccgatgtaggacatataactctcacacttgcaaaccaaca 39935123  T
Q  102 caaatccataaccacgtcc 120  Q
    |||||||||||||||||||    
T  39935124 caaatccataaccacgtcc 39935142  T

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Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 39389160 - 39389062
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||||||||| |||||||| |||||||| || |||||||||||||||||||||||||||| |||||| |||||||||  |||||||||||||||||||    
T  39389160 cttaagacaatgggtttatgggtcctcttagttttaaggtgttcaacctttactattttatccgatgtaggacatataa--ctcacacttgcaaaccaac 39389063  T

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Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 22304659 - 22304560
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||   |||||||||||||||||||    
T  22304659 cttaaggcaatgtgtttatgggtcctcttacttataaggtattcaacctttactattttatccgatgtgggacatata--gctcacacttgcaaaccaac 22304562  T

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Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 43346859 - 43346940
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  43346859 cttaaggcaatgagtttatgggttctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactc 43346940  T

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Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 29644970 - 29645050
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 81  Q
    |||||||||||| |||||||| ||||||||||||||||||||| |||||||||| ||||||| |||||  |||||||||||    
T  29644970 cttaagacaatgggtttatgggtcctcttacttataaggtgtttaacctttactcttttatccgatgtgggacatataact 29645050  T

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Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 50612542 - 50612618
Alignment:
Q  23 tcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 101  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||  |||||||||  ||||||||||||||||||||    
T  50612542 tcctcttacttataaggtgttcaatctttactattttatccgatgtgggacatataa--ctcacacttgcaaaccaaca 50612618  T

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Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 4823745 - 4823646
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||| |||||||| ||||| ||||||||||||||| ||| |||||||||||||| |||||  ||| |||||  |||||||||||||||||||    
T  4823745 cttaaggcaatgagtttatgggtcctcctacttataaggtgtttaacttttactattttatccgatgtgagacttataa--ctcacacttgcaaaccaac 4823648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 32589793 - 32589704
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgca 93  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||| |||||||||| ||||  ||||||||   ||||||||||||    
T  32589793 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttattattttatcttatgtgggacatata---ctcacacttgca 32589704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 33803327 - 33803401
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| |||||  ||||||||||||    
T  33803327 caatgggtttatgggtcctcttacttatatggtgttcaacctttactattttatccgatgtgggacatataactc 33803401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 51886644 - 51886553
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 101  Q
    ||||| |||||||| |||||||||||||| | ||||||||||||||||||||||  |||||  |||||||||  ||||||||||||||||||||    
T  51886644 caatgagtttatgggtcctcttacttatatgatgttcaacctttactattttattcgatgtgagacatataa--ctcacacttgcaaaccaaca 51886553  T

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Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 29644649 - 29644730
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||| |||||||| | |||||||||||||||||||||||||||||| ||| ||| |||||  ||||||||||||    
T  29644649 cttaagacaatgggtttatgggttctcttacttataaggtgttcaacctttactctttaatccgatgtgggacatataactc 29644730  T

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Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 35946612 - 35946531
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||| | |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  35946612 cttaaggcaacgggtttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactc 35946531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 42342456 - 42342537
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||||||  ||||||| ||||||||||||||||||||| |||||||||| ||||||| |||||  ||||||||||||    
T  42342456 cttaagacaatggatttatgggtcctcttacttataaggtgttgaacctttactcttttatcggatgtgggacatataactc 42342537  T

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Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 12114630 - 12114710
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 81  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||| || |||| |||||  || ||||||||    
T  12114630 cttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgggatatataact 12114710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 37726577 - 37726496
Alignment:
Q  18 atggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 101  Q
    |||| |||||||||||||||||| |||||| |||||||||||||| |||||  |||||||||  ||||||||||||||||||||    
T  37726577 atggatcctcttacttataaggtattcaacatttactattttatccgatgtgagacatataa--ctcacacttgcaaaccaaca 37726496  T

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Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 54017897 - 54017965
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  54017897 gtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtaggacatataactc 54017965  T

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Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 37990707 - 37990788
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||  ||||||||||||||||||||||||| |||||||||||||| |||||   |||||||||||    
T  37990707 cttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactc 37990788  T

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Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 37991045 - 37991126
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| | ||| |||||| | ||||||||||||||||||||||||||||||||||||||||  ||||  ||||||||||||    
T  37991045 cttaaggcgatgagtttataggtcctcttacttataaggtgttcaacctttactattttatccaatgtgagacatataactc 37991126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 25755479 - 25755403
Alignment:
Q  6 gacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||  ||||||  |||||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||    
T  25755479 gacaatggatttatgagtcctcttacttataaggtattcaacctttactcttttatctgatgtgagacatataactc 25755403  T

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Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 39914329 - 39914261
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| |||||||| |||||||||||||||||| |||| |||||||||||||  ||||||||||||    
T  39914329 gtttatgggtcctcttatttataaggtgttcaacctctactgttttatctgatgtgagacatataactc 39914261  T

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Target: chr3; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 42584890 - 42584970
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 81  Q
    |||||||||||  |||||||| |||||||||||||||||||||||| ||||||| || |||| |||||  |||||||||||    
T  42584890 cttaagacaattggtttatggatcctcttacttataaggtgttcaatctttactcttctatccgatgtgggacatataact 42584970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 54018279 - 54018347
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| |||||||||||||||||||||||| ||||||| ||||||| |||| | ||||||||||||    
T  54018279 gtttatgggtcctcttacttataaggtgttcaatctttactcttttatccgatgcaggacatataactc 54018347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 22304301 - 22304237
Alignment:
Q  36 aaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 102  Q
    ||||||||||||||||||||||||||| |||||  |||||||||  |||||||||||||||||||||    
T  22304301 aaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaaccaacac 22304237  T

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Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 41359833 - 41359900
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||||| ||||| |||||||| |||||||||||||||||| |||||||||||||||| |||| |||||    
T  41359833 cttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactattgtatccgatgt 41359900  T

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Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 15772937 - 15772863
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||| |||||||| ||||||||||||||||||||||||| |||||| ||||||| ||| |  ||||||||||||    
T  15772937 caatgagtttatgggtcctcttacttataaggtgttcaacatttactcttttatccgatatgggacatataactc 15772863  T

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Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 25739500 - 25739574
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||| |||||||| |||||||||||||| | |||||||| |||||||||||||| |||||  ||||||||||||    
T  25739500 caatgagtttatgggtcctcttacttatatgatgttcaacttttactattttatccgatgtgggacatataactc 25739574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 33175747 - 33175813
Alignment:
Q  16 ttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| | |||||||||||||||||||||||||||||| || ||||||||||  ||||||||||||    
T  33175747 ttatgggttctcttacttataaggtgttcaacctttacttttctatctgatgtgagacatataactc 33175813  T

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Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44160612 - 44160673
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatc 62  Q
    |||||||||||| |||||||| |||||||| ||||||||||||||||||||| | |||||||    
T  44160612 cttaagacaatgggtttatggatcctcttatttataaggtgttcaacctttattgttttatc 44160673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 52634765 - 52634685
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| || |||||||||||||| |||||||||||||| ||||||| |||||  ||||||||||||    
T  52634765 cttaaggcaatgggtttatgggtc-tcttacttataaggcgttcaacctttactgttttatccgatgtgggacatataactc 52634685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 53577454 - 53577373
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| |||| ||||||||| ||| |||| || |||| ||||||||||||||| ||||||| ||||| |||||||||||||    
T  53577454 cttaaggcaatatgtttatggatccacttatttttaagatgttcaacctttactgttttatccgatgtgtgacatataactc 53577373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 3135154 - 3135222
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| | || |||||||||||||||||||| |||||||||||||| |||||  ||||||||||||    
T  3135154 gtttatgggttcttttacttataaggtgttcaacatttactattttatccgatgtgggacatataactc 3135222  T

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Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 49336756 - 49336836
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||| ||| |||||||| ||||||||||||||||||| |||||||||||| || |||| |||||  ||||| ||||||    
T  49336756 ttaagactatgggtttatgggtcctcttacttataaggtggtcaacctttacttttctatccgatgtgagacatgtaactc 49336836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 45395722 - 45395781
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttat 61  Q
    ||||||||||| |||||||| ||||||||||||||| ||||| |||||||||| ||||||    
T  45395722 ttaagacaatgggtttatggatcctcttacttataacgtgtttaacctttactcttttat 45395781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7767382 - 7767463
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||| |||||||  |||||||| |||||| |||| ||||||||||| || |||| |||||  ||||||||||||    
T  7767382 cttaagacaatgggtttatgagtcctcttagttataaagtgtccaacctttacttttctatccgatgtgggacatataactc 7767463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 21832411 - 21832492
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| | ||| |||||||  |||||||||||||||||||||||||||||||| || ||||  ||||  ||||||||||||    
T  21832411 cttaaggctatgagtttatgagtcctcttacttataaggtgttcaacctttacttttctatccaatgtgggacatataactc 21832492  T

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Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 31190091 - 31190026
Alignment:
Q  17 tatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||| |||||| ||||||||||||||||||||||||| ||||||| |||||  ||||||| ||||    
T  31190091 tatgggtcctctaacttataaggtgttcaacctttactcttttatccgatgtgggacatatcactc 31190026  T

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Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 33362369 - 33362422
Alignment:
Q  9 aatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatc 62  Q
    |||| |||||||| |||||||||||||||||| ||||||||||| |||||||||    
T  33362369 aatgggtttatgggtcctcttacttataaggtattcaacctttattattttatc 33362422  T

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Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 11661602 - 11661544
Alignment:
Q  24 cctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||||||||| |||| |||| ||||||||||||| |||||  ||||||||||||    
T  11661602 cctcttacttataagatgtttaaccgttactattttatccgatgtgggacatataactc 11661544  T

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Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 39935213 - 39935258
Alignment:
Q  192 ctgaatcatatcttcccctctctcattaataaagttgcgagaataatct 240  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  39935213 ctgaatcatatcttcccctctctcat---taaagttgcgagaataatct 39935258  T

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Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 8327981 - 8327913
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| | |||||||||||||| | |||| |||||||| ||||||| |||||  ||||||||||||    
T  8327981 gtttatgggttctcttacttataagatattcatcctttactcttttatccgatgtgggacatataactc 8327913  T

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Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 15773281 - 15773201
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||| ||||| | |||||  |||||||||||||||| |||||||| |||||| ||||||  |||||  ||||||||||||    
T  15773281 ttaaggcaatgagcttatgagtcctcttacttataagatgttcaacttttactcttttattcgatgtgggacatataactc 15773201  T

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Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 22304023 - 22304097
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| ||| ||||||||||||       |||||||||||||||||||||||  ||||||||||||    
T  22304023 cttaaggcaatgggtttatgggtccgcttacttataag-------acctttactattttatctgatgtgggacatataactc 22304097  T

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Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 43346706 - 43346659
Alignment:
Q  35 taaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||||||||||||||||||| |||||  |||||| |||||    
T  43346706 taaggtgttcaacctttactattttatccgatgtgggacatacaactc 43346659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 53118064 - 53118123
Alignment:
Q  23 tcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||||||||||||||||||||||| ||||||| ||| |   |||||||||||    
T  53118064 tcctctcacttataaggtgttcaacctttactcttttatccgatatggaacatataactc 53118123  T

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Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1634382 - 1634432
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaaccttt 51  Q
    |||||| ||||| |||||||| ||||||||||||||| ||||| |||||||    
T  1634382 cttaagccaatgggtttatgggtcctcttacttataatgtgtttaaccttt 1634432  T

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Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 32462968 - 32463050
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacc-tttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||  || ||||||||||||||| ||||||| |||||| || |||| |||||  ||||||||||||    
T  32462968 cttaaggcaatgggtttatgagtcttcttacttataaggtattcaaccttttactcttctatccgatgtgggacatataactc 32463050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 3384347 - 3384433
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 102  Q
    |||||||| ||||||| ||||||| ||||| ||||| |||| |||||||  ||||  |||||||||  ||||| |||||| ||||||||    
T  3384347 gtttatgggtcctcttccttataaagtgtttaacctatactgttttatcatatgtgggacatataa--ctcacgcttgcacaccaacac 3384433  T

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Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 32462639 - 32462676
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaaccttt 51  Q
    |||||||| || ||||||||||||||||||||||||||    
T  32462639 gtttatggatcatcttacttataaggtgttcaaccttt 32462676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 45901791 - 45901754
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaaccttt 51  Q
    |||||||  |||||||||||||||||||||||||||||    
T  45901791 gtttatgcgtcctcttacttataaggtgttcaaccttt 45901754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 3135562 - 3135610
Alignment:
Q  34 ataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||||| |||||| |||||||||| ||  ||||||||||||    
T  3135562 ataaggtgttcaacttttactcttttatctgaggtgggacatataactc 3135610  T

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Target: chr1 (Bit Score: 76; Significance: 3e-35; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 32594784 - 32594880
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaa 99  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||    
T  32594784 cttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtaggacatataa--ctcacacttgcaaaccaa 32594880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 44290893 - 44290992
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  |||||||||||||||||||    
T  44290893 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaaccaac 44290990  T

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Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 44290526 - 44290625
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||| |||||||| |||||||||||||||| ||||||||||||||||||||||| |||||  |||||||||  |||||||||||||||||||    
T  44290526 cttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaaccaac 44290623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 3537228 - 3537314
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 102  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  |||||||||||||||||||||    
T  3537228 gtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaaccaacac 3537314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 3550809 - 3550712
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 101  Q
    ||||| ||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||  ||||||||||| ||||||||    
T  3550809 ttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataa--ctcacacttgccaaccaaca 3550712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 41759573 - 41759470
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| |||||  ||||||| || |||||||||||||||||||||| |||||||||||||| ||||| ||||||||||  |||||||||||||||||||    
T  41759573 cttaaggcaatggatttatggatcatcttacttataaggtgttcaacttttactattttatccgatgtgtgacatataa--ctcacacttgcaaaccaac 41759476  T
Q  101 acaaat 106  Q
    | ||||    
T  41759475 aaaaat 41759470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 29798289 - 29798208
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||  ||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  29798289 cttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatccaatgtaggacatataactc 29798208  T

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Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 34365015 - 34364934
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| | ||| |||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  34365015 cttaaggctatgggtttatgggtcctcttacttataaggtgttcaacctttattattttatccgatgtgtgacatataactc 34364934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 41184493 - 41184574
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||  ||||||||||||    
T  41184493 cttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgagacatataactc 41184574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 40082475 - 40082416
Alignment:
Q  23 tcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  40082475 tcctcttacttataaggtgttcaacctttactattttatccgatgtaggacatataactc 40082416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 41157458 - 41157384
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||| |||||||| ||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||    
T  41157458 caatgggtttatgggtcctcttacttataaggtgttcaacttttactcttttatctgatgtgggacatataactc 41157384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 48588556 - 48588655
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| |||||  |||| || || ||||||||||||||||||||||||||||||||||||| |||||  |||||| ||  |||||||||||||||||||    
T  48588556 cttaaggcaatgaatttacgggtcttcttacttataaggtgttcaacctttactattttatccgatgtcggacatagaa--ctcacacttgcaaaccaac 48588653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 17294667 - 17294586
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||| |||||  ||||||||||||    
T  17294667 cttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatccgatgtgggacatataactc 17294586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 34364597 - 34364516
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| | ||| ||||| || |||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  34364597 cttaaggctatgggtttacggatcctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactc 34364516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 41142462 - 41142381
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||| ||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  41142462 cttaaggcaatgggtttatgggtccttttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactc 41142381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3537667 - 3537747
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 81  Q
    |||||| ||||| |||||| | |||||||||| ||||||||||||||||||||||||||||| |||||  |||||||||||    
T  3537667 cttaagccaatgggtttataggtcctcttactcataaggtgttcaacctttactattttatccgatgtgggacatataact 3537747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3875399 - 3875479
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 81  Q
    |||||| ||||| |||||||  |||||||||||||||||||| ||||||||||| ||||||| ||||| ||||||||||||    
T  3875399 cttaaggcaatgggtttatgagtcctcttacttataaggtgtacaacctttacttttttatccgatgtgtgacatataact 3875479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 50052104 - 50052172
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||    
T  50052104 gtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactc 50052172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 26661590 - 26661671
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||||| ||||||||||||||||||||||||| ||||| | |||||  ||||||||||||    
T  26661590 cttaaggcaatgagtttatgggtcctctcacttataaggtgttcaacctttactcttttacccgatgtgggacatataactc 26661671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 22077576 - 22077644
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| |||||||||||||||||||||||||||||||| || |||| |||||  ||||||||||||    
T  22077576 gtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataactc 22077644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 45494043 - 45494146
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataa----ggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaacc 97  Q
    ||||| ||||| |||||||| || |||||||||||     ||||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||||    
T  45494043 ttaaggcaatgggtttatggatcatcttacttatatatatggtgttcaacctttactattttatccgatgtgggacatataa-actcacacttgcaaacc 45494141  T
Q  98 aacac 102  Q
    |||||    
T  45494142 aacac 45494146  T

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Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 41157074 - 41157020
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatc 62  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  41157074 caatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatc 41157020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 45084457 - 45084391
Alignment:
Q  16 ttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||| |||||  || |||||||||    
T  45084457 ttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggagatataactc 45084391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 5528822 - 5528902
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 81  Q
    ||||||| |||| |||||||  |||||||| ||||||| ||||||||||||||| ||||||| |||||  |||||||||||    
T  5528822 cttaagaaaatgagtttatgagtcctcttatttataagatgttcaacctttactcttttatccgatgtgagacatataact 5528902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 44043840 - 44043896
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactatt 57  Q
    |||||||||||| |||||||| || |||||||||||||||||||||| |||||||||    
T  44043840 cttaagacaatgggtttatgggtcatcttacttataaggtgttcaacatttactatt 44043896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 14318943 - 14318876
Alignment:
Q  15 tttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||| || ||   |||||||||||    
T  14318943 tttatgggtcttcttacttataaggtgttcaacctttactattttatccgacgtggaacatataactc 14318876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 31767246 - 31767296
Alignment:
Q  18 atggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||| |||||||||||||||||||||||||||||||| ||||||| |||||    
T  31767246 atgggtcctcttacttataaggtgttcaacctttactgttttatccgatgt 31767296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 37556201 - 37556120
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttacta-ttttatctgatgtatgacatataactc 82  Q
    |||||| | ||| ||||||||| ||||||||||||||| |||||||||||||||| ||||||| |||||  ||||||||||||    
T  37556201 cttaaggctatgggtttatggt-cctcttacttataagatgttcaacctttactatttttatccgatgtgggacatataactc 37556120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 66552 - 66621
Alignment:
Q  13 tgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||| |||||||||||||||||||||||||||||||| || |||| ||| |   |||||||||||    
T  66552 tgtttatggatcctcttacttataaggtgttcaacctttacttttctatccgatatggaacatataactc 66621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 9955981 - 9955916
Alignment:
Q  18 atggttcctcttacttataaggtgttcaacctttac-tattttatctgatgtatgacatataactc 82  Q
    |||| ||||||||||||||| ||||||||||||||| | |||||||||||||  ||||||||||||    
T  9955981 atgggtcctcttacttataatgtgttcaacctttactttttttatctgatgtgggacatataactc 9955916  T

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Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 24132053 - 24132134
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| ||| |||| ||||||||||||||||||||||| || |||| ||||   ||||||||||||    
T  24132053 cttaaggcaatgagtttatggatccccttatttataaggtgttcaacctttacttttctatccgatgagggacatataactc 24132134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26661966 - 26662031
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgat 66  Q
    |||||| ||||  |||||||| || ||| ||||||||||||||||||||||||| |||||||||||    
T  26661966 cttaaggcaatcggtttatgggtcttctcacttataaggtgttcaacctttactcttttatctgat 26662031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 34649499 - 34649447
Alignment:
Q  30 acttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  34649499 acttataaggtgttcaacctttactcttttatccgatgtgggacatataactc 34649447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 37850681 - 37850749
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| | ||||||||||||||||||||||||| |||| ||||||  |||||  ||||||||||||    
T  37850681 gtttatgggttctcttacttataaggtgttcaacctctactgttttatgcgatgtgggacatataactc 37850749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 38804436 - 38804504
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| ||||||||||||||| |||||||||||||||| ||||||  |||||  ||| ||||||||    
T  38804436 gtttatggatcctcttacttataatgtgttcaacctttactcttttattcgatgtgggacgtataactc 38804504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 39066268 - 39066335
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    ||||||||||||  ||||||| || ||||| ||||||||||||||||||||||| || |||| |||||    
T  39066268 cttaagacaatgattttatgggtcatcttagttataaggtgttcaacctttacttttctatccgatgt 39066335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 4956274 - 4956228
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttact 54  Q
    ||||| |||||||| |||||||||||||||| |||||||||||||||    
T  4956274 caatgagtttatggatcctcttacttataagatgttcaacctttact 4956228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 22077185 - 22077231
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttact 54  Q
    ||||| |||||||| |||||||||||||||||| |||||||||||||    
T  22077185 caatgagtttatgggtcctcttacttataaggtattcaacctttact 22077231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 50469180 - 50469230
Alignment:
Q  32 ttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| |||||||||||||||| | |||||||||||| ||||||||||||    
T  50469180 ttataaagtgttcaacctttactttattatctgatgtaggacatataactc 50469230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 5320033 - 5320114
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| | ||| |||||||| |||||| |||||||||||||||||| |||||| || |||| |||||   |||||||||||    
T  5320033 cttaaggctatgagtttatgggtcctctcacttataaggtgttcaacttttacttttctatccgatgtggaacatataactc 5320114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 11977346 - 11977289
Alignment:
Q  25 ctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||||||||||||||||| |||||| ||||| | |||||  ||||||||||||    
T  11977346 ctcttacttataaggtgttcaacatttactgttttacccgatgtgggacatataactc 11977289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 24600382 - 24600463
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||| |||||||  | |||||||||||||  ||||||||||||||| || |||| ||| |  ||||||||||||    
T  24600382 cttaagacaatgagtttatgagttctcttacttataatatgttcaacctttacttttctatccgatatgggacatataactc 24600463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 30630707 - 30630784
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 79  Q
    ||||| |||||||||||||| | ||||||||||||| ||||  |||||||| | ||||||| |||||  |||||||||    
T  30630707 ttaaggcaatgtgtttatgggttctcttacttataaagtgtcaaacctttaattttttatccgatgtgagacatataa 30630784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 4266875 - 4266931
Alignment:
Q  26 tcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| ||| ||||||||| |||||| |||||||| ||||| ||||||||||||    
T  4266875 tcttacttctaatgtgttcaacatttactcttttatctaatgtaggacatataactc 4266931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 5575172 - 5575116
Alignment:
Q  23 tcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 79  Q
    |||||||||||||||||||||||||||||||| || |||| || ||  |||||||||    
T  5575172 tcctcttacttataaggtgttcaacctttactcttctatccgacgtgggacatataa 5575116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 22077909 - 22077977
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| |||||||||||||||| ||||||||||||| | || |||| ||| ||  |||||||||||    
T  22077909 gtttatgggtcctcttacttataagatgttcaacctttatttttctatccgatttaaaacatataactc 22077977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 30630912 - 30630972
Alignment:
Q  23 tcctcttacttataaggtgttcaaccttt-actattttatctgatgtatgacatataactc 82  Q
    ||||||||||||||||||||||| ||||| | | ||||||| |||||| ||||||||||||    
T  30630912 tcctcttacttataaggtgttcagcctttaatttttttatccgatgtaagacatataactc 30630972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 66168 - 66223
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttc-aacctttactattttatctgatgt 68  Q
    |||||||| |||||||||||||||||||||| |||||||||| || |||| |||||    
T  66168 gtttatgggtcctcttacttataaggtgttcaaacctttacttttctatccgatgt 66223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 21378122 - 21378189
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 81  Q
    |||||||| |||||||||||||||| | ||||||||||||| || |||| ||| |  |||||||||||    
T  21378122 gtttatgggtcctcttacttataagatattcaacctttactgttctatccgatctgggacatataact 21378189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 37555798 - 37555739
Alignment:
Q  23 tcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||||||||| || ||||||||| ||||||||||| |||||  ||| ||||||||    
T  37555798 tcctcttacttataatgtattcaaccttcactattttatccgatgtgggacttataactc 37555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 44091970 - 44091909
Alignment:
Q  15 tttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacata 76  Q
    ||||||| | |||| |||||||| |||||||||||||||| ||  ||||||||| |||||||    
T  44091970 tttatgggttctctcacttataaagtgttcaacctttacttttacatctgatgtgtgacata 44091909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 44685546 - 44685465
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttc-aacctttactattttatctgatgtatgacatataactc 82  Q
    ||||| ||||| |||||| | |||||||||||||||||| ||| |||||||||| || |||| ||| |  ||||||||||||    
T  44685546 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactc 44685465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3409349 - 3409251
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||  |||||||||||||||||||    
T  3409349 cttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataa--ctcacacttgcaaaccaac 3409252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 2378208 - 2378117
Alignment:
Q  9 aatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 102  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  |||||||||||||||||||||    
T  2378208 aatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaaccaacac 2378117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 29519002 - 29518911
Alignment:
Q  9 aatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 102  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  |||||||||||||||||||||    
T  29519002 aatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaaccaacac 29518911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 29518585 - 29518495
Alignment:
Q  9 aatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 101  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||||||||    
T  29518585 aatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaaccaaca 29518495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 32741261 - 32741171
Alignment:
Q  9 aatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 101  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||||||||    
T  32741261 aatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaaccaaca 32741171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 35210294 - 35210196
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| |||||  ||||||| |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  |||||||||||||||||||    
T  35210294 cttaaggcaatggttttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataa--ctcacacttgcaaaccaac 35210197  T

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Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 3415548 - 3415448
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||| |||||||| |||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||  |||||||| ||||||||||    
T  3415548 cttaaggcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattttatgtgatgtgggacatataa--ctcacactcgcaaaccaac 3415451  T
Q  101 aca 103  Q
    |||    
T  3415450 aca 3415448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3058316 - 3058218
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||  |||||||||  || ||||||||||||||||    
T  3058316 cttaaggcaatgggtttatggatcctcatacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctaacacttgcaaaccaac 3058219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 26544126 - 26544041
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 101  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||||||||    
T  26544126 gtttatgggtcctcttacttataacgtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaaccaaca 26544041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 3409743 - 3409651
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 102  Q
    ||||| |||||||| |||||||||||||||| |||||||| ||||||||||||||||||||   ||||||||  |||||||||||||||||||||    
T  3409743 caatgggtttatgggtcctcttacttataagatgttcaacttttactattttatctgatgtggtacatataa--ctcacacttgcaaaccaacac 3409651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 14748413 - 14748504
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 101  Q
    ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| |||||  |||||||||  |||||||||||||| |||||    
T  14748413 caatgagtttatgggtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaatcaaca 14748504  T

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Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 9062417 - 9062498
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||| |||||||  |||||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||    
T  9062417 cttaagacaatgagtttatgagtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactc 9062498  T

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Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 2377844 - 2377763
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||| | |||||  ||||||||||||    
T  2377844 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatataactc 2377763  T

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Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 10911655 - 10911574
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttac-tattttatctgatgtatgacatataactc 82  Q
    ||||| ||||| |||||||  ||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||    
T  10911655 ttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactttttttatctgatgtaggacatataactc 10911574  T

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Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16108153 - 16108072
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||| |||||| |||||||||||||   |||||||||||    
T  16108153 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacatttactcttttatctgatgtggaacatataactc 16108072  T

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Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 32460648 - 32460729
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||  |||||||||||||||||||||||||||||||||||||||  |||||  ||||||||||||    
T  32460648 cttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatacgatgtgggacatataactc 32460729  T

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Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 1127442 - 1127352
Alignment:
Q  9 aatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 101  Q
    |||| |||||||  |||||||||||||||||||||||||||||||||||||| | |||||  || ||||||  |||||| |||||||||||||    
T  1127442 aatgggtttatgagtcctcttacttataaggtgttcaacctttactattttacccgatgtgggatatataa--ctcacagttgcaaaccaaca 1127352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 6999864 - 6999945
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| || || |||||||| ||||||||| ||||||||||||||| |||||| ||||||| |||||| ||||||||||||    
T  6999864 cttaaggcagtgagtttatggatcctcttacatataaggtgttcaacttttacttttttatccgatgtaggacatataactc 6999945  T

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Target: chr6; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16454665 - 16454584
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||| |||| | |||||||||||||  |||| |||||||    
T  16454665 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttattcttttatctgatgtgggacacataactc 16454584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16454997 - 16454916
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||  |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||  |||| |||||||    
T  16454997 cttaaggcaataggtttatgggtcctattacttataaggtgttcaacctttactcttttatctgatgtgggacacataactc 16454916  T

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Target: chr6; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 1846838 - 1846741
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| |||||  ||||||| | |||||||||||||||||||||||||||||||||||||| |||||  |||||| ||   |||||||||||| |||||    
T  1846838 cttaaggcaatggatttatgggtgctcttacttataaggtgttcaacctttactattttatccgatgtgagacatagaa--ttcacacttgcaacccaac 1846741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 2579953 - 2580021
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| ||||||||||||||| |||||||||||||||| ||||||| |||||  ||||||||||||    
T  2579953 gtttatgggtcctcttacttataatgtgttcaacctttactcttttatccgatgtgggacatataactc 2580021  T

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Target: chr6; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 5958672 - 5958752
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||||| |||||||  | |||||| ||||||||||||||||||||||| ||||||| ||||||  |||||||||||    
T  5958672 ttaagacaatgagtttatgagttctcttatttataaggtgttcaacctttactgttttatccgatgtaacacatataactc 5958752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 1950267 - 1950334
Alignment:
Q  15 tttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  1950267 tttatggctcctcttacttgtaaggtgttcaacctttactcttttatccgatgtgggacatataactc 1950334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10074431 - 10074498
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||| || |||| |||||    
T  10074431 cttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgt 10074498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 5832108 - 5832174
Alignment:
Q  15 tttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 81  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||  ||||  |||||||||||    
T  5832108 tttatgggtcctcttacttataaggtgttcaacctttactcttttatccaatgtgggacatataact 5832174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10073684 - 10073737
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttact 54  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||    
T  10073684 cttaagccaatgagtttatggatcctcttacttataaggtgttcaacctttact 10073737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 10074059 - 10074140
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||| |||||| || |||| |||||  || |||||||||    
T  10074059 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacgtttacttttctatccgatgtgggatatataactc 10074140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16107768 - 16107687
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||  ||||||||||||||||||||| |||||||||| ||||||| |||||   |||||||||||    
T  16107768 cttaaggcaatgggtttatgagtcctcttacttataaggtgtttaacctttacttttttatccgatgtgacacatataactc 16107687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 593790 - 593858
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||||| |||||  |||||| |||||    
T  593790 gtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatacaactc 593858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 2843645 - 2843563
Alignment:
Q  1 cttaagacaatgtgtttatggt-tcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| ||||||||  ||||||||||||||||||||||||| |||| ||||||||| |||||   |||||||||||    
T  2843645 cttaaggcaatgagtttatggggtcctcttacttataaggtgttcaacttttattattttatccgatgtgaaacatataactc 2843563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2578511 - 2578572
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatc 62  Q
    |||||| | ||| |||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  2578511 cttaaggctatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatc 2578572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 35210551 - 35210501
Alignment:
Q  18 atggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||| |||||||||||| ||||| ||||||||||||||||||||| |||||    
T  35210551 atgggtcctcttacttacaaggtattcaacctttactattttatccgatgt 35210501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 2579560 - 2579641
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| ||||||||  ||||||||||||||||| | | ||||||||| |||| || |||||  ||||||||||||    
T  2579560 cttaaggcaatgagtttatgggccctcttacttataaggtatccgacctttacttttttgtccgatgtgggacatataactc 2579641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 14789285 - 14789325
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttact 54  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  14789285 gtttatgggtcctcttacttgtaaggtgttcaacctttact 14789325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 2579203 - 2579253
Alignment:
Q  31 cttataaggtgttcaacctttactattttatctgatgtatgacatataact 81  Q
    ||||||||||||||||| |||||| ||||||| |||||  |||||||||||    
T  2579203 cttataaggtgttcaacttttactcttttatccgatgtgggacatataact 2579253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 4e-31; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 1014326 - 1014411
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 101  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  1014326 gtttacgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa--ctcacacttgcaaaccaaca 1014411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 3669777 - 3669678
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||  |||||||||||||||||||    
T  3669777 cttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataa--ctcacacttgcaaaccaac 3669680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 20870641 - 20870741
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| || || |||||||| |||||||||||||||| |||||||||||||||||||||||||||||   |||||||   |||||||||||||||||||    
T  20870641 cttaaggcagtgggtttatgggtcctcttacttataagatgttcaacctttactattttatctgatgtggaacatatataactcacacttgcaaaccaac 20870740  T
Q  101 a 101  Q
    |    
T  20870741 a 20870741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 34835298 - 34835218
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  34835298 ttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatcggatgtgggacatataactc 34835218  T

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Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 41416252 - 41416335
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 101  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||    ||||||||||||||||    
T  41416252 gtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataact----cacttgcaaaccaaca 41416335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 45122714 - 45122648
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatg 67  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  45122714 cttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatg 45122648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 25561884 - 25561965
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||| |||||| ||||||| |||||  ||||||||||||    
T  25561884 cttaagacaatgagtttatgggtcctcttacttataaggtgttcaacgtttactcttttatccgatgtgggacatataactc 25561965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 33113435 - 33113516
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| ||||||||||||||||  |||||||||||||||||||||| |||||| ||||||||||||    
T  33113435 cttaaggcaatgagtttatgggtcctcttacttataagacgttcaacctttactattttatccgatgtaggacatataactc 33113516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 45122125 - 45122206
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||| |||| |||||||| | |||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  45122125 cttaagaaaatgagtttatgggttctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactc 45122206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 3670137 - 3670052
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 101  Q
    |||||||| ||||| ||||||||||||||| |||||||||||||||||| |||||  |||||||||  ||||||||||||||||||||    
T  3670137 gtttatgggtcctcatacttataaggtgttaaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaaccaaca 3670052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 18372789 - 18372848
Alignment:
Q  23 tcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  18372789 tcctcttacttataaggtgttcaacctttactattttatccgatgtgtgacatataactc 18372848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 3038358 - 3038439
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||| |||||||||| |||||||||||||||||||||||| |||||  ||||||||||||    
T  3038358 cttaaggcaatgggtttatgggtccttttacttataaagtgttcaacctttactattttatccgatgtgggacatataactc 3038439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9483255 - 9483316
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatc 62  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  9483255 cttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatc 9483316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 1013941 - 1014038
Alignment:
Q  3 taagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 102  Q
    |||| ||||| |||||| | |||||||||||||| |||||||||| |||||||||||||| |||||   ||||||||  |||||||||||||||||||||    
T  1013941 taaggcaatgggtttattggtcctcttacttatagggtgttcaacttttactattttatccgatgtggaacatataa--ctcacacttgcaaaccaacac 1014038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9309445 - 9309364
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| ||||| || ||||||||||||||||||||||||| |||||| ||||||| |||||  ||||||||||||    
T  9309445 cttaaggcaatgagtttaagggtcctcttacttataaggtgttcaacatttactcttttatccgatgtgggacatataactc 9309364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 18372069 - 18372122
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttactattttat 61  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  18372069 caatgagtttatggatcctcttacttataaggtgttcaacctttactattttat 18372122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 30441175 - 30441072
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataa----ggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaac 96  Q
    |||||| ||||| ||||||||  ||||||||||||||    ||||||||||||||||||||||| | |||||  |||||||||  |||||||||||||||    
T  30441175 cttaaggcaatgggtttatgggccctcttacttataattaaggtgttcaacctttactattttagccgatgtgggacatataa--ctcacacttgcaaac 30441078  T
Q  97 caacac 102  Q
    ||||||    
T  30441077 caacac 30441072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 40518672 - 40518591
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| || || |||||||| |||||||| ||||||||||||||||||||||| || ||||||||||  ||||||||||||    
T  40518672 cttaagtcattgggtttatgggtcctcttatttataaggtgttcaacctttacttttctatctgatgtgggacatataactc 40518591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 45121978 - 45122059
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||  ||||||||||||||| |||||||||||||||||||||||  |||||  ||||||||||||    
T  45121978 cttaaggcaatgagtttatgagtcctcttacttataaagtgttcaacctttactattttatgcgatgtgggacatataactc 45122059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 147528 - 147460
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  147528 gtttatgggtcctcttatttataaggtgttcaacctttactcttttatccgatgtgggacatataactc 147460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 18372349 - 18372405
Alignment:
Q  26 tcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  18372349 tcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactc 18372405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 30359686 - 30359618
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||  ||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||    
T  30359686 gtttatgagtcctcttacttataaggtgttcaacttttactcttttatctgatgtgagacatataactc 30359618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 34835564 - 34835504
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatc 62  Q
    ||||| ||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  34835564 ttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacctttactattttatc 34835504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 34835830 - 34835770
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatc 62  Q
    ||||| ||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  34835830 ttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacctttactattttatc 34835770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 40579587 - 40579635
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatc 62  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40579587 gtttatgggtcctcttacttataaggtgttcaacctttactattttatc 40579635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 3037776 - 3037843
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||||||||||| |||||||  ||||||||||||||||||||||||| |||||||||| ||| |||||    
T  3037776 cttaagacaatgggtttatgagtcctcttacttataaggtgttcaacatttactatttcatccgatgt 3037843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 5420741 - 5420663
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 79  Q
    |||||| ||||| |||||||  |||||||||||||||| |||||||||||||||||| |||| |||||  |||||||||    
T  5420741 cttaaggcaatgggtttatgagtcctcttacttataagatgttcaacctttactattctatccgatgtgggacatataa 5420663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 9482679 - 9482753
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||| |||||||  ||||   |||||||||||    
T  9482679 caatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatcccatgtggaacatataactc 9482753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 70342 - 70423
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| || || |||||||| |||||||||||||||| |||||||| |||||| ||||||| |||||  ||||||||||||    
T  70342 cttaaggcagtgggtttatgggtcctcttacttataagatgttcaacatttactcttttatccgatgtgggacatataactc 70423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 30359361 - 30359280
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| | ||| |||||||| ||||||| ||||||||||||||||| |||||| ||||||| |||||  ||||||||||||    
T  30359361 cttaaggctatgggtttatgggtcctcttgcttataaggtgttcaacatttactcttttatccgatgtgagacatataactc 30359280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 34834966 - 34834885
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||  || |||||||||||||||||| ||||||||||||||||||  ||||  ||||||||||||    
T  34834966 cttaaggcaatgagtttatgagtcatcttacttataaggtgtttaacctttactattttatccaatgtgggacatataactc 34834885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 43274847 - 43274928
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||  |||||||| |||||||||||||||  | ||||||||||||| |||||||||||||   |||||||||||    
T  43274847 cttaagacaataggtttatgggtcctcttacttataatatattcaacctttactcttttatctgatgtgaaacatataactc 43274928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 1513996 - 1514064
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||||| |||||  || |||||||||    
T  1513996 gtttaagggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggatatataactc 1514064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 25561736 - 25561792
Alignment:
Q  25 ctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 81  Q
    |||||||||||||||||||||||||||||| ||||||| |||||  |||||||||||    
T  25561736 ctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataact 25561792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 18373006 - 18373077
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 79  Q
    ||||| |||||||  |||||||| ||||||||||||||||||||||||||||||| || ||  |||||||||    
T  18373006 caatgagtttatgagtcctcttatttataaggtgttcaacctttactattttatccgaagtgggacatataa 18373077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 37544572 - 37544639
Alignment:
Q  15 tttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||||||| |||||  ||| ||||||||    
T  37544572 tttatgggtcctctttcttataatgtgttcaacctttactattttatccgatgtgcgacttataactc 37544639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18373238 - 18373292
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttacta 55  Q
    |||||||||||| ||| |||| |||||||| ||||||||||||||||||||||||    
T  18373238 cttaagacaatgggttaatggatcctcttatttataaggtgttcaacctttacta 18373292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 41972241 - 41972167
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||| |||||||| |||| | ||||||||||||||||||||||||| || |||| |||||  ||||||||||||    
T  41972241 caatgggtttatgggtcctatcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactc 41972167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 45121737 - 45121791
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||||||| ||||||||||||||||||| |||||||||||| ||||||| |||||    
T  45121737 gtttatggatcctcttacttataaggtgatcaacctttactcttttatccgatgt 45121791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 6876932 - 6876997
Alignment:
Q  3 taagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||||||||| || ||||| || ||||| ||||||||||||||||||||||| ||||||| |||||    
T  6876932 taagacaatgagtgtatgggtcatcttatttataaggtgttcaacctttacttttttatccgatgt 6876997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 8918832 - 8918913
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||  |||||||| ||||||||||||||| |||||||||||||||| |  ||||||||||  ||||| ||||||    
T  8918832 cttaagtcaataggtttatgggtcctcttacttataaagtgttcaacctttactctgctatctgatgtgggacatgtaactc 8918913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 9309062 - 9308986
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctga--tgtatgacatataactc 82  Q
    ||||| |||||||| |||||||||||||||  |||||||| |||||| ||||||||||  |||| ||||||||||||    
T  9309062 caatgggtttatgggtcctcttacttataacatgttcaacttttactcttttatctgatgtgtaggacatataactc 9308986  T

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Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 32305559 - 32305506
Alignment:
Q  9 aatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatc 62  Q
    |||| |||||| | || |||||||||||||||||||||||||||||||||||||    
T  32305559 aatgggtttataggtcttcttacttataaggtgttcaacctttactattttatc 32305506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 9608822 - 9608754
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| || ||||||||||||||||||||||||||||| || |||| ||| |  ||||||||||||    
T  9608822 gtttatgggtcatcttacttataaggtgttcaacctttacttttctatccgatatgggacatataactc 9608754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 18380111 - 18380166
Alignment:
Q  27 cttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||||||||||||||||||||||||||  |||||  || |||||||||    
T  18380111 cttacttataaggtgttcaacctttactattttattcgatgtgggatatataactc 18380166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 9609162 - 9609108
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||||||| || ||||||||||||| ||||||||||||||| || ||||||||||    
T  9609162 gtttatgggtcatcttacttataagatgttcaacctttacttttctatctgatgt 9609108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 18371763 - 18371805
Alignment:
Q  40 tgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||||||||||||||||| ||||| |||||||||||||    
T  18371763 tgttcaacctttactattttatccgatgtgtgacatataactc 18371805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 18372678 - 18372731
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatc 62  Q
    ||||| |||||||  |||||||||||||||| |||||||||||||||||||||||    
T  18372678 caatgggtttatgagtcctcttacttataag-tgttcaacctttactattttatc 18372731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 45123094 - 45123015
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||| |||  |||||||| || |||||||||  ||||||| |||||||||||||||||| |||||  ||||||||||||    
T  45123094 cttaagaaaataggtttatgggtcatcttactta--aggtgtttaacctttactattttatccgatgtgggacatataactc 45123015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 6731953 - 6731895
Alignment:
Q  42 ttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 102  Q
    ||||||||||||||||||||| |||||  |||||||||  |||||||||||||| ||||||    
T  6731953 ttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaaacaacac 6731895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 4154350 - 4154429
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||| ||||| |||||||| || ||| |||||||| |||||||||||  ||| || ||||||||||| ||||||||||||    
T  4154350 ttaaggcaatgagtttatgggtc-tctcacttataaagtgttcaacctccacttttctatctgatgtaggacatataactc 4154429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 8794188 - 8794120
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||  |||||||||||||||| |||||||| |||| | ||||||| |||||  ||||||||||||    
T  8794188 gtttatgagtcctcttacttataagatgttcaacatttattcttttatccgatgtgagacatataactc 8794120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 40518161 - 40518103
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactatttt 59  Q
    |||||| || || |||||||| |||  ||||||||||||||||||||||||||| ||||    
T  40518161 cttaaggcattgggtttatgggtccatttacttataaggtgttcaacctttactttttt 40518103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 9507864 - 9507819
Alignment:
Q  9 aatgtgtttatggttcctcttacttataaggtgttcaacctttact 54  Q
    |||| |||||||  |||||||||||||||||| |||||||||||||    
T  9507864 aatgggtttatgagtcctcttacttataaggtattcaacctttact 9507819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 9620744 - 9620825
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||||| |||||||| ||| ||||| | |||| || |||||| |||  ||||||||||||    
T  9620744 cttaaggcaatgagtttatgggtcctctcacttataaagtgatcaacttctacttttctatctgttgtgagacatataactc 9620825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 6651552 - 6651512
Alignment:
Q  42 ttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||||||||||||||| |||||  ||||||||||||    
T  6651552 ttcaacctttactattttatccgatgtgagacatataactc 6651512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 20130525 - 20130462
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatata 78  Q
    |||||||| || ||||||||| |||||||||||| |||||| ||||||| |||||  ||||||||    
T  20130525 gtttatggatcatcttactta-aaggtgttcaacttttactcttttatccgatgtgagacatata 20130462  T

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Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 55933191 - 55933288
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 101  Q
    ||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||  ||||||||||||||||||||    
T  55933191 ttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacccttactattttatccgatgtaggacatataa--ctcacacttgcaaaccaaca 55933288  T

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Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 50630821 - 50630920
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||  ||||| |||||||||||||    
T  50630821 cttaaggcaatgggtttatgggtcctcttacttataatgtgttcaacctttactattttatccgatgtaggacatataa--ctcacgcttgcaaaccaac 50630918  T

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Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 52884977 - 52884896
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  52884977 cttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactc 52884896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 25483426 - 25483345
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||    
T  25483426 cttaaggcaatgggtttatggatcctcttacttataagatgttcaacctttactattttatccgatgtgagacatataactc 25483345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 49880250 - 49880152
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| || || |||||||| |||||||||||||||||||||||||||||||||||||||   ||||  |||||||||  |||||||||||||||||||    
T  49880250 cttaaggcagtgggtttatgggtcctcttacttataaggtgttcaacctttactattttattcaatgtgggacatataa--ctcacacttgcaaaccaac 49880153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 54017661 - 54017742
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||    
T  54017661 cttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatctgacgtgggacatataactc 54017742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 41370446 - 41370349
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 101  Q
    ||||| ||||| |||||||| |||||||||||||||||| |||||| |||||||||||||| ||| |  |||||||||  ||||||||||||||||||||    
T  41370446 ttaaggcaatgggtttatgggtcctcttacttataaggttttcaacatttactattttatccgatttgggacatataa--ctcacacttgcaaaccaaca 41370349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 54109003 - 54108936
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  54109003 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgt 54108936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 54936286 - 54936219
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||||| ||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  54936286 cttaaggcaatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgt 54936219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 52884785 - 52884704
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||| | || ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  52884785 cttaaggcaatgggtttatcgatcatcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactc 52884704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 3244518 - 3244598
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||||| |||||||| |||||||||||||||| ||||||||||||||| || |||| |||||  ||||||||||||    
T  3244518 ttaagacaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgagacatataactc 3244598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 39404475 - 39404407
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| |||||||||||||||||||||| ||||||||| |||||||||||||  ||||||||||||    
T  39404475 gtttatgggtcctcttacttataaggtgttccacctttactcttttatctgatgtgggacatataactc 39404407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 50002516 - 50002423
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaac 96  Q
    ||||||||||||  ||||||| |||||||||||| || |||||||||||||||| ||||||| |||||  |||||||||  |||||||||||||||    
T  50002516 cttaagacaatggatttatgggtcctcttacttaaaaagtgttcaacctttactcttttatccgatgtgagacatataa--ctcacacttgcaaac 50002423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 45496895 - 45496828
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||||||||| |||||||| |||||    
T  45496895 cttaagacaatgagtttataggtcctcttacttataaggtgttcaacctttacgattttatccgatgt 45496828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 2741146 - 2741080
Alignment:
Q  16 ttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| |||||||||||||||||| |||||||||||||||| ||||||||||  ||||||||||||    
T  2741146 ttatgggtcctcttacttataaggtattcaacctttactattctatctgatgtgggacatataactc 2741080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 22028027 - 22028105
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 79  Q
    |||||| |||| ||||||||| |||||||||||||||||||||||||||||  ||||||||| |||||  |||||||||    
T  22028027 cttaaggcaatatgtttatgggtcctcttacttataaggtgttcaacctttcgtattttatccgatgtgggacatataa 22028105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 54343089 - 54343147
Alignment:
Q  23 tcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 81  Q
    |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||    
T  54343089 tcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataact 54343147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 54741244 - 54741322
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 79  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||||||||||||| || |||| |||||  |||||||||    
T  54741244 cttaagacaatctgtgtatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataa 54741322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1731713 - 1731794
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||  |||||||| |||||||| ||||||| ||||||||||||||| |||||||||||||  ||||||||||||    
T  1731713 cttaaggcaattggtttatgggtcctcttatttataagatgttcaacctttactgttttatctgatgtgggacatataactc 1731794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 4955383 - 4955464
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||  |||||||||||||||||||||||||||| ||||||||||| ||| |  ||||||||||||    
T  4955383 cttaaggcaatgggtttatgagtcctcttacttataaggtgttcaaccttaactattttatccgatatgagacatataactc 4955464  T

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Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 36608727 - 36608808
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||||||  ||||||| ||||||||||||| ||||||||||| |||||| ||||||| |||||  ||||||||||||    
T  36608727 cttaagacaatggatttatggatcctcttacttatgaggtgttcaacttttactcttttatccgatgttggacatataactc 36608808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 39792926 - 39793007
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| ||||| |||||||||| ||||||||||||||||| |||||| || ||||||||||  ||||||||||||    
T  39792926 cttaaggcaatgagtttacggttcctctttcttataaggtgttcaacatttacttttctatctgatgtgggacatataactc 39793007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 41707530 - 41707611
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||| |||||||| | || ||||||||| ||||||||||||||||| ||||||| |||||  ||||||||||||    
T  41707530 cttaagacaatgagtttatgggttcttttacttatatggtgttcaacctttactcttttatccgatgtgggacatataactc 41707611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18932815 - 18932883
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgta 69  Q
    |||||| ||||| |||||||| |||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  18932815 cttaaggcaatgggtttatgggtcctcttatttataaggtattcaacctttactattttatccgatgta 18932883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 49076515 - 49076595
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||||| |||||| | |||||||||||||||||||||||||||||||| ||||||| ||| |   |||||||||||    
T  49076515 ttaagacaatgggtttataggtcctcttacttataaggtgttcaacctttactgttttatccgatatggtacatataactc 49076595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 44621092 - 44621025
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||||||||||| |||||||   ||||||||||||||||||||||||||||||| ||||||| |||||    
T  44621092 cttaagacaatgagtttatgtgccctcttacttataaggtgttcaacctttactgttttatccgatgt 44621025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 54017768 - 54017835
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||||||||||| |  ||||| |||||||||||||||||||||||||||||||| ||||||| |||||    
T  54017768 cttaagacaatgggaatatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgt 54017835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3340897 - 3340816
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| || || |||||||| ||||||||||||||||||| |||||||||||| ||| ||||||||   ||||||||||||    
T  3340897 cttaaggcagtgggtttatgggtcctcttacttataaggtgctcaacctttactctttcatctgatgcgggacatataactc 3340816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 4390189 - 4390234
Alignment:
Q  23 tcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  4390189 tcctcttacttataaggtgttcaacctttactcttttatctgatgt 4390234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 6975522 - 6975603
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||| ||||  ||||||  |||||||||||||||| | ||||||||||||||||||||| |||||  ||||||||||||    
T  6975522 cttaagataatggatttatgagtcctcttacttataagatattcaacctttactattttatcggatgtgagacatataactc 6975603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 34646715 - 34646796
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||  |||||||| |||||||||||||||| |||||| ||||||| |||||  ||||||||||||    
T  34646715 cttaaggcaatgagtttatgagtcctcttagttataaggtgttcaacatttactgttttatccgatgtgggacatataactc 34646796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 36629327 - 36629246
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| ||||||||||||||||||||| ||| |||||| || |||| |||||  ||||||||||||    
T  36629327 cttaaggcaatgagtttatgggtcctcttacttataaggtgtttaacttttacttttctatccgatgtgggacatataactc 36629246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 43174584 - 43174515
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttact-attttatctgatgtatgacatataactc 82  Q
    |||||||  ||||||||||||||||||||||||||||||||  ||||||||||||| || ||||||||||    
T  43174584 gtttatgtgtcctcttacttataaggtgttcaacctttactctttttatctgatgtgtggcatataactc 43174515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 44620362 - 44620305
Alignment:
Q  25 ctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||||||||||||||||||||||||||||||||  ||||  ||||||||||||    
T  44620362 ctcttacttataaggtgttcaacctttactattttatcccatgtgggacatataactc 44620305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 2740777 - 2740709
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| | |||||||||||||||||||||||||||||||| || |||| |||||  ||||||||||||    
T  2740777 gtttataggtcctcttacttataaggtgttcaacctttactgttctatccgatgtgggacatataactc 2740709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 10245996 - 10245929
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||  | ||||||||||    
T  10245996 gtttatggt-cctcttacttataaggtgttcaacctttactcttttatccgatgtggggcatataactc 10245929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 20826294 - 20826226
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| | ||||||||||||| ||||||||| |||||||||||||| |||||  ||||||||||||    
T  20826294 gtttatgggttctcttacttataacgtgttcaacttttactattttatccgatgtgggacatataactc 20826226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 22028436 - 22028515
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaaccttta--ctattttatctgatgtatgacatataa 79  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||||   | ||||||| |||||| |||||||||    
T  22028436 ttaagacaatgagtttatgggtcctcttactaataaggtgttcaacctttatttttttttatccgatgtaggacatataa 22028515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 44620737 - 44620669
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| ||||||||||||||| ||||||||||| |||||||| ||| |||||  ||||||||||||    
T  44620737 gtttatgggtcctcttacttataaagtgttcaacctctactatttcatccgatgtgggacatataactc 44620669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 49302996 - 49302913
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttactt--ataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||||||||||  ||||| ||||||||||||||| |||||| ||||||  ||||||||||||    
T  49302996 cttaaggcaatgggtttatgggtcctcttacttttataagatgttcaacctttacttttttatttgatgtgggacatataactc 49302913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 3700433 - 3700374
Alignment:
Q  23 tcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||| |||||||||||||||||||| |||||| ||||||| |||||| ||||||||||||    
T  3700433 tccttttacttataaggtgttcaacatttactcttttatccgatgtaggacatataactc 3700374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 16888884 - 16888963
Alignment:
Q  3 taagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||| |||||| | | |||||||||||||||| ||||||||||||| || |||| |||||  ||||||||||||    
T  16888884 taagacaatgagtttataggttctcttacttataaggtattcaacctttacttttctatccgatgtgggacatataactc 16888963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 44620443 - 44620360
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctc 84  Q
    |||||| ||||| ||||||||   |||||| ||||||||||||||||||||||| ||||||| |||||   |||||||||||||    
T  44620443 cttaaggcaatgggtttatgggctctcttatttataaggtgttcaacctttactgttttatccgatgtggaacatataactctc 44620360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 54108612 - 54108565
Alignment:
Q  15 tttatggttcctcttacttataaggtgttcaacctttactattttatc 62  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||    
T  54108612 tttatgggtccttttacttataaggtgttcaacctttactattttatc 54108565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 11348410 - 11348475
Alignment:
Q  17 tatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||| |||||| |||||||| |||||||||||  ||||||||||||||||||  |||||||||||    
T  11348410 tatggatcctctcacttataaagtgttcaacctccactattttatctgatgtagaacatataactc 11348475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 32941189 - 32941270
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||   ||||||| ||||||||||||||||||||||| || | || |||||| ||||||||||||    
T  32941189 cttaaggcaatgagtttatgagccctcttatttataaggtgttcaacctttactgttctttccgatgtaagacatataactc 32941270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 34004658 - 34004730
Alignment:
Q  9 aatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||| |||||||| |||||||||||||||| ||||||||||||| | |||||||  |||| |||||||||||||    
T  34004658 aatgagtttatgggtcctcttacttataagttgttcaacctttagt-ttttatcatatgtgtgacatataactc 34004730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 36572109 - 36572028
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| |||||  ||||||| || |||||||||||||||||||||| |||||| ||||||  |||||  ||||||||||||    
T  36572109 cttaaggcaatggatttatgggtcttcttacttataaggtgttcaacatttactcttttattcgatgtgggacatataactc 36572028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 50459811 - 50459730
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||| |||| |||||||  |||||||||||||||| ||||||||||||||| ||||| | |||||   |||||||||||    
T  50459811 cttaagataatgggtttatgagtcctcttacttataagatgttcaacctttactcttttaaccgatgtggaacatataactc 50459730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 51768126 - 51768207
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||| |||||||  |||||||| |||||||||||||||| |||||| || |||  ||| || ||||||||||||    
T  51768126 cttaagacaatgagtttatgagtcctcttatttataaggtgttcaacatttactcttatattcgatataggacatataactc 51768207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 20825913 - 20825845
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| | |||||| ||||||||||||||||||||||| ||||||| |||||   |||||||||||    
T  20825913 gtttatgggtgctcttatttataaggtgttcaacctttactcttttatccgatgtggaacatataactc 20825845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 39404095 - 39404027
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||  ||||||||||||||| |||||||||||||||| ||||||   ||||| ||||||||||||    
T  39404095 gtttatgagtcctcttacttataaagtgttcaacctttactcttttattcaatgtaggacatataactc 39404027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 50788087 - 50788147
Alignment:
Q  39 gtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 101  Q
    |||||||||||||||||||||||| |||||  |||||||||  || |||||||||||||||||    
T  50788087 gtgttcaacctttactattttatccgatgtgggacatataa--cttacacttgcaaaccaaca 50788147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 3341203 - 3341137
Alignment:
Q  16 ttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||||||||||||| ||||| |||||||||| |||||||  ||||  ||||||||||||    
T  3341203 ttatgggtcctcttacttataaagtgtttaacctttactcttttatccaatgtgggacatataactc 3341137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 10246424 - 10246358
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataac 80  Q
    |||||||| |||||| ||||||||| ||||||||||||||| ||||||| ||| |  ||||||||||    
T  10246424 gtttatgggtcctctaacttataagatgttcaacctttactcttttatccgatttgagacatataac 10246358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 45489421 - 45489475
Alignment:
Q  25 ctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 79  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||  |||||||||    
T  45489421 ctcttacttatatggtgttcaacctttactcttttatccgatgtgagacatataa 45489475  T

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Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 44621492 - 44621435
Alignment:
Q  25 ctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||||||||||||| |||||||||| |||||||  ||||  ||||||||||||    
T  44621492 ctcttacttataaggtgtttaacctttactgttttatcccatgttggacatataactc 44621435  T

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Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 16889615 - 16889683
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||  |||||||||||||||||| ||||||||||||| || |||| ||| |  ||||||||||||    
T  16889615 gtttatgaatcctcttacttataaggtattcaacctttacttttctatccgatttgagacatataactc 16889683  T

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Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 44621011 - 44620968
Alignment:
Q  25 ctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||||||||||||||||||||||||||||  ||||||| |||||    
T  44621011 ctcttacttataaggtgttcaacctttacagttttatccgatgt 44620968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 49076910 - 49076955
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactatttta 60  Q
    |||||||| | |||||||| |||||||||||||||||||||||||||    
T  49076910 gtttatgggttctcttact-ataaggtgttcaacctttactatttta 49076955  T

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Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 9498722 - 9498822
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||  |||||| ||||||||||||    
T  9498722 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattctatctgatgtgagacatataa--ctcacatttgcaaaccaac 9498819  T
Q  101 aca 103  Q
    |||    
T  9498820 aca 9498822  T

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Target: chr5; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 18603188 - 18603269
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  18603188 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactc 18603269  T

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Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 32487483 - 32487386
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| |||||  |||||||||  |||||||||||||||||||    
T  32487483 cttaaggcaatgggtttatgggtcctcttacttata-ggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaaccaac 32487387  T

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Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 6500912 - 6500814
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||| |||||||| |||| ||| ||||||||||||||||||||||||||||||| |||||  |||||||||  |||||||||||||||||||    
T  6500912 cttaaggcaatgagtttatgggtccttttatttataaggtgttcaacctttactattttatccgatgt-ggacatataa--ctcacacttgcaaaccaac 6500816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6500540 - 6500443
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||| |||||  | |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  |||||||||||||||||||    
T  6500540 cttaaggcaatgggtttaaaggtcctcttacttataaggtgttcaacctttactattttatccgatgt-ggacatataa--ctcacacttgcaaaccaac 6500444  T

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Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 11417045 - 11417126
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||   |||||||||||    
T  11417045 cttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatataactc 11417126  T

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Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 27502104 - 27502202
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||  |||||||| ||||||||||||||||||||| ||||||||||||||||||  ||||  |||||||||  |||||||||||||||||||    
T  27502104 cttaaggcaataggtttatgggtcctcttacttataaggtgtttaacctttactattttatccaatgtgggacatataa--ctcacacttgcaaaccaac 27502201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 41170724 - 41170643
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||    
T  41170724 cttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactc 41170643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 36492293 - 36492378
Alignment:
Q  9 aatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaac 96  Q
    ||||||||||| | |||||||||||||||||||||||||||||||| ||||||| |||||  |||||||||  |||||||||||||||    
T  36492293 aatgtgtttattggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataa--ctcacacttgcaaac 36492378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 26075230 - 26075308
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 79  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||  |||||||||    
T  26075230 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgagacatataa 26075308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 40296390 - 40296464
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||| |||||||| ||||||||||||||||||||||||||||| |||||||||| |||||  ||||||||||||    
T  40296390 caatgggtttatgggtcctcttacttataaggtgttcaaccttttctattttatccgatgtgggacatataactc 40296464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 13415841 - 13415909
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| |||||  ||||||||||||    
T  13415841 gtttatgggtcctcttacttataaggtgttcaacctttactaatttatccgatgtgggacatataactc 13415909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 25328012 - 25327944
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| ||||||||||||||||||||||||| |||||| ||||||| |||||| ||||||||||||    
T  25328012 gtttatgggtcctcttacttataaggtgttcaacttttactgttttatccgatgtaggacatataactc 25327944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 3295090 - 3295172
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgca 93  Q
    ||||| |||||||| || ||||||||||||||||||||||||||||||||||||| |||||  ||||||||   ||||||||||||    
T  3295090 caatgggtttatgggtcttcttacttataaggtgttcaacctttactattttatccgatgtgggacatata---ctcacacttgca 3295172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 3295412 - 3295479
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  3295412 cttaaggcaattggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgt 3295479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 7768925 - 7768837
Alignment:
Q  16 ttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacacaaat 106  Q
    |||||| |||| ||||||||||||||||||||||||| ||||||||| |||||| || ||||||  |||||||||| ||||||||| ||||    
T  7768925 ttatgggtccttttacttataaggtgttcaacctttattattttatccgatgtaggatatataa--ctcacacttgaaaaccaacaaaaat 7768837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 299579 - 299498
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| | ||| |||||||| || ||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  299579 cttaaggctatgagtttatgggtcatcttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactc 299498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 624273 - 624187
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 102  Q
    |||||||| || |||||||||||| |||||||||||||||||||||||   ||||  |||||||||  |||||||||||||||||||||    
T  624273 gtttatgggtcatcttacttataacgtgttcaacctttactattttatacaatgtgggacatataa--ctcacacttgcaaaccaacac 624187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6224286 - 6224205
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| | ||| |||||||| |||||||||||||||||||||||||||||||| ||||||| || ||  ||||||||||||    
T  6224286 cttaaggcgatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgaagtgggacatataactc 6224205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 26074214 - 26074295
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| ||| |||| ||||||||| ||| |||||||||||||||||| ||||||| ||||| |||||||||||||    
T  26074214 cttaaggcaatgggttcatgggtcctcttacatatgaggtgttcaacctttacttttttatccgatgtgtgacatataactc 26074295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 26074702 - 26074621
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||| ||| |   |||||||||||    
T  26074702 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatatggaacatataactc 26074621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 29549331 - 29549416
Alignment:
Q  9 aatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaac 96  Q
    ||||||||||||| || ||||||||||| |||||||| |||||||||||||||||||| |   ||||||||  |||||||||||||||    
T  29549331 aatgtgtttatgggtcttcttacttatatggtgttcatcctttactattttatctgatatggaacatataa--ctcacacttgcaaac 29549416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 15370175 - 15370108
Alignment:
Q  15 tttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||  |||||  ||||||||||||    
T  15370175 tttatgggtcctcttacttataagatgttcaacctttactattttattcgatgtgggacatataactc 15370108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 41632859 - 41632792
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 81  Q
    |||||||| |||||||||||||||||||||||||||||||| || |||| |||||  |||||||||||    
T  41632859 gtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataact 41632792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 33747861 - 33747783
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 79  Q
    |||||| ||||| |||||||| ||||||||||||||| || || |||||||||||||||||| |||||  |||||||||    
T  33747861 cttaaggcaatgagtttatggatcctcttacttataaagtatttaacctttactattttatccgatgtgggacatataa 33747783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 12662720 - 12662801
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||||||  ||||||| |  ||||||||||||  ||||||||||||||||||||||| |||||  ||||||||||||    
T  12662720 cttaagacaatggatttatgggttttcttacttataaaatgttcaacctttactattttatccgatgtgggacatataactc 12662801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 26074850 - 26074931
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||  |||||||| ||||| ||||||||  |||||||||||||||| ||||||| |||||  ||||||||||||    
T  26074850 cttaagacaataggtttatgggtcctcctacttatattgtgttcaacctttactcttttatccgatgtgggacatataactc 26074931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 35150096 - 35150016
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||||||  ||||||| || ||||||||||||||||||||||||| ||| ||||||| |||||  ||||||||||||    
T  35150096 cttaagacaatggatttatgggtc-tcttacttataaggtgttcaaccttgactcttttatccgatgtgggacatataactc 35150016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 41635260 - 41635325
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatg 67  Q
    |||||||||||  ||||||| |||||||| |||||||||||||||| |||||| ||||||||||||    
T  41635260 ttaagacaatggatttatggatcctcttatttataaggtgttcaacatttactcttttatctgatg 41635325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 623895 - 623810
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 101  Q
    |||||||| ||  ||||||| ||| ||||||||||||||||||| |||| |||||  |||||||||  ||||||||||||||||||||    
T  623895 gtttatggctcaacttacttgtaaagtgttcaacctttactattatatccgatgtgagacatataa--ctcacacttgcaaaccaaca 623810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 26074395 - 26074327
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| |||||||||||||||||||||||| ||||| | || ||||||||||  ||||||||||||    
T  26074395 gtttatgggtcctcttacttataaggtgttcaatctttagttttctatctgatgtgggacatataactc 26074327  T

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Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 42405677 - 42405745
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||  |||| |||||| |||||||||||||||||||||||||||| |||||  ||||||||||||    
T  42405677 gtttatgagtccttttacttgtaaggtgttcaacctttactattttatccgatgttggacatataactc 42405745  T

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Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 301025 - 300970
Alignment:
Q  25 ctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataac 80  Q
    |||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||    
T  301025 ctcttacttataaggtattcaacctttactgttttatctgatgtgggacatataac 300970  T

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Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5723859 - 5723957
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||||||||   || |||| | ||||||| ||||| ||||||||| |||| ||||||||| |||||  |||||||||  |||||||||||||||||||    
T  5723859 cttaagacaataaattaatgggttctcttacatataatgtgttcaacttttattattttatccgatgtgggacatataa--ctcacacttgcaaaccaac 5723956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 35167920 - 35167973
Alignment:
Q  15 tttatggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    ||||||| || || |||||||||||||||||||||||||| |||||||||||||    
T  35167920 tttatgggtcatcctacttataaggtgttcaacctttactcttttatctgatgt 35167973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 1028598 - 1028666
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| ||||||||||||||| ||||||| |||||||| || |||| |||||  ||||||||||||    
T  1028598 gtttatgggtcctcttacttataaagtgttcatcctttacttttctatccgatgtgggacatataactc 1028666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 35914914 - 35914858
Alignment:
Q  26 tcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||||||  ||||||||||||||| ||||||| ||||| |||||||||||||    
T  35914914 tcttacttataaaatgttcaacctttactcttttatccgatgtgtgacatataactc 35914858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 26590992 - 26591031
Alignment:
Q  15 tttatggttcctcttacttataaggtgttcaacctttact 54  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  26590992 tttatggatcctcttacttataaggtgttcaacctttact 26591031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15370492 - 15370439
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttact 54  Q
    |||||| | ||| |||||||| ||||||||||||||||||||||||| ||||||    
T  15370492 cttaaggctatgggtttatgggtcctcttacttataaggtgttcaacatttact 15370439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 36568635 - 36568716
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| ||||| || || ||| |||||||||||||||||| |||||| || |||| |||||  ||||||||||||    
T  36568635 cttaaggcaatgggtttacgggtcatctcacttataaggtgttcaacttttacttttctatccgatgtgggacatataactc 36568716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 34753093 - 34753173
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 81  Q
    |||||| ||||  |||||||| || |||||||||||||||||||||| |||||| || ||||  ||||  |||||||||||    
T  34753093 cttaaggcaatcggtttatgggtcttcttacttataaggtgttcaacttttacttttctatccaatgtgggacatataact 34753173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 6225104 - 6225053
Alignment:
Q  31 cttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||||||||||||| | |||||||||||||  || |||||||||    
T  6225104 cttataaggtgttcaacctttattcttttatctgatgtgggatatataactc 6225053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 24489274 - 24489353
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |  ||||||| |||||||||| ||||||| || || ||||||||||  ||||||||||||    
T  24489274 cttaaggcaatgggtttatgggt--tcttactaataaggtgtttaaccttttcttttctatctgatgtgggacatataactc 24489353  T

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Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 38427637 - 38427552
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcaca 87  Q
    ||||||||||||  || |||| |||||| ||||||||| ||||||||||||||| || ||||  ||||  |||||||||||| ||||    
T  38427637 cttaagacaatggattaatgggtcctct-acttataagatgttcaacctttacttttctatccaatgtgggacatataactcacaca 38427552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 19275618 - 19275543
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatat 77  Q
    ||||||||||||  ||||||| || |||| |||||||| |||||||||| |||| || |||||||| || |||||||    
T  19275618 cttaagacaatgaatttatgggtcttcttccttataag-tgttcaacctctacttttctatctgatttaagacatat 19275543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 39309760 - 39309693
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||| ||||||| |||||| ||||||||| |||||  ||||||| |||||  ||||||||||||    
T  39309760 gtttatggt-cctcttatttataatgtgttcaacatttacccttttatccgatgtgggacatataactc 39309693  T

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Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 14681600 - 14681501
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||||||||| ||||||||  ||||||||||| |||||||||||||||||||||||||||||||||  |||||||||  || ||||||||||||||||    
T  14681600 cttaagacaatgggtttatgggccctcttacttacaaggtgttcaacctttactattttatctgatgtgggacatataa--cttacacttgcaaaccaac 14681503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 37533078 - 37533177
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||  ||||  |||||||||  |||||||||||||||||||    
T  37533078 cttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataa--ctcacacttgcaaaccaac 37533175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 6054650 - 6054570
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 81  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||  |||||||||||    
T  6054650 cttaaggcaatgtgtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtgagacatataact 6054570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1085684 - 1085765
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||  ||||||||||||    
T  1085684 cttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgggacatataactc 1085765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7517670 - 7517589
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  7517670 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactc 7517589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7554115 - 7554034
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| | ||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  7554115 cttaaggctatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactc 7554034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 29157655 - 29157559
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaa 99  Q
    |||||| |||||  ||||||| || ||||||||||||||||||||||||||||||||||||| | |||  |||||||||  ||||||||||||||||||    
T  29157655 cttaaggcaatggatttatgggtcgtcttacttataaggtgttcaacctttactattttatccggtgtgggacatataa--ctcacacttgcaaaccaa 29157559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 11845281 - 11845200
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| |||||  ||||||| |||||||||||||||||||||||||||||||||||||||| |||||   |||||||||||    
T  11845281 cttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatataactc 11845200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 22566730 - 22566811
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||  ||||||| ||||    
T  22566730 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatattactc 22566811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22567107 - 22567174
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||    
T  22567107 cttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgt 22567174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 45434713 - 45434646
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 81  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||  |||||||||||    
T  45434713 gtttatgggtcctcttacttataaggtgttcaacctttacttttttatccgatgtgggacatataact 45434646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 30245561 - 30245503
Alignment:
Q  24 cctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||    
T  30245561 cctcttacttataaggtgttcaacctttactcttttatctgatgtgggacatataactc 30245503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 23445 - 23526
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||  |||||||| ||||||||||||||||||||||||||||||||||| |||| |||||   |||||||||||    
T  23445 cttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattgtatccgatgtggaacatataactc 23526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16569286 - 16569205
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||||||||||||||||| ||||||||||||| || |||| |||||  ||||||||||||    
T  16569286 cttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactc 16569205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 16596376 - 16596457
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||||||||||||||||| ||||||||||||| || |||| |||||  ||||||||||||    
T  16596376 cttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactc 16596457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 19122821 - 19122741
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| |||||  ||||||  |||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  19122821 cttaaggcaatggatttatgagtcctcttacttataaggtgttcaacctttactattttatccgatgt-ggacatataactc 19122741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 30244360 - 30244279
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||  |||||||||||||||||| ||||||||||||| ||||||| |||||  ||||||||||||    
T  30244360 cttaaggcaatgggtttatgagtcctcttacttataaggtcttcaacctttactcttttatccgatgtgggacatataactc 30244279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 30245167 - 30245086
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| || ||||||||||||||||||||||||||||| ||||||| |||||   |||||||||||    
T  30245167 cttaaggcaatgagtttatgggtcgtcttacttataaggtgttcaacctttactcttttatccgatgtggaacatataactc 30245086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 34218102 - 34218183
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||| |||||||  |||||| |||||||||||||||||| |||||| ||||||| |||||  ||||||||||||    
T  34218102 cttaagacaatgggtttatgagtcctctcacttataaggtgttcaacatttacttttttatccgatgtgagacatataactc 34218183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 37533432 - 37533513
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| |||||  ||||||| |||||||||||||||||||||||||||||||||||||||   |||||  |||||||||||    
T  37533432 cttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattttattcaatgtagaacatataactc 37533513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 40094842 - 40094923
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| ||| |||||||| ||||||||||||||||||||| |||||||||| ||||||  |||||  ||||||||||||    
T  40094842 cttaagacgatgggtttatgggtcctcttacttataaggtgttgaacctttactcttttattcgatgtgagacatataactc 40094923  T

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Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 118377 - 118449
Alignment:
Q  9 aatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 81  Q
    |||| |||||||| ||||||||||||| |||||||||||||||||| || ||||||||||  |||||||||||    
T  118377 aatgggtttatggatcctcttacttattaggtgttcaacctttacttttctatctgatgtgggacatataact 118449  T

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Target: chr7; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 24177524 - 24177444
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||| ||||| |||||||| ||| ||||||||||||||||||| |||||||| ||||||| |||||  ||||||||||||    
T  24177524 ttaaggcaatgggtttatgggtccgcttacttataaggtgttcagcctttactcttttatccgatgtgggacatataactc 24177444  T

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Target: chr7; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 47129172 - 47129104
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||| |||||  ||||||||||||    
T  47129172 gtttatgggtcctcttacttataagaggttcaacctttactattttatccgatgtgagacatataactc 47129104  T

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Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 24838769 - 24838850
Alignment:
Q  1 cttaagacaatgtgtttatggttcct-cttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 81  Q
    |||||||||| | |||||||| |||| |||||||||||||||||||||||||||| ||||||  |||||  |||||||||||    
T  24838769 cttaagacaacgggtttatggatccttcttacttataaggtgttcaacctttactcttttattcgatgtgagacatataact 24838850  T

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Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 36939801 - 36939882
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| |||||  ||||||| ||||||||||||||||||||||||| |||||||||||||  ||| |  ||||||||||||    
T  36939801 cttaaggcaatggatttatgggtcctcttacttataaggtgttcaacttttactattttatacgatttgggacatataactc 36939882  T

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Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 41910662 - 41910743
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||||| | ||||||||| ||||||||||||| ||||||| |||||  ||||||||||||    
T  41910662 cttaagccaatgggtttatgggtcctctcagttataaggtattcaacctttactcttttatccgatgtgggacatataactc 41910743  T

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Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 30255406 - 30255350
Alignment:
Q  24 cctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataac 80  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||    
T  30255406 cctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataac 30255350  T

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Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 40230359 - 40230439
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 81  Q
    |||||||| ||| |||||||| |||||||||||||||| |||||||| |||||| ||||||  |||||  |||||||||||    
T  40230359 cttaagactatgggtttatgggtcctcttacttataagatgttcaacttttacttttttattcgatgtgggacatataact 40230439  T

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Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 28301613 - 28301692
Alignment:
Q  3 taagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||| ||||| |||||||| ||||||||||||||||||||||| | |||||| || |||| |||||  ||||||||||||    
T  28301613 taaggcaatgggtttatgggtcctcttacttataaggtgttcagcttttacttttctatccgatgtgagacatataactc 28301692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 36109007 - 36109066
Alignment:
Q  23 tcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||  || |||||||||    
T  36109007 tcctcttacttataaggtgttcaacctttactcttttatccgatgtgagaaatataactc 36109066  T

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Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9901733 - 9901654
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||| |||||||| |||||| || |||||| ||||||||||||||| ||||||| |||||  ||||||||||||    
T  9901733 cttaagacaatgagtttatggatcctct-acgtataagatgttcaacctttactgttttatccgatgt-ggacatataactc 9901654  T

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Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 36534865 - 36534930
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 79  Q
    |||||||| ||||||||||||||||||||||||||| |||| ||||||| || ||  |||||||||    
T  36534865 gtttatgggtcctcttacttataaggtgttcaacctctactgttttatccgaggtgggacatataa 36534930  T

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Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 36623050 - 36622969
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| |||||  ||||||| ||||| |||||||||  |||| |||||||||||||||||| |||||  ||||||||||||    
T  36623050 cttaaggcaatggatttatggatcctcctacttataaaatgtttaacctttactattttatccgatgtgggacatataactc 36622969  T

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Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 45754805 - 45754725
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| | ||| |||||||  || |||||||||||||||||||||| |||||||||||||| |||||  ||||||||||||    
T  45754805 cttaaggctatgggtttatgagtcatcttacttataaggtgttcaacatttactattttatccgatgt-ggacatataactc 45754725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 30244769 - 30244710
Alignment:
Q  23 tcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| ||||||||||||||||||||||| |||||||  ||||  ||||||||||||    
T  30244769 tcctcttatttataaggtgttcaacctttactcttttatccaatgtgggacatataactc 30244710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 45433307 - 45433264
Alignment:
Q  25 ctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||||||||||||||||||||||||||||| ||||||| |||||    
T  45433307 ctcttacttataaggtgttcaacctttactcttttatccgatgt 45433264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1085316 - 1085377
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatc 62  Q
    |||||| ||||| |||||||| | ||||||||||| || |||||||| ||||||||||||||    
T  1085316 cttaaggcaatgagtttatgggttctcttacttatgagttgttcaacttttactattttatc 1085377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 30032644 - 30032571
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcaca 87  Q
    |||||||| | |||||||||||||||||||||||  ||||| ||||||  |||||  |||||||||||| ||||    
T  30032644 gtttatggatactcttacttataaggtgttcaacacttactcttttattcgatgtgggacatataactcacaca 30032571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 43241585 - 43241504
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||  |||||||  |||| ||||||||||||||||||||||||| | ||||||| |||||   |||||||||||    
T  43241585 cttaagtcaataagtttatgagtccttttacttataaggtgttcaacctttatttttttatccgatgtggaacatataactc 43241504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 8128522 - 8128590
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| ||||||||| |||||||||||||||||||| | || |||| ||| |  ||||||||||||    
T  8128522 gtttatgggtcctcttacatataaggtgttcaacctttatttttctatccgatatgggacatataactc 8128590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 41854699 - 41854644
Alignment:
Q  26 tcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||| |||||||||||||||||||||||| ||||| |||||||  ||||||||||||    
T  41854699 tcttgcttataaggtgttcaacctttactctttta-ctgatgtgggacatataactc 41854644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 40094502 - 40094543
Alignment:
Q  41 gttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||||| |||||||||||||  ||||||||||||    
T  40094502 gttcaacctttactcttttatctgatgttggacatataactc 40094543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30253582 - 30253534
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacct 49  Q
    |||||| ||||| |||||||| | |||||||||||||||| ||||||||    
T  30253582 cttaaggcaatgagtttatgggttctcttacttataaggtcttcaacct 30253534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 44361545 - 44361608
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatata 78  Q
    |||||||| || ||||||||| |||||||||||| |||||| ||||||| |||||  ||||||||    
T  44361545 gtttatggatcatcttactta-aaggtgttcaacttttactcttttatccgatgtgagacatata 44361608  T

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Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 5543066 - 5543165
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  |||||||||||||||||||    
T  5543066 cttaaggcaataggtttatggatcctcttacttataaggtgttcaacctttactattttatcggatgtgggacatataa--ctcacacttgcaaaccaac 5543163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 36178673 - 36178772
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||| |||    
T  36178673 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaactaac 36178770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 37106270 - 37106179
Alignment:
Q  9 aatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 102  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  |||||||||||||||||||||    
T  37106270 aatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaaccaacac 37106179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 14745735 - 14745833
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||  ||||  |||||||||  |||||||||||||||||||    
T  14745735 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataa--ctcacacttgcaaaccaac 14745832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 41283543 - 41283641
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||| |  |||||||||  |||||||||||||||||||    
T  41283543 cttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatatgggacatataa--ctcacacttgcaaaccaac 41283640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 7598684 - 7598600
Alignment:
Q  16 ttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 102  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||  |||||||||  |||||||||||| ||||||||    
T  7598684 ttatgggtcctcttacttataaggtgttcaacctttacttttttatctgatgtgggacatataa--ctcacacttgcacaccaacac 7598600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 5542693 - 5542792
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||  ||| |  |||||||||  |||||||||||||||||||    
T  5542693 cttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattttattcgatatgggacatataa--ctcacacttgcaaaccaac 5542790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 37106014 - 37105911
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||  |||||  |||||||||  |||||||||||||||| ||    
T  37106014 cttaaggcaatgagtttatgggtccccttacttataaggtgttcaacctttactattttattcgatgtgggacatataa--ctcacacttgcaaacccac 37105917  T
Q  101 acaaat 106  Q
    | ||||    
T  37105916 aaaaat 37105911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 15511563 - 15511644
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||| | ||| |||||||||||||    
T  15511563 cttaagacaatgggtttatgggtcctcttacttataacgtgttcaacctttactcttttatccgttgtgtgacatataactc 15511644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 36178337 - 36178435
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||||||||| |||||||  ||| |||||||||||||||||| ||||||||||||||||| || ||  |||||||||  |||||||||||||||||||    
T  36178337 cttaagacaatgggtttatgagtccccttacttataaggtgttccacctttactattttatccgaagtgggacatataa--ctcacacttgcaaaccaac 36178434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 42514739 - 42514658
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| | ||| |||||||| |||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||    
T  42514739 cttaaggcgatgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatctgatgtaggacatataactc 42514658  T

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Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 962688 - 962607
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||| |||||||| |||||| ||||||||||||||||||||||||| || |||| |||||  ||||||||||||    
T  962688 cttaagacaatgggtttatgggtcctctcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactc 962607  T

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Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 15880353 - 15880272
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||   |||||||||||    
T  15880353 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtggaacatataactc 15880272  T

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Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 1769969 - 1769884
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 101  Q
    |||||||  ||||||||||||||||||||||||| |||||| ||||||| ||||| ||||||||||  |||||||||||| |||||||    
T  1769969 gtttatgagtcctcttacttataaggtgttcaacttttactcttttatccgatgtgtgacatataa--ctcacacttgcacaccaaca 1769884  T

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Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 40733594 - 40733526
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| ||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||    
T  40733594 gtttatgggtcctcttacttataaggtgttcaacatttacttttttatctgatgtgggacatataactc 40733526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 31899496 - 31899575
Alignment:
Q  3 taagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||| |||||||||||||| |||||   |||||||||||    
T  31899496 taaggcaatgagtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactc 31899575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 6421468 - 6421394
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||| |||||||  |||||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  6421468 caatgagtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactc 6421394  T

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Target: chr2; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 33731738 - 33731648
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttg 91  Q
    |||||| ||||  |||||||| ||||||||||||||||||| |||||||||||| ||||||| |||||  || ||||||||| ||||||||    
T  33731738 cttaaggcaataggtttatggatcctcttacttataaggtgctcaacctttactcttttatccgatgtgagatatataactcacacacttg 33731648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 6713053 - 6712985
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| ||||||||||||||||||||||||| |||||| ||||||| |||||  ||||||||||||    
T  6713053 gtttatgggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgagacatataactc 6712985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 12529097 - 12529177
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||| ||||| |||||||  |||||||||||||| ||||||||| ||||||| |||||| ||||||| ||||||||||||    
T  12529097 ttaaggcaatgagtttatgagtcctcttacttatacggtgttcaatctttactgttttatttgatgtaggacatataactc 12529177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 38796701 - 38796769
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| |||||||||||||||||||||||||||||| | ||||||| |||||  ||||||||||||    
T  38796701 gtttatgggtcctcttacttataaggtgttcaacctttattgttttatcagatgtgggacatataactc 38796769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 36178239 - 36178306
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||||| ||||| |||||||| | | |||||||||||||||||||||||||||||||||||| |||||    
T  36178239 cttaaggcaatgggtttatgggttcccttacttataaggtgttcaacctttactattttatccgatgt 36178306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 14745362 - 14745461
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaac 100  Q
    |||||| ||||| |||||||| ||||| |||||| ||| ||||||||| ||||||||||||  |||||  |||||||||  |||||| ||||||||||||    
T  14745362 cttaaggcaatgggtttatgggtcctcatacttacaagatgttcaaccattactattttattcgatgtgggacatataa--ctcacagttgcaaaccaac 14745459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 28254305 - 28254383
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 79  Q
    |||||| ||||| |||||||| |||||||||||||||| ||||||||||||||| || |||| |||||  |||||||||    
T  28254305 cttaaggcaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgggacatataa 28254383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16542539 - 16542458
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| ||||||   |||||||| ||||||||||||||||||||||||||||||| |||||  ||| ||||||||    
T  16542539 cttaaggcaatgagtttataagtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacttataactc 16542458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 28531382 - 28531463
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| ||||||||  |||||||||||||||||||||||||||| || || |||| |||||  ||||||||||||    
T  28531382 cttaaggcaatgagtttatgggacctcttacttataaggtgttcaacctttgcttttctatccgatgtgggacatataactc 28531463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 37632678 - 37632746
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||| |||||||||||||||  |||  |||||||||||||||||| |||||| ||||||||||||    
T  37632678 gtttatgggtcctcttacttataaaatgtcaaacctttactattttatccgatgtaggacatataactc 37632746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 38796299 - 38796367
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| | ||||||||||||||||||||||||| |||||| ||||||| |||||  ||||||||||||    
T  38796299 gtttataggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgggacatataactc 38796367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6422200 - 6422133
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    |||||| | ||| |||||||| |||||||| |||||| |||||||||||||||| |||||||||||||    
T  6422200 cttaaggctatgggtttatgggtcctcttaattataatgtgttcaacctttacttttttatctgatgt 6422133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 35580792 - 35580872
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| ||||||||| ||||| |||||||||||||||||| |||| | ||||||| |||||  ||||||||||||    
T  35580792 cttaaggcaatgggtttatggt-cctctcacttataaggtgttcaacatttattgttttatccgatgtgggacatataactc 35580872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36005948 - 36006001
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttact 54  Q
    |||||| ||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  36005948 cttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacttttact 36006001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 36785664 - 36785712
Alignment:
Q  34 ataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  36785664 ataaggtgttcaacctttactattttatccgatgtgggacatataactc 36785712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 28254181 - 28254247
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    ||||| ||| |||||||||  ||||||||||||||| |||||||||||||||| || |||| |||||    
T  28254181 ttaaggcaaagtgtttatgagtcctcttacttataaagtgttcaacctttacttttctatccgatgt 28254247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 40163466 - 40163520
Alignment:
Q  26 tcttacttataaggtgttcaacctttactattttatctgatgtatgacatataac 80  Q
    ||||||||||||||||||||||||||||| || |||| |||||  ||||||||||    
T  40163466 tcttacttataaggtgttcaacctttacttttctatccgatgtgggacatataac 40163520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 31259697 - 31259750
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatg 67  Q
    |||||||| || |||||||||||||||||| |||||||||| ||||||| ||||    
T  31259697 gtttatgggtcatcttacttataaggtgttgaacctttactcttttatccgatg 31259750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 33561519 - 33561600
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||| |||||||| |||||| |||||||| ||||| |||||  ||| || ||||||||||   |||||||||||    
T  33561519 cttaagacaatgagtttatgggtcctctcacttataaagtgtttaacctccacttttctatctgatgtggaacatataactc 33561600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 40679697 - 40679778
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| | ||| |||||||| | |||||||||||||||||||||||| ||||| || |||| ||| |  ||||||||||||    
T  40679697 cttaaggcgatgggtttatgggttctcttacttataaggtgttcaacccttacttttctatccgatatgggacatataactc 40679778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 5367536 - 5367484
Alignment:
Q  10 atgtgtttatggttcctcttacttataaggtgttcaacctttactattttatc 62  Q
    ||||||| |||| || |||||||||||||||||||||||||| || |||||||    
T  5367536 atgtgttcatggatcatcttacttataaggtgttcaacctttgctcttttatc 5367484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31468818 - 31468895
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| ||||||||    |||| | ||||||||||||||||||||| |||||  ||||||||||||    
T  31468818 cttaaggcaatgagtttatgggtcctctta----taagatattcaacctttactattttatccgatgtgggacatataactc 31468895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 29676971 - 29676912
Alignment:
Q  23 tcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| || ||||||||||| |||||||||| ||||||| |||||  ||||||||||||    
T  29676971 tcctctcacctataaggtgttaaacctttactcttttatccgatgtgggacatataactc 29676912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7598318 - 7598240
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 79  Q
    |||||| | ||| |||||||| |||||||| |||||||||||| |||||||||| || |||  ||||||  ||||||||    
T  7598318 cttaaggctatgagtttatgggtcctcttatttataaggtgttgaacctttacttttctattcgatgtagaacatataa 7598240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 29676618 - 29676544
Alignment:
Q  8 caatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||| |||||||| | |||| |||||||| |||||||| ||||||| |||||||  ||||  ||||||||||||    
T  29676618 caatgagtttatgggttctctcacttataatgtgttcaatctttactcttttatccaatgtgagacatataactc 29676544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 40733950 - 40733892
Alignment:
Q  24 cctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||||||||||||| || ||||||| ||||||  |||||  ||||||||||||    
T  40733950 cctcttacttataaggtgttaaatctttactcttttattcgatgtgggacatataactc 40733892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 9231322 - 9231258
Alignment:
Q  18 atggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||| |||||||| ||||||  ||||||||||||||| || |||||||| |  ||||||||||||    
T  9231322 atggatcctcttatttataatatgttcaacctttacttttctatctgatatgagacatataactc 9231258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 5485 - 5405
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  5485 ttaagacaatatgtttatgggccctcttacttataaggtgttcaacctttactattttatccgatgtaggacatataactc 5405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 5867 - 5786
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  5867 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgcgacatataactc 5786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 224 - 309
Alignment:
Q  14 gtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  |||||||||||||||||||||    
T  224 gtttatggt-cctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaaccaacac 309  T

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Target: scaffold0702; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 582 - 663
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||| | |||||  ||||||||||||    
T  582 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatataactc 663  T

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Target: scaffold0171 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 17524 - 17605
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| | ||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  17524 cttaaggctatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtgtgacatataactc 17605  T

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Target: scaffold0504 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 10191 - 10260
Alignment:
Q  13 tgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    ||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||  ||||||||||||    
T  10191 tgtttatgggtcctcttacttataaggtgttcaacttttaccattttatccgatgtgagacatataactc 10260  T

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Target: scaffold0078 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 5447 - 5366
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||||| || |||| |||||   |||||||||||    
T  5447 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactgttctatccgatgtggaacatataactc 5366  T

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Target: scaffold0027 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 47449 - 47383
Alignment:
Q  2 ttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgt 68  Q
    ||||| ||||| |||||||| | |||||||||||||||||||||| ||||||||||||||| |||||    
T  47449 ttaaggcaatgggtttatggattctcttacttataaggtgttcaaactttactattttatcggatgt 47383  T

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Target: scaffold0391 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1174 - 1255
Alignment:
Q  1 cttaagacaatgtgtttatggttcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 82  Q
    |||||| ||||| |||||||  |||| || |||||||||||||||||||||||| |||||||  ||||  ||||||||||||    
T  1174 cttaaggcaatgggtttatgagtcctttttcttataaggtgttcaacctttactcttttatccaatgtgggacatataactc 1255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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