View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0122_low_14 (Length: 252)

Name: NF0122_low_14
Description: NF0122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0122_low_14
NF0122_low_14
[»] chr3 (57 HSPs)
chr3 (1-125)||(39935018-39935142)
chr3 (1-106)||(39389062-39389165)
chr3 (1-107)||(22304560-22304664)
chr3 (1-87)||(43346854-43346940)
chr3 (1-86)||(29644965-29645050)
chr3 (1-98)||(32589704-32589798)
chr3 (1-87)||(29644644-29644730)
chr3 (1-87)||(35946531-35946617)
chr3 (1-87)||(42342451-42342537)
chr3 (1-86)||(12114625-12114710)
chr3 (1-107)||(4823646-4823750)
chr3 (4-87)||(33803318-33803401)
chr3 (20-106)||(50612534-50612618)
chr3 (1-87)||(37990702-37990788)
chr3 (1-87)||(37991040-37991126)
chr3 (13-106)||(51886553-51886644)
chr3 (1-73)||(41359828-41359900)
chr3 (19-87)||(54017897-54017965)
chr3 (1-87)||(15772863-15772949)
chr3 (1-87)||(52634685-52634770)
chr3 (11-87)||(25755403-25755479)
chr3 (23-106)||(37726496-37726577)
chr3 (19-87)||(39914261-39914329)
chr3 (19-87)||(54018279-54018347)
chr3 (1-87)||(3135136-3135222)
chr3 (1-87)||(21832406-21832492)
chr3 (13-87)||(25739500-25739574)
chr3 (21-87)||(33175747-33175813)
chr3 (1-67)||(44160607-44160673)
chr3 (1-86)||(42584885-42584970)
chr3 (7-87)||(49336756-49336836)
chr3 (4-87)||(7767380-7767463)
chr3 (41-107)||(22304237-22304301)
chr3 (4-87)||(53577373-53577456)
chr3 (1-67)||(33362356-33362422)
chr3 (22-87)||(31190026-31190091)
chr3 (1-66)||(45395716-45395781)
chr3 (1-87)||(22304018-22304097)
chr3 (1-56)||(1634377-1634432)
chr3 (1-87)||(32462963-32463050)
chr3 (1-87)||(8327913-8327999)
chr3 (1-87)||(15773201-15773287)
chr3 (1-73)||(42342153-42342225)
chr3 (1-56)||(45901754-45901809)
chr3 (29-87)||(11661544-11661602)
chr3 (1-67)||(11661980-11662046)
chr3 (197-245)||(39935213-39935258)
chr3 (19-107)||(3384347-3384433)
chr3 (20-87)||(9240158-9240225)
chr3 (1-56)||(32462621-32462676)
chr3 (40-87)||(43346659-43346706)
chr3 (28-87)||(53118064-53118123)
chr3 (1-87)||(3135517-3135610)
chr3 (1-38)||(22303722-22303759)
chr3 (1-54)||(39336292-39336345)
chr3 (1-54)||(46546388-46546441)
chr3 (1-46)||(52634990-52635035)
[»] chr1 (55 HSPs)
chr1 (1-104)||(32594779-32594880)
chr1 (1-107)||(44290888-44290992)
chr1 (1-107)||(44290521-44290625)
chr1 (1-106)||(3550712-3550815)
chr1 (19-107)||(3537228-3537314)
chr1 (1-111)||(41759470-41759578)
chr1 (1-87)||(34364934-34365020)
chr1 (2-87)||(41184489-41184574)
chr1 (4-87)||(29798208-29798291)
chr1 (1-107)||(48588551-48588655)
chr1 (1-87)||(17294586-17294672)
chr1 (1-87)||(41142381-41142467)
chr1 (1-87)||(41157384-41157470)
chr1 (1-86)||(3537662-3537747)
chr1 (1-86)||(3875394-3875479)
chr1 (1-87)||(26661585-26661671)
chr1 (1-87)||(34364516-34364602)
chr1 (1-87)||(40082416-40082501)
chr1 (1-87)||(50052086-50052172)
chr1 (1-87)||(22077558-22077644)
chr1 (1-67)||(41157020-41157086)
chr1 (1-86)||(5528817-5528902)
chr1 (1-87)||(14318876-14318962)
chr1 (1-71)||(26661961-26662031)
chr1 (21-87)||(45084391-45084457)
chr1 (1-62)||(44043835-44043896)
chr1 (1-107)||(45494037-45494146)
chr1 (1-87)||(9955916-9956004)
chr1 (1-73)||(31767224-31767296)
chr1 (1-73)||(39066263-39066335)
chr1 (1-87)||(37556120-37556206)
chr1 (1-87)||(66535-66621)
chr1 (1-87)||(5320028-5320114)
chr1 (1-59)||(22077173-22077231)
chr1 (1-87)||(24600377-24600463)
chr1 (2-87)||(24132049-24132134)
chr1 (2-87)||(37850664-37850749)
chr1 (1-84)||(30630701-30630784)
chr1 (1-87)||(11977289-11977375)
chr1 (1-87)||(34649447-34649533)
chr1 (1-87)||(38804418-38804504)
chr1 (1-73)||(66150-66223)
chr1 (20-84)||(5575116-5575180)
chr1 (19-87)||(22077909-22077977)
chr1 (19-86)||(21378122-21378189)
chr1 (13-59)||(4956228-4956274)
chr1 (2-87)||(44685465-44685551)
chr1 (37-87)||(50469180-50469230)
chr1 (26-87)||(37555739-37555800)
chr1 (20-81)||(44091909-44091970)
chr1 (31-87)||(4266875-4266931)
chr1 (28-87)||(30630912-30630972)
chr1 (14-73)||(10351183-10351242)
chr1 (2-47)||(41184152-41184197)
chr1 (1-41)||(35154066-35154106)
[»] chr6 (40 HSPs)
chr6 (1-106)||(3409251-3409354)
chr6 (1-107)||(2378117-2378221)
chr6 (1-107)||(29518911-29519015)
chr6 (1-106)||(29518495-29518598)
chr6 (1-106)||(32741171-32741274)
chr6 (1-106)||(35210196-35210299)
chr6 (1-108)||(3415448-3415553)
chr6 (1-106)||(3058218-3058321)
chr6 (1-106)||(14748401-14748504)
chr6 (1-106)||(26544041-26544144)
chr6 (13-107)||(3409651-3409743)
chr6 (1-87)||(2377763-2377849)
chr6 (1-87)||(32460643-32460729)
chr6 (6-87)||(9062417-9062498)
chr6 (1-87)||(10911574-10911661)
chr6 (1-106)||(1127352-1127455)
chr6 (5-87)||(16108072-16108154)
chr6 (1-87)||(16454916-16455002)
chr6 (1-105)||(1846741-1846843)
chr6 (1-73)||(10074426-10074498)
chr6 (1-87)||(2579935-2580021)
chr6 (1-87)||(5958666-5958752)
chr6 (1-87)||(6999859-6999945)
chr6 (1-87)||(10074054-10074140)
chr6 (1-87)||(16107687-16107773)
chr6 (1-87)||(16454584-16454670)
chr6 (1-87)||(2843563-2843650)
chr6 (1-87)||(593772-593858)
chr6 (1-67)||(2578506-2578572)
chr6 (20-86)||(5832108-5832174)
chr6 (20-87)||(1950267-1950334)
chr6 (1-87)||(2579555-2579641)
chr6 (1-59)||(10073679-10073737)
chr6 (23-73)||(35210501-35210551)
chr6 (19-59)||(14789285-14789325)
chr6 (1-73)||(2975575-2975647)
chr6 (1-72)||(2578898-2578968)
chr6 (36-86)||(2579203-2579253)
chr6 (1-54)||(12092545-12092598)
chr6 (1-54)||(34661672-34661725)
[»] chr8 (60 HSPs)
chr8 (1-107)||(3669678-3669782)
chr8 (19-106)||(1014326-1014411)
chr8 (1-72)||(45122648-45122719)
chr8 (1-87)||(25561879-25561965)
chr8 (1-87)||(34835218-34835304)
chr8 (1-87)||(45122120-45122206)
chr8 (1-106)||(20870636-20870741)
chr8 (1-87)||(3038353-3038439)
chr8 (1-106)||(3670052-3670155)
chr8 (1-67)||(9483250-9483316)
chr8 (1-87)||(33113430-33113516)
chr8 (24-87)||(18372785-18372848)
chr8 (1-107)||(30441072-30441180)
chr8 (1-87)||(40518591-40518677)
chr8 (19-106)||(41416252-41416335)
chr8 (8-107)||(1013941-1014038)
chr8 (1-84)||(5420663-5420746)
chr8 (4-87)||(9309364-9309447)
chr8 (1-87)||(70337-70423)
chr8 (1-87)||(147460-147546)
chr8 (1-87)||(30359280-30359366)
chr8 (1-87)||(34834885-34834971)
chr8 (1-67)||(34835504-34835570)
chr8 (1-67)||(34835770-34835836)
chr8 (1-67)||(40579569-40579635)
chr8 (1-87)||(43274842-43274928)
chr8 (1-87)||(45121973-45122059)
chr8 (1-66)||(18372057-18372122)
chr8 (19-87)||(30359618-30359686)
chr8 (6-73)||(3037776-3037843)
chr8 (24-87)||(18372342-18372405)
chr8 (1-87)||(1513978-1514064)
chr8 (1-87)||(8918827-8918913)
chr8 (13-87)||(9482679-9482753)
chr8 (1-87)||(9308986-9309074)
chr8 (1-73)||(6876925-6876997)
chr8 (13-84)||(18373006-18373077)
chr8 (23-86)||(25561729-25561792)
chr8 (20-87)||(37544572-37544639)
chr8 (1-87)||(45123015-45123099)
chr8 (1-87)||(9608754-9608840)
chr8 (1-67)||(32305506-32305572)
chr8 (13-87)||(41972167-41972241)
chr8 (1-73)||(9609108-9609180)
chr8 (4-60)||(18373236-18373292)
chr8 (1-64)||(40518103-40518166)
chr8 (1-87)||(8794120-8794206)
chr8 (1-59)||(9507819-9507877)
chr8 (13-67)||(18372678-18372731)
chr8 (1-87)||(18380080-18380166)
chr8 (19-73)||(45121737-45121791)
chr8 (1-87)||(18371724-18371805)
chr8 (7-87)||(4154350-4154429)
chr8 (1-87)||(9620739-9620825)
chr8 (47-107)||(6731895-6731953)
chr8 (13-111)||(4154741-4154836)
chr8 (1-52)||(33832022-33832073)
chr8 (1-87)||(32640595-32640676)
chr8 (47-87)||(6651512-6651552)
chr8 (19-83)||(20130462-20130525)
[»] chr7 (47 HSPs)
chr7 (1-107)||(14681501-14681605)
chr7 (1-107)||(37533073-37533177)
chr7 (1-86)||(6054570-6054655)
chr7 (1-87)||(1085679-1085765)
chr7 (1-87)||(7517589-7517675)
chr7 (1-104)||(29157559-29157660)
chr7 (1-87)||(7554034-7554120)
chr7 (1-87)||(11845200-11845286)
chr7 (1-87)||(22566725-22566811)
chr7 (1-73)||(22567102-22567174)
chr7 (1-87)||(23440-23526)
chr7 (1-87)||(16569205-16569291)
chr7 (1-87)||(16596371-16596457)
chr7 (1-87)||(19122741-19122826)
chr7 (1-87)||(30244279-30244365)
chr7 (1-87)||(30245086-30245172)
chr7 (1-87)||(34218097-34218183)
chr7 (1-87)||(37533427-37533513)
chr7 (1-87)||(40094837-40094923)
chr7 (1-86)||(45434646-45434731)
chr7 (1-87)||(24177444-24177530)
chr7 (1-87)||(36939796-36939882)
chr7 (1-87)||(47129104-47129190)
chr7 (1-86)||(40230354-40230439)
chr7 (23-87)||(30245503-30245567)
chr7 (1-86)||(24838764-24838850)
chr7 (1-87)||(41910657-41910743)
chr7 (1-87)||(45754725-45754810)
chr7 (1-86)||(118364-118449)
chr7 (8-87)||(28301613-28301692)
chr7 (1-84)||(36534847-36534930)
chr7 (1-67)||(1085311-1085377)
chr7 (1-87)||(9901654-9901738)
chr7 (23-85)||(30255350-30255412)
chr7 (1-87)||(36622969-36623055)
chr7 (1-87)||(43241504-43241590)
chr7 (1-73)||(45433264-45433336)
chr7 (28-87)||(36109007-36109066)
chr7 (1-87)||(8128504-8128590)
chr7 (1-87)||(41854644-41854729)
chr7 (26-87)||(30244710-30244771)
chr7 (1-54)||(30253534-30253587)
chr7 (1-92)||(30032571-30032662)
chr7 (1-87)||(20599323-20599409)
chr7 (1-98)||(37345916-37346013)
chr7 (46-87)||(40094502-40094543)
chr7 (19-83)||(44361545-44361608)
[»] chr4 (69 HSPs)
chr4 (1-107)||(50630816-50630920)
chr4 (1-106)||(55933185-55933288)
chr4 (1-106)||(49880152-49880255)
chr4 (1-87)||(52884896-52884982)
chr4 (1-87)||(54017656-54017742)
chr4 (1-73)||(54936219-54936291)
chr4 (1-87)||(25483345-25483431)
chr4 (1-106)||(41370349-41370452)
chr4 (1-101)||(50002423-50002521)
chr4 (1-73)||(45496828-45496900)
chr4 (1-84)||(22028022-22028105)
chr4 (6-73)||(54108936-54109003)
chr4 (1-84)||(54741239-54741322)
chr4 (1-87)||(1731708-1731794)
chr4 (1-87)||(2741080-2741166)
chr4 (1-87)||(3244512-3244598)
chr4 (1-87)||(4955378-4955464)
chr4 (1-87)||(39404407-39404493)
chr4 (1-87)||(41707525-41707611)
chr4 (1-87)||(52884704-52884790)
chr4 (1-74)||(18932810-18932883)
chr4 (1-73)||(44621025-44621097)
chr4 (1-73)||(54017763-54017835)
chr4 (1-87)||(3340816-3340902)
chr4 (1-87)||(34646710-34646796)
chr4 (1-87)||(36608722-36608808)
chr4 (1-87)||(36629246-36629332)
chr4 (2-87)||(49076510-49076595)
chr4 (1-87)||(49302913-49303001)
chr4 (25-86)||(54343086-54343147)
chr4 (1-89)||(44620360-44620448)
chr4 (1-87)||(2740709-2740795)
chr4 (1-87)||(6975517-6975603)
chr4 (1-87)||(16888877-16888963)
chr4 (1-84)||(22028430-22028515)
chr4 (1-87)||(32941184-32941270)
chr4 (1-87)||(36572028-36572114)
chr4 (1-87)||(39792921-39793007)
chr4 (1-87)||(50459730-50459816)
chr4 (1-87)||(51768121-51768207)
chr4 (19-87)||(43174515-43174584)
chr4 (1-73)||(4390162-4390234)
chr4 (19-87)||(20826226-20826294)
chr4 (19-87)||(44620669-44620737)
chr4 (20-67)||(54108565-54108612)
chr4 (1-87)||(10245929-10246014)
chr4 (1-87)||(22183325-22183411)
chr4 (1-87)||(34004646-34004730)
chr4 (1-87)||(39404027-39404113)
chr4 (30-87)||(44620305-44620362)
chr4 (27-87)||(3700374-3700434)
chr4 (19-87)||(20825845-20825913)
chr4 (21-87)||(3341137-3341203)
chr4 (19-85)||(10246358-10246424)
chr4 (22-87)||(11348410-11348475)
chr4 (1-45)||(31691203-31691247)
chr4 (1-65)||(49076892-49076955)
chr4 (44-106)||(50788087-50788147)
chr4 (30-84)||(45489421-45489475)
chr4 (30-87)||(44621435-44621492)
chr4 (19-87)||(16889615-16889683)
chr4 (30-73)||(44620968-44621011)
chr4 (2-56)||(43827480-43827534)
chr4 (1-67)||(48111759-48111825)
chr4 (1-94)||(760191-760284)
chr4 (1-73)||(3271807-3271882)
chr4 (1-54)||(15841429-15841482)
chr4 (1-54)||(34544148-34544201)
chr4 (1-54)||(41603252-41603305)
[»] chr2 (54 HSPs)
chr2 (1-107)||(36178668-36178772)
chr2 (1-107)||(37106179-37106283)
chr2 (1-106)||(14745730-14745833)
chr2 (1-106)||(41283538-41283641)
chr2 (1-107)||(5542688-5542792)
chr2 (1-107)||(5543061-5543165)
chr2 (1-106)||(36178332-36178435)
chr2 (21-107)||(7598600-7598684)
chr2 (1-111)||(37105911-37106019)
chr2 (1-87)||(962607-962693)
chr2 (1-87)||(15511558-15511644)
chr2 (1-87)||(15880272-15880358)
chr2 (1-87)||(42514658-42514744)
chr2 (1-87)||(6421394-6421480)
chr2 (19-106)||(1769884-1769969)
chr2 (19-87)||(40733526-40733594)
chr2 (1-107)||(14745357-14745461)
chr2 (1-84)||(28254300-28254383)
chr2 (8-87)||(31899496-31899575)
chr2 (1-96)||(33731648-33731743)
chr2 (1-87)||(6712985-6713071)
chr2 (1-87)||(12529091-12529177)
chr2 (1-87)||(38796683-38796769)
chr2 (1-73)||(6422133-6422205)
chr2 (1-73)||(36178234-36178306)
chr2 (1-87)||(16542458-16542544)
chr2 (1-87)||(28531377-28531463)
chr2 (1-59)||(36005943-36006001)
chr2 (19-87)||(37632678-37632746)
chr2 (19-87)||(38796299-38796367)
chr2 (1-87)||(33561514-33561600)
chr2 (1-87)||(35580787-35580872)
chr2 (1-87)||(31468813-31468895)
chr2 (1-84)||(7598240-7598323)
chr2 (2-73)||(28254176-28254247)
chr2 (23-85)||(40163458-40163520)
chr2 (1-87)||(40679692-40679778)
chr2 (19-72)||(31259697-31259750)
chr2 (1-87)||(16590897-16590978)
chr2 (1-85)||(29874086-29874170)
chr2 (39-87)||(36785664-36785712)
chr2 (1-67)||(5367484-5367550)
chr2 (13-87)||(29676544-29676618)
chr2 (1-54)||(31385779-31385832)
chr2 (5-87)||(29676912-29676999)
chr2 (1-59)||(23346274-23346331)
chr2 (1-43)||(36784323-36784365)
chr2 (1-87)||(37895124-37895210)
chr2 (29-87)||(40733892-40733950)
chr2 (1-54)||(30323506-30323559)
chr2 (1-98)||(41678431-41678527)
chr2 (23-87)||(9231258-9231322)
chr2 (1-73)||(29873600-29873672)
chr2 (19-87)||(33953852-33953920)
[»] chr5 (50 HSPs)
chr5 (1-87)||(18603183-18603269)
chr5 (1-108)||(9498717-9498822)
chr5 (1-106)||(32487386-32487488)
chr5 (1-107)||(6500814-6500917)
chr5 (1-106)||(6500443-6500545)
chr5 (1-87)||(41170643-41170729)
chr5 (1-84)||(26075225-26075308)
chr5 (1-87)||(11417040-11417126)
chr5 (1-106)||(27502099-27502202)
chr5 (1-87)||(40296378-40296464)
chr5 (1-101)||(36492280-36492378)
chr5 (1-73)||(3295407-3295479)
chr5 (1-98)||(3295078-3295172)
chr5 (1-87)||(299498-299584)
chr5 (1-87)||(6224205-6224291)
chr5 (1-87)||(13415823-13415909)
chr5 (1-87)||(25327944-25328030)
chr5 (1-87)||(26074209-26074295)
chr5 (1-87)||(26074621-26074707)
chr5 (1-101)||(29549318-29549416)
chr5 (1-107)||(624187-624291)
chr5 (21-111)||(7768837-7768925)
chr5 (1-87)||(26074845-26074931)
chr5 (1-87)||(35150016-35150101)
chr5 (20-87)||(15370108-15370175)
chr5 (19-86)||(41632792-41632859)
chr5 (1-106)||(5723854-5723957)
chr5 (1-87)||(12662715-12662801)
chr5 (1-87)||(42405659-42405745)
chr5 (19-87)||(26074327-26074395)
chr5 (1-84)||(33747783-33747866)
chr5 (1-106)||(623810-623913)
chr5 (1-59)||(15370439-15370497)
chr5 (1-87)||(36568630-36568716)
chr5 (1-86)||(34753088-34753173)
chr5 (20-73)||(35167920-35167973)
chr5 (7-72)||(41635260-41635325)
chr5 (19-87)||(1028598-1028666)
chr5 (30-85)||(300970-301025)
chr5 (20-87)||(35914858-35914925)
chr5 (1-92)||(38427552-38427642)
chr5 (1-59)||(26590973-26591031)
chr5 (1-73)||(42508635-42508707)
chr5 (1-87)||(24489269-24489353)
chr5 (1-87)||(2411016-2411102)
chr5 (1-82)||(19275543-19275623)
chr5 (36-87)||(6225053-6225104)
chr5 (1-87)||(31509632-31509718)
chr5 (1-87)||(36521959-36522045)
chr5 (26-87)||(39309693-39309754)
[»] scaffold0734 (2 HSPs)
scaffold0734 (1-87)||(5405-5491)
scaffold0734 (6-87)||(5786-5867)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-87)||(17519-17605)
[»] scaffold0702 (2 HSPs)
scaffold0702 (26-107)||(230-309)
scaffold0702 (1-87)||(577-663)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-87)||(5366-5452)
[»] scaffold0504 (1 HSPs)
scaffold0504 (18-87)||(10191-10260)
[»] scaffold0391 (2 HSPs)
scaffold0391 (1-87)||(1169-1255)
scaffold0391 (1-49)||(1754-1802)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-73)||(47383-47455)


Alignment Details
Target: chr3 (Bit Score: 97; Significance: 9e-48; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 39935018 - 39935142
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||| ||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||    
T  39935018 aaaactttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactcttttatccgatgtaggacatataactctcacacttgcaaa 39935117  T
Q  101 ccaacacaaatccataaccacgtcc 125  Q
    |||||||||||||||||||||||||    
T  39935118 ccaacacaaatccataaccacgtcc 39935142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 39389165 - 39389062
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||| |||||| |||||||||  ||||||||||||||    
T  39389165 aaaaccttaagacaatgggtttatgggtcctcttagttttaaggtgttcaacctttactattttatccgatgtaggacatataa--ctcacacttgcaaa 39389068  T
Q  101 ccaaca 106  Q
    ||||||    
T  39389067 ccaaca 39389062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 22304664 - 22304560
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||   ||||||||||||||    
T  22304664 aaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtattcaacctttactattttatccgatgtgggacatata--gctcacacttgcaaa 22304567  T
Q  101 ccaacac 107  Q
    |||||||    
T  22304566 ccaacac 22304560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 43346854 - 43346940
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  43346854 aaaaccttaaggcaatgagtttatgggttctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactc 43346940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29644965 - 29645050
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 86  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||| |||||  |||||||||||    
T  29644965 aaaaccttaagacaatgggtttatgggtcctcttacttataaggtgtttaacctttactcttttatccgatgtgggacatataact 29645050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 32589798 - 32589704
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgca 98  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||  ||||||||   ||||||||||||    
T  32589798 aaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttattattttatcttatgtgggacatata---ctcacacttgca 32589704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 29644644 - 29644730
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||| ||| |||||  ||||||||||||    
T  29644644 aaaaccttaagacaatgggtttatgggttctcttacttataaggtgttcaacctttactctttaatccgatgtgggacatataactc 29644730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 35946617 - 35946531
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  35946617 aaaaccttaaggcaacgggtttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactc 35946531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 42342451 - 42342537
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||| ||||||| |||||  ||||||||||||    
T  42342451 aaaaccttaagacaatggatttatgggtcctcttacttataaggtgttgaacctttactcttttatcggatgtgggacatataactc 42342537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 12114625 - 12114710
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 86  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||| |||||  || ||||||||    
T  12114625 aaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgggatatataact 12114710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 4823750 - 4823646
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    |||| |||||| ||||| |||||||||||||| ||||||||||||||| ||| |||||||||||||| |||||  ||| |||||  ||||||||||||||    
T  4823750 aaaatcttaaggcaatgagtttatgggtcctcctacttataaggtgtttaacttttactattttatccgatgtgagacttataa--ctcacacttgcaaa 4823653  T
Q  101 ccaacac 107  Q
    |||||||    
T  4823652 ccaacac 4823646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 33803318 - 33803401
Alignment:
Q  4 accttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||  ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||  ||||||||||||    
T  33803318 accttaatgcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattttatccgatgtgggacatataactc 33803401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 50612534 - 50612618
Alignment:
Q  20 tttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 106  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||| |||||  |||||||||  ||||||||||||||||||||    
T  50612534 tttatgagtcctcttacttataaggtgttcaatctttactattttatccgatgtgggacatataa--ctcacacttgcaaaccaaca 50612618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 37990702 - 37990788
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||| |||||||||||||||||||||||||| |||||||||||||| |||||   |||||||||||    
T  37990702 aaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactc 37990788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 37991040 - 37991126
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| | ||| |||||| ||||||||||||||||||||||||||||||||||||||||||  ||||  ||||||||||||    
T  37991040 aaaaccttaaggcgatgagtttataggtcctcttacttataaggtgttcaacctttactattttatccaatgtgagacatataactc 37991126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 51886644 - 51886553
Alignment:
Q  13 caatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 106  Q
    ||||| ||||||||||||||||||||||| | ||||||||||||||||||||||  |||||  |||||||||  ||||||||||||||||||||    
T  51886644 caatgagtttatgggtcctcttacttatatgatgttcaacctttactattttattcgatgtgagacatataa--ctcacacttgcaaaccaaca 51886553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41359828 - 41359900
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||| |||| |||||    
T  41359828 aaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactattgtatccgatgt 41359900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 54017897 - 54017965
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  54017897 gtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtaggacatataactc 54017965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 15772949 - 15772863
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||| ||| |  ||||||||||||    
T  15772949 aaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacatttactcttttatccgatatgggacatataactc 15772863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 52634770 - 52634685
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||| |||||  ||||||||||||    
T  52634770 aaaaccttaaggcaatgggtttatgggtc-tcttacttataaggcgttcaacctttactgttttatccgatgtgggacatataactc 52634685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 25755479 - 25755403
Alignment:
Q  11 gacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||  |||||| ||||||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||    
T  25755479 gacaatggatttatgagtcctcttacttataaggtattcaacctttactcttttatctgatgtgagacatataactc 25755403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 37726577 - 37726496
Alignment:
Q  23 atgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 106  Q
    |||| |||||||||||||||||| |||||| |||||||||||||| |||||  |||||||||  ||||||||||||||||||||    
T  37726577 atggatcctcttacttataaggtattcaacatttactattttatccgatgtgagacatataa--ctcacacttgcaaaccaaca 37726496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 39914329 - 39914261
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||| |||||||||||||||||| |||| |||||||||||||  ||||||||||||    
T  39914329 gtttatgggtcctcttatttataaggtgttcaacctctactgttttatctgatgtgagacatataactc 39914261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 54018279 - 54018347
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||| |||| | ||||||||||||    
T  54018279 gtttatgggtcctcttacttataaggtgttcaatctttactcttttatccgatgcaggacatataactc 54018347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 3135136 - 3135222
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||| | || || |||||||||| || |||||||||||||||||||| |||||||||||||| |||||  ||||||||||||    
T  3135136 aaaaccttatggcagtgggtttatgggttcttttacttataaggtgttcaacatttactattttatccgatgtgggacatataactc 3135222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 21832406 - 21832492
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| | ||| ||||||| ||||||||||||||||||||||||||||||||| || ||||  ||||  ||||||||||||    
T  21832406 aaaaccttaaggctatgagtttatgagtcctcttacttataaggtgttcaacctttacttttctatccaatgtgggacatataactc 21832492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 25739500 - 25739574
Alignment:
Q  13 caatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||| ||||||||||||||||||||||| | |||||||| |||||||||||||| |||||  ||||||||||||    
T  25739500 caatgagtttatgggtcctcttacttatatgatgttcaacttttactattttatccgatgtgggacatataactc 25739574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 33175747 - 33175813
Alignment:
Q  21 ttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||||  ||||||||||||    
T  33175747 ttatgggttctcttacttataaggtgttcaacctttacttttctatctgatgtgagacatataactc 33175813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 44160607 - 44160673
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatc 67  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| | |||||||    
T  44160607 aaaaccttaagacaatgggtttatggatcctcttatttataaggtgttcaacctttattgttttatc 44160673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 42584885 - 42584970
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 86  Q
    |||| |||||||||||  |||||||| |||||||||||||||||||||||| ||||||| || |||| |||||  |||||||||||    
T  42584885 aaaatcttaagacaattggtttatggatcctcttacttataaggtgttcaatctttactcttctatccgatgtgggacatataact 42584970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 49336756 - 49336836
Alignment:
Q  7 ttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||| ||| |||||||||||||||||||||||||||| |||||||||||| || |||| |||||  ||||| ||||||    
T  49336756 ttaagactatgggtttatgggtcctcttacttataaggtggtcaacctttacttttctatccgatgtgagacatgtaactc 49336836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 7767380 - 7767463
Alignment:
Q  4 accttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||||| ||||||| ||||||||| |||||| |||| ||||||||||| || |||| |||||  ||||||||||||    
T  7767380 accttaagacaatgggtttatgagtcctcttagttataaagtgtccaacctttacttttctatccgatgtgggacatataactc 7767463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 22304301 - 22304237
Alignment:
Q  41 aaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 107  Q
    ||||||||||||||||||||||||||| |||||  |||||||||  |||||||||||||||||||||    
T  22304301 aaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaaccaacac 22304237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 53577456 - 53577373
Alignment:
Q  4 accttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||| |||| ||||||||| ||| |||| || |||| ||||||||||||||| ||||||| ||||| |||||||||||||    
T  53577456 accttaaggcaatatgtttatggatccacttatttttaagatgttcaacctttactgttttatccgatgtgtgacatataactc 53577373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33362356 - 33362422
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatc 67  Q
    |||| ||||||  |||| ||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  33362356 aaaatcttaaggaaatgggtttatgggtcctcttacttataaggtattcaacctttattattttatc 33362422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 31190091 - 31190026
Alignment:
Q  22 tatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||| |||||  ||||||| ||||    
T  31190091 tatgggtcctctaacttataaggtgttcaacctttactcttttatccgatgtgggacatatcactc 31190026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 45395716 - 45395781
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttat 66  Q
    ||||| ||||||||||| |||||||| ||||||||||||||| ||||| |||||||||| ||||||    
T  45395716 aaaacattaagacaatgggtttatggatcctcttacttataacgtgtttaacctttactcttttat 45395781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 22304018 - 22304097
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| |||||||||||| ||||||||||||       |||||||||||||||||||||||  ||||||||||||    
T  22304018 aaaaccttaaggcaatgggtttatgggtccgcttacttataag-------acctttactattttatctgatgtgggacatataactc 22304097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1634377 - 1634432
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaaccttt 56  Q
    ||||||||||| ||||| |||||||||||||||||||||||| ||||| |||||||    
T  1634377 aaaaccttaagccaatgggtttatgggtcctcttacttataatgtgtttaaccttt 1634432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 32462963 - 32463050
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacc-tttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||| ||| ||||||||||||||| ||||||| |||||| || |||| |||||  ||||||||||||    
T  32462963 aaaaccttaaggcaatgggtttatgagtcttcttacttataaggtattcaaccttttactcttctatccgatgtgggacatataactc 32463050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 8327999 - 8327913
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| || |  |||||||||| |||||||||||||| | |||| |||||||| ||||||| |||||  ||||||||||||    
T  8327999 aaaaccttaaggcattacgtttatgggttctcttacttataagatattcatcctttactcttttatccgatgtgggacatataactc 8327913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 15773287 - 15773201
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||| ||||| ||||| | ||||| ||||||||||||||||| |||||||| |||||| ||||||  |||||  ||||||||||||    
T  15773287 aaaactttaaggcaatgagcttatgagtcctcttacttataagatgttcaacttttactcttttattcgatgtgggacatataactc 15773201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42342153 - 42342225
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||  || ||| |||||| ||||||| |||||    
T  42342153 aaaaccttaaggcaatgagtttatgagtcctcttacttataaggcattgaacatttactcttttatccgatgt 42342225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 45901809 - 45901754
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaaccttt 56  Q
    ||||| ||||| | ||| ||||||| ||||||||||||||||||||||||||||||    
T  45901809 aaaactttaaggccatgagtttatgcgtcctcttacttataaggtgttcaaccttt 45901754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 11661602 - 11661544
Alignment:
Q  29 cctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||| |||| |||| ||||||||||||| |||||  ||||||||||||    
T  11661602 cctcttacttataagatgtttaaccgttactattttatccgatgtgggacatataactc 11661544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11662046 - 11661980
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatc 67  Q
    ||||||||||| ||||  ||||||| | ||||| |||| |||||||||||||||||||| |||||||    
T  11662046 aaaaccttaaggcaattggtttatgaggcctctcacttttaaggtgttcaacctttactcttttatc 11661980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 39935213 - 39935258
Alignment:
Q  197 ctgaatcatatcttcccctctctcattaataaagttgcgagaataatct 245  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  39935213 ctgaatcatatcttcccctctctcat---taaagttgcgagaataatct 39935258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 3384347 - 3384433
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 107  Q
    |||||||||||||||| ||||||| ||||| ||||| |||| |||||||  ||||  |||||||||  ||||| |||||| ||||||||    
T  3384347 gtttatgggtcctcttccttataaagtgtttaacctatactgttttatcatatgtgggacatataa--ctcacgcttgcacaccaacac 3384433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 9240225 - 9240158
Alignment:
Q  20 tttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||||||||||||||||| | ||||||  | |||| |||||   |||||||||||    
T  9240225 tttatgggtcctcttacttataaggtgttcagcttttacttctctatccgatgtggaacatataactc 9240158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32462621 - 32462676
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaaccttt 56  Q
    ||||||||||  ||||  |||||||| || ||||||||||||||||||||||||||    
T  32462621 aaaaccttaaagcaataggtttatggatcatcttacttataaggtgttcaaccttt 32462676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 43346706 - 43346659
Alignment:
Q  40 taaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||||||||||||||||||| |||||  |||||| |||||    
T  43346706 taaggtgttcaacctttactattttatccgatgtgggacatacaactc 43346659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 53118064 - 53118123
Alignment:
Q  28 tcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||| ||||||||||||||||||||||||| ||||||| ||| |   |||||||||||    
T  53118064 tcctctcacttataaggtgttcaacctttactcttttatccgatatggaacatataactc 53118123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 3135517 - 3135610
Alignment:
Q  1 aaaaccttaagacaatgtgtttat--gggtcctcttac-----ttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||  ||||||||||||     | |||||||||||||| |||||| |||||||||| ||  ||||||||||||    
T  3135517 aaaaccttaaggcaatgggtttatgggggtcctcttactaatataataaggtgttcaacttttactcttttatctgaggtgggacatataactc 3135610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 22303722 - 22303759
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttactt 38  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  22303722 aaaaccttaaggcaatgggtttatgggtcctcttactt 22303759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39336292 - 39336345
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacct 54  Q
    ||||||||||  ||||| |||||||| |||||| |||||||| |||||||||||    
T  39336292 aaaaccttaaagcaatgagtttatggatcctctcacttataaagtgttcaacct 39336345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 46546388 - 46546441
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacct 54  Q
    ||||||||||| ||||| |||||||| | |||| |||||||| |||||||||||    
T  46546388 aaaaccttaaggcaatgggtttatggattctctaacttataaagtgttcaacct 46546441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 52635035 - 52634990
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtg 46  Q
    |||| |||||| ||||| ||||||||||||||||| ||||||||||    
T  52635035 aaaatcttaaggcaatgagtttatgggtcctcttatttataaggtg 52634990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 32594779 - 32594880
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  32594779 aaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtaggacatataa--ctcacacttgcaaa 32594876  T
Q  101 ccaa 104  Q
    ||||    
T  32594877 ccaa 32594880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 44290888 - 44290992
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||    
T  44290888 aaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaa 44290985  T
Q  101 ccaacac 107  Q
    |||||||    
T  44290986 ccaacac 44290992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 44290521 - 44290625
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||    
T  44290521 aaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaa 44290618  T
Q  101 ccaacac 107  Q
    |||||||    
T  44290619 ccaacac 44290625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 3550815 - 3550712
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||| ||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||  ||||||||||| ||    
T  3550815 aaaactttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataa--ctcacacttgccaa 3550718  T
Q  101 ccaaca 106  Q
    ||||||    
T  3550717 ccaaca 3550712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 3537228 - 3537314
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  |||||||||||||||||||||    
T  3537228 gtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaaccaacac 3537314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 41759578 - 41759470
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| |||||  ||||||| || |||||||||||||||||||||| |||||||||||||| ||||| ||||||||||  ||||||||||||||    
T  41759578 aaaaccttaaggcaatggatttatggatcatcttacttataaggtgttcaacttttactattttatccgatgtgtgacatataa--ctcacacttgcaaa 41759481  T
Q  101 ccaacacaaat 111  Q
    |||||| ||||    
T  41759480 ccaacaaaaat 41759470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 34365020 - 34364934
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  34365020 aaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacctttattattttatccgatgtgtgacatataactc 34364934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 41184489 - 41184574
Alignment:
Q  2 aaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||  ||||||||||||    
T  41184489 aaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgagacatataactc 41184574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 29798291 - 29798208
Alignment:
Q  4 accttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  29798291 accttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatccaatgtaggacatataactc 29798208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 48588551 - 48588655
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| |||||  |||| ||||| ||||||||||||||||||||||||||||||||||||| |||||  |||||| ||  ||||||||||||||    
T  48588551 aaaaccttaaggcaatgaatttacgggtcttcttacttataaggtgttcaacctttactattttatccgatgtcggacatagaa--ctcacacttgcaaa 48588648  T
Q  101 ccaacac 107  Q
    |||||||    
T  48588649 ccaacac 48588655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 17294672 - 17294586
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||| ||||||| |||||  ||||||||||||    
T  17294672 aaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatccgatgtgggacatataactc 17294586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 41142467 - 41142381
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  41142467 aaaaccttaaggcaatgggtttatgggtccttttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactc 41142381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 41157470 - 41157384
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||    
T  41157470 aaaacctaaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttactcttttatctgatgtgggacatataactc 41157384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3537662 - 3537747
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 86  Q
    ||||||||||| ||||| |||||| |||||||||||| ||||||||||||||||||||||||||||| |||||  |||||||||||    
T  3537662 aaaaccttaagccaatgggtttataggtcctcttactcataaggtgttcaacctttactattttatccgatgtgggacatataact 3537747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3875394 - 3875479
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 86  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||| ||||||||||||    
T  3875394 aaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtacaacctttacttttttatccgatgtgtgacatataact 3875479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26661585 - 26661671
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| | |||||  ||||||||||||    
T  26661585 aaaaccttaaggcaatgagtttatgggtcctctcacttataaggtgttcaacctttactcttttacccgatgtgggacatataactc 26661671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 34364602 - 34364516
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| | ||| ||||| || |||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  34364602 aaaaccttaaggctatgggtttacggatcctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactc 34364516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 40082501 - 40082416
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| |||||  ||||||  |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  40082501 aaaaccttaaggcaatgaatttatga-tcctcttacttataaggtgttcaacctttactattttatccgatgtaggacatataactc 40082416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 50052086 - 50052172
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||| |||||| |||  ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||    
T  50052086 aaaactttaagaaaataggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactc 50052172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 22077558 - 22077644
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| | | | ||||||||||||||||||||||||||||||||||||||||| || |||| |||||  ||||||||||||    
T  22077558 aaaaccttaaggctacgagtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataactc 22077644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 41157086 - 41157020
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatc 67  Q
    ||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41157086 aaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatc 41157020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 5528817 - 5528902
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 86  Q
    |||||||||||| |||| ||||||| ||||||||| ||||||| ||||||||||||||| ||||||| |||||  |||||||||||    
T  5528817 aaaaccttaagaaaatgagtttatgagtcctcttatttataagatgttcaacctttactcttttatccgatgtgagacatataact 5528902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 14318962 - 14318876
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||   |||||||||| ||||||||||||||||||||||||||||||||||||| || ||   |||||||||||    
T  14318962 aaaaccttaaggcaatagatttatgggtcttcttacttataaggtgttcaacctttactattttatccgacgtggaacatataactc 14318876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26661961 - 26662031
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgat 71  Q
    ||||||||||| ||||  ||||||||||| ||| ||||||||||||||||||||||||| |||||||||||    
T  26661961 aaaaccttaaggcaatcggtttatgggtcttctcacttataaggtgttcaacctttactcttttatctgat 26662031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 45084457 - 45084391
Alignment:
Q  21 ttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||  || |||||||||    
T  45084457 ttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggagatataactc 45084391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44043835 - 44043896
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactatt 62  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||    
T  44043835 aaaatcttaagacaatgggtttatgggtcatcttacttataaggtgttcaacatttactatt 44043896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 45494037 - 45494146
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataa----ggtgttcaacctttactattttatctgatgtatgacatataactctcacacttg 96  Q
    ||||| ||||| ||||| |||||||| || |||||||||||     ||||||||||||||||||||||||| |||||  |||||||||  ||||||||||    
T  45494037 aaaactttaaggcaatgggtttatggatcatcttacttatatatatggtgttcaacctttactattttatccgatgtgggacatataa-actcacacttg 45494135  T
Q  97 caaaccaacac 107  Q
    |||||||||||    
T  45494136 caaaccaacac 45494146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 9956004 - 9955916
Alignment:
Q  1 aaaaccttaagacaatgtgttta-tgggtcctcttacttataaggtgttcaacctttac-tattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||  ||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||  ||||||||||||    
T  9956004 aaaaccttaaggcaattggtttaatgggtcctcttacttataatgtgttcaacctttactttttttatctgatgtgggacatataactc 9955916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 31767224 - 31767296
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||||||||| || |  ||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  31767224 aaaaccttaaggcattaggttaatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgt 31767296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39066263 - 39066335
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    |||||||||||||||||  |||||||||| ||||| ||||||||||||||||||||||| || |||| |||||    
T  39066263 aaaaccttaagacaatgattttatgggtcatcttagttataaggtgttcaacctttacttttctatccgatgt 39066335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 37556206 - 37556120
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttacta-ttttatctgatgtatgacatataactc 87  Q
    ||||||||||| | ||| |||||||| |||||||||||||||| |||||||||||||||| ||||||| |||||  ||||||||||||    
T  37556206 aaaaccttaaggctatgggtttatgg-tcctcttacttataagatgttcaacctttactatttttatccgatgtgggacatataactc 37556120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 66535 - 66621
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| | || ||||||||| |||||||||||||||||||||||||||||||| || |||| ||| |   |||||||||||    
T  66535 aaaaccttaaggccatatgtttatggatcctcttacttataaggtgttcaacctttacttttctatccgatatggaacatataactc 66621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 5320028 - 5320114
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| | ||| ||||||||||||||| |||||||||||||||||| |||||| || |||| |||||   |||||||||||    
T  5320028 aaaaccttaaggctatgagtttatgggtcctctcacttataaggtgttcaacttttacttttctatccgatgtggaacatataactc 5320114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 22077173 - 22077231
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttact 59  Q
    ||||||||| | ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  22077173 aaaaccttagggcaatgagtttatgggtcctcttacttataaggtattcaacctttact 22077231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24600377 - 24600463
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||| ||||||| || |||||||||||||  ||||||||||||||| || |||| ||| |  ||||||||||||    
T  24600377 aaaaccttaagacaatgagtttatgagttctcttacttataatatgttcaacctttacttttctatccgatatgggacatataactc 24600463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 24132049 - 24132134
Alignment:
Q  2 aaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||| ||||| |||||||| ||| |||| ||||||||||||||||||||||| || |||| ||||   ||||||||||||    
T  24132049 aaaccttaaggcaatgagtttatggatccccttatttataaggtgttcaacctttacttttctatccgatgagggacatataactc 24132134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 37850664 - 37850749
Alignment:
Q  2 aaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||| ||| |  |||||||||| ||||||||||||||||||||||||| |||| ||||||  |||||  ||||||||||||    
T  37850664 aaaccttaaaacattaggtttatgggttctcttacttataaggtgttcaacctctactgttttatgcgatgtgggacatataactc 37850749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 30630701 - 30630784
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 84  Q
    ||||| ||||| |||||||||||||||| ||||||||||||| ||||  |||||||| | ||||||| |||||  |||||||||    
T  30630701 aaaactttaaggcaatgtgtttatgggttctcttacttataaagtgtcaaacctttaattttttatccgatgtgagacatataa 30630784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 11977375 - 11977289
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| || |  ||||||| || ||||||||||||||||||||||| |||||| ||||| | |||||  ||||||||||||    
T  11977375 aaaaccttaaggcattaggtttatgagtgctcttacttataaggtgttcaacatttactgttttacccgatgtgggacatataactc 11977289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 34649533 - 34649447
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| || |  |||||||||| ||   ||||||||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  34649533 aaaaccttaaggcattaggtttatgggttcttgcacttataaggtgttcaacctttactcttttatccgatgtgggacatataactc 34649447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 38804418 - 38804504
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||   ||| |||||||| ||||||||||||||| |||||||||||||||| ||||||  |||||  ||| ||||||||    
T  38804418 aaaaccttaaggttatgggtttatggatcctcttacttataatgtgttcaacctttactcttttattcgatgtgggacgtataactc 38804504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 66150 - 66223
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttc-aacctttactattttatctgatgt 73  Q
    ||||||||||| | ||  ||||||||||||||||||||||||||||||| |||||||||| || |||| |||||    
T  66150 aaaaccttaaggccataggtttatgggtcctcttacttataaggtgttcaaacctttacttttctatccgatgt 66223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 5575180 - 5575116
Alignment:
Q  20 tttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 84  Q
    ||||| |||||||||||||||||||||||||||||||||| || |||| || ||  |||||||||    
T  5575180 tttataggtcctcttacttataaggtgttcaacctttactcttctatccgacgtgggacatataa 5575116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 22077909 - 22077977
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||||||||||| ||||||||||||| | || |||| ||| ||  |||||||||||    
T  22077909 gtttatgggtcctcttacttataagatgttcaacctttatttttctatccgatttaaaacatataactc 22077977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 21378122 - 21378189
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 86  Q
    ||||||||||||||||||||||||| | ||||||||||||| || |||| ||| |  |||||||||||    
T  21378122 gtttatgggtcctcttacttataagatattcaacctttactgttctatccgatctgggacatataact 21378189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 4956274 - 4956228
Alignment:
Q  13 caatgtgtttatgggtcctcttacttataaggtgttcaacctttact 59  Q
    ||||| |||||||| |||||||||||||||| |||||||||||||||    
T  4956274 caatgagtttatggatcctcttacttataagatgttcaacctttact 4956228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 44685551 - 44685465
Alignment:
Q  2 aaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttc-aacctttactattttatctgatgtatgacatataactc 87  Q
    |||| ||||| ||||| |||||| |||||||||||||||||||| ||| |||||||||| || |||| ||| |  ||||||||||||    
T  44685551 aaacattaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactc 44685465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 50469180 - 50469230
Alignment:
Q  37 ttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||| |||||||||||||||| | |||||||||||| ||||||||||||    
T  50469180 ttataaagtgttcaacctttactttattatctgatgtaggacatataactc 50469230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 37555800 - 37555739
Alignment:
Q  26 ggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||| || ||||||||| ||||||||||| |||||  ||| ||||||||    
T  37555800 ggtcctcttacttataatgtattcaaccttcactattttatccgatgtgggacttataactc 37555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 44091970 - 44091909
Alignment:
Q  20 tttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacata 81  Q
    ||||||||| |||| |||||||| |||||||||||||||| ||  ||||||||| |||||||    
T  44091970 tttatgggttctctcacttataaagtgttcaacctttacttttacatctgatgtgtgacata 44091909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 4266875 - 4266931
Alignment:
Q  31 tcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||| ||| ||||||||| |||||| |||||||| ||||| ||||||||||||    
T  4266875 tcttacttctaatgtgttcaacatttactcttttatctaatgtaggacatataactc 4266931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 30630912 - 30630972
Alignment:
Q  28 tcctcttacttataaggtgttcaaccttt-actattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||||||||| ||||| | | ||||||| |||||| ||||||||||||    
T  30630912 tcctcttacttataaggtgttcagcctttaatttttttatccgatgtaagacatataactc 30630972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 10351242 - 10351183
Alignment:
Q  14 aatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||||||||||||| |||| |||||||| ||||||||||| || | || ||||||||||    
T  10351242 aatgtgtttatgggttctctcacttataaagtgttcaacctctatttttctatctgatgt 10351183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 41184152 - 41184197
Alignment:
Q  2 aaaccttaagacaatgtgtttatgggtcctcttacttataaggtgt 47  Q
    |||||||||| ||||| |||||||| ||||||||||||||| ||||    
T  41184152 aaaccttaaggcaatgggtttatggatcctcttacttataaagtgt 41184197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35154066 - 35154106
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttata 41  Q
    ||||||||||||||||  ||||||||| |||||||||||||    
T  35154066 aaaaccttaagacaatcagtttatgggccctcttacttata 35154106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 5e-37; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 3409354 - 3409251
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||  ||||||||||||||    
T  3409354 aaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataa--ctcacacttgcaaa 3409257  T
Q  101 ccaaca 106  Q
    ||||||    
T  3409256 ccaaca 3409251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 2378221 - 2378117
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    |||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||    
T  2378221 aaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaa 2378124  T
Q  101 ccaacac 107  Q
    |||||||    
T  2378123 ccaacac 2378117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29519015 - 29518911
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    |||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||    
T  29519015 aaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaa 29518918  T
Q  101 ccaacac 107  Q
    |||||||    
T  29518917 ccaacac 29518911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 29518598 - 29518495
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    |||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||    
T  29518598 aaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaa 29518501  T
Q  101 ccaaca 106  Q
    ||||||    
T  29518500 ccaaca 29518495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 32741274 - 32741171
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    |||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||    
T  32741274 aaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaa 32741177  T
Q  101 ccaaca 106  Q
    ||||||    
T  32741176 ccaaca 32741171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 35210299 - 35210196
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||    
T  35210299 aaaaccttaaggcaatggttttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataa--ctcacacttgcaaa 35210202  T
Q  101 ccaaca 106  Q
    ||||||    
T  35210201 ccaaca 35210196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 3415553 - 3415448
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||  |||||||| |||||    
T  3415553 aaaaccttaaggcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattttatgtgatgtgggacatataa--ctcacactcgcaaa 3415456  T
Q  101 ccaacaca 108  Q
    ||||||||    
T  3415455 ccaacaca 3415448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 3058321 - 3058218
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||  |||||||||  || |||||||||||    
T  3058321 aaaaccttaaggcaatgggtttatggatcctcatacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctaacacttgcaaa 3058224  T
Q  101 ccaaca 106  Q
    ||||||    
T  3058223 ccaaca 3058218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 14748401 - 14748504
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||  ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||    
T  14748401 aaaaccttaacgcaatgagtttatgggtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaa 14748498  T
Q  101 ccaaca 106  Q
     |||||    
T  14748499 tcaaca 14748504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 26544144 - 26544041
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| |  || |||||||||||||||||||||||| |||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||    
T  26544144 aaaaccttaaggcggtgggtttatgggtcctcttacttataacgtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaa 26544047  T
Q  101 ccaaca 106  Q
    ||||||    
T  26544046 ccaaca 26544041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 3409743 - 3409651
Alignment:
Q  13 caatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 107  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||   ||||||||  |||||||||||||||||||||    
T  3409743 caatgggtttatgggtcctcttacttataagatgttcaacttttactattttatctgatgtggtacatataa--ctcacacttgcaaaccaacac 3409651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2377849 - 2377763
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||||  ||||||||||||    
T  2377849 aaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatataactc 2377763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 32460643 - 32460729
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||  |||||  ||||||||||||    
T  32460643 aaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatacgatgtgggacatataactc 32460729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 9062417 - 9062498
Alignment:
Q  6 cttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||    
T  9062417 cttaagacaatgagtttatgagtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactc 9062498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 10911661 - 10911574
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttac-tattttatctgatgtatgacatataactc 87  Q
    ||||| ||||| ||||| ||||||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||    
T  10911661 aaaactttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactttttttatctgatgtaggacatataactc 10911574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 1127455 - 1127352
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    |||||||||||  |||| ||||||| ||||||||||||||||||||||||||||||||||||||| | |||||  || ||||||  |||||| |||||||    
T  1127455 aaaaccttaaggtaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttacccgatgtgggatatataa--ctcacagttgcaaa 1127358  T
Q  101 ccaaca 106  Q
    ||||||    
T  1127357 ccaaca 1127352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 16108154 - 16108072
Alignment:
Q  5 ccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||   |||||||||||    
T  16108154 ccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacatttactcttttatctgatgtggaacatataactc 16108072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 16455002 - 16454916
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||  ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||  |||| |||||||    
T  16455002 aaaaccttaaggcaataggtttatgggtcctattacttataaggtgttcaacctttactcttttatctgatgtgggacacataactc 16454916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 1846843 - 1846741
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| |||||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||||  |||||| ||   ||||||||||||     
T  1846843 aaaaccttaaggcaatggatttatgggtgctcttacttataaggtgttcaacctttactattttatccgatgtgagacatagaa--ttcacacttgcaac 1846746  T
Q  101 ccaac 105  Q
    |||||    
T  1846745 ccaac 1846741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10074426 - 10074498
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || |||| |||||    
T  10074426 aaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgt 10074498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2579935 - 2580021
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| |  || |||||||||||||||||||||||| |||||||||||||||| ||||||| |||||  ||||||||||||    
T  2579935 aaaaccttaaggctgtgggtttatgggtcctcttacttataatgtgttcaacctttactcttttatccgatgtgggacatataactc 2580021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 5958666 - 5958752
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||| ||||||||||| ||||||| || |||||| ||||||||||||||||||||||| ||||||| ||||||  |||||||||||    
T  5958666 aaaactttaagacaatgagtttatgagttctcttatttataaggtgttcaacctttactgttttatccgatgtaacacatataactc 5958752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 6999859 - 6999945
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| || || |||||||| ||||||||| ||||||||||||||| |||||| ||||||| |||||| ||||||||||||    
T  6999859 aaaaccttaaggcagtgagtttatggatcctcttacatataaggtgttcaacttttacttttttatccgatgtaggacatataactc 6999945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 10074054 - 10074140
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| || |||| |||||  || |||||||||    
T  10074054 aaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacgtttacttttctatccgatgtgggatatataactc 10074140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 16107773 - 16107687
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||| |||||||||||||||||||||| |||||||||| ||||||| |||||   |||||||||||    
T  16107773 aaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtttaacctttacttttttatccgatgtgacacatataactc 16107687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 16454670 - 16454584
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||||||||| |||| | |||||||||||||  |||| |||||||    
T  16454670 aaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttattcttttatctgatgtgggacacataactc 16454584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2843650 - 2843563
Alignment:
Q  1 aaaaccttaagacaatgtgtttatggg-tcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| |||| ||||||||| |||||   |||||||||||    
T  2843650 aaaaccttaaggcaatgagtttatggggtcctcttacttataaggtgttcaacttttattattttatccgatgtgaaacatataactc 2843563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 593772 - 593858
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| || |  ||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||  |||||| |||||    
T  593772 aaaaccttaaggcagtcggtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatacaactc 593858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2578506 - 2578572
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatc 67  Q
    ||||||||||| | ||| |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  2578506 aaaaccttaaggctatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatc 2578572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 5832108 - 5832174
Alignment:
Q  20 tttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 86  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||  ||||  |||||||||||    
T  5832108 tttatgggtcctcttacttataaggtgttcaacctttactcttttatccaatgtgggacatataact 5832174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 1950267 - 1950334
Alignment:
Q  20 tttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  1950267 tttatggctcctcttacttgtaaggtgttcaacctttactcttttatccgatgtgggacatataactc 1950334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2579555 - 2579641
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||||| ||||||||||||||||| | | ||||||||| |||| || |||||  ||||||||||||    
T  2579555 aaaaccttaaggcaatgagtttatgggccctcttacttataaggtatccgacctttacttttttgtccgatgtgggacatataactc 2579641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10073679 - 10073737
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttact 59  Q
    |||| |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||    
T  10073679 aaaatcttaagccaatgagtttatggatcctcttacttataaggtgttcaacctttact 10073737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 35210551 - 35210501
Alignment:
Q  23 atgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||| |||||    
T  35210551 atgggtcctcttacttacaaggtattcaacctttactattttatccgatgt 35210501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 14789285 - 14789325
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttact 59  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  14789285 gtttatgggtcctcttacttgtaaggtgttcaacctttact 14789325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2975647 - 2975575
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||| ||||||||| |  |||||||||| |||| ||||||||||||||||| |||||| || ||| ||||||    
T  2975647 aaaactttaagacaaaggatttatgggtcatcttgcttataaggtgttcaacatttacttttctatttgatgt 2975575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 2578898 - 2578968
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatg 72  Q
    |||||||||||  |||| |||||||| |||||||| ||||||||| |||||| |||||| ||||||| ||||    
T  2578898 aaaaccttaaggtaatgagtttatggatcctcttatttataaggtattcaacatttact-ttttatccgatg 2578968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 2579203 - 2579253
Alignment:
Q  36 cttataaggtgttcaacctttactattttatctgatgtatgacatataact 86  Q
    ||||||||||||||||| |||||| ||||||| |||||  |||||||||||    
T  2579203 cttataaggtgttcaacttttactcttttatccgatgtgggacatataact 2579253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12092545 - 12092598
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacct 54  Q
    ||||||||||| ||||| |||||||| |||||| |||||||| ||| |||||||    
T  12092545 aaaaccttaaggcaatgagtttatggatcctctcacttataaagtgctcaacct 12092598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34661672 - 34661725
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacct 54  Q
    |||||||||||||||| | | ||||||| ||||||||||||| ||| |||||||    
T  34661672 aaaaccttaagacaatatatgtatgggttctcttacttataaagtgatcaacct 34661725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 3e-35; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 3669782 - 3669678
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||  ||||||||||||||    
T  3669782 aaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataa--ctcacacttgcaaa 3669685  T
Q  101 ccaacac 107  Q
    |||||||    
T  3669684 ccaacac 3669678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 1014326 - 1014411
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 106  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  1014326 gtttacgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa--ctcacacttgcaaaccaaca 1014411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 45122719 - 45122648
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatg 72  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45122719 aaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatg 45122648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 25561879 - 25561965
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||| |||||  ||||||||||||    
T  25561879 aaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacgtttactcttttatccgatgtgggacatataactc 25561965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 34835304 - 34835218
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  34835304 aaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatcggatgtgggacatataactc 34835218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 45122120 - 45122206
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  45122120 aaaaccttaagaaaatgagtttatgggttctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactc 45122206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 20870636 - 20870741
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    |||| |||||| || || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||   ||||||||||||||    
T  20870636 aaaatcttaaggcagtgggtttatgggtcctcttacttataagatgttcaacctttactattttatctgatgtggaacatatataactcacacttgcaaa 20870735  T
Q  101 ccaaca 106  Q
    ||||||    
T  20870736 ccaaca 20870741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 3038353 - 3038439
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||| |||||  ||||||||||||    
T  3038353 aaaaccttaaggcaatgggtttatgggtccttttacttataaagtgttcaacctttactattttatccgatgtgggacatataactc 3038439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 3670155 - 3670052
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    |||||||||||  |||  |||||||||||||| ||||||||||||||| |||||||||||||||||| |||||  |||||||||  ||||||||||||||    
T  3670155 aaaaccttaaggaaataggtttatgggtcctcatacttataaggtgttaaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaa 3670058  T
Q  101 ccaaca 106  Q
    ||||||    
T  3670057 ccaaca 3670052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9483250 - 9483316
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatc 67  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9483250 aaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatc 9483316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 33113430 - 33113516
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||| |||||| ||||| |||||||||||||||||||||||||  |||||||||||||||||||||| |||||| ||||||||||||    
T  33113430 aaaatcttaaggcaatgagtttatgggtcctcttacttataagacgttcaacctttactattttatccgatgtaggacatataactc 33113516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 18372785 - 18372848
Alignment:
Q  24 tgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  18372785 tgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgtgacatataactc 18372848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 30441180 - 30441072
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataa----ggtgttcaacctttactattttatctgatgtatgacatataactctcacacttg 96  Q
    ||||||||||| ||||| ||||||||| ||||||||||||||    ||||||||||||||||||||||| | |||||  |||||||||  ||||||||||    
T  30441180 aaaaccttaaggcaatgggtttatgggccctcttacttataattaaggtgttcaacctttactattttagccgatgtgggacatataa--ctcacacttg 30441083  T
Q  97 caaaccaacac 107  Q
    |||||||||||    
T  30441082 caaaccaacac 30441072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 40518677 - 40518591
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| || || ||||||||||||||||| ||||||||||||||||||||||| || ||||||||||  ||||||||||||    
T  40518677 aaaaccttaagtcattgggtttatgggtcctcttatttataaggtgttcaacctttacttttctatctgatgtgggacatataactc 40518591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 41416252 - 41416335
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 106  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||    ||||||||||||||||    
T  41416252 gtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataact----cacttgcaaaccaaca 41416335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 1013941 - 1014038
Alignment:
Q  8 taagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 107  Q
    |||| ||||| |||||| |||||||||||||||| |||||||||| |||||||||||||| |||||   ||||||||  |||||||||||||||||||||    
T  1013941 taaggcaatgggtttattggtcctcttacttatagggtgttcaacttttactattttatccgatgtggaacatataa--ctcacacttgcaaaccaacac 1014038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 5420746 - 5420663
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 84  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||| |||||||||||||||||| |||| |||||  |||||||||    
T  5420746 aaaaccttaaggcaatgggtttatgagtcctcttacttataagatgttcaacctttactattctatccgatgtgggacatataa 5420663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 9309447 - 9309364
Alignment:
Q  4 accttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||||| |||||| ||||||| |||||  ||||||||||||    
T  9309447 accttaaggcaatgagtttaagggtcctcttacttataaggtgttcaacatttactcttttatccgatgtgggacatataactc 9309364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 70337 - 70423
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| || || ||||||||||||||||||||||||| |||||||| |||||| ||||||| |||||  ||||||||||||    
T  70337 aaaaccttaaggcagtgggtttatgggtcctcttacttataagatgttcaacatttactcttttatccgatgtgggacatataactc 70423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 147546 - 147460
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||| ||||| ||||  ||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  147546 aaaactttaaggcaataggtttatgggtcctcttatttataaggtgttcaacctttactcttttatccgatgtgggacatataactc 147460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 30359366 - 30359280
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| | ||| |||||||||||||||| ||||||||||||||||| |||||| ||||||| |||||  ||||||||||||    
T  30359366 aaaaccttaaggctatgggtttatgggtcctcttgcttataaggtgttcaacatttactcttttatccgatgtgagacatataactc 30359280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 34834971 - 34834885
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||| ||| |||||||||||||||||| ||||||||||||||||||  ||||  ||||||||||||    
T  34834971 aaaaccttaaggcaatgagtttatgagtcatcttacttataaggtgtttaacctttactattttatccaatgtgggacatataactc 34834885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34835570 - 34835504
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatc 67  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34835570 aaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacctttactattttatc 34835504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34835836 - 34835770
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatc 67  Q
    ||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34835836 aaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacctttactattttatc 34835770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 40579569 - 40579635
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatc 67  Q
    ||||||||||  ||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40579569 aaaaccttaaagcaataagtttatgggtcctcttacttataaggtgttcaacctttactattttatc 40579635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 43274842 - 43274928
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||  ||||||||||||||||||||||||  | ||||||||||||| |||||||||||||   |||||||||||    
T  43274842 aaaaccttaagacaataggtttatgggtcctcttacttataatatattcaacctttactcttttatctgatgtgaaacatataactc 43274928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 45121973 - 45122059
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||| |||||| ||||| ||||||| |||||||||||||||| |||||||||||||||||||||||  |||||  ||||||||||||    
T  45121973 aaaatcttaaggcaatgagtttatgagtcctcttacttataaagtgttcaacctttactattttatgcgatgtgggacatataactc 45122059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18372057 - 18372122
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttat 66  Q
    ||||||||||  ||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  18372057 aaaaccttaaagcaatgagtttatggatcctcttacttataaggtgttcaacctttactattttat 18372122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 30359686 - 30359618
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||| |||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||    
T  30359686 gtttatgagtcctcttacttataaggtgttcaacttttactcttttatctgatgtgagacatataactc 30359618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 3037776 - 3037843
Alignment:
Q  6 cttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||| ||| |||||    
T  3037776 cttaagacaatgggtttatgagtcctcttacttataaggtgttcaacatttactatttcatccgatgt 3037843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 18372342 - 18372405
Alignment:
Q  24 tgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  18372342 tgggtcttcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactc 18372405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1513978 - 1514064
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||   ||| ||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||  || |||||||||    
T  1513978 aaaaccttaaggttatgggtttaagggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggatatataactc 1514064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 8918827 - 8918913
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||  |||||||||||||||||||||||| |||||||||||||||| |  ||||||||||  ||||| ||||||    
T  8918827 aaaaccttaagtcaataggtttatgggtcctcttacttataaagtgttcaacctttactctgctatctgatgtgggacatgtaactc 8918913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 9482679 - 9482753
Alignment:
Q  13 caatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||   |||||||||||    
T  9482679 caatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatcccatgtggaacatataactc 9482753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 9309074 - 9308986
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctga--tgtatgacatataactc 87  Q
    |||||||| || ||||| ||||||||||||||||||||||||  |||||||| |||||| ||||||||||  |||| ||||||||||||    
T  9309074 aaaacctttaggcaatgggtttatgggtcctcttacttataacatgttcaacttttactcttttatctgatgtgtaggacatataactc 9308986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6876925 - 6876997
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    |||||| |||||||||| || |||||||| ||||| ||||||||||||||||||||||| ||||||| |||||    
T  6876925 aaaaccctaagacaatgagtgtatgggtcatcttatttataaggtgttcaacctttacttttttatccgatgt 6876997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 18373006 - 18373077
Alignment:
Q  13 caatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 84  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||| || ||  |||||||||    
T  18373006 caatgagtttatgagtcctcttatttataaggtgttcaacctttactattttatccgaagtgggacatataa 18373077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 25561729 - 25561792
Alignment:
Q  23 atgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 86  Q
    |||||| |||||||||||||||||||||||||||||| ||||||| |||||  |||||||||||    
T  25561729 atgggtactcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataact 25561792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 37544572 - 37544639
Alignment:
Q  20 tttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||| |||||  ||| ||||||||    
T  37544572 tttatgggtcctctttcttataatgtgttcaacctttactattttatccgatgtgcgacttataactc 37544639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 45123099 - 45123015
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||| |||  ||||||||||| |||||||||  ||||||| |||||||||||||||||| |||||  ||||||||||||    
T  45123099 aaaaccttaagaaaataggtttatgggtcatcttactta--aggtgtttaacctttactattttatccgatgtgggacatataactc 45123015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 9608840 - 9608754
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||   ||| ||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |  ||||||||||||    
T  9608840 aaaaccttaaggtgatgggtttatgggtcatcttacttataaggtgttcaacctttacttttctatccgatatgggacatataactc 9608754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 32305572 - 32305506
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatc 67  Q
    |||| ||||||  |||| |||||| |||| |||||||||||||||||||||||||||||||||||||    
T  32305572 aaaatcttaaggtaatgggtttataggtcttcttacttataaggtgttcaacctttactattttatc 32305506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 41972241 - 41972167
Alignment:
Q  13 caatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||| ||||||||||||| | ||||||||||||||||||||||||| || |||| |||||  ||||||||||||    
T  41972241 caatgggtttatgggtcctatcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactc 41972167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9609180 - 9609108
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||| ||||| | ||| ||||||||||| ||||||||||||| ||||||||||||||| || ||||||||||    
T  9609180 aaaacattaaggcgatgggtttatgggtcatcttacttataagatgttcaacctttacttttctatctgatgt 9609108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 18373236 - 18373292
Alignment:
Q  4 accttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttacta 60  Q
    |||||||||||||| ||| |||| |||||||| ||||||||||||||||||||||||    
T  18373236 accttaagacaatgggttaatggatcctcttatttataaggtgttcaacctttacta 18373292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40518166 - 40518103
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactatttt 64  Q
    ||||||||||| || || ||||||||||||  ||||||||||||||||||||||||||| ||||    
T  40518166 aaaaccttaaggcattgggtttatgggtccatttacttataaggtgttcaacctttactttttt 40518103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 8794206 - 8794120
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||| | |  ||||||| ||||||||||||||||| |||||||| |||| | ||||||| |||||  ||||||||||||    
T  8794206 aaaaccttaagatattaggtttatgagtcctcttacttataagatgttcaacatttattcttttatccgatgtgagacatataactc 8794120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9507877 - 9507819
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttact 59  Q
    |||||||||||  |||| ||||||| ||||||||||||||||||| |||||||||||||    
T  9507877 aaaaccttaaggtaatgggtttatgagtcctcttacttataaggtattcaacctttact 9507819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 18372678 - 18372731
Alignment:
Q  13 caatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatc 67  Q
    ||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  18372678 caatgggtttatgagtcctcttacttataag-tgttcaacctttactattttatc 18372731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 18380080 - 18380166
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||  | || |||||| || || |||||||||||||||||||||||||||||||||||  |||||  || |||||||||    
T  18380080 aaaaccttaaggtagtgggtttataggcccccttacttataaggtgttcaacctttactattttattcgatgtgggatatataactc 18380166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 45121737 - 45121791
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    |||||||| ||||||||||||||||||| |||||||||||| ||||||| |||||    
T  45121737 gtttatggatcctcttacttataaggtgatcaacctttactcttttatccgatgt 45121791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 18371724 - 18371805
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| || || ||||||||||| |||||||||     ||||||||||||||||||||||| ||||| |||||||||||||    
T  18371724 aaaaccttaaggca-tgggtttatgggtcttcttacttaa----tgttcaacctttactattttatccgatgtgtgacatataactc 18371805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 4154350 - 4154429
Alignment:
Q  7 ttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||| ||||| ||||||||||| ||| |||||||| |||||||||||  ||| || ||||||||||| ||||||||||||    
T  4154350 ttaaggcaatgagtttatgggtc-tctcacttataaagtgttcaacctccacttttctatctgatgtaggacatataactc 4154429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 9620739 - 9620825
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||| |||||| ||||| ||||||||||||||| |||||||| ||| ||||| | |||| || |||||| |||  ||||||||||||    
T  9620739 aaaatcttaaggcaatgagtttatgggtcctctcacttataaagtgatcaacttctacttttctatctgttgtgagacatataactc 9620825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 6731953 - 6731895
Alignment:
Q  47 ttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 107  Q
    ||||||||||||||||||||| |||||  |||||||||  |||||||||||||| ||||||    
T  6731953 ttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaaacaacac 6731895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 4154741 - 4154836
Alignment:
Q  13 caatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacacaaat 111  Q
    ||||| ||||||||||||| | |||||||| |||||||||||  ||| || |||| |||||  |||||||||  |||||||||||| | ||||||||||    
T  4154741 caatgagtttatgggtcctttcacttataaagtgttcaacctccacttttctatcagatgtgggacatataa--ctcacacttgcaca-caacacaaat 4154836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 33832073 - 33832022
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaac 52  Q
    |||||||||| | || |||||||| ||||||||||||||||| |||||||||    
T  33832073 aaaaccttaaaaaaaagtgtttataggtcctcttacttataaagtgttcaac 33832022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 32640595 - 32640676
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| |||||| ||||||||||| ||     ||||||||||||||| ||||||| |||||  |||| |||||||    
T  32640595 aaaaccttaaggcaatgggtttatcggtcctcttaccta-----tgttcaacctttactcttttatccgatgtgagacagataactc 32640676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 6651552 - 6651512
Alignment:
Q  47 ttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||||||| |||||  ||||||||||||    
T  6651552 ttcaacctttactattttatccgatgtgagacatataactc 6651512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 20130525 - 20130462
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatata 83  Q
    |||||||| || ||||||||| |||||||||||| |||||| ||||||| |||||  ||||||||    
T  20130525 gtttatggatcatcttactta-aaggtgttcaacttttactcttttatccgatgtgagacatata 20130462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 7e-33; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 14681605 - 14681501
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||  |||||||||  || |||||||||||    
T  14681605 aaaaccttaagacaatgggtttatgggccctcttacttacaaggtgttcaacctttactattttatctgatgtgggacatataa--cttacacttgcaaa 14681508  T
Q  101 ccaacac 107  Q
    |||||||    
T  14681507 ccaacac 14681501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 37533073 - 37533177
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||  |||||||||  ||||||||||||||    
T  37533073 aaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataa--ctcacacttgcaaa 37533170  T
Q  101 ccaacac 107  Q
    |||||||    
T  37533171 ccaacac 37533177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 6054655 - 6054570
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 86  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||  |||||||||||    
T  6054655 aaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtgagacatataact 6054570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1085679 - 1085765
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||  ||||||||||||    
T  1085679 aaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgggacatataactc 1085765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 7517675 - 7517589
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  7517675 aaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactc 7517589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 29157660 - 29157559
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| |||||  |||||||||| ||||||||||||||||||||||||||||||||||||| | |||  |||||||||  ||||||||||||||    
T  29157660 aaaaccttaaggcaatggatttatgggtcgtcttacttataaggtgttcaacctttactattttatccggtgtgggacatataa--ctcacacttgcaaa 29157563  T
Q  101 ccaa 104  Q
    ||||    
T  29157562 ccaa 29157559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 7554120 - 7554034
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| | ||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  7554120 aaaaccttaaggctatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactc 7554034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 11845286 - 11845200
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||   |||||||||||    
T  11845286 aaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatataactc 11845200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 22566725 - 22566811
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||  ||||||| ||||    
T  22566725 aaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatattactc 22566811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 22567102 - 22567174
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  22567102 aaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgt 22567174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 23440 - 23526
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||| |||| |||||   |||||||||||    
T  23440 aaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattgtatccgatgtggaacatataactc 23526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 16569291 - 16569205
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| || |||| |||||  ||||||||||||    
T  16569291 aaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactc 16569205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 16596371 - 16596457
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| || |||| |||||  ||||||||||||    
T  16596371 aaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactc 16596457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 19122826 - 19122741
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| |||||  |||||| ||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  19122826 aaaaccttaaggcaatggatttatgagtcctcttacttataaggtgttcaacctttactattttatccgatgt-ggacatataactc 19122741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 30244365 - 30244279
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||||  ||||||||||||    
T  30244365 aaaaccttaaggcaatgggtttatgagtcctcttacttataaggtcttcaacctttactcttttatccgatgtgggacatataactc 30244279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 30245172 - 30245086
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||   |||||||||||    
T  30245172 aaaaccttaaggcaatgagtttatgggtcgtcttacttataaggtgttcaacctttactcttttatccgatgtggaacatataactc 30245086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 34218097 - 34218183
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||||||||||| |||||| ||||||| |||||  ||||||||||||    
T  34218097 aaaaccttaagacaatgggtttatgagtcctctcacttataaggtgttcaacatttacttttttatccgatgtgagacatataactc 34218183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 37533427 - 37533513
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||   |||||  |||||||||||    
T  37533427 aaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattttattcaatgtagaacatataactc 37533513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 40094837 - 40094923
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||| ||||||  |||||  ||||||||||||    
T  40094837 aaaaccttaagacgatgggtttatgggtcctcttacttataaggtgttgaacctttactcttttattcgatgtgagacatataactc 40094923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 45434731 - 45434646
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 86  Q
    ||||||||||| || |  ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||  |||||||||||    
T  45434731 aaaaccttaaggcagtaagtttatgggtcctcttacttataaggtgttcaacctttacttttttatccgatgtgggacatataact 45434646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 24177530 - 24177444
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||| ||||| ||||| |||||||||||| ||||||||||||||||||| |||||||| ||||||| |||||  ||||||||||||    
T  24177530 aaaactttaaggcaatgggtttatgggtccgcttacttataaggtgttcagcctttactcttttatccgatgtgggacatataactc 24177444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 36939796 - 36939882
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||||||||| |||||||||||||  ||| |  ||||||||||||    
T  36939796 aaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacttttactattttatacgatttgggacatataactc 36939882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 47129190 - 47129104
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||  | ||| |||||||||||||||||||||||||  |||||||||||||||||||||| |||||  ||||||||||||    
T  47129190 aaaaccttaaagcgatgggtttatgggtcctcttacttataagaggttcaacctttactattttatccgatgtgagacatataactc 47129104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 40230354 - 40230439
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 86  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| |||||||| |||||| ||||||  |||||  |||||||||||    
T  40230354 aaaaccttaagactatgggtttatgggtcctcttacttataagatgttcaacttttacttttttattcgatgtgggacatataact 40230439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 30245567 - 30245503
Alignment:
Q  23 atgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||    
T  30245567 atgggccctcttacttataaggtgttcaacctttactcttttatctgatgtgggacatataactc 30245503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 24838764 - 24838850
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcct-cttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 86  Q
    ||||||||||||||| | |||||||| |||| |||||||||||||||||||||||||||| ||||||  |||||  |||||||||||    
T  24838764 aaaaccttaagacaacgggtttatggatccttcttacttataaggtgttcaacctttactcttttattcgatgtgagacatataact 24838850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 41910657 - 41910743
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||| |||||| ||||| ||||||||||||||| | ||||||||| ||||||||||||| ||||||| |||||  ||||||||||||    
T  41910657 aaaatcttaagccaatgggtttatgggtcctctcagttataaggtattcaacctttactcttttatccgatgtgggacatataactc 41910743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 45754810 - 45754725
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| | ||| ||||||| ||| |||||||||||||||||||||| |||||||||||||| |||||  ||||||||||||    
T  45754810 aaaaccttaaggctatgggtttatgagtcatcttacttataaggtgttcaacatttactattttatccgatgt-ggacatataactc 45754725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 118364 - 118449
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 86  Q
    ||||||||| |  |||| |||||||| ||||||||||||| |||||||||||||||||| || ||||||||||  |||||||||||    
T  118364 aaaaccttacggtaatgggtttatggatcctcttacttattaggtgttcaacctttacttttctatctgatgtgggacatataact 118449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 28301613 - 28301692
Alignment:
Q  8 taagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||| ||||| |||||||||||||||||||||||||||||||| | |||||| || |||| |||||  ||||||||||||    
T  28301613 taaggcaatgggtttatgggtcctcttacttataaggtgttcagcttttacttttctatccgatgtgagacatataactc 28301692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 36534847 - 36534930
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 84  Q
    |||||||||||||  |  |||||||||||||||||||||||||||||||||||| |||| ||||||| || ||  |||||||||    
T  36534847 aaaaccttaagactttaggtttatgggtcctcttacttataaggtgttcaacctctactgttttatccgaggtgggacatataa 36534930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 1085311 - 1085377
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatc 67  Q
    ||||||||||| ||||| |||||||||| ||||||||||| || |||||||| ||||||||||||||    
T  1085311 aaaaccttaaggcaatgagtttatgggttctcttacttatgagttgttcaacttttactattttatc 1085377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 9901738 - 9901654
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||| |||||||| ||||| ||| |||||| ||||||||||||||| ||||||| |||||  ||||||||||||    
T  9901738 aaaaccttaagacaatgagtttatggatcctc-tacgtataagatgttcaacctttactgttttatccgatgt-ggacatataactc 9901654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 30255412 - 30255350
Alignment:
Q  23 atgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataac 85  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||    
T  30255412 atgggccctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataac 30255350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 36623055 - 36622969
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| |||||  ||||||| ||||| |||||||||  |||| |||||||||||||||||| |||||  ||||||||||||    
T  36623055 aaaaccttaaggcaatggatttatggatcctcctacttataaaatgtttaacctttactattttatccgatgtgggacatataactc 36622969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 43241590 - 43241504
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||  ||||||| ||||| ||||||||||||||||||||||||| | ||||||| |||||   |||||||||||    
T  43241590 aaaaccttaagtcaataagtttatgagtccttttacttataaggtgttcaacctttatttttttatccgatgtggaacatataactc 43241504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 45433336 - 45433264
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    |||| |||||| ||||  ||||||| || |||||||||||||||||||||||||||||| ||||||| |||||    
T  45433336 aaaatcttaaggcaataggtttatgagttctcttacttataaggtgttcaacctttactcttttatccgatgt 45433264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 36109007 - 36109066
Alignment:
Q  28 tcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||  || |||||||||    
T  36109007 tcctcttacttataaggtgttcaacctttactcttttatccgatgtgagaaatataactc 36109066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 8128504 - 8128590
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||   ||| |||||||||||||||||| |||||||||||||||||||| | || |||| ||| |  ||||||||||||    
T  8128504 aaaaccttaaggttatgggtttatgggtcctcttacatataaggtgttcaacctttatttttctatccgatatgggacatataactc 8128590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 41854729 - 41854644
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| || | | ||||| |||| |||| |||||||||||||||||||||||| ||||| |||||||  ||||||||||||    
T  41854729 aaaaccttaaggcattatatttataggtcatcttgcttataaggtgttcaacctttactctttta-ctgatgtgggacatataactc 41854644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 30244771 - 30244710
Alignment:
Q  26 ggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||| ||||||||||||||||||||||| |||||||  ||||  ||||||||||||    
T  30244771 ggtcctcttatttataaggtgttcaacctttactcttttatccaatgtgggacatataactc 30244710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30253587 - 30253534
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacct 54  Q
    ||||||||||| ||||| |||||||||| |||||||||||||||| ||||||||    
T  30253587 aaaaccttaaggcaatgagtttatgggttctcttacttataaggtcttcaacct 30253534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 30032662 - 30032571
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcaca 92  Q
    ||||||||||| | ||  |||||||| | |||||||||||||||||||||||  ||||| ||||||  |||||  |||||||||||| ||||    
T  30032662 aaaaccttaaggctataggtttatggatactcttacttataaggtgttcaacacttactcttttattcgatgtgggacatataactcacaca 30032571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 20599409 - 20599323
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||| ||||| ||||| ||||||  ||||||||| |||||| ||||| | |||||||| ||||||| ||| |  ||||||||||||    
T  20599409 aaaacgttaaggcaatgagtttatatgtcctcttatttataaagtgtttatcctttacttttttatccgatatgggacatataactc 20599323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 37346013 - 37345916
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgca 98  Q
    ||||| ||||| |||| |||||||||||| ||| ||||||||  |||| |||||  ||| || |||| ||| |||||||||||   ||||||||||||    
T  37346013 aaaactttaaggcaatatgtttatgggtcttctcacttataaaatgtttaacctccacttttctatcagatatatgacatatataactcacacttgca 37345916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 40094502 - 40094543
Alignment:
Q  46 gttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||||| |||||||||||||  ||||||||||||    
T  40094502 gttcaacctttactcttttatctgatgttggacatataactc 40094543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 44361545 - 44361608
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatata 83  Q
    |||||||| || ||||||||| |||||||||||| |||||| ||||||| |||||  ||||||||    
T  44361545 gtttatggatcatcttactta-aaggtgttcaacttttactcttttatccgatgtgagacatata 44361608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 7e-33; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 50630816 - 50630920
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||  ||||| ||||||||    
T  50630816 aaaaccttaaggcaatgggtttatgggtcctcttacttataatgtgttcaacctttactattttatccgatgtaggacatataa--ctcacgcttgcaaa 50630913  T
Q  101 ccaacac 107  Q
    |||||||    
T  50630914 ccaacac 50630920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 55933185 - 55933288
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||  ||||||||||||||    
T  55933185 aaaactttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacccttactattttatccgatgtaggacatataa--ctcacacttgcaaa 55933282  T
Q  101 ccaaca 106  Q
    ||||||    
T  55933283 ccaaca 55933288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 49880255 - 49880152
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||   ||||  |||||||||  ||||||||||||||    
T  49880255 aaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgttcaacctttactattttattcaatgtgggacatataa--ctcacacttgcaaa 49880158  T
Q  101 ccaaca 106  Q
    ||||||    
T  49880157 ccaaca 49880152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 52884982 - 52884896
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  52884982 aaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactc 52884896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 54017656 - 54017742
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||    
T  54017656 aaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatctgacgtgggacatataactc 54017742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 54936291 - 54936219
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  54936291 aaaaccttaaggcaatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgt 54936219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 25483431 - 25483345
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| |||||||| |||||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||    
T  25483431 aaaaccttaaggcaatgggtttatggatcctcttacttataagatgttcaacctttactattttatccgatgtgagacatataactc 25483345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 41370452 - 41370349
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||| |||||| |||||||||||||| ||| |  |||||||||  ||||||||||||||    
T  41370452 aaaactttaaggcaatgggtttatgggtcctcttacttataaggttttcaacatttactattttatccgatttgggacatataa--ctcacacttgcaaa 41370355  T
Q  101 ccaaca 106  Q
    ||||||    
T  41370354 ccaaca 41370349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 50002521 - 50002423
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    |||||||||||||||||  |||||||||||||||||||| || |||||||||||||||| ||||||| |||||  |||||||||  ||||||||||||||    
T  50002521 aaaaccttaagacaatggatttatgggtcctcttacttaaaaagtgttcaacctttactcttttatccgatgtgagacatataa--ctcacacttgcaaa 50002424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 45496900 - 45496828
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||| |||||    
T  45496900 aaaaccttaagacaatgagtttataggtcctcttacttataaggtgttcaacctttacgattttatccgatgt 45496828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22028022 - 22028105
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 84  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||  |||||||||    
T  22028022 aaaaccttaaggcaatatgtttatgggtcctcttacttataaggtgttcaacctttcgtattttatccgatgtgggacatataa 22028105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 54109003 - 54108936
Alignment:
Q  6 cttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  54109003 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgt 54108936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 54741239 - 54741322
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 84  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| || |||| |||||  |||||||||    
T  54741239 aaaaccttaagacaatctgtgtatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataa 54741322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1731708 - 1731794
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||  ||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||  ||||||||||||    
T  1731708 aaaaccttaaggcaattggtttatgggtcctcttatttataagatgttcaacctttactgttttatctgatgtgggacatataactc 1731794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2741166 - 2741080
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| |||||   ||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||||||||||    
T  2741166 aaaaccttaaggcaatggagttatgggtcctcttacttataaggtattcaacctttactattctatctgatgtgggacatataactc 2741080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 3244512 - 3244598
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| || |||| |||||  ||||||||||||    
T  3244512 aaaactttaagacaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgagacatataactc 3244598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 4955378 - 4955464
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |  ||||||||||||    
T  4955378 aaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaaccttaactattttatccgatatgagacatataactc 4955464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 39404493 - 39404407
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| | ||  ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||  ||||||||||||    
T  39404493 aaaaccttaaggctataggtttatgggtcctcttacttataaggtgttccacctttactcttttatctgatgtgggacatataactc 39404407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 41707525 - 41707611
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||| |||||||||| || ||||||||| ||||||||||||||||| ||||||| |||||  ||||||||||||    
T  41707525 aaaaccttaagacaatgagtttatgggttcttttacttatatggtgttcaacctttactcttttatccgatgtgggacatataactc 41707611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 52884790 - 52884704
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| |||||| | || ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  52884790 aaaaccttaaggcaatgggtttatcgatcatcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactc 52884704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18932810 - 18932883
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgta 74  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  18932810 aaaaccttaaggcaatgggtttatgggtcctcttatttataaggtattcaacctttactattttatccgatgta 18932883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 44621097 - 44621025
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||||| |||||    
T  44621097 aaaaccttaagacaatgagtttatgtgccctcttacttataaggtgttcaacctttactgttttatccgatgt 44621025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 54017763 - 54017835
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  54017763 aaaaccttaagacaatgggaatatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgt 54017835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 3340902 - 3340816
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| || || |||||||||||||||||||||||||||| |||||||||||| ||| ||||||||   ||||||||||||    
T  3340902 aaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgctcaacctttactctttcatctgatgcgggacatataactc 3340816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 34646710 - 34646796
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||| ||||||||| |||||||||||||||| |||||| ||||||| |||||  ||||||||||||    
T  34646710 aaaaccttaaggcaatgagtttatgagtcctcttagttataaggtgttcaacatttactgttttatccgatgtgggacatataactc 34646796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 36608722 - 36608808
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||||||||  ||||||| ||||||||||||| ||||||||||| |||||| ||||||| |||||  ||||||||||||    
T  36608722 aaaaccttaagacaatggatttatggatcctcttacttatgaggtgttcaacttttactcttttatccgatgttggacatataactc 36608808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 36629332 - 36629246
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||| ||| |||||| || |||| |||||  ||||||||||||    
T  36629332 aaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgtttaacttttacttttctatccgatgtgggacatataactc 36629246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 49076510 - 49076595
Alignment:
Q  2 aaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||| ||| |   |||||||||||    
T  49076510 aaactttaagacaatgggtttataggtcctcttacttataaggtgttcaacctttactgttttatccgatatggtacatataactc 49076595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 49303001 - 49302913
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttactt--ataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||||||||||||||||  ||||| ||||||||||||||| |||||| ||||||  ||||||||||||    
T  49303001 aaaaccttaaggcaatgggtttatgggtcctcttacttttataagatgttcaacctttacttttttatttgatgtgggacatataactc 49302913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 54343086 - 54343147
Alignment:
Q  25 gggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 86  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||    
T  54343086 gggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataact 54343147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 44620448 - 44620360
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctc 89  Q
    ||||||||||| ||||| |||||||||  |||||| ||||||||||||||||||||||| ||||||| |||||   |||||||||||||    
T  44620448 aaaaccttaaggcaatgggtttatgggctctcttatttataaggtgttcaacctttactgttttatccgatgtggaacatataactctc 44620360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2740795 - 2740709
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| |  || |||||| |||||||||||||||||||||||||||||||||| || |||| |||||  ||||||||||||    
T  2740795 aaaaccttaaggctctgggtttataggtcctcttacttataaggtgttcaacctttactgttctatccgatgtgggacatataactc 2740709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 6975517 - 6975603
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||| ||||||| ||||  |||||| ||||||||||||||||| | ||||||||||||||||||||| |||||  ||||||||||||    
T  6975517 aaaatcttaagataatggatttatgagtcctcttacttataagatattcaacctttactattttatcggatgtgagacatataactc 6975603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 16888877 - 16888963
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||| |||||||||| |||||| ||| |||||||||||||||| ||||||||||||| || |||| |||||  ||||||||||||    
T  16888877 aaaaccgtaagacaatgagtttataggttctcttacttataaggtattcaacctttacttttctatccgatgtgggacatataactc 16888963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22028430 - 22028515
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaaccttta--ctattttatctgatgtatgacatataa 84  Q
    ||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||   | ||||||| |||||| |||||||||    
T  22028430 aaaacattaagacaatgagtttatgggtcctcttactaataaggtgttcaacctttatttttttttatccgatgtaggacatataa 22028515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 32941184 - 32941270
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||| | ||||||| ||||||||||||||||||||||| || | || |||||| ||||||||||||    
T  32941184 aaaaccttaaggcaatgagtttatgagccctcttatttataaggtgttcaacctttactgttctttccgatgtaagacatataactc 32941270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 36572114 - 36572028
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| |||||  |||||||||| |||||||||||||||||||||| |||||| ||||||  |||||  ||||||||||||    
T  36572114 aaaaccttaaggcaatggatttatgggtcttcttacttataaggtgttcaacatttactcttttattcgatgtgggacatataactc 36572028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 39792921 - 39793007
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||| || ||||||| ||||||||||||||||| |||||| || ||||||||||  ||||||||||||    
T  39792921 aaaaccttaaggcaatgagtttacggttcctctttcttataaggtgttcaacatttacttttctatctgatgtgggacatataactc 39793007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 50459816 - 50459730
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||| |||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| | |||||   |||||||||||    
T  50459816 aaaaccttaagataatgggtttatgagtcctcttacttataagatgttcaacctttactcttttaaccgatgtggaacatataactc 50459730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 51768121 - 51768207
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||||||||| |||||| || |||  ||| || ||||||||||||    
T  51768121 aaaaccttaagacaatgagtttatgagtcctcttatttataaggtgttcaacatttactcttatattcgatataggacatataactc 51768207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 43174584 - 43174515
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttact-attttatctgatgtatgacatataactc 87  Q
    ||||||| |||||||||||||||||||||||||||||||||  ||||||||||||| || ||||||||||    
T  43174584 gtttatgtgtcctcttacttataaggtgttcaacctttactctttttatctgatgtgtggcatataactc 43174515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4390162 - 4390234
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||||||||  ||||||| | | || |||||||||||||||||||||||||||||||| |||||||||||||    
T  4390162 aaaaccttaacgcaatgtgctaaaggatcctcttacttataaggtgttcaacctttactcttttatctgatgt 4390234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 20826294 - 20826226
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||||| |||||  ||||||||||||    
T  20826294 gtttatgggttctcttacttataacgtgttcaacttttactattttatccgatgtgggacatataactc 20826226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 44620737 - 44620669
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||||||||||||||| ||||||||||| |||||||| ||| |||||  ||||||||||||    
T  44620737 gtttatgggtcctcttacttataaagtgttcaacctctactatttcatccgatgtgggacatataactc 44620669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 54108612 - 54108565
Alignment:
Q  20 tttatgggtcctcttacttataaggtgttcaacctttactattttatc 67  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  54108612 tttatgggtccttttacttataaggtgttcaacctttactattttatc 54108565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 10246014 - 10245929
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| |  || |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||  | ||||||||||    
T  10246014 aaaaccttaaggctttgggtttatgg-tcctcttacttataaggtgttcaacctttactcttttatccgatgtggggcatataactc 10245929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 22183325 - 22183411
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||  |||||||| |||||| ||||||| |||||  || |||||||||    
T  22183325 aaaaccttaaggcaatgggtttatgggtccttttacttataaattgttcaacatttactcttttatccgatgtgggatatataactc 22183411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 34004646 - 34004730
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||  |||| ||||||||||||||||||||||||| ||||||||||||| | |||||||  |||| |||||||||||||    
T  34004646 aaaaccttaagg-aatgagtttatgggtcctcttacttataagttgttcaacctttagt-ttttatcatatgtgtgacatataactc 34004730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 39404113 - 39404027
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||  | ||| ||||||| |||||||||||||||| |||||||||||||||| ||||||   ||||| ||||||||||||    
T  39404113 aaaaccttaatgctatgagtttatgagtcctcttacttataaagtgttcaacctttactcttttattcaatgtaggacatataactc 39404027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 44620362 - 44620305
Alignment:
Q  30 ctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||||||||||||||||||||||||  ||||  ||||||||||||    
T  44620362 ctcttacttataaggtgttcaacctttactattttatcccatgtgggacatataactc 44620305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 3700434 - 3700374
Alignment:
Q  27 gtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||| |||||||||||||||||||| |||||| ||||||| |||||| ||||||||||||    
T  3700434 gtccttttacttataaggtgttcaacatttactcttttatccgatgtaggacatataactc 3700374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 20825913 - 20825845
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||||||| |||||   |||||||||||    
T  20825913 gtttatgggtgctcttatttataaggtgttcaacctttactcttttatccgatgtggaacatataactc 20825845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 3341203 - 3341137
Alignment:
Q  21 ttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||||||||||||| ||||| |||||||||| |||||||  ||||  ||||||||||||    
T  3341203 ttatgggtcctcttacttataaagtgtttaacctttactcttttatccaatgtgggacatataactc 3341137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 10246424 - 10246358
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataac 85  Q
    ||||||||||||||| ||||||||| ||||||||||||||| ||||||| ||| |  ||||||||||    
T  10246424 gtttatgggtcctctaacttataagatgttcaacctttactcttttatccgatttgagacatataac 10246358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 11348410 - 11348475
Alignment:
Q  22 tatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||| |||||| |||||||| |||||||||||  ||||||||||||||||||  |||||||||||    
T  11348410 tatggatcctctcacttataaagtgttcaacctccactattttatctgatgtagaacatataactc 11348475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31691247 - 31691203
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggt 45  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||    
T  31691247 aaaaccttaaggcaatgagtttatgggtcctcttacttataaggt 31691203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 49076892 - 49076955
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactatttta 65  Q
    |||||||||||   ||| |||||||||| |||||||| |||||||||||||||||||||||||||    
T  49076892 aaaaccttaaggttatgggtttatgggttctcttact-ataaggtgttcaacctttactatttta 49076955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 50788087 - 50788147
Alignment:
Q  44 gtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 106  Q
    |||||||||||||||||||||||| |||||  |||||||||  || |||||||||||||||||    
T  50788087 gtgttcaacctttactattttatccgatgtgggacatataa--cttacacttgcaaaccaaca 50788147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 45489421 - 45489475
Alignment:
Q  30 ctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 84  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||  |||||||||    
T  45489421 ctcttacttatatggtgttcaacctttactcttttatccgatgtgagacatataa 45489475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 44621492 - 44621435
Alignment:
Q  30 ctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||||| |||||||||| |||||||  ||||  ||||||||||||    
T  44621492 ctcttacttataaggtgtttaacctttactgttttatcccatgttggacatataactc 44621435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 16889615 - 16889683
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||  |||||||||||||||||| ||||||||||||| || |||| ||| |  ||||||||||||    
T  16889615 gtttatgaatcctcttacttataaggtattcaacctttacttttctatccgatttgagacatataactc 16889683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 73
Target Start/End: Complemental strand, 44621011 - 44620968
Alignment:
Q  30 ctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    |||||||||||||||||||||||||||||  ||||||| |||||    
T  44621011 ctcttacttataaggtgttcaacctttacagttttatccgatgt 44620968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 43827534 - 43827480
Alignment:
Q  2 aaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaaccttt 56  Q
    |||||||||| |||||  |||||||||||||||| |||||||| |||||| ||||    
T  43827534 aaaccttaaggcaatgaatttatgggtcctcttatttataaggagttcaatcttt 43827480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 48111759 - 48111825
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatc 67  Q
    |||||||||||  ||||  |||||  ||||| |||||||||| |||||||||||||||| |||||||    
T  48111759 aaaaccttaaggtaatggatttataagtccttttacttataatgtgttcaacctttactcttttatc 48111825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 760284 - 760191
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacact 94  Q
    |||| |||||| ||||| ||||||||||||||| |||||||| ||  |||||||| | | || |||  |||||  |||||||||||| ||||||    
T  760284 aaaatcttaaggcaatgagtttatgggtcctctcacttataaagttctcaaccttcatttttctattcgatgtgggacatataactcacacact 760191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3271882 - 3271807
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttactt---ataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||||||||| ||||  |||||||||| |||||||||   |||||||||| ||| |||||| || ||||||||||    
T  3271882 aaaaccttaaggcaataggtttatgggttctcttacttataataaggtgtttaacttttacttttctatctgatgt 3271807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15841429 - 15841482
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacct 54  Q
    ||||||||||| |||||||||||||  |||||| ||||| || |||||||||||    
T  15841429 aaaaccttaaggcaatgtgtttatgaatcctctcacttacaaagtgttcaacct 15841482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 34544201 - 34544148
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacct 54  Q
    ||||||||||| ||||| ||||||||||||||| | |||||| ||| |||||||    
T  34544201 aaaaccttaaggcaatgagtttatgggtcctctcatttataaagtgatcaacct 34544148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41603252 - 41603305
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacct 54  Q
    |||||||||||||| | |||||||||||| ||| |||||||| ||| |||||||    
T  41603252 aaaaccttaagacactatgtttatgggtcttctcacttataaagtgctcaacct 41603305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 7e-33; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 36178668 - 36178772
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||    
T  36178668 aaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaa 36178765  T
Q  101 ccaacac 107  Q
    | |||||    
T  36178766 ctaacac 36178772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 37106283 - 37106179
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    |||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||    
T  37106283 aaaaccttaaggaaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaa 37106186  T
Q  101 ccaacac 107  Q
    |||||||    
T  37106185 ccaacac 37106179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 14745730 - 14745833
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||  |||||||||  ||||||||||||||    
T  14745730 aaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataa--ctcacacttgcaaa 14745827  T
Q  101 ccaaca 106  Q
    ||||||    
T  14745828 ccaaca 14745833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 41283538 - 41283641
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |  |||||||||  ||||||||||||||    
T  41283538 aaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatatgggacatataa--ctcacacttgcaaa 41283635  T
Q  101 ccaaca 106  Q
    ||||||    
T  41283636 ccaaca 41283641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5542688 - 5542792
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |  |||||||||  ||||||||||||||    
T  5542688 aaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattttattcgatatgggacatataa--ctcacacttgcaaa 5542785  T
Q  101 ccaacac 107  Q
    |||||||    
T  5542786 ccaacac 5542792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5543061 - 5543165
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    |||| |||||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||    
T  5543061 aaaatcttaaggcaataggtttatggatcctcttacttataaggtgttcaacctttactattttatcggatgtgggacatataa--ctcacacttgcaaa 5543158  T
Q  101 ccaacac 107  Q
    |||||||    
T  5543159 ccaacac 5543165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 36178332 - 36178435
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||||||||| ||||||| |||| |||||||||||||||||| ||||||||||||||||| || ||  |||||||||  ||||||||||||||    
T  36178332 aaaaccttaagacaatgggtttatgagtccccttacttataaggtgttccacctttactattttatccgaagtgggacatataa--ctcacacttgcaaa 36178429  T
Q  101 ccaaca 106  Q
    ||||||    
T  36178430 ccaaca 36178435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 7598684 - 7598600
Alignment:
Q  21 ttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 107  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||  |||||||||||| ||||||||    
T  7598684 ttatgggtcctcttacttataaggtgttcaacctttacttttttatctgatgtgggacatataa--ctcacacttgcacaccaacac 7598600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 37106019 - 37105911
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    |||| |||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||  |||||  |||||||||  ||||||||||||||    
T  37106019 aaaatcttaaggcaatgagtttatgggtccccttacttataaggtgttcaacctttactattttattcgatgtgggacatataa--ctcacacttgcaaa 37105922  T
Q  101 ccaacacaaat 111  Q
    || ||| ||||    
T  37105921 cccacaaaaat 37105911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 962693 - 962607
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| || |||| |||||  ||||||||||||    
T  962693 aaaaccttaagacaatgggtttatgggtcctctcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactc 962607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 15511558 - 15511644
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||| | ||| |||||||||||||    
T  15511558 aaaatcttaagacaatgggtttatgggtcctcttacttataacgtgttcaacctttactcttttatccgttgtgtgacatataactc 15511644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 15880358 - 15880272
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||   |||||||||||    
T  15880358 aaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtggaacatataactc 15880272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 42514744 - 42514658
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||| |||||| | ||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||    
T  42514744 aaaatcttaaggcgatgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatctgatgtaggacatataactc 42514658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 6421480 - 6421394
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  6421480 aaaacctcaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactc 6421394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 1769969 - 1769884
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaaca 106  Q
    ||||||| |||||||||||||||||||||||||| |||||| ||||||| ||||| ||||||||||  |||||||||||| |||||||    
T  1769969 gtttatgagtcctcttacttataaggtgttcaacttttactcttttatccgatgtgtgacatataa--ctcacacttgcacaccaaca 1769884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 40733594 - 40733526
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||    
T  40733594 gtttatgggtcctcttacttataaggtgttcaacatttacttttttatctgatgtgggacatataactc 40733526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 14745357 - 14745461
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| ||||| |||||||||||||| |||||| ||| ||||||||| ||||||||||||  |||||  |||||||||  |||||| |||||||    
T  14745357 aaaaccttaaggcaatgggtttatgggtcctcatacttacaagatgttcaaccattactattttattcgatgtgggacatataa--ctcacagttgcaaa 14745454  T
Q  101 ccaacac 107  Q
    |||||||    
T  14745455 ccaacac 14745461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 28254300 - 28254383
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 84  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| || |||| |||||  |||||||||    
T  28254300 aaaaccttaaggcaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgggacatataa 28254383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 31899496 - 31899575
Alignment:
Q  8 taagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||   |||||||||||    
T  31899496 taaggcaatgagtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactc 31899575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 33731743 - 33731648
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttg 96  Q
    ||||||||||| ||||  |||||||| ||||||||||||||||||| |||||||||||| ||||||| |||||  || ||||||||| ||||||||    
T  33731743 aaaaccttaaggcaataggtttatggatcctcttacttataaggtgctcaacctttactcttttatccgatgtgagatatataactcacacacttg 33731648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 6713071 - 6712985
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||  ||||  |||||||||||||||||||||||||||||||||| |||||| ||||||| |||||  ||||||||||||    
T  6713071 aaaaccttaaagcaataggtttatgggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgagacatataactc 6712985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 12529091 - 12529177
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||| ||||| ||||| ||||||| ||||||||||||||| ||||||||| ||||||| |||||| ||||||| ||||||||||||    
T  12529091 aaaactttaaggcaatgagtttatgagtcctcttacttatacggtgttcaatctttactgttttatttgatgtaggacatataactc 12529177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 38796683 - 38796769
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| || |  ||||||||||||||||||||||||||||||||||||||| | ||||||| |||||  ||||||||||||    
T  38796683 aaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacctttattgttttatcagatgtgggacatataactc 38796769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6422205 - 6422133
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||||||||| | ||| ||||||||||||||||| |||||| |||||||||||||||| |||||||||||||    
T  6422205 aaaaccttaaggctatgggtttatgggtcctcttaattataatgtgttcaacctttacttttttatctgatgt 6422133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 36178234 - 36178306
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    |||| |||||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||||| |||||    
T  36178234 aaaatcttaaggcaatgggtttatgggttcccttacttataaggtgttcaacctttactattttatccgatgt 36178306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 16542544 - 16542458
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||| |||||| ||||| ||||||  ||||||||| ||||||||||||||||||||||||||||||| |||||  ||| ||||||||    
T  16542544 aaaatcttaaggcaatgagtttataagtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacttataactc 16542458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 28531377 - 28531463
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||| |||||| ||||| ||||||||| |||||||||||||||||||||||||||| || || |||| |||||  ||||||||||||    
T  28531377 aaaatcttaaggcaatgagtttatgggacctcttacttataaggtgttcaacctttgcttttctatccgatgtgggacatataactc 28531463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 36005943 - 36006001
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttact 59  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  36005943 aaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacttttact 36006001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 37632678 - 37632746
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||||||||||  |||  |||||||||||||||||| |||||| ||||||||||||    
T  37632678 gtttatgggtcctcttacttataaaatgtcaaacctttactattttatccgatgtaggacatataactc 37632746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 38796299 - 38796367
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||  ||||||||||||    
T  38796299 gtttataggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgggacatataactc 38796367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 33561514 - 33561600
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||| ||||||||||||||| |||||||| ||||| |||||  ||| || ||||||||||   |||||||||||    
T  33561514 aaaaccttaagacaatgagtttatgggtcctctcacttataaagtgtttaacctccacttttctatctgatgtggaacatataactc 33561600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 35580787 - 35580872
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| |||||||| |||||| |||||||||||||||||| |||| | ||||||| |||||  ||||||||||||    
T  35580787 aaaaccttaaggcaatgggtttatgg-tcctctcacttataaggtgttcaacatttattgttttatccgatgtgggacatataactc 35580872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 31468813 - 31468895
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| |||||||||||||||||    |||| | ||||||||||||||||||||| |||||  ||||||||||||    
T  31468813 aaaaccttaaggcaatgagtttatgggtcctctta----taagatattcaacctttactattttatccgatgtgggacatataactc 31468895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 7598323 - 7598240
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 84  Q
    ||||||||||| | ||| ||||||||||||||||| |||||||||||| |||||||||| || |||  ||||||  ||||||||    
T  7598323 aaaaccttaaggctatgagtttatgggtcctcttatttataaggtgttgaacctttacttttctattcgatgtagaacatataa 7598240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 28254176 - 28254247
Alignment:
Q  2 aaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    |||| ||||| ||| ||||||||| |||||||||||||||| |||||||||||||||| || |||| |||||    
T  28254176 aaactttaaggcaaagtgtttatgagtcctcttacttataaagtgttcaacctttacttttctatccgatgt 28254247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 40163458 - 40163520
Alignment:
Q  23 atgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataac 85  Q
    ||||||| ||||||||||||||||||||||||||||| || |||| |||||  ||||||||||    
T  40163458 atgggtcatcttacttataaggtgttcaacctttacttttctatccgatgtgggacatataac 40163520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 40679692 - 40679778
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||| |||||| | ||| |||||||||| |||||||||||||||||||||||| ||||| || |||| ||| |  ||||||||||||    
T  40679692 aaaatcttaaggcgatgggtttatgggttctcttacttataaggtgttcaacccttacttttctatccgatatgggacatataactc 40679778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 31259697 - 31259750
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatg 72  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||||| ||||    
T  31259697 gtttatgggtcatcttacttataaggtgttgaacctttactcttttatccgatg 31259750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 16590978 - 16590897
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttac-tattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||||||||||||||||||||||||      |||||||||||||| | |||||| ||||||  ||||||||||||    
T  16590978 aaaaccttaaggcaatgtgtttatgggtcctcttactt------tgttcaacctttactttttttatttgatgtgggacatataactc 16590897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 29874086 - 29874170
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataac 85  Q
    ||||||||||| ||||| ||||||||||||||  | |||||| |||||||||||  ||| || ||||||||||  ||||||||||    
T  29874086 aaaaccttaaggcaatgggtttatgggtcctcccaattataaagtgttcaacctccacttttctatctgatgtgggacatataac 29874170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 36785664 - 36785712
Alignment:
Q  39 ataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  36785664 ataaggtgttcaacctttactattttatccgatgtgggacatataactc 36785712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5367550 - 5367484
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatc 67  Q
    |||||||||||   ||||||| |||| || |||||||||||||||||||||||||| || |||||||    
T  5367550 aaaaccttaaggttatgtgttcatggatcatcttacttataaggtgttcaacctttgctcttttatc 5367484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 29676618 - 29676544
Alignment:
Q  13 caatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||| |||||||||| |||| |||||||| |||||||| ||||||| |||||||  ||||  ||||||||||||    
T  29676618 caatgagtttatgggttctctcacttataatgtgttcaatctttactcttttatccaatgtgagacatataactc 29676544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31385832 - 31385779
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacct 54  Q
    ||||||||||| ||||| ||||||||||||| | |||||||||||| |||||||    
T  31385832 aaaaccttaaggcaatgggtttatgggtcctttcacttataaggtgctcaacct 31385779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 29676999 - 29676912
Alignment:
Q  5 ccttaagacaatgtgtttatggg-----tcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||| ||||| |||||||||     |||||| || ||||||||||| |||||||||| ||||||| |||||  ||||||||||||    
T  29676999 ccttaaggcaatgggtttatgggtcttctcctctcacctataaggtgttaaacctttactcttttatccgatgtgggacatataactc 29676912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 23346331 - 23346274
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttact 59  Q
    ||||||||||| | ||| ||||||||| ||||||| |||||||||||| ||||||||||    
T  23346331 aaaaccttaaggctatgggtttatgggccctctta-ttataaggtgtttaacctttact 23346274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36784323 - 36784365
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataag 43  Q
    ||||||||||||||| | ||||||||||| |||||||||||||    
T  36784323 aaaaccttaagacaaagggtttatgggtcatcttacttataag 36784365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 37895124 - 37895210
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||| || || |||||| |||||| |||||| |||| | || |||| |||||  ||||||||||||    
T  37895124 aaaaccttaaggcaatgggtttatgtgttcttttacttttaaggttttcaacttttatttttctatccgatgtgggacatataactc 37895210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 40733950 - 40733892
Alignment:
Q  29 cctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||||||||||| || ||||||| ||||||  |||||  ||||||||||||    
T  40733950 cctcttacttataaggtgttaaatctttactcttttattcgatgtgggacatataactc 40733892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30323559 - 30323506
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacct 54  Q
    ||||||||||| ||||| |||||| |||||||| |||| ||| |||||||||||    
T  30323559 aaaaccttaaggcaatgagtttataggtcctctcacttctaaagtgttcaacct 30323506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 41678431 - 41678527
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgca 98  Q
    ||||||||||| ||| | ||||||||||||||| |||||||| ||||| |||||   || || ||||||||||  ||||||||   ||||||||||||    
T  41678431 aaaaccttaaggcaaag-gtttatgggtcctctcacttataaagtgtttaacctccccttttctatctgatgtgagacatatataactcacacttgca 41678527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 9231322 - 9231258
Alignment:
Q  23 atgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||| |||||||| ||||||  ||||||||||||||| || |||||||| |  ||||||||||||    
T  9231322 atggatcctcttatttataatatgttcaacctttacttttctatctgatatgagacatataactc 9231258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 29873600 - 29873672
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||||||||| ||||| ||||||| ||||||  ||||||||  ||||||||||  ||| || ||||||||||    
T  29873600 aaaaccttaaggcaatgagtttatgagtcctcccacttataaaatgttcaacctccacttttctatctgatgt 29873672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 33953852 - 33953920
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||| |||||||  |||||||||||  ||| || ||||||||||  ||| ||||||||    
T  33953852 gtttatgggtcctctcacttatatagtgttcaacctccacttttctatctgatgtgggacttataactc 33953920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 18603183 - 18603269
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  18603183 aaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactc 18603269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 9498717 - 9498822
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||  |||||| |||||||    
T  9498717 aaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattctatctgatgtgagacatataa--ctcacatttgcaaa 9498814  T
Q  101 ccaacaca 108  Q
    ||||||||    
T  9498815 ccaacaca 9498822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 32487488 - 32487386
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||    
T  32487488 aaaaccttaaggcaatgggtttatgggtcctcttacttata-ggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaa 32487392  T
Q  101 ccaaca 106  Q
    ||||||    
T  32487391 ccaaca 32487386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 6500917 - 6500814
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||    
T  6500917 aaaaccttaaggcaatgagtttatgggtccttttatttataaggtgttcaacctttactattttatccgatgt-ggacatataa--ctcacacttgcaaa 6500821  T
Q  101 ccaacac 107  Q
    |||||||    
T  6500820 ccaacac 6500814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 6500545 - 6500443
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| ||||| |||||  |||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  ||||||||||||||    
T  6500545 aaaaccttaaggcaatgggtttaaaggtcctcttacttataaggtgttcaacctttactattttatccgatgt-ggacatataa--ctcacacttgcaaa 6500449  T
Q  101 ccaaca 106  Q
    ||||||    
T  6500448 ccaaca 6500443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 41170729 - 41170643
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||    
T  41170729 aaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactc 41170643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 26075225 - 26075308
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 84  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||  |||||||||    
T  26075225 aaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgagacatataa 26075308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 11417040 - 11417126
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||   |||||||||||    
T  11417040 aaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatataactc 11417126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 27502099 - 27502202
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    |||| |||||| ||||  |||||||||||||||||||||||||||||| ||||||||||||||||||  ||||  |||||||||  ||||||||||||||    
T  27502099 aaaatcttaaggcaataggtttatgggtcctcttacttataaggtgtttaacctttactattttatccaatgtgggacatataa--ctcacacttgcaaa 27502196  T
Q  101 ccaaca 106  Q
    ||||||    
T  27502197 ccaaca 27502202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 40296378 - 40296464
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||  ||||||||||||    
T  40296378 aaaacctcaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttctattttatccgatgtgggacatataactc 40296464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 36492280 - 36492378
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||| |||  ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||  |||||||||  ||||||||||||||    
T  36492280 aaaacctaaaggtaatgtgtttattggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataa--ctcacacttgcaaa 36492377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3295407 - 3295479
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3295407 aaaaccttaaggcaattggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgt 3295479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 3295078 - 3295172
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgca 98  Q
    ||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||  ||||||||   ||||||||||||    
T  3295078 aaaacctcaaggcaatgggtttatgggtcttcttacttataaggtgttcaacctttactattttatccgatgtgggacatata---ctcacacttgca 3295172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 299584 - 299498
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  299584 aaaaccttaaggctatgagtttatgggtcatcttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactc 299498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 6224291 - 6224205
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||| ||||||| || ||  ||||||||||||    
T  6224291 aaaaccttaaggcgatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgaagtgggacatataactc 6224205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13415823 - 13415909
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||  |||  |||||||||||||||||||||||||||||||||||||||||| |||||| |||||  ||||||||||||    
T  13415823 aaaaccttaaggtaataggtttatgggtcctcttacttataaggtgttcaacctttactaatttatccgatgtgggacatataactc 13415909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 25328030 - 25327944
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| || |  |||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| ||||||||||||    
T  25328030 aaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacttttactgttttatccgatgtaggacatataactc 25327944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26074209 - 26074295
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||| |||||||||||||| ||| |||||||||||||||||| ||||||| ||||| |||||||||||||    
T  26074209 aaaaccttaaggcaatgggttcatgggtcctcttacatatgaggtgttcaacctttacttttttatccgatgtgtgacatataactc 26074295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 26074707 - 26074621
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |   |||||||||||    
T  26074707 aaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatatggaacatataactc 26074621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 29549318 - 29549416
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    |||||||||||  |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| |   ||||||||  ||||||||||||||    
T  29549318 aaaaccttaaggtaatgtgtttatgggtcttcttacttatatggtgttcatcctttactattttatctgatatggaacatataa--ctcacacttgcaaa 29549415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 624291 - 624187
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||| ||| | ||| ||||||||||| |||||||||||| |||||||||||||||||||||||   ||||  |||||||||  ||||||||||||||    
T  624291 aaaacctcaaggctatgggtttatgggtcatcttacttataacgtgttcaacctttactattttatacaatgtgggacatataa--ctcacacttgcaaa 624194  T
Q  101 ccaacac 107  Q
    |||||||    
T  624193 ccaacac 624187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 7768925 - 7768837
Alignment:
Q  21 ttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacacaaat 111  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||| |||||| || ||||||  |||||||||| ||||||||| ||||    
T  7768925 ttatgggtccttttacttataaggtgttcaacctttattattttatccgatgtaggatatataa--ctcacacttgaaaaccaacaaaaat 7768837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26074845 - 26074931
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||  |||||||||||||| ||||||||  |||||||||||||||| ||||||| |||||  ||||||||||||    
T  26074845 aaaaccttaagacaataggtttatgggtcctcctacttatattgtgttcaacctttactcttttatccgatgtgggacatataactc 26074931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 35150101 - 35150016
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||||||||  |||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||  ||||||||||||    
T  35150101 aaaaccttaagacaatggatttatgggtc-tcttacttataaggtgttcaaccttgactcttttatccgatgtgggacatataactc 35150016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 15370175 - 15370108
Alignment:
Q  20 tttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||  |||||  ||||||||||||    
T  15370175 tttatgggtcctcttacttataagatgttcaacctttactattttattcgatgtgggacatataactc 15370108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 41632859 - 41632792
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 86  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||| |||||  |||||||||||    
T  41632859 gtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataact 41632792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 5723854 - 5723957
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||||||||   || |||||| ||||||| ||||| ||||||||| |||| ||||||||| |||||  |||||||||  ||||||||||||||    
T  5723854 aaaaccttaagacaataaattaatgggttctcttacatataatgtgttcaacttttattattttatccgatgtgggacatataa--ctcacacttgcaaa 5723951  T
Q  101 ccaaca 106  Q
    ||||||    
T  5723952 ccaaca 5723957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 12662715 - 12662801
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||| ||||||||||||  |||||||||  ||||||||||||  ||||||||||||||||||||||| |||||  ||||||||||||    
T  12662715 aaaaacttaagacaatggatttatgggttttcttacttataaaatgttcaacctttactattttatccgatgtgggacatataactc 12662801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 42405659 - 42405745
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| || |  ||||||| ||||| |||||| |||||||||||||||||||||||||||| |||||  ||||||||||||    
T  42405659 aaaaccttaaggcattaggtttatgagtccttttacttgtaaggtgttcaacctttactattttatccgatgttggacatataactc 42405745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 26074395 - 26074327
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||||||||||||||||||| ||||| | || ||||||||||  ||||||||||||    
T  26074395 gtttatgggtcctcttacttataaggtgttcaatctttagttttctatctgatgtgggacatataactc 26074327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 33747866 - 33747783
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataa 84  Q
    |||| |||||| ||||| |||||||| ||||||||||||||| || || |||||||||||||||||| |||||  |||||||||    
T  33747866 aaaatcttaaggcaatgagtttatggatcctcttacttataaagtatttaacctttactattttatccgatgtgggacatataa 33747783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 623913 - 623810
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaa 100  Q
    ||||||||||| | ||  |||||||| ||  ||||||| ||| ||||||||||||||||||| |||| |||||  |||||||||  ||||||||||||||    
T  623913 aaaaccttaaggctataagtttatggctcaacttacttgtaaagtgttcaacctttactattatatccgatgtgagacatataa--ctcacacttgcaaa 623816  T
Q  101 ccaaca 106  Q
    ||||||    
T  623815 ccaaca 623810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 15370497 - 15370439
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttact 59  Q
    ||||||||||| | ||| |||||||||||||||||||||||||||||||||| ||||||    
T  15370497 aaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacatttact 15370439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 36568630 - 36568716
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| |||||| || |||| |||||  ||||||||||||    
T  36568630 aaaaccttaaggcaatgggtttacgggtcatctcacttataaggtgttcaacttttacttttctatccgatgtgggacatataactc 36568716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 34753088 - 34753173
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataact 86  Q
    ||||||||||| ||||  ||||||||||| |||||||||||||||||||||| |||||| || ||||  ||||  |||||||||||    
T  34753088 aaaaccttaaggcaatcggtttatgggtcttcttacttataaggtgttcaacttttacttttctatccaatgtgggacatataact 34753173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 35167920 - 35167973
Alignment:
Q  20 tttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    |||||||||| || |||||||||||||||||||||||||| |||||||||||||    
T  35167920 tttatgggtcatcctacttataaggtgttcaacctttactcttttatctgatgt 35167973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 41635260 - 41635325
Alignment:
Q  7 ttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatg 72  Q
    |||||||||||  ||||||| |||||||| |||||||||||||||| |||||| ||||||||||||    
T  41635260 ttaagacaatggatttatggatcctcttatttataaggtgttcaacatttactcttttatctgatg 41635325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 1028598 - 1028666
Alignment:
Q  19 gtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||||||||||||||| ||||||| |||||||| || |||| |||||  ||||||||||||    
T  1028598 gtttatgggtcctcttacttataaagtgttcatcctttacttttctatccgatgtgggacatataactc 1028666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 301025 - 300970
Alignment:
Q  30 ctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataac 85  Q
    |||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||    
T  301025 ctcttacttataaggtattcaacctttactgttttatctgatgtgggacatataac 300970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 35914925 - 35914858
Alignment:
Q  20 tttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||| ||||| ||||||||||||  ||||||||||||||| ||||||| ||||| |||||||||||||    
T  35914925 tttacgggtcttcttacttataaaatgttcaacctttactcttttatccgatgtgtgacatataactc 35914858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 38427642 - 38427552
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcaca 92  Q
    |||||||||||||||||  || ||||||||||| ||||||||| ||||||||||||||| || ||||  ||||  |||||||||||| ||||    
T  38427642 aaaaccttaagacaatggattaatgggtcctct-acttataagatgttcaacctttacttttctatccaatgtgggacatataactcacaca 38427552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26590973 - 26591031
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttact 59  Q
    ||||||||||| || ||  ||||||| ||||||||||||||||||||||||||||||||    
T  26590973 aaaaccttaaggcattgaatttatggatcctcttacttataaggtgttcaacctttact 26591031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 42508707 - 42508635
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||||||||| ||||| ||||||| |||||||||||||| || |||| |||||||||| || |||| |||||    
T  42508707 aaaaccttaaggcaatgggtttatgagtcctcttacttattagatgtttaacctttacttttctatccgatgt 42508635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24489269 - 24489353
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||| |||||| ||||| ||||||||||  ||||||| |||||||||| ||||||| || || ||||||||||  ||||||||||||    
T  24489269 aaaatcttaaggcaatgggtttatgggt--tcttactaataaggtgtttaaccttttcttttctatctgatgtgggacatataactc 24489353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2411102 - 2411016
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||  |||||||||| |||||||||| ||| |||||||| ||||||  | ||||  ||||| ||||||||||||    
T  2411102 aaaaccttaaggcaataagtttatgggttctcttacttacaagatgttcaacttttacttctctatccaatgtaggacatataactc 2411016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 19275623 - 19275543
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatat 82  Q
    |||| ||||||||||||  |||||||||| |||| ||||||| ||||||||||| |||| || |||||||| || |||||||    
T  19275623 aaaatcttaagacaatgaatttatgggtcttcttccttataa-gtgttcaacctctacttttctatctgatttaagacatat 19275543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 6225104 - 6225053
Alignment:
Q  36 cttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||||||||||||||| | |||||||||||||  || |||||||||    
T  6225104 cttataaggtgttcaacctttattcttttatctgatgtgggatatataactc 6225053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 31509718 - 31509632
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||| ||| ||||| ||||||| ||||||| |||||||| ||| |||||||  ||| || |||| |||||  ||||||||||||    
T  31509718 aaaacctcaaggcaatgagtttatgagtcctctcacttataaagtgctcaacctccacttttctatccgatgtgagacatataactc 31509632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 36521959 - 36522045
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||  ||||||||||||||| | ||| |  |||||||||||  ||| || ||||||||||  ||||||||||||    
T  36521959 aaaaccttaaggcaattggtttatgggtcctctcatttaaagagtgttcaacctcaacttttctatctgatgtgggacatataactc 36522045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 39309754 - 39309693
Alignment:
Q  26 ggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||||||| |||||| ||||||||| |||||  ||||||| |||||  ||||||||||||    
T  39309754 ggtcctcttatttataatgtgttcaacatttacccttttatccgatgtgggacatataactc 39309693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 5491 - 5405
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  5491 aaaactttaagacaatatgtttatgggccctcttacttataaggtgttcaacctttactattttatccgatgtaggacatataactc 5405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 5867 - 5786
Alignment:
Q  6 cttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  5867 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgcgacatataactc 5786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 17519 - 17605
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  17519 aaaaccttaaggctatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtgtgacatataactc 17605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 230 - 309
Alignment:
Q  26 ggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactctcacacttgcaaaccaacac 107  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||  |||||||||||||||||||||    
T  230 ggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataa--ctcacacttgcaaaccaacac 309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 577 - 663
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||||  ||||||||||||    
T  577 aaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatataactc 663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 5452 - 5366
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || |||| |||||   |||||||||||    
T  5452 aaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactgttctatccgatgtggaacatataactc 5366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 10191 - 10260
Alignment:
Q  18 tgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||  ||||||||||||    
T  10191 tgtttatgggtcctcttacttataaggtgttcaacttttaccattttatccgatgtgagacatataactc 10260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1169 - 1255
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactc 87  Q
    ||||||||||| ||||| ||||||| ||||| || |||||||||||||||||||||||| |||||||  ||||  ||||||||||||    
T  1169 aaaaccttaaggcaatgggtttatgagtcctttttcttataaggtgttcaacctttactcttttatccaatgtgggacatataactc 1255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1754 - 1802
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttc 49  Q
    ||||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  1754 aaaaccttaaggcaatgggtttatgggtcctctcacttataaggtgttc 1802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 47455 - 47383
Alignment:
Q  1 aaaaccttaagacaatgtgtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 73  Q
    ||||| ||||| ||||| |||||||| | |||||||||||||||||||||| ||||||||||||||| |||||    
T  47455 aaaactttaaggcaatgggtttatggattctcttacttataaggtgttcaaactttactattttatcggatgt 47383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 1752 times since January 2019
Visitors: 1427