View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0122_low_2 (Length: 814)

Name: NF0122_low_2
Description: NF0122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0122_low_2
NF0122_low_2
[»] chr7 (53 HSPs)
chr7 (107-785)||(40763205-40763871)
chr7 (154-294)||(29034678-29034818)
chr7 (153-294)||(7322931-7323072)
chr7 (154-294)||(5240310-5240450)
chr7 (155-294)||(43567484-43567623)
chr7 (153-294)||(8292735-8292876)
chr7 (153-270)||(22521576-22521693)
chr7 (154-294)||(24359686-24359826)
chr7 (154-294)||(27053471-27053611)
chr7 (154-293)||(8380432-8380571)
chr7 (153-294)||(1910234-1910374)
chr7 (168-266)||(3681699-3681797)
chr7 (154-294)||(5347950-5348087)
chr7 (187-294)||(48454800-48454907)
chr7 (154-235)||(29687467-29687548)
chr7 (155-268)||(42222213-42222326)
chr7 (154-270)||(41188788-41188904)
chr7 (154-294)||(36279113-36279250)
chr7 (154-268)||(46478560-46478673)
chr7 (154-294)||(8258621-8258756)
chr7 (155-223)||(40194818-40194886)
chr7 (154-270)||(49069546-49069662)
chr7 (167-294)||(22707053-22707179)
chr7 (154-269)||(40066920-40067033)
chr7 (154-294)||(30538458-30538595)
chr7 (167-251)||(31626062-31626146)
chr7 (155-268)||(43958087-43958200)
chr7 (167-231)||(46042752-46042816)
chr7 (153-230)||(30388702-30388779)
chr7 (732-785)||(40763938-40763991)
chr7 (153-229)||(10575802-10575878)
chr7 (166-254)||(32204185-32204273)
chr7 (24-106)||(40763205-40763275)
chr7 (154-250)||(18529175-18529271)
chr7 (154-228)||(44296945-44297019)
chr7 (153-234)||(6548520-6548601)
chr7 (154-231)||(16082473-16082550)
chr7 (153-234)||(48879660-48879741)
chr7 (188-230)||(4686085-4686127)
chr7 (70-106)||(7323036-7323072)
chr7 (178-234)||(16931906-16931961)
chr7 (178-234)||(16937289-16937344)
chr7 (70-106)||(22521576-22521612)
chr7 (195-231)||(35003637-35003673)
chr7 (178-250)||(40774264-40774336)
chr7 (178-229)||(5543061-5543112)
chr7 (71-106)||(24359791-24359826)
chr7 (71-106)||(29687467-29687502)
chr7 (179-234)||(41141040-41141095)
chr7 (72-106)||(40194818-40194852)
chr7 (178-224)||(43189685-43189731)
chr7 (188-229)||(3720157-3720198)
chr7 (178-251)||(29247938-29248010)
[»] chr8 (38 HSPs)
chr8 (514-782)||(42911328-42911596)
chr8 (153-294)||(21016035-21016176)
chr8 (157-294)||(6939152-6939289)
chr8 (153-294)||(19389288-19389429)
chr8 (154-294)||(45337995-45338135)
chr8 (153-294)||(4989926-4990064)
chr8 (155-262)||(26195383-26195490)
chr8 (162-291)||(21016233-21016362)
chr8 (160-268)||(25249345-25249453)
chr8 (359-516)||(42910826-42910974)
chr8 (167-268)||(8018765-8018866)
chr8 (154-263)||(18068953-18069062)
chr8 (154-294)||(10694798-10694938)
chr8 (172-294)||(26672799-26672920)
chr8 (155-267)||(37433258-37433369)
chr8 (153-292)||(34713899-34714040)
chr8 (154-294)||(3174447-3174589)
chr8 (154-294)||(44874324-44874456)
chr8 (152-294)||(5129434-5129582)
chr8 (154-262)||(6433535-6433643)
chr8 (153-223)||(33741523-33741593)
chr8 (154-262)||(14855394-14855502)
chr8 (176-261)||(26892799-26892884)
chr8 (153-267)||(6396278-6396392)
chr8 (154-228)||(20212433-20212507)
chr8 (193-270)||(7532815-7532892)
chr8 (154-251)||(38869995-38870092)
chr8 (195-294)||(35930168-35930267)
chr8 (155-230)||(37922972-37923046)
chr8 (181-251)||(31596442-31596512)
chr8 (157-270)||(11332796-11332909)
chr8 (70-106)||(34714004-34714040)
chr8 (154-234)||(39972190-39972270)
chr8 (167-209)||(30351595-30351637)
chr8 (188-229)||(11295507-11295548)
chr8 (181-226)||(17320000-17320045)
chr8 (24-61)||(42910722-42910759)
chr8 (107-144)||(42910722-42910759)
[»] chr1 (57 HSPs)
chr1 (154-294)||(34874558-34874698)
chr1 (154-294)||(27209696-27209836)
chr1 (153-294)||(28850885-28851025)
chr1 (153-294)||(41147453-41147594)
chr1 (154-294)||(11385972-11386112)
chr1 (154-294)||(47655346-47655486)
chr1 (154-291)||(49508712-49508848)
chr1 (154-294)||(22346212-22346352)
chr1 (154-294)||(33929957-33930097)
chr1 (155-294)||(42607299-42607438)
chr1 (153-294)||(2125682-2125823)
chr1 (171-294)||(11385785-11385908)
chr1 (155-291)||(932135-932271)
chr1 (154-294)||(24140764-24140903)
chr1 (170-294)||(32213864-32213988)
chr1 (154-269)||(4940740-4940855)
chr1 (155-294)||(7190450-7190589)
chr1 (154-267)||(49901917-49902030)
chr1 (153-273)||(6170547-6170667)
chr1 (167-291)||(40845255-40845379)
chr1 (154-294)||(43433766-43433906)
chr1 (153-267)||(28277484-28277598)
chr1 (153-270)||(50295432-50295550)
chr1 (153-294)||(29966812-29966954)
chr1 (155-272)||(52396435-52396551)
chr1 (167-294)||(31975491-31975618)
chr1 (153-294)||(45721745-45721882)
chr1 (167-268)||(4656020-4656121)
chr1 (190-294)||(5945447-5945551)
chr1 (154-251)||(50154464-50154561)
chr1 (155-267)||(26469584-26469696)
chr1 (154-230)||(47895325-47895401)
chr1 (156-231)||(30222613-30222689)
chr1 (166-268)||(40920188-40920292)
chr1 (153-234)||(43168131-43168212)
chr1 (178-230)||(17402963-17403015)
chr1 (155-294)||(44286864-44287003)
chr1 (154-229)||(44359712-44359787)
chr1 (154-231)||(48938627-48938703)
chr1 (154-234)||(14331828-14331908)
chr1 (167-271)||(41492913-41493016)
chr1 (178-230)||(41898898-41898950)
chr1 (155-234)||(8892806-8892885)
chr1 (182-235)||(51046678-51046731)
chr1 (193-249)||(894960-895016)
chr1 (70-102)||(28850993-28851025)
chr1 (178-214)||(46296240-46296276)
chr1 (71-106)||(11385972-11386007)
chr1 (71-106)||(33929957-33929992)
chr1 (71-106)||(34874558-34874593)
chr1 (188-235)||(44043500-44043547)
chr1 (71-106)||(47655451-47655486)
chr1 (199-270)||(8244128-8244195)
chr1 (188-230)||(27210750-27210792)
chr1 (474-516)||(28615743-28615785)
chr1 (72-106)||(42607404-42607438)
chr1 (73-102)||(30222613-30222642)
[»] chr4 (60 HSPs)
chr4 (154-294)||(26040338-26040478)
chr4 (154-294)||(35808374-35808514)
chr4 (154-294)||(41956191-41956331)
chr4 (154-294)||(55669730-55669870)
chr4 (167-294)||(34016629-34016756)
chr4 (154-294)||(50514592-50514731)
chr4 (155-294)||(23765570-23765709)
chr4 (154-291)||(45688734-45688871)
chr4 (153-294)||(31754928-31755069)
chr4 (154-294)||(34316700-34316841)
chr4 (153-294)||(54339103-54339243)
chr4 (154-262)||(20811254-20811362)
chr4 (153-294)||(26831764-26831904)
chr4 (153-294)||(27839284-27839425)
chr4 (153-294)||(2362619-2362762)
chr4 (154-294)||(10100091-10100231)
chr4 (154-250)||(19328950-19329046)
chr4 (153-268)||(51266914-51267029)
chr4 (155-294)||(32131134-32131273)
chr4 (154-294)||(31168125-31168265)
chr4 (154-234)||(47188703-47188783)
chr4 (154-292)||(30475416-30475554)
chr4 (154-267)||(33951691-33951804)
chr4 (154-250)||(52341592-52341688)
chr4 (198-294)||(19876161-19876257)
chr4 (206-294)||(51290473-51290561)
chr4 (153-287)||(53566935-53567072)
chr4 (153-270)||(35675192-35675309)
chr4 (153-215)||(9693528-9693590)
chr4 (154-268)||(40436072-40436186)
chr4 (188-268)||(35511184-35511264)
chr4 (154-244)||(45088061-45088148)
chr4 (153-247)||(3769803-3769897)
chr4 (185-293)||(31487743-31487851)
chr4 (155-230)||(15986258-15986333)
chr4 (153-264)||(20456559-20456670)
chr4 (179-234)||(46823488-46823543)
chr4 (168-270)||(30617954-30618056)
chr4 (167-231)||(35927315-35927379)
chr4 (178-234)||(36486724-36486780)
chr4 (155-251)||(51018400-51018496)
chr4 (208-267)||(46695967-46696026)
chr4 (168-230)||(48513624-48513686)
chr4 (193-234)||(11996141-11996182)
chr4 (167-251)||(1457556-1457640)
chr4 (171-279)||(13498110-13498218)
chr4 (171-270)||(29462809-29462908)
chr4 (154-229)||(31494704-31494779)
chr4 (71-106)||(35808479-35808514)
chr4 (71-106)||(47188748-47188783)
chr4 (71-106)||(50514696-50514731)
chr4 (199-293)||(9693361-9693454)
chr4 (188-234)||(20435828-20435874)
chr4 (72-106)||(23765570-23765604)
chr4 (188-234)||(49483122-49483168)
chr4 (196-229)||(1801635-1801668)
chr4 (178-231)||(32584560-32584613)
chr4 (153-234)||(39158364-39158445)
chr4 (181-234)||(40593620-40593672)
chr4 (188-229)||(52895749-52895790)
[»] chr3 (46 HSPs)
chr3 (155-294)||(8715480-8715618)
chr3 (155-294)||(9067367-9067505)
chr3 (154-292)||(46317477-46317615)
chr3 (154-294)||(44570364-44570504)
chr3 (154-294)||(36730131-36730271)
chr3 (153-294)||(37509101-37509242)
chr3 (154-294)||(4759828-4759968)
chr3 (154-294)||(32415560-32415700)
chr3 (154-293)||(35306323-35306462)
chr3 (155-263)||(12905292-12905399)
chr3 (154-294)||(29915553-29915693)
chr3 (154-294)||(29964706-29964846)
chr3 (154-294)||(44695649-44695789)
chr3 (154-270)||(51817314-51817430)
chr3 (154-268)||(8847456-8847570)
chr3 (154-292)||(10854850-10854992)
chr3 (154-294)||(25102300-25102439)
chr3 (154-251)||(52570771-52570870)
chr3 (153-247)||(20227405-20227499)
chr3 (154-251)||(12051029-12051126)
chr3 (154-223)||(31647295-31647364)
chr3 (154-270)||(45899545-45899662)
chr3 (194-294)||(1803919-1804019)
chr3 (171-270)||(18789-18888)
chr3 (204-294)||(48136701-48136790)
chr3 (167-234)||(11316970-11317037)
chr3 (167-230)||(34060808-34060871)
chr3 (167-230)||(41345979-41346042)
chr3 (171-251)||(18949-19029)
chr3 (168-251)||(21324521-21324603)
chr3 (181-228)||(49976185-49976232)
chr3 (238-294)||(41346349-41346405)
chr3 (193-248)||(33641282-33641337)
chr3 (167-234)||(34750295-34750362)
chr3 (182-235)||(41998901-41998954)
chr3 (71-106)||(10854850-10854885)
chr3 (71-102)||(25102408-25102439)
chr3 (71-106)||(36730236-36730271)
chr3 (172-231)||(39974847-39974906)
chr3 (72-106)||(8715584-8715618)
chr3 (72-106)||(9067471-9067505)
chr3 (72-106)||(12905365-12905399)
chr3 (167-221)||(50420688-50420742)
chr3 (196-249)||(9189255-9189308)
chr3 (170-211)||(11675320-11675361)
chr3 (187-256)||(26850510-26850579)
[»] chr2 (50 HSPs)
chr2 (167-294)||(765128-765255)
chr2 (155-268)||(2966532-2966645)
chr2 (154-294)||(39401513-39401652)
chr2 (154-294)||(17095045-17095184)
chr2 (153-294)||(27495113-27495254)
chr2 (153-291)||(39085773-39085911)
chr2 (154-270)||(6999193-6999309)
chr2 (154-294)||(17056036-17056175)
chr2 (154-294)||(17068483-17068622)
chr2 (154-293)||(862580-862719)
chr2 (160-294)||(1321165-1321299)
chr2 (154-291)||(16361557-16361694)
chr2 (157-294)||(33864349-33864486)
chr2 (154-294)||(17074466-17074605)
chr2 (153-270)||(35445292-35445410)
chr2 (153-294)||(41436468-41436609)
chr2 (153-282)||(9201485-9201613)
chr2 (171-270)||(44299683-44299782)
chr2 (154-268)||(17118377-17118490)
chr2 (154-234)||(23685690-23685770)
chr2 (160-287)||(17603808-17603935)
chr2 (160-294)||(13997882-13998016)
chr2 (153-270)||(33726370-33726487)
chr2 (167-294)||(44173123-44173250)
chr2 (153-223)||(15004917-15004987)
chr2 (155-256)||(464787-464889)
chr2 (154-268)||(2239573-2239687)
chr2 (154-212)||(11445379-11445437)
chr2 (176-286)||(43140309-43140419)
chr2 (199-250)||(11445313-11445364)
chr2 (178-268)||(34220650-34220740)
chr2 (178-234)||(747529-747585)
chr2 (153-257)||(10900265-10900369)
chr2 (155-266)||(34334167-34334278)
chr2 (72-106)||(2966532-2966566)
chr2 (150-256)||(3454714-3454819)
chr2 (154-230)||(11659253-11659329)
chr2 (70-106)||(41436468-41436504)
chr2 (71-106)||(6999193-6999228)
chr2 (71-106)||(17056140-17056175)
chr2 (71-106)||(17068587-17068622)
chr2 (71-106)||(17095149-17095184)
chr2 (178-233)||(29260167-29260222)
chr2 (188-231)||(34512671-34512714)
chr2 (178-256)||(2136451-2136529)
chr2 (193-235)||(2958506-2958548)
chr2 (187-229)||(9965098-9965140)
chr2 (196-230)||(37230253-37230287)
chr2 (155-221)||(2805373-2805441)
chr2 (187-268)||(8327004-8327085)
[»] chr6 (25 HSPs)
chr6 (153-293)||(10855423-10855562)
chr6 (154-269)||(12191484-12191599)
chr6 (153-294)||(5578264-5578405)
chr6 (161-270)||(6866913-6867022)
chr6 (154-251)||(7875202-7875299)
chr6 (153-294)||(26572060-26572196)
chr6 (158-294)||(16437568-16437696)
chr6 (154-294)||(7274192-7274332)
chr6 (186-294)||(29692319-29692427)
chr6 (154-251)||(7880448-7880545)
chr6 (206-294)||(32786259-32786346)
chr6 (172-291)||(8324085-8324204)
chr6 (154-270)||(31220329-31220445)
chr6 (154-204)||(32786060-32786110)
chr6 (153-230)||(21186059-21186136)
chr6 (153-227)||(34780023-34780097)
chr6 (155-256)||(12175552-12175652)
chr6 (178-229)||(27127550-27127601)
chr6 (167-234)||(28014639-28014706)
chr6 (153-223)||(6507438-6507508)
chr6 (182-235)||(1947424-1947477)
chr6 (153-230)||(14232533-14232610)
chr6 (71-106)||(32786060-32786095)
chr6 (190-235)||(19646024-19646069)
chr6 (164-229)||(29964302-29964367)
[»] chr5 (44 HSPs)
chr5 (154-294)||(5151480-5151620)
chr5 (154-291)||(35653236-35653373)
chr5 (153-294)||(4421942-4422083)
chr5 (154-294)||(4962495-4962634)
chr5 (153-273)||(25017290-25017410)
chr5 (154-294)||(34546769-34546909)
chr5 (153-291)||(3639056-3639193)
chr5 (154-294)||(16315512-16315650)
chr5 (153-294)||(39567893-39568034)
chr5 (154-294)||(28143101-28143241)
chr5 (154-294)||(35945237-35945377)
chr5 (153-264)||(43414072-43414183)
chr5 (172-294)||(1479114-1479236)
chr5 (168-294)||(37243852-37243977)
chr5 (166-270)||(1759820-1759924)
chr5 (154-250)||(13951258-13951354)
chr5 (155-294)||(338742-338881)
chr5 (160-251)||(12068195-12068286)
chr5 (154-249)||(12914166-12914261)
chr5 (154-294)||(8410133-8410273)
chr5 (183-269)||(27823279-27823365)
chr5 (167-273)||(25568290-25568397)
chr5 (158-294)||(10017600-10017733)
chr5 (202-291)||(15915871-15915960)
chr5 (161-293)||(40099333-40099461)
chr5 (167-230)||(39335477-39335540)
chr5 (154-230)||(10406779-10406854)
chr5 (178-234)||(39069314-39069370)
chr5 (153-243)||(39693000-39693090)
chr5 (166-254)||(6823770-6823859)
chr5 (167-209)||(16899635-16899677)
chr5 (154-256)||(39042051-39042153)
chr5 (178-251)||(3015071-3015144)
chr5 (178-234)||(678465-678521)
chr5 (178-230)||(10163668-10163720)
chr5 (193-229)||(24288517-24288553)
chr5 (193-229)||(24373668-24373704)
chr5 (154-234)||(39167587-39167666)
chr5 (195-230)||(5058777-5058812)
chr5 (188-231)||(12349585-12349628)
chr5 (183-273)||(27535114-27535205)
chr5 (167-234)||(28599692-28599759)
chr5 (154-204)||(4838272-4838322)
chr5 (178-251)||(38610313-38610386)
[»] scaffold0062 (3 HSPs)
scaffold0062 (154-294)||(16750-16889)
scaffold0062 (154-294)||(26918-27057)
scaffold0062 (154-294)||(37084-37223)
[»] scaffold0002 (1 HSPs)
scaffold0002 (155-230)||(392174-392249)
[»] scaffold0809 (2 HSPs)
scaffold0809 (153-213)||(4705-4765)
scaffold0809 (205-256)||(4286-4337)
[»] scaffold0050 (1 HSPs)
scaffold0050 (168-223)||(37428-37483)
[»] scaffold0144 (1 HSPs)
scaffold0144 (154-234)||(39580-39658)
[»] scaffold0169 (1 HSPs)
scaffold0169 (188-235)||(9045-9092)


Alignment Details
Target: chr7 (Bit Score: 598; Significance: 0; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 598; E-Value: 0
Query Start/End: Original strand, 107 - 785
Target Start/End: Original strand, 40763205 - 40763871
Alignment:
Q  107 gaattaagatacatctttattggaaattaccaaatactttatggtttcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagtt 206  Q
    ||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40763205 gaattaagatacatctttattggaaattaccaaata------------aaaagtagcatatttgcattggtttcaacaacattttaacttttaaaaagtt 40763292  T
Q  207 aaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcacggacaatggttagcattctcgatactttataa 306  Q
    |||||||||||||||||||||||| ||| |||||||||||||||| |||| ||||||||||||| || || |||||||||||||||||||||||||||||    
T  40763293 aaatttatcacttttcaccatttttcaatgttatatttctatttttatccccttatccaatgccccaagggcaatggttagcattctcgatactttataa 40763392  T
Q  307 accatccatcaacatttttattcttaacattattgatgttttcagggacaattgaaacatcaatttcgtttttgaaaatgtagagtcaaacaattacatc 406  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40763393 accatccatcaacatttttattcttaacatttttgatgttttcagggacaattgaaacatcaatttcgtttttgaaaatgtagagtcaaacaattacatc 40763492  T
Q  407 cttaaaattaacaaaatttagaaatgatctctaaaattcatacttccctgtctcacgtgtcccttagagacaaattcaaaaactaaattgatcaatccaa 506  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40763493 cttaaaattaacaaaatttagaaatgatctctaaagttcatacttccctgtctcacgtgtcccttagagacaaattcaaaaactaaattgatcaatccaa 40763592  T
Q  507 atagactaattgatttatgcttctgaagctagtacattttatgcatgttattattgggtggtgtgaatgcagatatctgctgttgctcggattgggaatg 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40763593 atagactaattgatttatgcttctgaagctagtacattttatgcatgttattattgggtggtgtgaatgcagatatctgctgttgctcggattgggaatg 40763692  T
Q  607 ctcttgcttatgctacacatacatttttcaacaagcatgggtttctttatgtgcgcacgccaattgtcacgacaagtgattgtgagggtgctggtgaaat 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40763693 ctcttgcttatgctacacatacatttttcaacaagcatgggtttctttatgtgcgcacgccaattgtcacgacaagtgattgtgagggtgctggtgaaat 40763792  T
Q  707 gtttcaagtgacaactctgttcagtgaagcagagaggttggagaaggaactgatacagaatcctcctcctactgaatct 785  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40763793 gtttcaagtgacaactctgttcagtgaagcagagaggttggagaaggaactgatacagaatcctcctcctactgaatct 40763871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 29034678 - 29034818
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||| |    
T  29034678 caaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatactatatttatattttta 29034777  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| |||||||||||||||| ||||||||||||||||||||    
T  29034778 tccccttatccaatgcctcaaggacaatggttagcattctc 29034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 153 - 294
Target Start/End: Complemental strand, 7323072 - 7322931
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||     
T  7323072 tcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccatttttcaaggttatatttctattttt 7322973  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||| ||||||||||  |||| || |||||||||||||||||    
T  7322972 atcctcttatccaatatctcaagggcaatggttagcattctc 7322931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 5240450 - 5240310
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||   |||||||||||||| |    
T  5240450 caaaagtagcatgtttgcattggtttcaataacattttgacttttaaaaagttaaatttatcacttttcaccatttttcaatactatatttctattttta 5240351  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||  ||||||||||||||| ||||||||||||||||||||    
T  5240350 tccctttatccaatgcctcaaggacaatggttagcattctc 5240310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 43567623 - 43567484
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||||| ||    
T  43567623 aaaagtatcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatactataattctatttttat 43567524  T
Q  255 ccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |  ||||||||||||| || || |||||||||||| ||||    
T  43567523 ctccttatccaatgccccaagggcaatggttagcaatctc 43567484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 153 - 294
Target Start/End: Original strand, 8292735 - 8292876
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||| |||| |||| ||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||| | ||||||||||||||     
T  8292735 tcaaaagtagcatgtttggattgatttcaacaacattttgacttttaaaaaggcaaatttataacttttcaccattttccaatgctatatttctattttt 8292834  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||| ||||||||||||  ||  ||||||| |||||||||||    
T  8292835 atccccttatccaatgctccaaagacaatgattagcattctc 8292876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 22521576 - 22521693
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||| | |||||||||| |||     
T  22521576 tcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaagaagttaaatttatcacttctcatcattttccaatgctatatttctagtttt 22521675  T
Q  253 atccacttatccaatgcc 270  Q
    |||| |||||||||||||    
T  22521676 atcctcttatccaatgcc 22521693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 24359826 - 24359686
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||  | |||||||||||||| |    
T  24359826 caaaagtagcatgtttgcattggtttcaacaacattttaacttttaaaaagttaaatttatccctttttaccattttccattgctatatttctattttta 24359727  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| |||||||||| ||  | || ||||||||| |||||||    
T  24359726 tccccttatccaatacccgaagggcaatggttaacattctc 24359686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 27053611 - 27053471
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  | | |||||||||||||| |    
T  27053611 caaaagtagaatgtttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcaccattttctgatgctatatttctattttta 27053512  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||  ||||||||||||  | |||||||| |||| ||||||    
T  27053511 tccctttatccaatgccctaaggacaatgattagtattctc 27053471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 154 - 293
Target Start/End: Original strand, 8380432 - 8380571
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||| |||||| |    
T  8380432 caaaagtagtatgttttcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcatcattttccaatgctatatttttattttta 8380531  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattct 293  Q
    ||| |||||||||| || || || | ||||||| ||||||    
T  8380532 tccccttatccaataccccaagggccatggttaacattct 8380571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 153 - 294
Target Start/End: Original strand, 1910234 - 1910374
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||| ||| |||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||     
T  1910234 tcaaaagtagcatgtttacatttgtttcaacaacattttaacttttaaaaagttaaatttatcatttttcaccattttctaatgttatatttctattttt 1910333  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||| |||||| ||||||  | || ||||| |||||||||||    
T  1910334 atcc-cttatcaaatgccctaagggcaatgattagcattctc 1910374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 168 - 266
Target Start/End: Original strand, 3681699 - 3681797
Alignment:
Q  168 ttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 266  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||| |||| |||||||||    
T  3681699 ttgcattggtttcaacaacattttaacttttaaaaagttaaatttatcacttttcaccattttccaatgttgtatttttatttttatccccttatccaa 3681797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 5348087 - 5347950
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||  |    
T  5348087 caaaagtagcatgtttgcattggtttcaaca---ttttgacttttaaaaagttaaatttatcacttttcatcattttccaatgttatatttctatttata 5347991  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    | | ||||| |||||||  | ||  ||||||||||||||||    
T  5347990 ttcccttattcaatgccctaagggtaatggttagcattctc 5347950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 48454907 - 48454800
Alignment:
Q  187 attttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcacggacaatggtta 286  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||||| || ||  ||||||||    
T  48454907 attttgacttttaaaaagttaaatttatcacttttcaccatttcccaatgttatatttctatttttatccccttatccaatgccccaagggtaatggtta 48454808  T
Q  287 gcattctc 294  Q
     |||||||    
T  48454807 acattctc 48454800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 154 - 235
Target Start/End: Original strand, 29687467 - 29687548
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaac 235  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  29687467 caaaagtagcatgtttgcattggtttcaacaacattttaacttttaaaaagttaaattcatcacttttcaccattttccaac 29687548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 42222213 - 42222326
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    ||||||| ||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||| ||    
T  42222213 aaaagtaacatgtttgtattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcaccattttccaataccatatttctatttttat 42222312  T
Q  255 ccacttatccaatg 268  Q
    || |||||| ||||    
T  42222313 ccccttatctaatg 42222326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 154 - 270
Target Start/End: Complemental strand, 41188904 - 41188788
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||| |||| || ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||| |||||| |    
T  41188904 caaatgtagtatgtttgcattgatttcaacagcattttgacttttaaaaagttaaatttatcacctttcaccattttccaatgctatatttatattttta 41188805  T
Q  254 tccacttatccaatgcc 270  Q
    ||| |||||| ||||||    
T  41188804 tcctcttatcaaatgcc 41188788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 36279113 - 36279250
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| ||||||||  |||||||   ||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||| |||||| |    
T  36279113 caaaagtagcatgtttgcattaatttcaac---attttgatttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttatattttta 36279209  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||  |||||||||||| || |   ||||||||||||||||    
T  36279210 tcctattatccaatgccccaagagtaatggttagcattctc 36279250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 154 - 268
Target Start/End: Complemental strand, 46478673 - 46478560
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||||||| ||||||| ||||| ||| | |||||||||||||| |    
T  46478673 caaaagtaacatatttgcattagtttcaacaatattttaacttttaaaaagttaaatttatca-ttttcactatttttcaatgatatatttctattttta 46478575  T
Q  254 tccacttatccaatg 268  Q
    ||| |||||||||||    
T  46478574 tccccttatccaatg 46478560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 8258756 - 8258621
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||||||| || ||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||| ||     ||||||||||||| |    
T  8258756 caaaagtagtatgtttgcattggtttcaacaaaattatgactattaaaaagttaaatttatcacttttcaccatttttca-----atatttctattttta 8258662  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| ||||||| ||||| || || |||| |||| |||||||    
T  8258661 tccccttatccgatgccccaagggcaatagttaacattctc 8258621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 40194818 - 40194886
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttca 223  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40194818 aaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaaattaaatttatcacttttca 40194886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 154 - 270
Target Start/End: Original strand, 49069546 - 49069662
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||| ||| |||| |||||||||||||| || |||| ||||||||||||| |||||||||||||||||||||| |||   |||||||||||||| |    
T  49069546 caaaagtaacatgtttgtattggtttcaacaatatattgatttttaaaaagttagatttatcacttttcaccatttttcaatactatatttctattttta 49069645  T
Q  254 tccacttatccaatgcc 270  Q
    ||  |||||||||||||    
T  49069646 tcttcttatccaatgcc 49069662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 167 - 294
Target Start/End: Original strand, 22707053 - 22707179
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 266  Q
    |||||||||||||||||||||| || ||||||||||||| |||||||||| ||||||  ||||||||| | |||||||||||||| ||||  |||| |||    
T  22707053 tttgcattggtttcaacaacatgttaacttttaaaaagtaaaatttatcatttttcattattttccaatgctatatttctatttttatcc-tttattcaa 22707151  T
Q  267 tgcctcacggacaatggttagcattctc 294  Q
    |||| ||  | |||||||||||||||||    
T  22707152 tgccccaaaggcaatggttagcattctc 22707179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 154 - 269
Target Start/End: Complemental strand, 40067033 - 40066920
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||||||| || |||| |||||||| ||||||||||| | |||||||||||||||||||||| ||||||||||||| |||  ||||||||||||||| |    
T  40067033 caaaagtagtat-tttgtattggttttaacaacatttt-atttttaaaaagttaaatttatcatttttcaccatttttcaatattatatttctattttta 40066936  T
Q  254 tccacttatccaatgc 269  Q
    ||| ||||||||||||    
T  40066935 tccccttatccaatgc 40066920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 30538595 - 30538458
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||| ||| ||||||||| ||||||||   |||||| |||||||||||||||||||||| ||||||| |||||| ||   |||||||||||||| |    
T  30538595 caaaagtaacatgtttgcattgatttcaaca---ttttgatttttaaaaagttaaatttatcatttttcactattttctaatactatatttctattttta 30538499  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| |||||| |||| | || |||||||| |||||||||||    
T  30538498 tccccttatctaatgtcccaaggacaatgattagcattctc 30538458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 31626146 - 31626062
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 251  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||  ||  |||||||| ||||||    
T  31626146 tttgcattggtttcaacaacattttgatttttaaaaagttaaatttatcacttttcatcattttttaatattatatttttatttt 31626062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 43958200 - 43958087
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    ||||||| ||| |||||||||||||||  || ||||||||||||||||| |||||||||||| ||||||| |||||| ||   |||||||||||||| ||    
T  43958200 aaaagtaacatgtttgcattggtttcagtaatattttgacttttaaaaaattaaatttatcatttttcacaattttctaatactatatttctatttttat 43958101  T
Q  255 ccacttatccaatg 268  Q
    |  |||||||||||    
T  43958100 cgccttatccaatg 43958087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 46042752 - 46042816
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttc 231  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||    
T  46042752 tttgcattggtttcaacaacatttagactttaaaaaagttaaatttataacttttcaccattttc 46042816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 30388779 - 30388702
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 230  Q
    |||||||||| || |||  |||| |||||| || |||||||||||||||||||||||||||||| |||||||||||||    
T  30388779 tcaaaagtagtatgtttatattgatttcaataatattttgacttttaaaaagttaaatttatcatttttcaccatttt 30388702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 732 - 785
Target Start/End: Original strand, 40763938 - 40763991
Alignment:
Q  732 gaagcagagaggttggagaaggaactgatacagaatcctcctcctactgaatct 785  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  40763938 gaagcagaaaggttggagaaggaacagatacagaatcctcctcctactgaatct 40763991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 10575878 - 10575802
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattt 229  Q
    |||||||||| |||||| |||||  |||||||| |||| || |||||||||||||||||| ||||||||||||||||    
T  10575878 tcaaaagtagtatattttcattgaattcaacaatatttggagttttaaaaagttaaatttttcacttttcaccattt 10575802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 166 - 254
Target Start/End: Original strand, 32204185 - 32204273
Alignment:
Q  166 atttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    ||||||||||  ||||| || ||||| ||||||||||||||||||| ||||||||||| |||||| ||| |  ||||||||||||||||    
T  32204185 atttgcattgtattcaaaaatattttaacttttaaaaagttaaattcatcacttttcatcatttttcaatgcaatatttctattttcat 32204273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 40763205 - 40763275
Alignment:
Q  24 gaattaagatacatctttattggaaattaccaaatactttatggtttcaaaagtagcatatttgcattggtttcaacaacatt 106  Q
    ||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||    
T  40763205 gaattaagatacatctttattggaaattaccaaata------------aaaagtagcatatttgcattggtttcaacaacatt 40763275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 154 - 250
Target Start/End: Complemental strand, 18529271 - 18529175
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattt 250  Q
    ||||| |||||| |||||| | | |||||||||||||||||||  ||||| ||||||| |||||||||||||||||   ||| | ||||||||||||    
T  18529271 caaaattagcatgtttgcaatagattcaacaacattttgacttgaaaaaaattaaattcatcacttttcaccatttcataacataatatttctattt 18529175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 44297019 - 44296945
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatt 228  Q
    |||||||||||  ||| |||||| |||||| | ||||| ||||||||||| ||||||| ||||||||||||||||    
T  44297019 caaaagtagcaggtttacattggattcaacgatattttaacttttaaaaacttaaattcatcacttttcaccatt 44296945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 6548520 - 6548601
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    |||||||||| |  |||||||||| | |||||| ||||| ||||||||||||||||||| |||| |||||||| ||| ||||    
T  6548520 tcaaaagtagtaagtttgcattggatccaacaatattttaacttttaaaaagttaaattcatcatttttcaccgtttcccaa 6548601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 16082550 - 16082473
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttc 231  Q
    ||||||||| || |||||||||| |||||||| |  || |||||||||| |||||||| |||| ||||||||||||||    
T  16082550 caaaagtagtatgtttgcattggattcaacaataacttaacttttaaaacgttaaattcatcaattttcaccattttc 16082473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 48879660 - 48879741
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    ||||||||||||||||| ||||   |||||||| ||||| ||||||||||| |||||||  ||||||||||| |||| ||||    
T  48879660 tcaaaagtagcatatttacattaaattcaacaatattttaacttttaaaaaattaaattcttcacttttcactatttcccaa 48879741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 4686127 - 4686085
Alignment:
Q  188 ttttgacttttaaaaagttaaatttatcacttttcaccatttt 230  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  4686127 ttttaacttttaaaaagttaaattaatcacttttcaccatttt 4686085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 7323072 - 7323036
Alignment:
Q  70 tcaaaagtagcatatttgcattggtttcaacaacatt 106  Q
    ||||||||||||| |||||||||||||||||||||||    
T  7323072 tcaaaagtagcatgtttgcattggtttcaacaacatt 7323036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 16931906 - 16931961
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    |||||||| |||||||||||||||||||||||||  |||||||| || |||||||||    
T  16931906 ttcaacaatattttgacttttaaaaagttaaattattcactttt-actattttccaa 16931961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 16937289 - 16937344
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    |||||||| |||||||||||||||||||||||||  |||||||| || |||||||||    
T  16937289 ttcaacaatattttgacttttaaaaagttaaattattcactttt-actattttccaa 16937344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 22521576 - 22521612
Alignment:
Q  70 tcaaaagtagcatatttgcattggtttcaacaacatt 106  Q
    ||||||||||||| |||||||||||||||||||||||    
T  22521576 tcaaaagtagcatgtttgcattggtttcaacaacatt 22521612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 35003637 - 35003673
Alignment:
Q  195 ttttaaaaagttaaatttatcacttttcaccattttc 231  Q
    ||||||||||||||||| |||||||||||||||||||    
T  35003637 ttttaaaaagttaaattaatcacttttcaccattttc 35003673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 40774336 - 40774264
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattt 250  Q
    |||| ||| ||||| ||||||||||||||||||| |||| |||||| |||||| ||| |  ||||||||||||    
T  40774336 ttcatcaatattttaacttttaaaaagttaaattcatcaattttcatcatttttcaatgcaatatttctattt 40774264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 5543061 - 5543112
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattt 229  Q
    ||||||||  |||| ||||||||||||| |||| ||||||||||||||||||    
T  5543061 ttcaacaattttttaacttttaaaaagtcaaatatatcacttttcaccattt 5543112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 24359826 - 24359791
Alignment:
Q  71 caaaagtagcatatttgcattggtttcaacaacatt 106  Q
    |||||||||||| |||||||||||||||||||||||    
T  24359826 caaaagtagcatgtttgcattggtttcaacaacatt 24359791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 29687467 - 29687502
Alignment:
Q  71 caaaagtagcatatttgcattggtttcaacaacatt 106  Q
    |||||||||||| |||||||||||||||||||||||    
T  29687467 caaaagtagcatgtttgcattggtttcaacaacatt 29687502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 41141040 - 41141095
Alignment:
Q  179 tcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    |||||||  |||||| ||||||||||||||||| |  |||||||||||||||||||    
T  41141040 tcaacaattttttgatttttaaaaagttaaattaacaacttttcaccattttccaa 41141095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 40194818 - 40194852
Alignment:
Q  72 aaaagtagcatatttgcattggtttcaacaacatt 106  Q
    ||||||||||| |||||||||||||||||||||||    
T  40194818 aaaagtagcatgtttgcattggtttcaacaacatt 40194852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 43189731 - 43189685
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcac 224  Q
    |||||||| ||||| ||||||||||||| ||||| ||||||||||||    
T  43189731 ttcaacaatattttaacttttaaaaagtcaaattcatcacttttcac 43189685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 3720198 - 3720157
Alignment:
Q  188 ttttgacttttaaaaagttaaatttatcacttttcaccattt 229  Q
    |||| |||||||||||||||||||||||| ||| ||||||||    
T  3720198 ttttaacttttaaaaagttaaatttatcattttacaccattt 3720157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 29247938 - 29248010
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 251  Q
    ||||||||  ||||||||||||||||||| ||||  |||||||||| | |||||||| || || ||||||||||    
T  29247938 ttcaacaatgttttgacttttaaaaagtt-aattcttcacttttcatcgttttccaatgtaatgtttctatttt 29248010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 514 - 782
Target Start/End: Original strand, 42911328 - 42911596
Alignment:
Q  514 aattgatttatgcttctgaagctagtacattttatgcatgttattattgggtggtgtgaatgcagatatctgctgttgctcggattgggaatgctcttgc 613  Q
    ||||||||||||||||||||||||||  ||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||| |||||||||||||    
T  42911328 aattgatttatgcttctgaagctagtgaattttatgcatgttactattgggtgatatgaatgcagatatctgctgttgctcggattcggaatgctcttgc 42911427  T
Q  614 ttatgctacacatacatttttcaacaagcatgggtttctttatgtgcgcacgccaattgtcacgacaagtgattgtgagggtgctggtgaaatgtttcaa 713  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42911428 ttatgctacacatacatttttcaacaagcatgggtttctttatgtgcacacgccaattgtcacgactagtgattgtgagggtgctggtgaaatgtttcaa 42911527  T
Q  714 gtgacaactctgttcagtgaagcagagaggttggagaaggaactgatacagaatcctcctcctactgaa 782  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42911528 gtgacaactttgttcagtgaagcagagaggttggagaaggaactgatacagaatcctcctccaactgaa 42911596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 153 - 294
Target Start/End: Complemental strand, 21016176 - 21016035
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||| ||||||||||||||||     
T  21016176 tcaaaagtagcatgtttgcattggcttcaacaacattttgacttttaaaaagttaaatctatcacttttaaccatttttcaatgttatatttctattttt 21016077  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||| ||||||||| ||||||  | |||||||||||||||||    
T  21016076 atccccttatccaaagcctcaaaggcaatggttagcattctc 21016035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 157 - 294
Target Start/End: Original strand, 6939152 - 6939289
Alignment:
Q  157 aagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatcc 256  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||| |||     
T  6939152 aagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttgtcaccatttttcaatgttatatttctatttttatct 6939251  T
Q  257 acttatccaatgcctcacggacaatggttagcattctc 294  Q
      |||| ||||||| || ||||||||||||||||||||    
T  6939252 cattattcaatgccccatggacaatggttagcattctc 6939289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 153 - 294
Target Start/End: Complemental strand, 19389429 - 19389288
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||| ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||||     
T  19389429 tcaaaagtagcatgtttgcattgttttcaacgatattttgacttttaaaaagttaaatttatcacttttcacaattttccaatactatatttctattttt 19389330  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||| ||||||||||||| || || |||||||||||||||||    
T  19389329 atccccttatccaatgccccaagggcaatggttagcattctc 19389288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 45337995 - 45338135
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||||||| || ||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||| |    
T  45337995 caaaagtagtatgtttgcattggtctcaataacattttgatttttaaaaagttaaatttatcatttttcaccatttttcaatgttatatttctattttta 45338094  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| |||||||||||||  | ||||||||||||||||||||    
T  45338095 tccccttatccaatgcccaaaggacaatggttagcattctc 45338135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 153 - 294
Target Start/End: Original strand, 4989926 - 4990064
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||| |||||||||||||||||   |||||||| ||||||||||||||||||||| ||||||| ||||||||| | ||||||||||||||     
T  4989926 tcaaaagtagcatgtttgcattggtttcaac---attttgacatttaaaaagttaaatttatcatttttcactattttccaatgctatatttctattttt 4990022  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||| ||||||||||||  || |||||||| |||||||||||    
T  4990023 atccccttatccaatgctacaaggacaatgattagcattctc 4990064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 155 - 262
Target Start/End: Complemental strand, 26195490 - 26195383
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    ||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||    
T  26195490 aaaagtagcatgtttgtattggtttcaacaacattttaacttttaaaaagttaaatttatcacttttcacaattttccaatgttatatttctatttttat 26195391  T
Q  255 ccacttat 262  Q
    || |||||    
T  26195390 ccccttat 26195383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 162 - 291
Target Start/End: Original strand, 21016233 - 21016362
Alignment:
Q  162 gcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccactta 261  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||  ||||||||||||||| |||| ||||    
T  21016233 gcatgtttgcattggcttcaacaacattttgacttttaaaaagttaaatctatcacttttcaccatttttcaatattatatttctatttttatcccctta 21016332  T
Q  262 tccaatgcctcacggacaatggttagcatt 291  Q
    ||||| ||| ||  | ||||||||||||||    
T  21016333 tccaaagccccaaaggcaatggttagcatt 21016362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 160 - 268
Target Start/End: Complemental strand, 25249453 - 25249345
Alignment:
Q  160 tagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccact 259  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||| | || ||    
T  25249453 tagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttttatttttaccccct 25249354  T
Q  260 tatccaatg 268  Q
    |||||||||    
T  25249353 tatccaatg 25249345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 359 - 516
Target Start/End: Original strand, 42910826 - 42910974
Alignment:
Q  359 tgaaacatcaatttcgtttttgaaaatgtagagtcaaacaattacatccttaaaattaacaaaatttagaaatgatctctaaaattcatacttccctgtc 458  Q
    |||| ||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| |||||||||||||        |||||||||||    
T  42910826 tgaaccatcaatttcgtttttgaaaatgtagagttaaacaattccatcctt-aaattaacaaaattttgaaatgatctcta--------acttccctgtc 42910916  T
Q  459 tcacgtgtcccttagagacaaattcaaaaactaaattgatcaatccaaatagactaat 516  Q
    |||  ||| ||||  |||||| ||||||||||||||||||||||||||||||| ||||    
T  42910917 tcatatgttccttcaagacaatttcaaaaactaaattgatcaatccaaatagattaat 42910974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 167 - 268
Target Start/End: Original strand, 8018765 - 8018866
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 266  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||| |||||||||    
T  8018765 tttgcattagttttaacaacattttgatttttaaaaagttaaatttatcacttttcaccattttccaatattatatttctatttttatccccttatccaa 8018864  T
Q  267 tg 268  Q
    ||    
T  8018865 tg 8018866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 154 - 263
Target Start/End: Original strand, 18068953 - 18069062
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||||||  || |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |    
T  18068953 caaaagtataatgtttgcattagtttcaacaacattttgacctttaaaaagttaaatttatcacttttcaccattttccaatgctatatttctattttta 18069052  T
Q  254 tccacttatc 263  Q
    ||| ||||||    
T  18069053 tccccttatc 18069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 10694798 - 10694938
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||   ||||||| |||||| |    
T  10694798 caaaagtatcatatttgcattgatttcaacaacattttgacttttaaaaagttaaatttatcactttttaccatttttaaatactatatttttattttaa 10694897  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| |||||||||| |  || ||| |||| |||||||||||    
T  10694898 tccccttatccaatacaccaaggataatgattagcattctc 10694938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 26672799 - 26672920
Alignment:
Q  172 attggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcct 271  Q
    |||||||||||||||||||||||||||||||| |||||||||||  |||| | |||||||||| | |||||||||||||| ||||  ||||||||| ||     
T  26672799 attggtttcaacaacattttgacttttaaaaaattaaatttatccttttttatcattttccaatgctatatttctatttttatccctttatccaatacc- 26672897  T
Q  272 cacggacaatggttagcattctc 294  Q
    || ||||||||||||||||||||    
T  26672898 caaggacaatggttagcattctc 26672920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 155 - 267
Target Start/End: Original strand, 37433258 - 37433369
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    |||||||| || ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| ||| ||||||| || ||||| ||    
T  37433258 aaaagtagtatgtttgcattggtttcaacaacattttaacttt-aaaaagttaaatttatcacttttcatcatttttcaatgttatatgtcgatttttat 37433356  T
Q  255 ccacttatccaat 267  Q
    || ||||||||||    
T  37433357 ccccttatccaat 37433369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 153 - 292
Target Start/End: Complemental strand, 34714040 - 34713899
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttcca--acgttatatttctattt 250  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||| ||  ||  ||||| |||||||    
T  34714040 tcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaagaagtgaaatttatcactttgcaccatttttcaatactatatatatctattt 34713941  T
Q  251 tcatccacttatccaatgcctcacggacaatggttagcattc 292  Q
    | |||| ||||| ||||    |  ||||||||||||||||||    
T  34713940 ttatccccttattcaatattcctaggacaatggttagcattc 34713899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 3174447 - 3174589
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattt----tgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatt 249  Q
    |||||||||||| |||| |||||||||||||||||||    ||||||||||||||| |||||||| | |||||||||||||||||  | |||||||||||    
T  3174447 caaaagtagcatgtttgtattggtttcaacaacatttattttgacttttaaaaagtcaaatttataatttttcaccattttccaatataatatttctatt 3174546  T
Q  250 ttcatccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    || |||| || |||||| |||  |  |||||||||||||||||||    
T  3174547 tttatcccctcatccaacgcccta--gacaatggttagcattctc 3174589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 44874324 - 44874456
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| ||||||||||||||||||||        ||||||||| |||||||||||||||||||||||||| ||| ||||||||| |||||| |    
T  44874324 caaaagtagcatgtttgcattggtttcaacaac--------ttttaaaaatttaaatttatcacttttcaccatttttcaatgttatatttatattttta 44874415  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| |||||||||||| |||  ||||||  |||| ||||||    
T  44874416 tccccttatccaatgcttcaaagacaataattagaattctc 44874456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 152 - 294
Target Start/End: Complemental strand, 5129582 - 5129434
Alignment:
Q  152 ttcaaaagtagcatatttgcattggtt------tcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttc 245  Q
    ||||||||||||||||||| |||||||      | | ||||||||||||||||||||| ||||||||||||||||||| |||||| ||| | ||||||||    
T  5129582 ttcaaaagtagcatatttgtattggttaacattttatcaacattttgacttttaaaaaattaaatttatcacttttcatcatttttcaatgctatatttc 5129483  T
Q  246 tattttcatccacttatccaatgcctcacggacaatggttagcattctc 294  Q
     ||||| |||| |||||| |||||   | || |||||||||||||||||    
T  5129482 aatttttatccccttatcaaatgctctaagggcaatggttagcattctc 5129434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 6433535 - 6433643
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||||||| || ||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||| |||||||| ||| | ||||||| |||||| |    
T  6433535 caaaagtagtatctttgcattggttttaacaatattttaacttttaaaaagttaaatttataactttttaccatttttcaatgctatatttttattttta 6433634  T
Q  254 tccacttat 262  Q
    | |||||||    
T  6433635 ttcacttat 6433643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 33741593 - 33741523
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttca 223  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  33741593 tcaaaagtaacatatttgcattggtttcaacaatattttaacttttaaaaagttaaatttatcatttttca 33741523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 14855502 - 14855394
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| |||||||| |||| ||||||||||| |||||||||| |||||||||||| |||||||| |||||  ||   |||||||||||||| |    
T  14855502 caaaagtagcatgtttgcattagttttaacaacattttaacttttaaaatgttaaatttatctcttttcactattttttaatactatatttctattttta 14855403  T
Q  254 tccacttat 262  Q
    ||| |||||    
T  14855402 tccccttat 14855394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 261
Target Start/End: Original strand, 26892799 - 26892884
Alignment:
Q  176 gtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccactta 261  Q
    ||||||| || ||||| |||||||||||||||||||||||| |||| || ||||| |||  ||||||||||||||| |||| ||||    
T  26892799 gtttcaataatattttaacttttaaaaagttaaatttatcattttttacaatttttcaatattatatttctatttttatcctctta 26892884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 267
Target Start/End: Complemental strand, 6396392 - 6396278
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    |||||| ||| ||||||| ||| | |||||||||||||| || ||||||| |||||||| || ||| ||||||||||| ||||   |||||| |||||      
T  6396392 tcaaaattagtatatttgtattagattcaacaacattttaacgtttaaaatgttaaattcattactcttcaccattttacaacacaatatttttatttat 6396293  T
Q  253 atccacttatccaat 267  Q
    ||||||||| |||||    
T  6396292 atccacttaaccaat 6396278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 20212507 - 20212433
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatt 228  Q
    |||||||||||  ||| |||||| |||||| | ||||| ||||||||||| ||||||| ||||||||||||||||    
T  20212507 caaaagtagcaggtttacattggattcaacgatattttaacttttaaaaacttaaattcatcacttttcaccatt 20212433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 7532815 - 7532892
Alignment:
Q  193 acttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcc 270  Q
    |||||||||||  |||||| ||||||||||||||||||||||    ||||||||||||| |||| |||| ||||||||    
T  7532815 acttttaaaaacctaaattcatcacttttcaccattttccaatacaatatttctatttttatccccttaaccaatgcc 7532892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 251
Target Start/End: Original strand, 38869995 - 38870092
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 251  Q
    ||||||||| |||||| |||||  |||| ||| |||||||||||||||| ||| ||||  |||||||||| |||||||||| |  || ||||||||||    
T  38869995 caaaagtagtatatttacattgaattcatcaatattttgacttttaaaatgttgaattcttcacttttcatcattttccaatgcaatgtttctatttt 38870092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 294
Target Start/End: Original strand, 35930168 - 35930267
Alignment:
Q  195 ttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||||||||||||||||||| | |||||| |||||| |||   ||||||| |||||| |||  ||||||||||||  || || ||||||||| |||||||    
T  35930168 ttttaaaaagttaaatttattatttttcatcatttttcaatactatatttttatttttatcttcttatccaatgctccaagggcaatggttatcattctc 35930267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 37923046 - 37922972
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 230  Q
    |||||||| || |||||||||| ||||| || |||||||||| |||||||||||||| || |||||| ||||||||    
T  37923046 aaaagtagtatgtttgcattggattcaataatattttgacttctaaaaagttaaattcattactttt-accatttt 37922972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 31596512 - 31596442
Alignment:
Q  181 aacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 251  Q
    ||||| ||||||||||||||||||| ||||| |||| |||||||||||||  |||   |||||||||||||    
T  31596512 aacaatattttgacttttaaaaagtaaaattcatcatttttcaccattttttaacacaatatttctatttt 31596442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 11332909 - 11332796
Alignment:
Q  157 aagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatcc 256  Q
    |||||| ||||||  ||||  ||||||||  ||||||||||||||||||||||||  ||||||| ||||||||  |||    ||||||||||||| |||     
T  11332909 aagtagtatatttatattgaattcaacaatgttttgacttttaaaaagttaaattcttcactttacaccatttctcaatacaatatttctatttttatct 11332810  T
Q  257 acttatccaatgcc 270  Q
     |||| ||||||||    
T  11332809 tcttaaccaatgcc 11332796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 34714040 - 34714004
Alignment:
Q  70 tcaaaagtagcatatttgcattggtttcaacaacatt 106  Q
    ||||||||||||| |||||||||||||||||||||||    
T  34714040 tcaaaagtagcatgtttgcattggtttcaacaacatt 34714004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 39972270 - 39972190
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    ||||| ||| || |||||||||  || |||||  |||| ||||||||||||| ||||| ||||||||||||||||| ||||    
T  39972270 caaaaatagtatgtttgcattgaattgaacaattttttaacttttaaaaagtcaaattcatcacttttcaccatttcccaa 39972190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 30351595 - 30351637
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaa 209  Q
    |||||||||| |||||||| ||||| |||||||||||||||||    
T  30351595 tttgcattggattcaacaatattttaacttttaaaaagttaaa 30351637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 11295548 - 11295507
Alignment:
Q  188 ttttgacttttaaaaagttaaatttatcacttttcaccattt 229  Q
    |||||||||||||||||||||||| |||| |||||| |||||    
T  11295548 ttttgacttttaaaaagttaaattcatcatttttcatcattt 11295507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 17320045 - 17320000
Alignment:
Q  181 aacaacattttgacttttaaaaagttaaatttatcacttttcacca 226  Q
    ||||| ||||| ||||||||||||||||||| ||| ||||||||||    
T  17320045 aacaatattttaacttttaaaaagttaaattcatctcttttcacca 17320000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 42910722 - 42910759
Alignment:
Q  24 gaattaagatacatctttattggaaattaccaaatact 61  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  42910722 gaattaagatgcatctctattggaaattaccaaatact 42910759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 144
Target Start/End: Original strand, 42910722 - 42910759
Alignment:
Q  107 gaattaagatacatctttattggaaattaccaaatact 144  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  42910722 gaattaagatgcatctctattggaaattaccaaatact 42910759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 5e-52; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 34874558 - 34874698
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||| |    
T  34874558 caaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccattttccaatgctatatttctattttta 34874657  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| ||||||||||||| || || |||||||||||||||||    
T  34874658 tccccttatccaatgccccaagggcaatggttagcattctc 34874698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 27209836 - 27209696
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |    
T  27209836 caaaagtaggatgtttgcattggtttcaacaacattttaacttttaaaaagttaaatttatcaattttcaccattttccaatgttatatttctattttta 27209737  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||  |||||||||||| || ||||||||||||||||||||    
T  27209736 tccctttatccaatgccccaaggacaatggttagcattctc 27209696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 153 - 294
Target Start/End: Complemental strand, 28851025 - 28850885
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  28851025 tcaaaagtagcatatttgcattggtttcaacaat-ttttgacttttaaaaagttaaatttatcacttttcaccattttccaatgttatatttctattttt 28850927  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    || | |||||| |||||| || || |||||||||||||||||    
T  28850926 attctcttatctaatgccccaagggcaatggttagcattctc 28850885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 153 - 294
Target Start/End: Complemental strand, 41147594 - 41147453
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||| |||| |||||||| ||| | ||||||||||||||     
T  41147594 tcaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaattaatcattttttaccatttttcaatgctatatttctattttt 41147495  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||| ||||||||||||| || ||||||||||||||||||||    
T  41147494 atccccttatccaatgccccaaggacaatggttagcattctc 41147453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 11385972 - 11386112
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| | |||||||||||||| |    
T  11385972 caaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcaatttttaccattttccaatgctatatttctattttta 11386071  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||| ||||| |||| | || |||||||||| |||||||||    
T  11386072 tccaattatctaatgtcccaaggacaatggtgagcattctc 11386112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 47655486 - 47655346
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | |||| ||||||||| |    
T  47655486 caaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcaattttcaccatttttcaatgctatacttctattttta 47655387  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| ||||| ||||| || | || |||||||||||||||||    
T  47655386 tccccttattcaatgtcttaagggcaatggttagcattctc 47655346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 154 - 291
Target Start/End: Complemental strand, 49508848 - 49508712
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||| |    
T  49508848 caaaagtagcatgtttgcattggtttcgacaatattttgacttttaaaaagttaaatttatcac-tttcaccattttccaatgctatatttctattttta 49508750  T
Q  254 tccacttatccaatgcctcacggacaatggttagcatt 291  Q
    ||| ||||||||||||| || || ||||||||| ||||    
T  49508749 tccccttatccaatgccccaagggcaatggttaacatt 49508712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 22346352 - 22346212
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||   |||||||||||||| |    
T  22346352 caaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaaattaaatttatcacttttcaccatttttcaatactatatttctattttta 22346253  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    | | ||||||||| ||| || || |||||||||||||||||    
T  22346252 ttcccttatccaaagccccaagggcaatggttagcattctc 22346212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 33929957 - 33930097
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| | ||||||| |||||| |    
T  33929957 caaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcagttttcactatttttcaatgctatatttatattttta 33930056  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| ||||||||||  ||||  ||||||||||| |||||||    
T  33930057 tccccttatccaatatctcaaagacaatggttaacattctc 33930097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 42607438 - 42607299
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | ||||||| |||||| ||    
T  42607438 aaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcatttttcaccatttttcaatgctatatttttatttttat 42607339  T
Q  255 ccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    || |||||||||| ||  | || ||||||||| |||||||    
T  42607338 ccccttatccaataccctaagggcaatggttaacattctc 42607299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 153 - 294
Target Start/End: Complemental strand, 2125823 - 2125682
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||| |||  ||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||| | ||||||||||||||     
T  2125823 tcaaaagtaacatggttgtatttgtttcatcaacattttgacttttaaaaagttaaatttatcacttttcacaatttttcaatgctatatttctattttt 2125724  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||| ||||||||||||| || | ||||||||||||||||||    
T  2125723 atccccttatccaatgccccaagaacaatggttagcattctc 2125682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 171 - 294
Target Start/End: Complemental strand, 11385908 - 11385785
Alignment:
Q  171 cattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcc 270  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||   |||||||||||||| |||| ||||||||||||     
T  11385908 cattggtttcaacaacattttgacttttaaaaagttaaatttataacttttcaccattttccaatactatatttctatttttatccccttatccaatgct 11385809  T
Q  271 tcacggacaatggttagcattctc 294  Q
     || || ||||||| |||||||||    
T  11385808 gcaagggcaatggtcagcattctc 11385785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 932271 - 932135
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||| | |||||| |||||||||| | |||||||||||||| ||    
T  932271 aaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaaattaaatttataatttttcatcattttccaatgctatatttctatttttat 932172  T
Q  255 ccacttatccaatgcctcacggacaatggttagcatt 291  Q
    || ||||||||||||| || | |||||| ||| ||||    
T  932171 ccccttatccaatgccccaagaacaatgattaacatt 932135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 24140764 - 24140903
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||   |||||||||||||| |    
T  24140764 caaaaatagcatgtttgcattggtttcaacaacattttgactttaaaaaagttaagtttatcacgtttcaccattttccaatagtatatttctattttta 24140863  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| ||||| ||||||| ||  | |||||||||||||||||    
T  24140864 tccccttat-caatgccccaaaggcaatggttagcattctc 24140903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 170 - 294
Target Start/End: Complemental strand, 32213988 - 32213864
Alignment:
Q  170 gcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgc 269  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| |||| |||||| ||||     
T  32213988 gcattggtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccattttccaatgttctatttctatttttatccccttatctaatgt 32213889  T
Q  270 ctcacggacaatggttagcattctc 294  Q
    | || |  |||||||||| ||||||    
T  32213888 cccaagagcaatggttagtattctc 32213864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 154 - 269
Target Start/End: Complemental strand, 4940855 - 4940740
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||| |||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||| |    
T  4940855 caaaaatagcatgtttgtattggttttaacaatattttgacttttaaaaagttaaatttatcacttttaaccattttccaatgctatatttctattttta 4940756  T
Q  254 tccacttatccaatgc 269  Q
    ||| ||||||||||||    
T  4940755 tccccttatccaatgc 4940740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 7190589 - 7190450
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    ||||||||||| |||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||  || | |||||||||||||| ||    
T  7190589 aaaagtagcatgtttgcattagtttcaacaccattttaacttttaaaaagttaaatttatcacttttcatcatttttgaatgctatatttctatttttat 7190490  T
Q  255 ccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    || |||| |||||||| || || ||| |||||||||||||    
T  7190489 cctcttaaccaatgccccaagggcaaaggttagcattctc 7190450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 49901917 - 49902030
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||| ||| |||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||   |||||||||||||| |    
T  49901917 caaaagtatcatgtttgcattggtttcaacaacgttttaacgtttaaaaagttaaatttatcacttttcaccattttccaatactatatttctattttta 49902016  T
Q  254 tccacttatccaat 267  Q
    ||| ||||||||||    
T  49902017 tcctcttatccaat 49902030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 153 - 273
Target Start/End: Complemental strand, 6170667 - 6170547
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||| | ||||||||||||||     
T  6170667 tcaaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcatttttctctattttccaatgctatatttctattttt 6170568  T
Q  253 atccacttatccaatgcctca 273  Q
    |||   ||||||||| |||||    
T  6170567 atctctttatccaatacctca 6170547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 167 - 291
Target Start/End: Original strand, 40845255 - 40845379
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 266  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||   |||||||||||||| |||| ||||| |||    
T  40845255 tttgctttggtttcaacaatattttgatttttaaaaagttaaatttatcacttttcaccatttttcaatactatatttctatttttatccccttattcaa 40845354  T
Q  267 tgcctcacggacaatggttagcatt 291  Q
    || |||| || ||||||||||||||    
T  40845355 tgtctcaagggcaatggttagcatt 40845379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 43433766 - 43433906
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||||||| || |||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||   |||||||||||||| |    
T  43433766 caaaagtagtatgtttgtattggtttcaacaacattttaatttttaaaaagttaaatttatcacttttcaccattttttaatactatatttctattttta 43433865  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| ||||||||||||| || |  |||| ||||||||||||    
T  43433866 tccccttatccaatgccccaagagcaatagttagcattctc 43433906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 153 - 267
Target Start/End: Complemental strand, 28277598 - 28277484
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||| ||| ||||||||| ||||||||||||||| | ||||||||||||||||||||||||||| | |||||| ||| ||||||||||||||||     
T  28277598 tcaaaagtaacatgtttgcattgttttcaacaacattttaatttttaaaaagttaaatttatcactttttatcatttttcaatgttatatttctattttt 28277499  T
Q  253 atccacttatccaat 267  Q
    |||| ||||||||||    
T  28277498 atcctcttatccaat 28277484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 50295550 - 50295432
Alignment:
Q  153 tcaaaagtagcatattt-gcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 251  Q
    ||||||||||||| ||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||||    
T  50295550 tcaaaagtagcatgttttgcattgatttcaacaatattttgacttttaaaaagttaaatttatcacttttcactattttccaatactatatttctatttt 50295451  T
Q  252 catccacttatccaatgcc 270  Q
     | || |||||||||||||    
T  50295450 tacccccttatccaatgcc 50295432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 153 - 294
Target Start/End: Original strand, 29966812 - 29966954
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcacttttcaccattttccaacgttatatttctatttt 251  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| |||||  |||||||||||| ||||  ||||||| ||| | ||||||| ||||||    
T  29966812 tcaaaagtagcatgtttgcattggtttcaacaatattttgactttaaaaaaaattaaatttatcattttttgccatttttcaatgctatatttatatttt 29966911  T
Q  252 catccacttatccaatgcctcacggacaatggttagcattctc 294  Q
     |||| ||||||||||||  || |||||||||||| |||||||    
T  29966912 tatccccttatccaatgctccaaggacaatggttaacattctc 29966954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 155 - 272
Target Start/End: Original strand, 52396435 - 52396551
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    |||| |||||| |||||||| ||||||| || ||||||||||||||||||||||||||||||||||| | |||||| |||   |||||||||||||| ||    
T  52396435 aaaaatagcatgtttgcatttgtttcaataatattttgacttttaaaaagttaaatttatcactttt-atcatttttcaatactatatttctatttttat 52396533  T
Q  255 ccacttatccaatgcctc 272  Q
    || |||||||||||||||    
T  52396534 ccccttatccaatgcctc 52396551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 167 - 294
Target Start/End: Original strand, 31975491 - 31975618
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 266  Q
    |||||||| |||| ||||| ||||||| ||||||||||||||||||| ||||||| | |||||| ||| |||||||||||||||  |||   ||||||||    
T  31975491 tttgcattagttttaacaatattttgatttttaaaaagttaaatttaccactttttatcatttttcaatgttatatttctatttatatctctttatccaa 31975590  T
Q  267 tgcctcacggacaatggttagcattctc 294  Q
    | ||||| || |||||||||||||||||    
T  31975591 tacctcaagggcaatggttagcattctc 31975618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 153 - 294
Target Start/End: Original strand, 45721745 - 45721882
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||| ||||||||| ||| ||||   |||||| |||||||||||||||||||||| |||| |||||||||||| ||||||||| ||||||     
T  45721745 tcaaaagtagcatgtttgcattgattttaaca---ttttgatttttaaaaagttaaatttatcagtttttaccattttccaatgttatatttttattttt 45721841  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||  ||||||||||||  || || ||||||||||| |||||    
T  45721842 atcaccttatccaatgctccaagg-caatggttagccttctc 45721882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 167 - 268
Target Start/End: Original strand, 4656020 - 4656121
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 266  Q
    |||||||| |||||||||||||||| | ||||||||||||||||||||||||||| || ||||||||| ||||||||| |||||| ||   |||||||||    
T  4656020 tttgcattagtttcaacaacattttaatttttaaaaagttaaatttatcactttttactattttccaatgttatatttttatttttatttccttatccaa 4656119  T
Q  267 tg 268  Q
    ||    
T  4656120 tg 4656121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 5945447 - 5945551
Alignment:
Q  190 ttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcacggacaatggttagca 289  Q
    |||||||||||||||| |||||||||||||||||||||||| ||| || ||||||||||||| ||    |||||||||||  || |||||||||||||||    
T  5945447 ttgacttttaaaaagtaaaatttatcacttttcaccatttttcaatgtcatatttctatttttatttcgttatccaatgctccaaggacaatggttagca 5945546  T
Q  290 ttctc 294  Q
    |||||    
T  5945547 ttctc 5945551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 154 - 251
Target Start/End: Original strand, 50154464 - 50154561
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 251  Q
    |||||||| ||| ||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| | |||||| ||| | ||||||| ||||||    
T  50154464 caaaagtaacatgtttgcattggtttcaacaacattttaacttttaaaaggttaaatttatcattttttatcatttttcaatgctatatttatatttt 50154561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 155 - 267
Target Start/End: Complemental strand, 26469696 - 26469584
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    |||||||| || ||| |||||||||||| || |||||||||||||||||||||||||||||| ||||||  ||||| ||| | ||||||| |||||| ||    
T  26469696 aaaagtagtatgttttcattggtttcaataatattttgacttttaaaaagttaaatttatcatttttcattatttttcaatgctatatttttatttttat 26469597  T
Q  255 ccacttatccaat 267  Q
    ||  |||||||||    
T  26469596 ccctttatccaat 26469584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 47895325 - 47895401
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 230  Q
    |||||||| ||| |||||||| |||||||||| |||||||| |||||||||||||||||||||| ||||||||||||    
T  47895325 caaaagtaacatgtttgcattagtttcaacaatattttgacatttaaaaagttaaatttatcacctttcaccatttt 47895401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 30222613 - 30222689
Alignment:
Q  156 aaagtagcatatttgcattggtttcaacaacattttgac-ttttaaaaagttaaatttatcacttttcaccattttc 231  Q
    |||||||||||||||||||||||||||||| ||||| || ||||||||| |||||||||||||||| || |||||||    
T  30222613 aaagtagcatatttgcattggtttcaacaatattttaactttttaaaaaattaaatttatcactttccatcattttc 30222689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 268
Target Start/End: Original strand, 40920188 - 40920292
Alignment:
Q  166 atttgcattggtttcaacaacattttgacttttaaaaagttaaatttat--cacttttcaccattttccaacgttatatttctattttcatccacttatc 263  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||||| ||  |||||||||||| ||  ||| |  ||||||||||||| |||| |||| |    
T  40920188 atttgcattggattcaacaatattttaacttttaaaaagttaaattaatcacacttttcaccacttctcaatgcaatatttctatttttatcctcttaac 40920287  T
Q  264 caatg 268  Q
    |||||    
T  40920288 caatg 40920292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 43168131 - 43168212
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    |||||||||| |||||| |||||  ||||||||  |||||||||||||||||||||| |  |||||||||||||||| ||||    
T  43168131 tcaaaagtagtatatttacattgaattcaacaatgttttgacttttaaaaagttaaactcttcacttttcaccatttcccaa 43168212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 17402963 - 17403015
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 230  Q
    |||||||| ||||||||||||||||||||||||| ||||||||| ||||||||    
T  17402963 ttcaacaatattttgacttttaaaaagttaaattcatcactttttaccatttt 17403015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 294
Target Start/End: Original strand, 44286864 - 44287003
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    ||||||| ||| ||||||||||||| || || ||||| | |||||||||||||||||||||| ||||||| ||| || ||   | ||||| |||||| ||    
T  44286864 aaaagtaacatgtttgcattggttttaataatattttaatttttaaaaagttaaatttatcatttttcactattctctaatactgtatttttatttttat 44286963  T
Q  255 ccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||  ||||  |||||| || ||| ||| ||||||||||||    
T  44286964 ccttttatataatgccccaaggataatagttagcattctc 44287003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 44359787 - 44359712
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattt 229  Q
    ||||| ||| |||||| |||||  ||||||||  ||||||||||||||||||||||||  ||||||||||||||||    
T  44359787 caaaaatagtatatttacattgaattcaacaatgttttgacttttaaaaagttaaattcttcacttttcaccattt 44359712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 48938627 - 48938703
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttc 231  Q
    ||||||||| |||||| ||||   ||||||||  ||||||||||||||||| ||||||| ||||||||||||||||||    
T  48938627 caaaagtagtatatttacattaaattcaacaatgttttgacttttaaaaag-taaatttttcacttttcaccattttc 48938703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 14331828 - 14331908
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    ||||| ||| |||||| |||||  ||||||||  ||||||||||||||||||||||||  ||| |||||||||||| ||||    
T  14331828 caaaaatagtatatttacattgaattcaacaatgttttgacttttaaaaagttaaattcttcatttttcaccatttcccaa 14331908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 271
Target Start/End: Original strand, 41492913 - 41493016
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 266  Q
    ||||||| || |||| ||| ||||| |||||||||| || ||||| |||||||||||||| || |||| |  ||||||||||||| |||| |||| ||||    
T  41492913 tttgcatgggattcatcaatattttaacttttaaaatgtaaaattcatcacttttcaccacttcccaatgcaatatttctatttt-atcctcttaaccaa 41493011  T
Q  267 tgcct 271  Q
    |||||    
T  41493012 tgcct 41493016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 41898950 - 41898898
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 230  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||| ||||||||    
T  41898950 ttcaacaatattttaacttttaaaaagttaaattcatcactttttaccatttt 41898898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 8892885 - 8892806
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    |||||||| ||||||  ||||  || |||||  ||||||||||||||||||||||||  | |||||||||||||||||||    
T  8892885 aaaagtagtatatttatattgaatttaacaatgttttgacttttaaaaagttaaattctttacttttcaccattttccaa 8892806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 51046731 - 51046678
Alignment:
Q  182 acaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaac 235  Q
    ||||| ||||||||||||||||||| |||| | |||||||||||||||| ||||    
T  51046731 acaactttttgacttttaaaaagttgaattcaacacttttcaccatttttcaac 51046678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 249
Target Start/End: Original strand, 894960 - 895016
Alignment:
Q  193 acttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatt 249  Q
    |||||||||||||| |||| |||||||||||| | |||||||| | |||||||||||    
T  894960 acttttaaaaagttgaattcatcacttttcacaactttccaacataatatttctatt 895016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 102
Target Start/End: Complemental strand, 28851025 - 28850993
Alignment:
Q  70 tcaaaagtagcatatttgcattggtttcaacaa 102  Q
    |||||||||||||||||||||||||||||||||    
T  28851025 tcaaaagtagcatatttgcattggtttcaacaa 28850993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 46296276 - 46296240
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttat 214  Q
    |||||||| ||||||||||||||||||||||||||||    
T  46296276 ttcaacaatattttgacttttaaaaagttaaatttat 46296240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 11385972 - 11386007
Alignment:
Q  71 caaaagtagcatatttgcattggtttcaacaacatt 106  Q
    |||||||||||| |||||||||||||||||||||||    
T  11385972 caaaagtagcatgtttgcattggtttcaacaacatt 11386007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 33929957 - 33929992
Alignment:
Q  71 caaaagtagcatatttgcattggtttcaacaacatt 106  Q
    |||||||||||| |||||||||||||||||||||||    
T  33929957 caaaagtagcatgtttgcattggtttcaacaacatt 33929992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 34874558 - 34874593
Alignment:
Q  71 caaaagtagcatatttgcattggtttcaacaacatt 106  Q
    |||||||||||| |||||||||||||||||||||||    
T  34874558 caaaagtagcatgtttgcattggtttcaacaacatt 34874593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 44043500 - 44043547
Alignment:
Q  188 ttttgacttttaaaaagttaaatttatcacttttcaccattttccaac 235  Q
    ||||||||||||||||||||||| |||||||||| |||| ||| ||||    
T  44043500 ttttgacttttaaaaagttaaatatatcactttttaccactttacaac 44043547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 47655486 - 47655451
Alignment:
Q  71 caaaagtagcatatttgcattggtttcaacaacatt 106  Q
    |||||||||||| |||||||||||||||||||||||    
T  47655486 caaaagtagcatgtttgcattggtttcaacaacatt 47655451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 8244128 - 8244195
Alignment:
Q  199 aaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcc 270  Q
    |||||||||||||||||| | |    |||||||||| ||||||||||||| || |||| |||||||||||||    
T  8244128 aaaaagttaaatttatcattat----cattttccaatgttatatttctatatttatccccttatccaatgcc 8244195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 27210750 - 27210792
Alignment:
Q  188 ttttgacttttaaaaagttaaatttatcacttttcaccatttt 230  Q
    |||| ||||||||||||||||||| |||| |||||||||||||    
T  27210750 ttttaacttttaaaaagttaaattgatcatttttcaccatttt 27210792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 474 - 516
Target Start/End: Original strand, 28615743 - 28615785
Alignment:
Q  474 agacaaattcaaaaactaaattgatcaatccaaatagactaat 516  Q
    |||||| ||||||||||||||||||||||| ||| ||||||||    
T  28615743 agacaatttcaaaaactaaattgatcaatctaaagagactaat 28615785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 42607438 - 42607404
Alignment:
Q  72 aaaagtagcatatttgcattggtttcaacaacatt 106  Q
    ||||||||||| |||||||||||||||||||||||    
T  42607438 aaaagtagcatgtttgcattggtttcaacaacatt 42607404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 102
Target Start/End: Original strand, 30222613 - 30222642
Alignment:
Q  73 aaagtagcatatttgcattggtttcaacaa 102  Q
    ||||||||||||||||||||||||||||||    
T  30222613 aaagtagcatatttgcattggtttcaacaa 30222642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 1e-49; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 26040478 - 26040338
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||   |||||||||||||| |    
T  26040478 caaaagtagcatatttgcattggcttcaacaatattttgacttttaaaaagttaaacttatcacttttcaccattttccaatactatatttctattttta 26040379  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| ||||||||||||| || ||||||||||||||||||||    
T  26040378 tccccttatccaatgccccaaggacaatggttagcattctc 26040338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 35808514 - 35808374
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| | |||||||||||||| |    
T  35808514 caaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcatttttcacaattttccaatgctatatttctattttta 35808415  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| ||||||||||||| || || |||||||||||||||||    
T  35808414 tccccttatccaatgccccaagggcaatggttagcattctc 35808374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 41956331 - 41956191
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||| |    
T  41956331 caaaagtagcatgtttgcattggcttcaacaacattttgacttttaaaaagttaaatttatcatttttcatcattttccaatgttatatttctattttta 41956232  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| ||||||| ||||| || || |||||||||||||||||    
T  41956231 tcctcttatccgatgccccaagggcaatggttagcattctc 41956191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 55669730 - 55669870
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||| |    
T  55669730 caaaagtagcatgtttgcattgtttttaacaacattttgacttttaaaaagttaaatttatcatttttcaccattttccaatgctatatttctattttta 55669829  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| ||||||||||||| || || |||||||||||||||||    
T  55669830 tccccttatccaatgccccaagggcaatggttagcattctc 55669870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 167 - 294
Target Start/End: Original strand, 34016629 - 34016756
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 266  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||| |||| |||||||||    
T  34016629 tttgcattgatttcaacaacattttgacttttaaaaagttaaattcatcacttttcaccattttccaatgctatatttctatttttatccccttatccaa 34016728  T
Q  267 tgcctcacggacaatggttagcattctc 294  Q
    || |||| ||||||||||||||||||||    
T  34016729 tgtctcaaggacaatggttagcattctc 34016756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 50514731 - 50514592
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||| |    
T  50514731 caaaagtagcatgtttgcattggtttcaacaacattttaacttttaaaaagttaaatttatcactttttaccatttttcaatgttatatttctatttt-a 50514633  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| ||||||||||| | || |  |||||||||||||||||    
T  50514632 tcctcttatccaatgtcacaagagcaatggttagcattctc 50514592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 155 - 294
Target Start/End: Original strand, 23765570 - 23765709
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||| ||||| ||    
T  23765570 aaaagtagcatgtttgcattggtttcaacaacattttgatttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttcaatttttat 23765669  T
Q  255 ccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    || |||||| |||||  ||  | |||||||||||||||||    
T  23765670 ccccttatctaatgcaccaaaggcaatggttagcattctc 23765709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 154 - 291
Target Start/End: Original strand, 45688734 - 45688871
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| | ||| |||||||||| |    
T  45688734 caaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaagttaaatttatcacttttcatcatttttcaatgctatgtttctattttta 45688833  T
Q  254 tccacttatccaatgcctcacggacaatggttagcatt 291  Q
    ||| |||||||||| || || | |||||||||||||||    
T  45688834 tccccttatccaataccccaagaacaatggttagcatt 45688871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 153 - 294
Target Start/End: Original strand, 31754928 - 31755069
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||   ||||||| ||||||     
T  31754928 tcaaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcatcatttttcaattctatatttatattttt 31755027  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||| |||||||||| || ||  | |||||||||||||||||    
T  31755028 atccccttatccaataccccaatggcaatggttagcattctc 31755069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 34316841 - 34316700
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||| ||| ||||||||| ||||||     
T  34316841 caaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaattttatcacttttcactatttttcaatgttatatttatattttt 34316742  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||  ||||||||||||| || || ||||||| |||||||||    
T  34316741 atctccttatccaatgccccaagggcaatggtgagcattctc 34316700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 153 - 294
Target Start/End: Original strand, 54339103 - 54339243
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||| |||||||||||| ||||||||||||| ||| ||||||||| ||||||     
T  54339103 tcaaaagtagcatatttacattggtttcaaaaatattttgacttttaaaaaattaaatttatca-ttttcaccatttttcaatgttatatttatattttt 54339201  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||||  |||||||||||| ||  |||||||||||||||||||    
T  54339202 atccctttatccaatgccccaacgacaatggttagcattctc 54339243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 20811254 - 20811362
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |    
T  20811254 caaaagtagcatgtttgcattgattttaacaacattttgacttttaaaaagttaaatttatcacttttcaccaatttccaatgttatatttctattttta 20811353  T
Q  254 tccacttat 262  Q
    ||| |||||    
T  20811354 tccccttat 20811362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 153 - 294
Target Start/End: Complemental strand, 26831904 - 26831764
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||| ||||||||| ||||||||||||||| | |||||||||| |||||||||||||||| |||||||| |||  |||||||||||||||     
T  26831904 tcaaaagtagcatgtttgcattg-tttcaacaacattttaatttttaaaaagataaatttatcactttttaccattttacaatattatatttctattttt 26831806  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||| ||||| ||||||| || ||||||| ||||||||||||    
T  26831805 atcctcttattcaatgccccaaggacaattgttagcattctc 26831764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 153 - 294
Target Start/End: Complemental strand, 27839425 - 27839284
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    |||||| |||||| ||||||||||||| || |||||||||||||||||||| |||||||||||| |||||| |||||| ||| | ||||||||||||||     
T  27839425 tcaaaaatagcatgtttgcattggttttaataacattttgacttttaaaaacttaaatttatcatttttcatcatttttcaatgctatatttctattttt 27839326  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    || | ||||||||||||| || || |||||||||||||||||    
T  27839325 attcccttatccaatgccccaagggcaatggttagcattctc 27839284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 153 - 294
Target Start/End: Original strand, 2362619 - 2362762
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaag--ttaaatttatcacttttcaccattttccaacgttatatttctattt 250  Q
    |||||||||| || ||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||||||||   ||||||| |||||    
T  2362619 tcaaaagtagtatgtttgcattggttttaacaacattttgacttttaaaaaaaattaaatttatcacttttcaccattttccaatactatatttttattt 2362718  T
Q  251 tcatccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    | |||| ||||||| ||||| || || |||||||||||||||||    
T  2362719 ttatccccttatccgatgccccaagggcaatggttagcattctc 2362762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 10100231 - 10100091
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||  |||||||| |||||| |    
T  10100231 caaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttataacttttcaccattttctaatattatatttatattttta 10100132  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| ||||||| ||| | || ||||||| |  |||||||||    
T  10100131 tccccttatccgatgtcccaaggacaatagacagcattctc 10100091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 154 - 250
Target Start/End: Complemental strand, 19329046 - 19328950
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattt 250  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||    
T  19329046 caaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacatttcaccattttccaatgctatatttctattt 19328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 153 - 268
Target Start/End: Original strand, 51266914 - 51267029
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||     
T  51266914 tcaaaagtagcatgtttgtattgatttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttttcaatactatatttctattttt 51267013  T
Q  253 atccacttatccaatg 268  Q
    |||  |||||||||||    
T  51267014 atctccttatccaatg 51267029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 155 - 294
Target Start/End: Original strand, 32131134 - 32131273
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    ||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||   |||||||||||||| ||    
T  32131134 aaaagtaacatgtttgcattggtttcaacaacatcttgacttttaaaaagttaaatttatcacttatcaccattttccaatactatatttctatttttat 32131233  T
Q  255 ccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |   ||||||||||   || || ||||||||| |||||||    
T  32131234 ctctttatccaatgttccaagggcaatggttaacattctc 32131273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 31168125 - 31168265
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||||||| || ||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| | || | ||||||||| |    
T  31168125 caaaagtagaatgtttacattggtttcaacaacattttgactttaaaaaaattaaatttatcacttttcaccattttccaatgctaaaattctattttta 31168224  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| ||| || |||||  || || |||| ||||||||||||    
T  31168225 tccccttgtctaatgctccaagggcaatagttagcattctc 31168265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 47188783 - 47188703
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    |||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  47188783 caaaagtagcatgtttgcattggtttcaacaacattttgactttttagaagttaaatttatcacttttcaccattttccaa 47188703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 154 - 292
Target Start/End: Original strand, 30475416 - 30475554
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||||||  || ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||   ||||||| |||||| |    
T  30475416 caaaagtaatatgtttgcattggtttcaacaatattttgacatttaaaaagttaaatttatcacttttcaccatttttcaatactatatttttattttta 30475515  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattc 292  Q
    ||  |||||||||| ||  | || |||||||||||||||    
T  30475516 tctccttatccaataccctaagggcaatggttagcattc 30475554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 33951691 - 33951804
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||| || ||| |||| |||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||   |||||||||||||| |    
T  33951691 caaaattaacatgtttgtattggtttcaacaacattttaatttttaaaaagttaaatttatcacttttcacaattttccaatactatatttctattttta 33951790  T
Q  254 tccacttatccaat 267  Q
    ||| ||||| ||||    
T  33951791 tccccttattcaat 33951804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 154 - 250
Target Start/End: Original strand, 52341592 - 52341688
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattt 250  Q
    ||||| ||| || |||||||||| |||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| | ||||||||||||    
T  52341592 caaaattagtatgtttgcattggattcaacaacattttgacttttaaaaagttaaattcatcatttttcatcattttccaacataatatttctattt 52341688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 198 - 294
Target Start/End: Complemental strand, 19876257 - 19876161
Alignment:
Q  198 taaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||||||||||||||||||||||||||| |||||||||   |||||||||||||| |||| |||||||||||| ||| ||  ||| ||||||||||||    
T  19876257 taaaaagttaaatttatcacttttcactattttccaatactatatttctatttttatccccttatccaatgcttcaagggtaattgttagcattctc 19876161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 206 - 294
Target Start/End: Original strand, 51290473 - 51290561
Alignment:
Q  206 taaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||||||||||||||||| |||||||||| | |||||||||| ||| |||| ||||||||||| | || ||||||||||||||||||||    
T  51290473 taaatttatcacttttcatcattttccaatgctatatttctaattttatccccttatccaatgtcccaaggacaatggttagcattctc 51290561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 153 - 287
Target Start/End: Complemental strand, 53567072 - 53566935
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttat---cacttttcaccattttccaacgttatatttctatt 249  Q
    ||||||||||||| |||||||  |||||||||||||||| ||||||||||||||||||||||    |||||| || ||||| ||| | ||||||||||||    
T  53567072 tcaaaagtagcatgtttgcatgagtttcaacaacattttaacttttaaaaagttaaatttattagtactttttactatttttcaatgctatatttctatt 53566973  T
Q  250 ttcatccacttatccaatgcctcacggacaatggttag 287  Q
    || |||   ||| |||||||| ||  ||||||||||||    
T  53566972 tttatctctttaaccaatgccccaaagacaatggttag 53566935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 35675309 - 35675192
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    |||||||||| || |||||||||  |||||||| ||||| ||||||||||||||||||| |||||||||||| |||| ||||    |||||||||||||     
T  35675309 tcaaaagtagtatgtttgcattgaattcaacaatattttaacttttaaaaagttaaattcatcacttttcactatttcccaatacaatatttctattttt 35675210  T
Q  253 atccacttatccaatgcc 270  Q
    |||  |||| ||||||||    
T  35675209 atcgtcttaaccaatgcc 35675192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 9693590 - 9693528
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatc 215  Q
    |||||| |||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  9693590 tcaaaaatagcatgtttgcattggtttcaacaatatttcgacttttaaaaagttaaatttatc 9693528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 154 - 268
Target Start/End: Original strand, 40436072 - 40436186
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| ||||| ||||||||||||| |||||||  ||||||||||||||||||| | |||||| ||||||  || | ||| |||  ||||| |    
T  40436072 caaaagtagcatgtttgctttggtttcaacaatattttgatatttaaaaagttaaatttattatttttcatcattttttaatgctattttttcattttta 40436171  T
Q  254 tccacttatccaatg 268  Q
    ||| |||||||||||    
T  40436172 tccccttatccaatg 40436186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 35511264 - 35511184
Alignment:
Q  188 ttttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatg 268  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||||||    ||||||||||||||||| ||||| ||||||    
T  35511264 ttttaacttttaaaaagtcaaattcatcacttttcaccattttccaatacaatatttctattttcatctacttaaccaatg 35511184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 154 - 244
Target Start/End: Original strand, 45088061 - 45088148
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatattt 244  Q
    ||||||||| || ||||||||| |||||||   ||||||||||| ||||| ||||||||||||||||||| |||||||||| | |||||||    
T  45088061 caaaagtagtatgtttgcattgatttcaac---attttgactttcaaaaaattaaatttatcacttttcatcattttccaatgctatattt 45088148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 3769803 - 3769897
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttcta 247  Q
    |||||||||| |  |||||||||  || ||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||| |  |||||||||    
T  3769803 tcaaaagtagtaggtttgcattgaatttaacaatattttaacttttaaaaagtcaaatttatcacttttcaccatttttcaatgcaatatttcta 3769897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 185 - 293
Target Start/End: Original strand, 31487743 - 31487851
Alignment:
Q  185 acattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcacggacaatggt 284  Q
    |||||||||  |||||||||| ||||||||||||||| || ||||| ||| | ||||||| |||||| |||| ||||| ||||||  || || |||||||    
T  31487743 acattttgatctttaaaaagtcaaatttatcacttttaactatttttcaatgctatatttttatttttatccccttattcaatgctccaagggcaatggt 31487842  T
Q  285 tagcattct 293  Q
    || ||||||    
T  31487843 taacattct 31487851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 15986258 - 15986333
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 230  Q
    |||||||| || |||||||||  |||||||| ||| ||||||||||||| ||||||| | ||||||||||||||||    
T  15986258 aaaagtagaatgtttgcattgaattcaacaatattctgacttttaaaaatttaaattcaccacttttcaccatttt 15986333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 264
Target Start/End: Original strand, 20456559 - 20456670
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||| |||||||||  |||||||| ||||| || |||||||| ||||||| || |||||||| |||||| |||    | |||||||||||     
T  20456559 tcaaaagtagcatgtttgcattgaattcaacaatattttaacatttaaaaatttaaattcataacttttcatcatttttcaataaaacatttctattttt 20456658  T
Q  253 atccacttatcc 264  Q
    |||| |||||||    
T  20456659 atcctcttatcc 20456670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 46823488 - 46823543
Alignment:
Q  179 tcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    |||||||  |||||||||||||||||||||||| || |||||||||||||||||||    
T  46823488 tcaacaattttttgacttttaaaaagttaaattcataacttttcaccattttccaa 46823543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 30617954 - 30618056
Alignment:
Q  168 ttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaat 267  Q
    ||||||||| |||||||| ||||  ||||||||||||||||||| ||  ||||||| ||||| |||| |  |||||||||| || |||| |||| |||||    
T  30617954 ttgcattggattcaacaatatttgaacttttaaaaagttaaattcattgcttttcatcatttcccaatgcaatatttctatgtttatcctcttaaccaat 30618053  T
Q  268 gcc 270  Q
    |||    
T  30618054 gcc 30618056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 35927379 - 35927315
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttc 231  Q
    |||||||| | |||||||| ||||| ||||||||||||||||||| |||  ||||||||||||||    
T  35927379 tttgcattagattcaacaatattttaacttttaaaaagttaaattcatcgtttttcaccattttc 35927315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 36486780 - 36486724
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    ||||| || ||||||||||||||||| |||||||  |||||||||||||||||||||    
T  36486780 ttcaataatattttgacttttaaaaaattaaattcttcacttttcaccattttccaa 36486724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 51018496 - 51018400
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 251  Q
    |||||||| |||||| |||||  ||||||||  |||| | |||||||||||||||||  ||||||||||||||||| ||| |  || ||||||||||    
T  51018496 aaaagtagtatatttacattgaattcaacaatgttttaatttttaaaaagttaaattcttcacttttcaccatttttcaatgcaatgtttctatttt 51018400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 208 - 267
Target Start/End: Complemental strand, 46696026 - 46695967
Alignment:
Q  208 aatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaat 267  Q
    ||||||||||||||||||||||| |||   ||||||| |||||| |||||||||||||||    
T  46696026 aatttatcacttttcaccatttttcaatcctatatttttatttttatccacttatccaat 46695967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 48513624 - 48513686
Alignment:
Q  168 ttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 230  Q
    ||||||||  ||||||||  ||||||||||||||||||||||| | |||||||||| ||||||    
T  48513624 ttgcattgaattcaacaatgttttgacttttaaaaagttaaatctttcacttttcatcatttt 48513686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 11996182 - 11996141
Alignment:
Q  193 acttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    ||||||| |||||||||| |||||||||||||||||||||||    
T  11996182 acttttagaaagttaaatctatcacttttcaccattttccaa 11996141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 1457640 - 1457556
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 251  Q
    |||||||||  |||||||| ||||| ||||||||||| |||||||||||| |||| |  | ||| ||| || |||||||||||||    
T  1457640 tttgcattgaattcaacaatattttaacttttaaaaaattaaatttatcaatttttattacttttcaatgtaatatttctatttt 1457556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 279
Target Start/End: Complemental strand, 13498218 - 13498110
Alignment:
Q  171 cattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcc 270  Q
    |||||| ||||||||  |||||||||||||||||||||||| |||  | || || |||||||||    ||||||||||||| |||  |||| |||||||     
T  13498218 cattggattcaacaaagttttgacttttaaaaagttaaattcatcgttctttactattttccaatacaatatttctatttttatcatcttaaccaatgca 13498119  T
Q  271 tcacggaca 279  Q
    ||| |||||    
T  13498118 tcaaggaca 13498110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 270
Target Start/End: Original strand, 29462809 - 29462908
Alignment:
Q  171 cattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcc 270  Q
    |||||| |||||||||||||||||||| ||||| | |||||  ||| |||||| |||||| |||  | |||||| |||||| |||| ||||  |||||||    
T  29462809 cattggattcaacaacattttgactttgaaaaaataaaattcctcatttttcatcatttttcaatataatatttttatttttatcctcttaaacaatgcc 29462908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 31494779 - 31494704
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattt 229  Q
    ||||||||  |||||| |||||  ||||||||  ||||| | ||||||||||||||||  ||||||||||||||||    
T  31494779 caaaagtaatatatttacattgaattcaacaatgttttgtcatttaaaaagttaaattcttcacttttcaccattt 31494704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 35808514 - 35808479
Alignment:
Q  71 caaaagtagcatatttgcattggtttcaacaacatt 106  Q
    |||||||||||| |||||||||||||||||||||||    
T  35808514 caaaagtagcatgtttgcattggtttcaacaacatt 35808479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 47188783 - 47188748
Alignment:
Q  71 caaaagtagcatatttgcattggtttcaacaacatt 106  Q
    |||||||||||| |||||||||||||||||||||||    
T  47188783 caaaagtagcatgtttgcattggtttcaacaacatt 47188748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 50514731 - 50514696
Alignment:
Q  71 caaaagtagcatatttgcattggtttcaacaacatt 106  Q
    |||||||||||| |||||||||||||||||||||||    
T  50514731 caaaagtagcatgtttgcattggtttcaacaacatt 50514696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 199 - 293
Target Start/End: Complemental strand, 9693454 - 9693361
Alignment:
Q  199 aaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcacggacaatggttagcattct 293  Q
    ||||| |||||||||||| |||||||| ||||| ||  |||||| | |||||| |||| ||||||||||||  ||  ||||||||||||| ||||    
T  9693454 aaaaatttaaatttatcatttttcacctttttc-aatattatatctttatttttatccccttatccaatgcgccaaagacaatggttagcgttct 9693361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 20435874 - 20435828
Alignment:
Q  188 ttttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    |||||| |||||||||||||||||  ||||||||||| |||||||||    
T  20435874 ttttgatttttaaaaagttaaattcttcacttttcacaattttccaa 20435828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 23765570 - 23765604
Alignment:
Q  72 aaaagtagcatatttgcattggtttcaacaacatt 106  Q
    ||||||||||| |||||||||||||||||||||||    
T  23765570 aaaagtagcatgtttgcattggtttcaacaacatt 23765604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 49483122 - 49483168
Alignment:
Q  188 ttttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    |||| ||||| ||||||| |||| |||||||||||||||||||||||    
T  49483122 ttttaactttgaaaaagtcaaatctatcacttttcaccattttccaa 49483168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 229
Target Start/End: Original strand, 1801635 - 1801668
Alignment:
Q  196 tttaaaaagttaaatttatcacttttcaccattt 229  Q
    ||||||||||||||||||| ||||||||||||||    
T  1801635 tttaaaaagttaaatttataacttttcaccattt 1801668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 32584613 - 32584560
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttc 231  Q
    |||||||| ||||| |||||||||||||| |||| || |||||| |||||||||    
T  32584613 ttcaacaatattttaacttttaaaaagttgaattcattactttttaccattttc 32584560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 39158445 - 39158364
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    |||||||||| || ||| |||||  || ||||| ||||| | ||||||||||||||||  ||||||||||||| ||| ||||    
T  39158445 tcaaaagtagtatgtttacattgaattgaacaatattttaatttttaaaaagttaaatagatcacttttcaccctttcccaa 39158364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 40593620 - 40593672
Alignment:
Q  181 aacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    ||||||||| |||||||||||| |||||||| |||||||||||| |||| ||||    
T  40593620 aacaacattatgacttttaaaa-gttaaattcatcacttttcactatttcccaa 40593672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 52895749 - 52895790
Alignment:
Q  188 ttttgacttttaaaaagttaaatttatcacttttcaccattt 229  Q
    |||||||||||||||||||||| || ||||||||||| ||||    
T  52895749 ttttgacttttaaaaagttaaaattttcacttttcacaattt 52895790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 5e-49; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 8715618 - 8715480
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |     
T  8715618 aaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttctattttta- 8715520  T
Q  255 ccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    || |||||||||||||  | ||||||||||||||||||||    
T  8715519 ccccttatccaatgccctaaggacaatggttagcattctc 8715480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 9067505 - 9067367
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |     
T  9067505 aaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttctattttta- 9067407  T
Q  255 ccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    || |||||||||||||  | ||||||||||||||||||||    
T  9067406 ccccttatccaatgccctaaggacaatggttagcattctc 9067367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 154 - 292
Target Start/End: Original strand, 46317477 - 46317615
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||| |    
T  46317477 caaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcatttttcatcattttccaatgttatatttctattttta 46317576  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattc 292  Q
    || |||||||||||| |||| || |||||||||||||||    
T  46317577 tctacttatccaatgtctcaagggcaatggttagcattc 46317615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 44570504 - 44570364
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |    
T  44570504 caaaagtagcatgtttgcattgatttcaacaacattttgacttttaaaaagttaaagttatcacttttcaccattttccaatgttatatttctattttga 44570405  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||  ||||| |||||| || || |||||||||||||||||    
T  44570404 tccctttatcgaatgccccaagggcaatggttagcattctc 44570364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 36730271 - 36730131
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||   ||||||| |||||| |    
T  36730271 caaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttttcaatactatatttatattttta 36730172  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| |||||||||||||  | || |||||||||||||||||    
T  36730171 tccccttatccaatgccataagggcaatggttagcattctc 36730131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 153 - 294
Target Start/End: Original strand, 37509101 - 37509242
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| | |  ||||| |||||     
T  37509101 tcaaaagtaacatatttgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcactattttccaatgctgcatttcaattttt 37509200  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||| ||||||||||||| ||  | |||||||||||||||||    
T  37509201 atccccttatccaatgccccaaaggcaatggttagcattctc 37509242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 4759968 - 4759828
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| |    
T  4759968 caaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttttcaatgctatatttctattttta 4759869  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||  |||||||||||  ||    |||||||||||||||||    
T  4759868 tccctttatccaatgctccaaatgcaatggttagcattctc 4759828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 32415560 - 32415700
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||| | |||||||||||||| |    
T  32415560 caaaagtaacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatgacttttcacaatttttcaatgctatatttctattttta 32415659  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||  ||||||||||||||| || ||||| ||| |||||||    
T  32415660 tccctttatccaatgcctcaagggcaatgattaacattctc 32415700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 154 - 293
Target Start/End: Original strand, 35306323 - 35306462
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| ||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |    
T  35306323 caaaagtagcatgtttgcattgatttcaataacattttaacttttaaaaagttaaatttatcacttttcatcattttccaatgttatatttctattttta 35306422  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattct 293  Q
    ||| ||||||||||  | || || |||||||||| |||||    
T  35306423 tccccttatccaattgcccaagggcaatggttagtattct 35306462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 12905399 - 12905292
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| |||||||||||||||| ||    
T  12905399 aaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaatgttaaatttatcatttttcaccatttt-caatgttatatttctatttttat 12905301  T
Q  255 ccacttatc 263  Q
    || ||||||    
T  12905300 ccccttatc 12905292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 29915693 - 29915553
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||| | |||| ||||||||||||   ||||||| |||||| |    
T  29915693 caaaagtagaatgtttgcattggtttcaaccacattttgacttttaaaaagttaaatttataattttttaccattttccaatactatatttttattttta 29915594  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| ||||||||| ||| || || |||||||||||||||||    
T  29915593 tccccttatccaacgccccaagggcaatggttagcattctc 29915553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 29964846 - 29964706
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||| | |||| ||||||||||||   ||||||| |||||| |    
T  29964846 caaaagtagaatgtttgcattggtttcaaccacattttgacttttaaaaagttaaatttataattttttaccattttccaatactatatttttattttta 29964747  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| ||||||||| ||| || || |||||||||||||||||    
T  29964746 tccccttatccaacgccccaagggcaatggttagcattctc 29964706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 44695789 - 44695649
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||| ||| ||||||||| ||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||  |||||||| |||||| |    
T  44695789 caaaagtaacatgtttgcattgatttcaacaacattttaatttttaaaaagttaaatttatcatttttcaccattttccaagattatatttatattttta 44695690  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| ||||||||||| | ||  ||||||| |||||||||||    
T  44695689 tccccttatccaatgtcccaatgacaatgattagcattctc 44695649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 154 - 270
Target Start/End: Complemental strand, 51817430 - 51817314
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| |||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||| |    
T  51817430 caaaagtagcatgtttgtattagtttcaacaatattttgacttttaaaaagttaaatttatcacttttcaccattttccaatgctatatttttattttta 51817331  T
Q  254 tccacttatccaatgcc 270  Q
    ||| ||||| |||||||    
T  51817330 tcctcttattcaatgcc 51817314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 154 - 268
Target Start/End: Complemental strand, 8847570 - 8847456
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| ||| ||||| ||||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| |    
T  8847570 caaaagtagcatgtttacattgttttcaacaatattttaacttttaaaaagttaaattaatcactttttaccattttccaatgttatatttctattttta 8847471  T
Q  254 tccacttatccaatg 268  Q
    ||| |||||||||||    
T  8847470 tccccttatccaatg 8847456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 154 - 292
Target Start/End: Original strand, 10854850 - 10854992
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt-- 251  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||| | |||||||||| |||      
T  10854850 caaaagtagcatgtttgcattggtttcaacaacattttaacttttaaaaagttaaatttattagttttcaccattttccaatgctatatttctactttta 10854949  T
Q  252 --catccacttatccaatgcctcacggacaatggttagcattc 292  Q
      ||||| ||||||||||||| || || ||||| ||| |||||    
T  10854950 tccatccccttatccaatgccccaagggcaatgattaacattc 10854992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 25102439 - 25102300
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||| |||||||||||| |||||||||||| | |||||||||||||| |    
T  25102439 caaaagtagcatatttgcattggtttcaacaatattttaactttaaaaaaattaa-tttatcactttttaccattttccaatgctatatttctattttta 25102341  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||   |||||||||| | || || |||||||||||||||||    
T  25102340 tctcattatccaatgtcccaagggcaatggttagcattctc 25102300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 154 - 251
Target Start/End: Original strand, 52570771 - 52570870
Alignment:
Q  154 caaaagtagcatat--ttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 251  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||    
T  52570771 caaaagtagcatatgtttgcattggtttcaacaatattttgacttttaaaaagttatatttatcacttttcaccattttccaatactatatttctatttt 52570870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 20227499 - 20227405
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttcta 247  Q
    ||||||||| ||| |||| ||||||||||| |||||||| |||||||| |||||||||||||||||||||| |||||| ||| | ||||||||||    
T  20227499 tcaaaagtaacatgtttgtattggtttcaataacattttaacttttaagaagttaaatttatcacttttcatcatttttcaatgctatatttcta 20227405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 154 - 251
Target Start/End: Original strand, 12051029 - 12051126
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 251  Q
    |||||||||||| ||||||||| ||||||||||||||| | |||||||||||||||||||||| ||||||  ||||| |||   ||||||||||||||    
T  12051029 caaaagtagcatgtttgcattgttttcaacaacattttaatttttaaaaagttaaatttatcatttttcattattttacaatactatatttctatttt 12051126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 31647295 - 31647364
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttca 223  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  31647295 caaaagtagcatgtttgcattgatttcaataacattttgacttttaaaaagttaaatttatcatttttca 31647364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 154 - 270
Target Start/End: Complemental strand, 45899662 - 45899545
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcac-ttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||| || ||| |||||  |||||||| ||||||||||||||||| ||||||| ||||| |||||| ||||||||||  | |||||||||||||     
T  45899662 caaaagtagtatgtttacattgaattcaacaatattttgacttttaaaaatttaaattcatcactttttcatcattttccaatataatatttctattttt 45899563  T
Q  253 atccacttatccaatgcc 270  Q
    || | |||||||||||||    
T  45899562 attctcttatccaatgcc 45899545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 194 - 294
Target Start/End: Original strand, 1803919 - 1804019
Alignment:
Q  194 cttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcacggacaatggttagcattct 293  Q
    |||||| |||||||||||||||| |||| ||| |||| |||   |||||||||||||| |||| ||||||||||||| || |||||||| ||||||||||    
T  1803919 cttttacaaagttaaatttatcattttttaccctttttcaataatatatttctatttttatccccttatccaatgccccaaggacaatgattagcattct 1804018  T
Q  294 c 294  Q
    |    
T  1804019 c 1804019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 18888 - 18789
Alignment:
Q  171 cattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcc 270  Q
    |||||| |||||||| ||||| | ||||||||||||||||| ||||||||||||| ||| |||| |  ||||||||||||| |||| |||| ||||||||    
T  18888 cattggattcaacaatattttaatttttaaaaagttaaattcatcacttttcaccgtttcccaatgcaatatttctatttttatcctcttaaccaatgcc 18789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 204 - 294
Target Start/End: Complemental strand, 48136790 - 48136701
Alignment:
Q  204 gttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||||||||||||||||| ||| ||||||||| | |||||||||||||| || | |||||||||| || || ||||||||||||||||||||    
T  48136790 gttaaatttatcacttt-cacaattttccaatgctatatttctatttttattcccttatccaataccccaaggacaatggttagcattctc 48136701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 11316970 - 11317037
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    |||||||| | ||||| || ||||||||||||||||||||||||| || |||||||||||||||||||    
T  11316970 tttgcattagattcaataatattttgacttttaaaaagttaaattcataacttttcaccattttccaa 11317037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 230
Target Start/End: Complemental strand, 34060871 - 34060808
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 230  Q
    |||||||||  |||||||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  34060871 tttgcattgaattcaacaatattttaacttttaaaaagttaaattcatcacttttcaccatttt 34060808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 41345979 - 41346042
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 230  Q
    ||||||||||||||||||| ||||| ||||||||||| |||||||||| ||||||||| |||||    
T  41345979 tttgcattggtttcaacaatattttaacttttaaaaaattaaatttattacttttcactatttt 41346042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 19029 - 18949
Alignment:
Q  171 cattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 251  Q
    |||||| |||||||| ||||| | ||||||||||||||||| ||||||||||||| ||| |||| |  |||||||||||||    
T  19029 cattggattcaacaatattttaatttttaaaaagttaaattcatcacttttcaccgtttcccaatgcaatatttctatttt 18949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 251
Target Start/End: Original strand, 21324521 - 21324603
Alignment:
Q  168 ttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 251  Q
    |||||| || |||||||| ||||| |||||||||||||||||| |||||||||||| || ||||||| |  |||||||||||||    
T  21324521 ttgcatcggattcaacaatattttaacttttaaaaagttaaatctatcacttttcatca-tttccaatgcaatatttctatttt 21324603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 49976232 - 49976185
Alignment:
Q  181 aacaacattttgacttttaaaaagttaaatttatcacttttcaccatt 228  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  49976232 aacaatattttgacttttaaaaagttaaattcatcacttttcaccatt 49976185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 294
Target Start/End: Original strand, 41346349 - 41346405
Alignment:
Q  238 tatatttctattttcatccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||||||||||||| |||| ||||||||||||| || |||||||||||| |||||||    
T  41346349 tatatttctatttttatccccttatccaatgccccaaggacaatggttaacattctc 41346405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 33641282 - 33641337
Alignment:
Q  193 acttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctat 248  Q
    |||||||||||||| ||||||||| ||||||||| |||||||| | ||||||||||    
T  33641282 acttttaaaaagttgaatttatcatttttcaccaatttccaacataatatttctat 33641337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 34750362 - 34750295
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    |||| ||||| |||||||| ||||| | || |||||||||||||| |||||||||||||| |||||||    
T  34750362 tttgtattggattcaacaatattttaatttataaaaagttaaattcatcacttttcaccagtttccaa 34750295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 41998901 - 41998954
Alignment:
Q  182 acaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaac 235  Q
    |||||||||| ||||||| |||||| |||||| |||||||||||||||| ||||    
T  41998901 acaacatttttacttttataaagttgaatttaacacttttcaccatttttcaac 41998954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 10854850 - 10854885
Alignment:
Q  71 caaaagtagcatatttgcattggtttcaacaacatt 106  Q
    |||||||||||| |||||||||||||||||||||||    
T  10854850 caaaagtagcatgtttgcattggtttcaacaacatt 10854885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 102
Target Start/End: Complemental strand, 25102439 - 25102408
Alignment:
Q  71 caaaagtagcatatttgcattggtttcaacaa 102  Q
    ||||||||||||||||||||||||||||||||    
T  25102439 caaaagtagcatatttgcattggtttcaacaa 25102408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 36730271 - 36730236
Alignment:
Q  71 caaaagtagcatatttgcattggtttcaacaacatt 106  Q
    |||||||||||| |||||||||||||||||||||||    
T  36730271 caaaagtagcatgtttgcattggtttcaacaacatt 36730236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 39974906 - 39974847
Alignment:
Q  172 attggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttc 231  Q
    ||||| |||||||  ||||| ||||||||||||||||||| ||||||| ||| |||||||    
T  39974906 attggattcaacactattttaacttttaaaaagttaaattcatcacttctcatcattttc 39974847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 8715618 - 8715584
Alignment:
Q  72 aaaagtagcatatttgcattggtttcaacaacatt 106  Q
    ||||||||||| |||||||||||||||||||||||    
T  8715618 aaaagtagcatgtttgcattggtttcaacaacatt 8715584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 9067505 - 9067471
Alignment:
Q  72 aaaagtagcatatttgcattggtttcaacaacatt 106  Q
    ||||||||||| |||||||||||||||||||||||    
T  9067505 aaaagtagcatgtttgcattggtttcaacaacatt 9067471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 12905399 - 12905365
Alignment:
Q  72 aaaagtagcatatttgcattggtttcaacaacatt 106  Q
    ||||||||||| |||||||||||||||||||||||    
T  12905399 aaaagtagcatgtttgcattggtttcaacaacatt 12905365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 50420688 - 50420742
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcactttt 221  Q
    |||||||||  ||||||||  |||| |||||||||||||||||| ||||||||||    
T  50420688 tttgcattgaattcaacaattttttaacttttaaaaagttaaatctatcactttt 50420742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 9189255 - 9189308
Alignment:
Q  196 tttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatt 249  Q
    ||||||||||| |||| ||||||||| |||| |||||||| | |||||||||||    
T  9189255 tttaaaaagttgaattcatcactttttaccactttccaacataatatttctatt 9189308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 11675320 - 11675361
Alignment:
Q  170 gcattggtttcaacaacattttgacttttaaaaagttaaatt 211  Q
    ||||||| |||||||| |||||||| ||||||||||||||||    
T  11675320 gcattggattcaacaatattttgacatttaaaaagttaaatt 11675361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 26850579 - 26850510
Alignment:
Q  187 attttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatcc 256  Q
    ||||| ||||||||||| ||||||| ||||||||| ||||||||| ||  | |||||| |||||| ||||    
T  26850579 attttaacttttaaaaaattaaattcatcactttttaccattttctaatataatatttatatttttatcc 26850510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 5e-49; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 167 - 294
Target Start/End: Complemental strand, 765255 - 765128
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 266  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| |||||||||    
T  765255 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcacaattttccaatgttatatttctatttttatccccttatccaa 765156  T
Q  267 tgcctcacggacaatggttagcattctc 294  Q
    |||| || || |||||||||||||||||    
T  765155 tgccccaagggcaatggttagcattctc 765128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 2966532 - 2966645
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  2966532 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccattttccaatgttatatttctatttttat 2966631  T
Q  255 ccacttatccaatg 268  Q
    || |||||||||||    
T  2966632 ccccttatccaatg 2966645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 39401652 - 39401513
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||| |    
T  39401652 caaaagtagcatgtttgtattggtttcaacaaaattttgacttttaaaaagttaaatt-atcacttttcaccatttttcaatgttatatttctattttta 39401554  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| ||||||||||||| || || |||||||||||||||||    
T  39401553 tccccttatccaatgccccaagggcaatggttagcattctc 39401513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 17095184 - 17095045
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |  |||||||||||||||| |    
T  17095184 caaaaatagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt-tagagttatatttctattttta 17095086  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||  ||||||||||||  | | ||||||||||||||||||    
T  17095085 tccctttatccaatgccctaagaacaatggttagcattctc 17095045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 153 - 294
Target Start/End: Original strand, 27495113 - 27495254
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    |||||||||| || ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| || ||||||||| ||||||     
T  27495113 tcaaaagtagtatgtttgcattggtttcaacaacattttgatttttaaaatgttaaatttatcacttttcaccattttctaatgttatatttttattttt 27495212  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||| ||||| ||||||| || |  |||||||||||||||||    
T  27495213 atccccttattcaatgccccaagtgcaatggttagcattctc 27495254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 153 - 291
Target Start/End: Complemental strand, 39085911 - 39085773
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||     
T  39085911 tcaaaagcagcatgtttgcattgatttcaacaacattttgacttttaaaaagttaaatttatcactttttatcattttccaatgttatatttctattttt 39085812  T
Q  253 atccacttatccaatgcctcacggacaatggttagcatt 291  Q
    ||||  |||||||||| | || |  ||||||||||||||    
T  39085811 atccctttatccaatgtcccaagagcaatggttagcatt 39085773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 154 - 270
Target Start/End: Original strand, 6999193 - 6999309
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||||||||||| |    
T  6999193 caaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcatttttcaccattttccaatactatatttctattttta 6999292  T
Q  254 tccacttatccaatgcc 270  Q
    ||  |||||||| ||||    
T  6999293 tctccttatccattgcc 6999309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 17056175 - 17056036
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |  ||||||||||| |||| |    
T  17056175 caaaaatagcatatttgcattggtttcaacaacattttgtcttttaaaaagttaaatttatcacttttcaccatttt-tagtgttatatttcttttttta 17056077  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||  ||||||||||||  | || |||||||||||||||||    
T  17056076 tccctttatccaatgccctaagggcaatggttagcattctc 17056036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 17068622 - 17068483
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |  ||||||||||| |||| |    
T  17068622 caaaaatagcatatttgcattggtttcaacaacattttgtcttttaaaaagttaaatttatcacttttcaccatttt-tagtgttatatttcttttttta 17068524  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||  ||||||||||||  | || |||||||||||||||||    
T  17068523 tccctttatccaatgccctaagggcaatggttagcattctc 17068483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 154 - 293
Target Start/End: Original strand, 862580 - 862719
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||| |    
T  862580 caaaagtagcatgtttgcattggtttcaacaagattttgactcttaaaaagttaaatttatcacttttcaccattttccaatactatatttctattttta 862679  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattct 293  Q
    |||  |||| |||||||  | || |||| |||||||||||    
T  862680 tcccattattcaatgccctaagggcaattgttagcattct 862719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 160 - 294
Target Start/End: Original strand, 1321165 - 1321299
Alignment:
Q  160 tagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccact 259  Q
    |||||| ||| ||||| ||||||||||||||||| ||||||| |||||||||||| | |||| |||||||||||| |||||||||||||||| |||| ||    
T  1321165 tagcatgtttacattgatttcaacaacattttgatttttaaagagttaaatttattattttttaccattttccaatgttatatttctatttttatcctct 1321264  T
Q  260 tatccaatgcctcacggacaatggttagcattctc 294  Q
    ||||||||||  || ||||||||||||||||||||    
T  1321265 tatccaatgctccaaggacaatggttagcattctc 1321299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 154 - 291
Target Start/End: Original strand, 16361557 - 16361694
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||| ||| |||||||||||||| |||||||||||||||||| |||||||||||||||| |||| |||||||||||| |||||||||||||||| |    
T  16361557 caaaagtaacatgtttgcattggtttcgacaacattttgacttttataaagttaaatttatcaatttttaccattttccaatgttatatttctattttta 16361656  T
Q  254 tccacttatccaatgcctcacggacaatggttagcatt 291  Q
    | | ||||||||||||  || || |||| |||||||||    
T  16361657 ttcccttatccaatgctccaagggcaattgttagcatt 16361694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 157 - 294
Target Start/End: Original strand, 33864349 - 33864486
Alignment:
Q  157 aagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatcc 256  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||| |  |||||| |||||| ||||    
T  33864349 aagtaacatatttgcattggtttcaacaatattttgacttttaaaatgttaaatttattacttttcaccattttccaatgcgatatttttatttttatcc 33864448  T
Q  257 acttatccaatgcctcacggacaatggttagcattctc 294  Q
     ||||| ||||| |||| || ||||||||| |||||||    
T  33864449 tcttattcaatgtctcaagggcaatggttaacattctc 33864486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 17074605 - 17074466
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |  |||||||||||||||| |    
T  17074605 caaaaatagcatatttgcattagtttcaacaacattttgtcttttaaaaagttaaatttatcacttttcaccatttt-tagtgttatatttctattttta 17074507  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||  ||||| ||||||  | || |||||||||||||||||    
T  17074506 tccctttatctaatgccctaagggcaatggttagcattctc 17074466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 35445410 - 35445292
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgactttt-aaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 251  Q
    ||||||||||||| |||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  35445410 tcaaaagtagcatgtttgtattggtttcaacaatattttgacttttgaaaaagttaaatttatcacttttcaccatttttcaatgttatatttatatttt 35445311  T
Q  252 catccacttatccaatgcc 270  Q
     |||| ||||| |||||||    
T  35445310 tatccccttattcaatgcc 35445292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 153 - 294
Target Start/End: Original strand, 41436468 - 41436609
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||   ||||||| ||||||     
T  41436468 tcaaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaagttaagtttatcacttttcatcatttttcaatactatatttttattttt 41436567  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||| ||||| ||||  | || | |||||||||| |||||||    
T  41436568 atccccttattcaatatcccaagaacaatggttaccattctc 41436609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 153 - 282
Target Start/End: Complemental strand, 9201613 - 9201485
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||| ||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||  ||||||| |||||||     
T  9201613 tcaaaagtaacatgtttgtattggtt-caacaacattttgacttttaaaaagttaaatttatcacttttcaccattttttaatattatattcctattttt 9201515  T
Q  253 atccacttatccaatgcctcacggacaatg 282  Q
    |||   |||||||||| |||| ||||||||    
T  9201514 atctcattatccaatgtctcaaggacaatg 9201485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 44299782 - 44299683
Alignment:
Q  171 cattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcc 270  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| | | | |||||||||||||| |||| |||| ||||||||    
T  44299782 cattggtttcaacaatattttgacttttaaaatgttaaatttatcacttttcaccatttttcgaggctatatttctatttttatcctcttacccaatgcc 44299683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 154 - 268
Target Start/End: Complemental strand, 17118490 - 17118377
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||| || |||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||| |||||||||   ||||||||||||||| |    
T  17118490 caaaaataacatatttgcattggtttcaacaacattt-gagttttaaaaagttaaatttatcatttttcaacattttccagtattatatttctattttta 17118392  T
Q  254 tccacttatccaatg 268  Q
    |||  ||||||||||    
T  17118391 tccctttatccaatg 17118377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 23685770 - 23685690
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    |||||||| ||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23685770 caaaagtaacatgtttgcattgatttcaataacattttgacttttaaaaagttaaatttatcacttttccccattttccaa 23685690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 160 - 287
Target Start/End: Original strand, 17603808 - 17603935
Alignment:
Q  160 tagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccact 259  Q
    |||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||| |||| | |||||| ||| | |||||||||||||| |||   |    
T  17603808 tagcatgtttgcattgatttcaataacattttgacttttaaaaagttaaatttatcattttttatcatttttcaatgctatatttctatttttatcgcgt 17603907  T
Q  260 tatccaatgcctcacggacaatggttag 287  Q
    ||||||||||| || || ||||| ||||    
T  17603908 tatccaatgccccaagggcaatgattag 17603935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 13998016 - 13997882
Alignment:
Q  160 tagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccact 259  Q
    |||||| |||| |||| ||||||||| ||||| | |||||||||||||||||||||| ||||||| ||||| ||| | |||||||||||||| || | ||    
T  13998016 tagcatgtttgtattgatttcaacaatattttaatttttaaaaagttaaatttatcatttttcacaatttttcaatgctatatttctatttttattccct 13997917  T
Q  260 tatccaatgcctcacggacaatggttagcattctc 294  Q
    |||| ||| |||||    |||||||||||||||||    
T  13997916 tatctaattcctcaaaagcaatggttagcattctc 13997882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 33726370 - 33726487
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    |||||| |||||| |||| |||| ||||||||| ||||| ||||||| |||||||||||||| | ||||||||||||| |||   ||||||| ||||||     
T  33726370 tcaaaaatagcatgtttgtattgatttcaacaatattttaacttttagaaagttaaatttattatttttcaccatttttcaatactatatttttattttt 33726469  T
Q  253 atccacttatccaatgcc 270  Q
    |||| |||||||||||||    
T  33726470 atccccttatccaatgcc 33726487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 167 - 294
Target Start/End: Original strand, 44173123 - 44173250
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaa 266  Q
    |||| |||||||||||||||||||| | ||||||||| |||||||||||| |||||| |||||| ||| | |||||||||||||| |||   ||||| ||    
T  44173123 tttgtattggtttcaacaacattttaatttttaaaaaattaaatttatcatttttcatcatttttcaatgctatatttctatttttatcatattatcaaa 44173222  T
Q  267 tgcctcacggacaatggttagcattctc 294  Q
    || | ||   ||||||||||||||||||    
T  44173223 tgtcccaaaaacaatggttagcattctc 44173250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 15004917 - 15004987
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttca 223  Q
    ||||||||| ||| |||| |||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  15004917 tcaaaagtatcatgtttgtattggtttcaacaacattttaatttttaaaaagttaaatttatcacttttca 15004987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 464787 - 464889
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatca-cttttcaccattttccaacgttatatttctattttca 253  Q
    ||||||| ||| |||| |||| |||||| |||||||| ||||||||||||||||| ||||||  |||| |||||||| ||| |||||||||||||||| |    
T  464787 aaaagtaacatgtttgtattgatttcaataacattttaacttttaaaaagttaaaattatcatttttttaccatttttcaatgttatatttctattttta 464886  T
Q  254 tcc 256  Q
    |||    
T  464887 tcc 464889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 154 - 268
Target Start/End: Original strand, 2239573 - 2239687
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||||||| ||||||| ||||| |||||||| ||||| ||||||||||||||||||| |||| |||| |||||||| ||  |  |||||||||| || |    
T  2239573 caaaagtagtatatttgtattggattcaacaatattttaacttttaaaaagttaaattcatcattttttaccatttttcattgcaatatttctatcttta 2239672  T
Q  254 tccacttatccaatg 268  Q
    ||| |||| ||||||    
T  2239673 tcctcttaaccaatg 2239687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 11445437 - 11445379
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaattt 212  Q
    |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  11445437 caaaagtaacatgtttgcattggtttcaacaacattttgacatttaaaaagttaaattt 11445379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 176 - 286
Target Start/End: Complemental strand, 43140419 - 43140309
Alignment:
Q  176 gtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcacg 275  Q
    ||||||| || ||||| | |||||||||||||||||||||| |||||  |||||| ||| ||||||||| |||||| |||| ||||||||||  |||| |    
T  43140419 gtttcaataatatttttaattttaaaaagttaaatttatcatttttcgtcatttttcaatgttatatttttatttttatcctcttatccaatatctcaag 43140320  T
Q  276 gacaatggtta 286  Q
    |||||| ||||    
T  43140319 gacaatagtta 43140309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 11445364 - 11445313
Alignment:
Q  199 aaaaagttaaatttatcacttttcaccattttccaacgttatatttctattt 250  Q
    |||||||||||||||||| ||||||||||||| ||| |||||||||||||||    
T  11445364 aaaaagttaaatttatcatttttcaccatttttcaatgttatatttctattt 11445313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 34220740 - 34220650
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatg 268  Q
    |||||||| ||||| ||||||||||| ||||||| |||||||||||||| || |||| |  | ||||||||||| |||| |||| ||||||    
T  34220740 ttcaacaatattttaacttttaaaaacttaaattcatcacttttcaccacttcccaatgcaagatttctatttttatcctcttaaccaatg 34220650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 747585 - 747529
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    ||||||||  |||| |||||||||||||||||| ||||||||||||| |||||||||    
T  747585 ttcaacaattttttaacttttaaaaagttaaatctatcacttttcactattttccaa 747529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 257
Target Start/End: Complemental strand, 10900369 - 10900265
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    |||||| ||| |||||| |||||  ||||| || ||||| ||||||||||| | ||||| ||||||||| | |||||| ||| || |||||||||||||     
T  10900369 tcaaaaatagtatatttacattgaattcaataatattttaacttttaaaaaataaaattcatcactttttatcatttttcaatgtgatatttctattttt 10900270  T
Q  253 atcca 257  Q
    |||||    
T  10900269 atcca 10900265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 266
Target Start/End: Complemental strand, 34334278 - 34334167
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    ||||||||||| |||| ||||| |||||||| ||||| | || ||||||||| ||||| ||| |||| ||||||||| ||    ||||||||||||| ||    
T  34334278 aaaagtagcatgtttgtattggattcaacaatattttaatttgtaaaaagtttaatttgtcattttttaccattttcaaatacaatatttctatttttat 34334179  T
Q  255 ccacttatccaa 266  Q
    |  |||||||||    
T  34334178 catcttatccaa 34334167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 2966532 - 2966566
Alignment:
Q  72 aaaagtagcatatttgcattggtttcaacaacatt 106  Q
    |||||||||||||||||||||||||||||||||||    
T  2966532 aaaagtagcatatttgcattggtttcaacaacatt 2966566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 256
Target Start/End: Complemental strand, 3454819 - 3454714
Alignment:
Q  150 gtttcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatt 249  Q
    ||||||||||||| |  |||| ||||  |||||||| ||||| ||||||||||||||||| ||||||||||| ||||| ||  ||  | |||||||||||    
T  3454819 gtttcaaaagtagtaattttgtattgaattcaacaatatttt-acttttaaaaagttaaagttatcactttttaccatcttttaatataatatttctatt 3454721  T
Q  250 ttcatcc 256  Q
    || ||||    
T  3454720 ttgatcc 3454714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 11659253 - 11659329
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 230  Q
    |||||| || |||||| |||||  |||||||| ||||| | |||||||||||||||||  ||||||||||| |||||    
T  11659253 caaaagcagtatatttacattgaattcaacaatattttaatttttaaaaagttaaattcttcacttttcactatttt 11659329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 41436468 - 41436504
Alignment:
Q  70 tcaaaagtagcatatttgcattggtttcaacaacatt 106  Q
    ||||||||||||| |||||||||||||||||||||||    
T  41436468 tcaaaagtagcatgtttgcattggtttcaacaacatt 41436504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 6999193 - 6999228
Alignment:
Q  71 caaaagtagcatatttgcattggtttcaacaacatt 106  Q
    |||||||||||| |||||||||||||||||||||||    
T  6999193 caaaagtagcatgtttgcattggtttcaacaacatt 6999228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 17056175 - 17056140
Alignment:
Q  71 caaaagtagcatatttgcattggtttcaacaacatt 106  Q
    ||||| ||||||||||||||||||||||||||||||    
T  17056175 caaaaatagcatatttgcattggtttcaacaacatt 17056140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 17068622 - 17068587
Alignment:
Q  71 caaaagtagcatatttgcattggtttcaacaacatt 106  Q
    ||||| ||||||||||||||||||||||||||||||    
T  17068622 caaaaatagcatatttgcattggtttcaacaacatt 17068587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 17095184 - 17095149
Alignment:
Q  71 caaaagtagcatatttgcattggtttcaacaacatt 106  Q
    ||||| ||||||||||||||||||||||||||||||    
T  17095184 caaaaatagcatatttgcattggtttcaacaacatt 17095149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 29260222 - 29260167
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttcca 233  Q
    ||||||||  |||| |||||| |||||| |||| ||||||||||||||||||||||    
T  29260222 ttcaacaattttttaactttttaaaagtcaaatctatcacttttcaccattttcca 29260167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 34512671 - 34512714
Alignment:
Q  188 ttttgacttttaaaaagttaaatttatcacttttcaccattttc 231  Q
    |||| ||||||||||||| |||| ||||||||||||||||||||    
T  34512671 ttttaacttttaaaaagtcaaatctatcacttttcaccattttc 34512714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 2136451 - 2136529
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatcc 256  Q
    |||||||| ||||| |||||| |||||| |||||   ||||||||| |||||||||| |  ||||||||||||| ||||    
T  2136451 ttcaacaatattttcacttttcaaaagtcaaattctccacttttcatcattttccaatgcaatatttctatttttatcc 2136529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 2958548 - 2958506
Alignment:
Q  193 acttttaaaaagttaaatttatcacttttcaccattttccaac 235  Q
    ||||||||||||||||||| || ||||||||||| ||||||||    
T  2958548 acttttaaaaagttaaattcataacttttcaccactttccaac 2958506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 9965140 - 9965098
Alignment:
Q  187 attttgacttttaaaaagttaaatttatcacttttcaccattt 229  Q
    ||||||||||||||||||||||||| || | ||||||||||||    
T  9965140 attttgacttttaaaaagttaaattcataatttttcaccattt 9965098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 230
Target Start/End: Original strand, 37230253 - 37230287
Alignment:
Q  196 tttaaaaagttaaatttatcacttttcaccatttt 230  Q
    ||||||||||||| |||||||||||||||||||||    
T  37230253 tttaaaaagttaagtttatcacttttcaccatttt 37230287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 2805373 - 2805441
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgactttt--aaaaagttaaatttatcactttt 221  Q
    |||||||| || |||| ||| | |||||||| ||||||||||||  ||||||||||||| |||||||||    
T  2805373 aaaagtagtatgtttgtattagattcaacaatattttgacttttaaaaaaagttaaattcatcactttt 2805441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 268
Target Start/End: Original strand, 8327004 - 8327085
Alignment:
Q  187 attttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatg 268  Q
    ||||| |||||||||||||||||||| ||||||||||  ||||  ||| |  |||||| |||||| |||| |||| ||||||    
T  8327004 attttaacttttaaaaagttaaatttttcacttttcattatttctcaaagcaatatttttatttttatcctcttaaccaatg 8327085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 3e-47; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 153 - 293
Target Start/End: Original strand, 10855423 - 10855562
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||  |||||||||||||||     
T  10855423 tcaaaagtagcatatttgcat-ggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcatcatttttcaatattatatttctattttt 10855521  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattct 293  Q
    |||| |||||| |||||| || |||||||||||||||||||    
T  10855522 atccccttatcaaatgccccaaggacaatggttagcattct 10855562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 154 - 269
Target Start/End: Original strand, 12191484 - 12191599
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| |||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | |||||||||||||| |    
T  12191484 caaaagtagcatgtttgtattgatttcaacaacattttgacttttaaaaaattaaatttatcacttttcaccatttaccaatgctatatttctattttta 12191583  T
Q  254 tccacttatccaatgc 269  Q
    ||||||||||||||||    
T  12191584 tccacttatccaatgc 12191599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 153 - 294
Target Start/End: Original strand, 5578264 - 5578405
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||| || |||  ||||| ||| | ||||||||||||||     
T  5578264 tcaaaagtagcatgtttgcatttgtttcaacaatattttgacttttaaaaagttaaatttatcaattctcattatttttcaatgctatatttctattttt 5578363  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||| || ||||||||||||| || |||| |||| |||||||    
T  5578364 atcccctcatccaatgcctcaagggcaatagttatcattctc 5578405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 161 - 270
Target Start/End: Original strand, 6866913 - 6867022
Alignment:
Q  161 agcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccactt 260  Q
    ||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| || | ||||||| |||||| |||| |||    
T  6866913 agcatgtttgcattgatttcaacaacattttgacttttaaaaggttaaatttatcacttttcaccattttcaaatgctatatttttatttttatcccctt 6867012  T
Q  261 atccaatgcc 270  Q
    ||||||||||    
T  6867013 atccaatgcc 6867022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 154 - 251
Target Start/End: Complemental strand, 7875299 - 7875202
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 251  Q
    |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||    
T  7875299 caaaagtagcatgtctgcattggtttcaacaatattttgacttttaaaaagttaaatttatcacttttcatcattttccaatgctatatttctatttt 7875202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 153 - 294
Target Start/End: Complemental strand, 26572196 - 26572060
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||| ||||||||||||| ||||| ||||| ||||||||||  ||||||||||||||||| | ||||||||     ||||||||||||||     
T  26572196 tcaaaagtagcatgtttgcattggttttaacaatattttaacttttaaaatattaaatttatcactttttatcattttcc-----tatatttctattttt 26572102  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||| ||||||||||||| || ||||||||||||||||||||    
T  26572101 atccccttatccaatgccccaaggacaatggttagcattctc 26572060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 158 - 294
Target Start/End: Complemental strand, 16437696 - 16437568
Alignment:
Q  158 agtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatcca 257  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||        |||||||||||||| |||||||||||||||| |||||    
T  16437696 agtagcatgtttgcattggtttcaacaatatttttacttttaaaaagttaaattt--------tcaccattttccaatgttatatttctatttttatcca 16437605  T
Q  258 cttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||||||||||||| | |  |||||||||||||||||    
T  16437604 cttatccaatgccttaagagcaatggttagcattctc 16437568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 7274332 - 7274192
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||| ||| |||| |||| ||||||||||||||| |||||||||| |||||||||||||||||||  |||||||||| ||||||||||||| || |    
T  7274332 caaaagtaacatgtttgtattgatttcaacaacattttaacttttaaaatgttaaatttatcacttttcgtcattttccaatgttatatttctatattta 7274233  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    | | ||| ||||||| | ||  ||||||||||| |||||||    
T  7274232 ttcccttgtccaatgtcccaaagacaatggttaacattctc 7274192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 186 - 294
Target Start/End: Complemental strand, 29692427 - 29692319
Alignment:
Q  186 cattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcacggacaatggtt 285  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||   |||||||||||||| ||||| |||||||||||| || || ||||| ||    
T  29692427 cattttgactcttaaaaagttaaatttatcacttttcaccatttttcaatactatatttctatttttatccatttatccaatgccccaagggcaatgatt 29692328  T
Q  286 agcattctc 294  Q
    |||||||||    
T  29692327 agcattctc 29692319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 154 - 251
Target Start/End: Complemental strand, 7880545 - 7880448
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 251  Q
    |||||||||||| | || ||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| || | ||||||||||||||    
T  7880545 caaaagtagcatgtctgtattagtttcaacaatattttgacttttaaaaagttaaatttatcacttttcatcattttctaatgctatatttctatttt 7880448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 206 - 294
Target Start/End: Original strand, 32786259 - 32786346
Alignment:
Q  206 taaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||||||||| |||||||||||||||||| |||||||||||||||| |||| |||||||||| || || || |||||||||||||||||    
T  32786259 taaatttatctcttttcaccattttccaatgttatatttctatttttatcc-cttatccaataccccaagggcaatggttagcattctc 32786346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 172 - 291
Target Start/End: Complemental strand, 8324204 - 8324085
Alignment:
Q  172 attggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcct 271  Q
    |||||||||||||||||||| | |||||||||||||||||||||| ||||||| ||||  ||| | ||| |||||||||| |||  ||||| |||||||     
T  8324204 attggtttcaacaacattttaatttttaaaaagttaaatttatcatttttcacaatttctcaatgctatgtttctatttttatcttcttattcaatgccc 8324105  T
Q  272 cacggacaatggttagcatt 291  Q
    || | | |||||||||||||    
T  8324104 caagaataatggttagcatt 8324085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 154 - 270
Target Start/End: Complemental strand, 31220445 - 31220329
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||||||| || ||||||||   ||||| |||||||| ||||||||||||||||||| ||||||||| |||||||| |||    ||||||| |||| ||    
T  31220445 caaaagtagtatgtttgcattttattcaataacattttaacttttaaaaagttaaattcatcactttttaccatttttcaaaacgatatttccatttcca 31220346  T
Q  254 tccacttatccaatgcc 270  Q
    ||| |||||||||||||    
T  31220345 tcctcttatccaatgcc 31220329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 32786060 - 32786110
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaag 204  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32786060 caaaagtagcatgtttgcattggtttcaacaacattttgacttttaaaaag 32786110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 21186136 - 21186059
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 230  Q
    ||||||||||||  |||||||| | ||||| || ||||| ||||||||||||||||||| ||||||||| ||||||||    
T  21186136 tcaaaagtagcaattttgcattagattcaataatattttaacttttaaaaagttaaattcatcactttttaccatttt 21186059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 34780097 - 34780023
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccat 227  Q
    |||||||||| |||||| |||||  ||||||||  |||| |||||||||||||||||||  ||||||||||||||    
T  34780097 tcaaaagtagtatatttacattgaattcaacaatgttttaacttttaaaaagttaaattcttcacttttcaccat 34780023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 12175552 - 12175652
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    |||||||| || ||||||||||||| || ||| |||| |||||||||||||||||||||||| |||| | |||||| |||   ||||||| |||||| ||    
T  12175552 aaaagtagtatgtttgcattggttttaataac-ttttaacttttaaaaagttaaatttatcagtttttatcatttttcaatactatatttatatttttat 12175650  T
Q  255 cc 256  Q
    ||    
T  12175651 cc 12175652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 27127601 - 27127550
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattt 229  Q
    |||||||| || |||||||||||||||||||||| |||| ||||||||||||    
T  27127601 ttcaacaatatcttgacttttaaaaagttaaattcatcatttttcaccattt 27127550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 28014639 - 28014706
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    |||||||||| |||||||| ||||| ||||||||||||| ||| | |||| |||||||||||| ||||    
T  28014639 tttgcattggattcaacaatattttaacttttaaaaagtcaaactcatcatttttcaccatttcccaa 28014706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 6507508 - 6507438
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttca 223  Q
    |||||||||| |||| | |||||  ||||||||  |||||| |||||||||||||||||| ||||||||||    
T  6507508 tcaaaagtagtatatatacattgaattcaacaatgttttgatttttaaaaagttaaatttttcacttttca 6507438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 1947424 - 1947477
Alignment:
Q  182 acaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaac 235  Q
    ||||| |||||||||||| |||||| |||||| ||||||| |||||||||||||    
T  1947424 acaactttttgacttttagaaagttgaatttaacactttttaccattttccaac 1947477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 14232610 - 14232533
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 230  Q
    |||||||||| || ||| |||| | ||| ||||  ||||||||||| ||||| |||||| ||||||||||||||||||    
T  14232610 tcaaaagtagtatgtttacattagattcgacaatgttttgacttttgaaaagctaaattcatcacttttcaccatttt 14232533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 32786060 - 32786095
Alignment:
Q  71 caaaagtagcatatttgcattggtttcaacaacatt 106  Q
    |||||||||||| |||||||||||||||||||||||    
T  32786060 caaaagtagcatgtttgcattggtttcaacaacatt 32786095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 19646024 - 19646069
Alignment:
Q  190 ttgacttttaaaaagttaaatttatcacttttcaccattttccaac 235  Q
    ||||||||||||||||| |||| | |||||||||||||||| ||||    
T  19646024 ttgacttttaaaaagttgaattcaacacttttcaccatttttcaac 19646069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 29964302 - 29964367
Alignment:
Q  164 atatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattt 229  Q
    |||||| |||||  ||||||||  ||||||||||||||||||||||||  | | ||||||||||||    
T  29964302 atatttacattgaattcaacaatgttttgacttttaaaaagttaaattatttatttttcaccattt 29964367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 3e-47; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 5151480 - 5151620
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||| |    
T  5151480 caaaagtagcatgtttgcattagtttcaacaacattttgacttttaaaaagttaaatttatcatttttcatcattttccaatgttatatttctattttta 5151579  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| |||||| |||||||||  |||||||||||||| ||||    
T  5151580 tccccttatcaaatgcctcaatgacaatggttagcactctc 5151620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 154 - 291
Target Start/End: Complemental strand, 35653373 - 35653236
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| |    
T  35653373 caaaagtaccatgtttgcattggtttcaacaacattttgattttcaaaaagttaaatttatcacttttcaccattttccaatgctatatttctattttta 35653274  T
Q  254 tccacttatccaatgcctcacggacaatggttagcatt 291  Q
    ||| ||||||||||||  || || ||||||||||||||    
T  35653273 tccccttatccaatgcaccaagggcaatggttagcatt 35653236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 153 - 294
Target Start/End: Complemental strand, 4422083 - 4421942
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||| ||| |||||||||  |||||||||||||||| || ||||||||||||||||||||||||||||||||||||| | ||||||||||||||     
T  4422083 tcaaaagtaacatgtttgcattgacttcaacaacattttgatttgtaaaaagttaaatttatcacttttcaccattttccaatgctatatttctattttt 4421984  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||| |||||||||||||  | || ||||||||| |||||||    
T  4421983 atcctcttatccaatgccctaagggcaatggttaacattctc 4421942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 4962634 - 4962495
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||| |    
T  4962634 caaaagtagcatgtttgtattagtttcaacaacattttgactttaaaaaagttaaatttatcacttttcatcattttccaatgttatatttctattttta 4962535  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    | | ||||||||||| | || || |||||| ||||||||||    
T  4962534 ttc-cttatccaatgtcccaagggcaatgggtagcattctc 4962495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 153 - 273
Target Start/End: Complemental strand, 25017410 - 25017290
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||| |||| |||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||||     
T  25017410 tcaaaagtagcatgtttgtattggtttcaacgatattttgacttttaaaaagttaaatttatcacttttcacaattttccaatactatatttctattttt 25017311  T
Q  253 atccacttatccaatgcctca 273  Q
    |||| ||||||||||||||||    
T  25017310 atccccttatccaatgcctca 25017290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 34546769 - 34546909
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||| ||| |||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| |    
T  34546769 caaaagtatcatttttgcattagtttcaacaacattttaacttttaaaaaattaaatttatcacttttcaccatttttcaatgttatatttctattttta 34546868  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| |||||||||| |  || |||||||| ||| |||||||    
T  34546869 tccccttatccaatactccaaggacaatgattatcattctc 34546909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 153 - 291
Target Start/End: Complemental strand, 3639193 - 3639056
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    |||||||||  || ||||||||||||||||||| |||| |||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||     
T  3639193 tcaaaagtaatatgtttgcattggtttcaacaatattt-gacttttaaaaaattaaatttatcactcttcaccattttccaatgttatatttctattttt 3639095  T
Q  253 atccacttatccaatgcctcacggacaatggttagcatt 291  Q
    |||| ||||| ||||| |||| | |||||||||||||||    
T  3639094 atccccttattcaatgtctcaagaacaatggttagcatt 3639056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 16315650 - 16315512
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||| | ||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||| | |||||||||||||| |    
T  16315650 caaaagtagcgtgtttgcattggtttcaacaacattttgactattaaaaagtta--tttatcacttttcaccattttccaatgctatatttctattttta 16315553  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| ||||||| |||||  | || || ||||||||||||||    
T  16315552 tccccttatccgatgcccaaagggcagtggttagcattctc 16315512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 153 - 294
Target Start/End: Original strand, 39567893 - 39568034
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||||||| |||||||||||||||||||  |||||| |||||||||||||||||||||| |||||| |||||||||| | ||||||| ||||||     
T  39567893 tcaaaagtagcatgtttgcattggtttcaacaatgttttgatttttaaaaagttaaatttatcatttttcatcattttccaatgctatatttatattttt 39567992  T
Q  253 atccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||||  |||||||||||| || || ||||||||| |||||||    
T  39567993 atcccattatccaatgccccaagggcaatggttatcattctc 39568034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 28143241 - 28143101
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| |||| ||| |||||||||||||||||| |||||||||||||||||||| | |||||||||||| |||| |||||||||||||||| |    
T  28143241 caaaagtagcatgtttgtattagtttcaacaacattttgatttttaaaaagttaaatttattatttttcaccatttcccaatgttatatttctattttta 28143142  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||  ||||| ||||| | || || |||||||||||||||||    
T  28143141 tctccttattcaatgtcccaagggcaatggttagcattctc 28143101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 35945237 - 35945377
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||| || |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |    
T  35945237 caaaaatatcatatttgcattagtttcaacaacattttaacatttaaaaagttaaatttatcacttttcactattttccaatgttatatttctattttta 35945336  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    | | |||||||||| || || |  ||||| |||||||||||    
T  35945337 ttcccttatccaataccccaagagcaatgattagcattctc 35945377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 153 - 264
Target Start/End: Complemental strand, 43414183 - 43414072
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttc 252  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||     
T  43414183 tcaaaagtaacatgtttgcattggtttcaacaacattttgatttttaaaaagttaaattgatcatttttcaccattttccaatgctatatttctattttt 43414084  T
Q  253 atccacttatcc 264  Q
    |||| |||||||    
T  43414083 atccccttatcc 43414072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 1479236 - 1479114
Alignment:
Q  172 attggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcct 271  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| ||| | |||||||||||||| |||| ||||| ||||||||    
T  1479236 attggtttcaataacattttgacttttaaaaagttaaatttatcacttttcattatttttcaatgctatatttctatttttatccccttattcaatgcct 1479137  T
Q  272 cacggacaatggttagcattctc 294  Q
    || | | ||||||||||||||||    
T  1479136 caagaataatggttagcattctc 1479114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 168 - 294
Target Start/End: Original strand, 37243852 - 37243977
Alignment:
Q  168 ttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaat 267  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||  |||||||| |||||| ||||  |||||||||    
T  37243852 ttgcattgatttcaacaacattttaatttttaaaaagttaaatttatcacttttcaccattttccaatattatatttttatttttatcc-tttatccaat 37243950  T
Q  268 gcctcacggacaatggttagcattctc 294  Q
    |||||| || ||||| |||||||||||    
T  37243951 gcctcaagggcaatgattagcattctc 37243977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 166 - 270
Target Start/End: Original strand, 1759820 - 1759924
Alignment:
Q  166 atttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatcca 265  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||   |||||||||||||| |||| ||||||||    
T  1759820 atttgcattggttttaacaacattttgacttttaaaaagttaaatttatcacttttctccatttttcaatactatatttctatttttatcctcttatcca 1759919  T
Q  266 atgcc 270  Q
    |||||    
T  1759920 atgcc 1759924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 154 - 250
Target Start/End: Complemental strand, 13951354 - 13951258
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattt 250  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||| | |||||||||||||    
T  13951354 caaaagtagcatgcttgcattggtttcaacaacattttgacttttaaaaaaataaatttatcacttttcaccatttttcaatgctatatttctattt 13951258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 155 - 294
Target Start/End: Complemental strand, 338881 - 338742
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    ||||||||||| |||||||| |||||||||| ||||||| ||||||||||||||||||||||||||| | |||||| |||  | |||||| |||||| ||    
T  338881 aaaagtagcatgtttgcatttgtttcaacaatattttgatttttaaaaagttaaatttatcactttttatcatttttcaatatcatatttttatttttat 338782  T
Q  255 ccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||  |||||||||||| || || |||||||||| ||||||    
T  338781 ccctttatccaatgccccaagggcaatggttaggattctc 338742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 160 - 251
Target Start/End: Complemental strand, 12068286 - 12068195
Alignment:
Q  160 tagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 251  Q
    |||||| |||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  12068286 tagcatgtttgtattggtgtcaataacattttgacttttaaaaagttaaatttatcacttttcaccattttccaatactatatttctatttt 12068195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 154 - 249
Target Start/End: Original strand, 12914166 - 12914261
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatt 249  Q
    ||||||||| || ||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||| ||| | ||||||||||||    
T  12914166 caaaagtagtatgtttgcattggtttcaacaatattttgatttttaaaaaattaaatttatcacttttcaccatttttcaatgctatatttctatt 12914261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 8410133 - 8410273
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||| |||||| |||| |||||||| || ||||||||||||||||||||||||||||||||| |||| ||||||||| ||   ||||||| |||||| |    
T  8410133 caaaactagcatgtttgtattggttttaataacattttgacttttaaaaagttaaatttatcattttttaccattttctaatactatatttttattttta 8410232  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| |||||| ||| || ||  | |||||||||||||||||    
T  8410233 tccccttatctaataccccaaaggcaatggttagcattctc 8410273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 183 - 269
Target Start/End: Original strand, 27823279 - 27823365
Alignment:
Q  183 caacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgc 269  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||   |||||||||||||| |||| ||||||||||||    
T  27823279 caacattttaatttttaaaaagttaaatttatcacttttcaccattttccaatactatatttctatttttatccccttatccaatgc 27823365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 167 - 273
Target Start/End: Complemental strand, 25568397 - 25568290
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccac-ttatcca 265  Q
    |||||||||||||||| |||||||||| |||||||||||||||| |||||||||||| |||||| ||| | ||||||| |||||| |||| | |||||||    
T  25568397 tttgcattggtttcaataacattttgatttttaaaaagttaaatgtatcacttttcatcatttttcaatgctatatttatatttttatcccctttatcca 25568298  T
Q  266 atgcctca 273  Q
    || |||||    
T  25568297 atacctca 25568290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 158 - 294
Target Start/End: Complemental strand, 10017733 - 10017600
Alignment:
Q  158 agtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttcatcca 257  Q
    ||||| || ||||||||||||| ||||||||||| |||||||||||||||  ||||||| |||||||||||| |||    |||||||||||||| ||||     
T  10017733 agtagtatgtttgcattggttttaacaacattttaacttttaaaaagtta--tttatcaattttcaccattt-ccagtactatatttctatttttatcct 10017637  T
Q  258 cttatccaatgcctcacggacaatggttagcattctc 294  Q
    |||||| |||| |||  |||||||||||| |||||||    
T  10017636 cttatcaaatgtctctaggacaatggttaacattctc 10017600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 15915871 - 15915960
Alignment:
Q  202 aagttaaatttatcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctcacggacaatggttagcatt 291  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| || | ||||||||||||| || |  ||||||||||||||    
T  15915871 aagttaaatttatcacttttcaccattttccaatgctatatttctatttttattcccttatccaatgccccaagtgcaatggttagcatt 15915960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 161 - 293
Target Start/End: Original strand, 40099333 - 40099461
Alignment:
Q  161 agcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcacca-ttttccaacgttatatttctattttcatccact 259  Q
    ||||||||||||||| ||||||||   |||  | |||||||| ||||||||||||||||||||||| |||| ||| | ||||||| ||||||  ||| ||    
T  40099333 agcatatttgcattgatttcaaca---tttcaatttttaaaaggttaaatttatcacttttcaccattttttcaatgctatatttttatttt--tcccct 40099427  T
Q  260 tatccaatgcctcacggacaatggttagcattct 293  Q
    ||||||||||| || |||||||||||| ||||||    
T  40099428 tatccaatgccacaaggacaatggttaacattct 40099461  T

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Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 39335477 - 39335540
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 230  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  39335477 tttgtattggattcaacaacattttgacttttaaaaagttaaattcatcactttttactatttt 39335540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 10406779 - 10406854
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 230  Q
    |||||||| ||| |||||||||| |||||||| ||||||| ||| ||||| |||||||||||||||||| |||||||    
T  10406779 caaaagtaacatttttgcattggattcaacaatattttgaatttaaaaaa-ttaaatttatcacttttctccatttt 10406854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 39069370 - 39069314
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    |||||||| |||||||||||||||| |||||||| |||||||||||| |||||||||    
T  39069370 ttcaacaatattttgacttttaaaatgttaaattcatcacttttcacaattttccaa 39069314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 39693000 - 39693090
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatt 243  Q
    ||||||||| ||| |||| |||| ||||||||| ||||| |||||||||||| ||||||||||| |||| |||| ||| ||| | ||||||    
T  39693000 tcaaaagtaacatgtttgtattgatttcaacaatattttaacttttaaaaagataaatttatcattttttaccacttttcaatgctatatt 39693090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 6823859 - 6823770
Alignment:
Q  166 atttgcattggtttcaacaacattttgacttttaaaaagtt-aaatttatcacttttcaccattttccaacgttatatttctattttcat 254  Q
    ||||||||||| |||||||| ||||| |||||||||||||| |||||||| ||||| |||| |||||| |    ||||||||||||||||    
T  6823859 atttgcattggattcaacaatattttaacttttaaaaagttaaaatttattactttccaccgttttccgatacaatatttctattttcat 6823770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 16899677 - 16899635
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaa 209  Q
    |||| ||||| ||||||||||||||||||||||||||||||||    
T  16899677 tttgtattggattcaacaacattttgacttttaaaaagttaaa 16899635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 256
Target Start/End: Complemental strand, 39042153 - 39042051
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    ||||| |||||| ||| |||||   ||||||||||||| ||||||||||| ||||||| | || ||||||  ||||| ||| ||||||||| |||||| |    
T  39042153 caaaaatagcatgtttacattgacatcaacaacattttaacttttaaaaaattaaattaaccatttttcattattttacaatgttatatttttattttta 39042054  T
Q  254 tcc 256  Q
    |||    
T  39042053 tcc 39042051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 3015144 - 3015071
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 251  Q
    |||||||| ||||| ||||||||||||||||||| |||| ||| ||| |||||| |||   |||||||||||||    
T  3015144 ttcaacaatattttaacttttaaaaagttaaattaatcattttacactattttctaacacaatatttctatttt 3015071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 678465 - 678521
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    ||||||||  |||| |||||||||| |||||||| || |||||||||||||||||||    
T  678465 ttcaacaattttttaacttttaaaaggttaaattcattacttttcaccattttccaa 678521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 10163720 - 10163668
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 230  Q
    |||| ||| |||||||||||||||||||||||||  |||||||||||| ||||    
T  10163720 ttcagcaatattttgacttttaaaaagttaaattcttcacttttcaccctttt 10163668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 24288517 - 24288553
Alignment:
Q  193 acttttaaaaagttaaatttatcacttttcaccattt 229  Q
    |||||||||||||||||| ||||||||||||||||||    
T  24288517 acttttaaaaagttaaatctatcacttttcaccattt 24288553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 24373704 - 24373668
Alignment:
Q  193 acttttaaaaagttaaatttatcacttttcaccattt 229  Q
    |||||||||||||||||| ||||||||||||||||||    
T  24373704 acttttaaaaagttaaatctatcacttttcaccattt 24373668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 39167587 - 39167666
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    ||||||||  |||||| |||||  || |||||  |||||| |||||||||||||||||| | |||||||||||||||||||    
T  39167587 caaaagtaatatatttacattgaatttaacaatgttttgatttttaaaaagttaaattt-ttacttttcaccattttccaa 39167666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 230
Target Start/End: Original strand, 5058777 - 5058812
Alignment:
Q  195 ttttaaaaagttaaatttatcacttttcaccatttt 230  Q
    |||||||||||||||||||||||||||||| |||||    
T  5058777 ttttaaaaagttaaatttatcacttttcacaatttt 5058812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 12349628 - 12349585
Alignment:
Q  188 ttttgacttttaaaaagttaaatttatcacttttcaccattttc 231  Q
    |||| ||||||||||||| |||| ||||||||||||||||||||    
T  12349628 ttttaacttttaaaaagtcaaatctatcacttttcaccattttc 12349585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 273
Target Start/End: Original strand, 27535114 - 27535205
Alignment:
Q  183 caacattttgacttttaaaaagttaaattt-atcacttttcaccattttccaacgttatatttctattttcatccacttatccaatgcctca 273  Q
    ||||||||| ||||||||||| ||||| || |||||||||||||||||| |||    |||||| |||||| ||||  |||| ||||||||||    
T  27535114 caacattttaacttttaaaaacttaaaattcatcacttttcaccatttttcaatacaatatttatatttttatccttttattcaatgcctca 27535205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 28599759 - 28599692
Alignment:
Q  167 tttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    |||||||||  ||||| ||  |||| ||||||||||||| |||||||||| ||||||| |||||||||    
T  28599759 tttgcattgaattcaataaatttttaacttttaaaaagtcaaatttatcatttttcactattttccaa 28599692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 4838272 - 4838322
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaag 204  Q
    ||||| || ||| |||||||| |||||||||| ||||||||||||||||||    
T  4838272 caaaaataacatgtttgcattagtttcaacaatattttgacttttaaaaag 4838322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 38610386 - 38610313
Alignment:
Q  178 ttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctatttt 251  Q
    ||||||||  ||||||||||||||||||||||||  |||||||| | |||||| ||| |  || ||||||||||    
T  38610386 ttcaacaatgttttgacttttaaaaagttaaattcttcactttttatcatttttcaatgcaatgtttctatttt 38610313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 81; Significance: 1e-37; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 16889 - 16750
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||| ||||| ||| | |||||||||||||| |    
T  16889 caaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttacatttatcatttttcactatttt-caatgctatatttctattttta 16791  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| |||||||||||||  | || |||||||||||||||||    
T  16790 tccccttatccaatgccctatgggcaatggttagcattctc 16750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 27057 - 26918
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||| ||||| ||| | |||||||||||||| |    
T  27057 caaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttacatttatcatttttcactatttt-caatgctatatttctattttta 26959  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| |||||||||||||  | || |||||||||||||||||    
T  26958 tccccttatccaatgccctatgggcaatggttagcattctc 26918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 37223 - 37084
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaacgttatatttctattttca 253  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||| ||||| ||| | |||||||||||||| |    
T  37223 caaaagtagcatgtttgcattggtttcaacaatattttgacttttaaaaagttacatttatcatttttcactatttt-caatgctatatttctattttta 37125  T
Q  254 tccacttatccaatgcctcacggacaatggttagcattctc 294  Q
    ||| |||||||||||||  | || |||||||||||||||||    
T  37124 tccccttatccaatgccctatgggcaatggttagcattctc 37084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 392249 - 392174
Alignment:
Q  155 aaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccatttt 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  392249 aaaagtagcatgtttgcatcggtttcaacaacattttgacttttaaaaagttaaatttatcactttttaccatttt 392174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 4765 - 4705
Alignment:
Q  153 tcaaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaattta 213  Q
    ||||||||||||| ||||||||  |||||||||||| ||||||||||||||||||||||||    
T  4765 tcaaaagtagcatgtttgcattaatttcaacaacatattgacttttaaaaagttaaattta 4705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 4337 - 4286
Alignment:
Q  205 ttaaatttatcacttttcaccattttccaacgttatatttctattttcatcc 256  Q
    |||||||||||||||||||| ||||||||| | ||||||| |||||| ||||    
T  4337 ttaaatttatcacttttcacaattttccaatgctatatttttatttttatcc 4286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 37483 - 37428
Alignment:
Q  168 ttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttca 223  Q
    ||||||||| ||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  37483 ttgcattggattcaataacattttgacttttgaaaagttaaattcatcatttttca 37428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 39580 - 39658
Alignment:
Q  154 caaaagtagcatatttgcattggtttcaacaacattttgacttttaaaaagttaaatttatcacttttcaccattttccaa 234  Q
    ||||||||| |||||| |||||  ||||||||  | ||||||||||||||||||||||  ||| ||||||| |||||||||    
T  39580 caaaagtagtatatttacattgaattcaacaa--tgttgacttttaaaaagttaaattcttcagttttcactattttccaa 39658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 9092 - 9045
Alignment:
Q  188 ttttgacttttaaaaagttaaatttatcacttttcaccattttccaac 235  Q
    ||||||||||||||||||| |||| | |||||||||||||||| ||||    
T  9092 ttttgacttttaaaaagttgaattcaacacttttcaccatttttcaac 9045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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