View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0124-Insertion-4 (Length: 755)
Name: NF0124-Insertion-4
Description: NF0124
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0124-Insertion-4 |
 | |
|
| [»] chr6 (33 HSPs) |
| |
|
| [»] chr7 (2 HSPs) |
| |
|
| [»] chr5 (3 HSPs) |
| |
|
Alignment Details
Target: chr6 (Bit Score: 645; Significance: 0; HSPs: 33)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 645; E-Value: 0
Query Start/End: Original strand, 7 - 755
Target Start/End: Complemental strand, 22900270 - 22899506
Alignment:
| Q |
7 |
aagtatcaaatgacacccccaacaagttatataggctaattctcaagggttttatgctttggatatacttctcttgaatgctactaattctcctttttta |
106 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22900270 |
aagtatcaaatgacactcccaacaagttatataggctaattctcaagggttttatgctttggatatacttctcttgaatgctactaattctcctttttta |
22900171 |
T |
|
| Q |
107 |
agaacaatggcatatgcttgaaggagctagtatcatatatagtcttgaaataagtttttccattaatattctttctttattatttttcatgttcagcttt |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
22900170 |
agaacaatggcatatgcttgaaggagctagtatcatatatagtcttgaaataagtttttccattaagattctttctttattatttttcatgttcagcttt |
22900071 |
T |
|
| Q |
207 |
tagaaatagaatcata---tgctccattttatgaagtggttgagagaccacatccaatgtcataaggtaaaagttatcaccagttcataatatatgaaag |
303 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22900070 |
tagaaatagaatcataatatgctccattttatgaagtggttgagagaacacatccaatgtcataaggtaaaagttatcaccacttcataatatatgaaag |
22899971 |
T |
|
| Q |
304 |
agattgcacacaaggaattaaaattttataccgatatgttttcttctcttctgtgtctttgtttgaaattagaagaatcgaatttccacctcactatttg |
403 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22899970 |
agattgcacaaaaggaattaaaattttataccgatatgttttcttctcttttgtgtctttgtttgaaattagaaggatcgaatttccacctcactatttg |
22899871 |
T |
|
| Q |
404 |
cctcatttagtgtgctatgtttcaactgtattagaataatgaagtcattctttcaaagcaatatagattctctctttagatatgattaaaaaatactatg |
503 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
22899870 |
cctcatttagtgtgctatgtttcaactgtattagaataatgaagtcattctttcaaagcaatatagattctctctttagatatgattaaaaaatactcta |
22899771 |
T |
|
| Q |
504 |
attttatatattcacagcttctgttttctacttctttaaagtgcaagaattgggaggatgga-caaaaacgctactcagttttgaccattcgctatcatg |
602 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
22899770 |
attttatatattcacagcttctgttttctacttctttaaagtgcaagaattgggaggatggaccaaaaacgccactgagttttgaccattcgctatcatg |
22899671 |
T |
|
| Q |
603 |
aataaaccaattaatgtgccaaagaaaacaactgtttttggatatccatggtataacccacaaatatatatgccaat---------gcttattccatctt |
693 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
22899670 |
aataaaccaattaatgtgccaaagaaaacaactgtttttggatatccatggtataacccacaaatatatataccaatgtttcattggcttattccatctt |
22899571 |
T |
|
| Q |
694 |
gttatagggtttttctaacctatgcaa---tggataggataaggtgcaataaatgtacctctttt |
755 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
22899570 |
gttatagggtttttctaacctatgcaacattgcataggataaggtgcaataaatgtacctctttt |
22899506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 641; E-Value: 0
Query Start/End: Original strand, 7 - 755
Target Start/End: Complemental strand, 22882335 - 22881571
Alignment:
| Q |
7 |
aagtatcaaatgacacccccaacaagttatataggctaattctcaagggttttatgctttggatatacttctcttgaatgctactaattctcctttttta |
106 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22882335 |
aagtatcaaatgacactcccaacaagttatataggctaattctcaagggttttatgctttggatatacttctcttgaatgctactaattctcctttttta |
22882236 |
T |
|
| Q |
107 |
agaacaatggcatatgcttgaaggagctagtatcatatatagtcttgaaataagtttttccattaatattctttctttattatttttcatgttcagcttt |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
22882235 |
agaacaatggcatatgcttgaaggagctagtatcatatatagtcttgaaataagtttttccattaagattctttctttattatttttcatgttcagcttt |
22882136 |
T |
|
| Q |
207 |
tagaaatagaatcata---tgctccattttatgaagtggttgagagaccacatccaatgtcataaggtaaaagttatcaccagttcataatatatgaaag |
303 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| | |
|
|
| T |
22882135 |
tagaaatagaatcataatatgctccattttatgcagtggttgagagaacacatccaatgtcataaggtaaaagttatcaccacttcataatatatgaatg |
22882036 |
T |
|
| Q |
304 |
agattgcacacaaggaattaaaattttataccgatatgttttcttctcttctgtgtctttgtttgaaattagaagaatcgaatttccacctcactatttg |
403 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22882035 |
agattgcacaaaaggaattaaaattttatactgatatgttttcttctcttttgtgtctttgtttgaaattagaaggatcgaatttccacctcactatttg |
22881936 |
T |
|
| Q |
404 |
cctcatttagtgtgctatgtttcaactgtattagaataatgaagtcattctttcaaagcaatatagattctctctttagatatgattaaaaaatactatg |
503 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
22881935 |
cctcatttagtgtgctatgtttcaactgtattagaataatgaagtcattctttcaaagcaatatagattctctctttagatatgattaaaaaatactctg |
22881836 |
T |
|
| Q |
504 |
attttatatattcacagcttctgttttctacttctttaaagtgcaagaattgggaggatgga-caaaaacgctactcagttttgaccattcgctatcatg |
602 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22881835 |
attttatatattcacagcttctgttttctacttctttaaagtgcaagaattgggaggatggaccaaaaacgctactgagttttgaccattcgctatcatg |
22881736 |
T |
|
| Q |
603 |
aataaaccaattaatgtgccaaagaaaacaactgtttttggatatccatggtataacccacaaatatatatgccaat---------gcttattccatctt |
693 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
22881735 |
aataaaccaattaatgtgccaaagaaaacaactgtttttgaatatccatggtataacccacaaatatatatgccaatgtttcattggcttattccatctt |
22881636 |
T |
|
| Q |
694 |
gttatagggtttttctaacctatgcaa---tggataggataaggtgcaataaatgtacctctttt |
755 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
22881635 |
gttatagggtttttctaacctatgcaacattgcataggataaggtgcaataaatgtacctctttt |
22881571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 486; E-Value: 0
Query Start/End: Original strand, 7 - 571
Target Start/End: Complemental strand, 22915263 - 22914696
Alignment:
| Q |
7 |
aagtatcaaatgacacccccaacaagttatataggctaattctcaagggttttatgctttggatatacttctcttgaatgctactaattctcctttttta |
106 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
22915263 |
aagtatcaaatgacactcccaacaagttatataggctaattctcaagggttttatgcttaggatatacttctcttgaatgctactacttctcctttttta |
22915164 |
T |
|
| Q |
107 |
agaacaatggcatatgcttgaaggagctagtatcatatatagtcttgaaataagtttttccattaatattctttctttattatttttcatgttcagcttt |
206 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
22915163 |
agaacaatggcatatgcttgaaggaactagtatcatatatagtcttgaaataagtttttccattaagattctttctttattatttttcatgttcagcttt |
22915064 |
T |
|
| Q |
207 |
tagaaatagaatcata---tgctccattttatgaagtggttgagagaccacatccaatgtcataaggtaaaagttatcaccagttcataatatatgaaag |
303 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
22915063 |
tagaaatagaatcataatatgctccattttatgaagtggttgagagaccacatccaatgtcataaggtaaaatttatcaccacttcataatatatgaaag |
22914964 |
T |
|
| Q |
304 |
agattgcacacaaggaattaaaattttataccgatatgttttcttctcttctgtgtctttgtttgaaattagaagaatcgaatttccacctcactatttg |
403 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
22914963 |
agattgcacacaaggaattaaaatttgataccgatatgttttcttctcatttgtgtctttgtttgaaattagaagaatcaaatttccacctcactgtttg |
22914864 |
T |
|
| Q |
404 |
cctcatttagtgtgctatgtttcaactgtattagaataatgaagtcattctttcaaagcaatatagattctctctttagatatgattaaaaaatactatg |
503 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| || |
|
|
| T |
22914863 |
cctcatttagtgtgctatgtttcaactgtattagaagaatgaagtcattctttcaaaacaatatagattctctgtttagatatgattaaaaaatactctg |
22914764 |
T |
|
| Q |
504 |
attttatatattcacagcttctgttttctacttctttaaagtgcaagaattgggaggatggacaaaaa |
571 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
22914763 |
attttatatattcacagcttctgttttctacttctttaaagtgcaagaattgggaggatggaccaaaa |
22914696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 340 - 680
Target Start/End: Original strand, 22961006 - 22961343
Alignment:
| Q |
340 |
tgttttcttctcttctgtgtctttgtttgaaattagaagaatcgaatttccacctcactatttgcctcatttagtgtgctatgtttcaactgtattagaa |
439 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
22961006 |
tgttttcttctcttttgtgtctttgtttgaaattagaagaatcgaatttccacctcactgtttgcctcatttagtgtactatgtttcaactgtattagaa |
22961105 |
T |
|
| Q |
440 |
taatgaagtcattctttcaaagcaatatagattctctctttagatatgattaaaaaatactatgattttatatattcacagcttctgttttctacttctt |
539 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||| ||||||| |
|
|
| T |
22961106 |
gaatgaagtcattctttcaaagcagtatagattctctctttagatatgataaaaaaatactctgattt----tattcacagcttatgttttacacttctt |
22961201 |
T |
|
| Q |
540 |
taaagtgcaagaattgggaggatgga-caaaaacgctactcagttttgaccattcgctatcatgaataaaccaattaatgtgccaaagaaaacaactgtt |
638 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22961202 |
taaagtgcaagaattgggaggatggaccaaaaacgctactgagttttgaccattcgctatcatgaataaaccaattaatgtgccaaagaaaacaactgtt |
22961301 |
T |
|
| Q |
639 |
tttggatatccatggtataacccacaaatatatatgccaatg |
680 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22961302 |
tttggatatccatggtataacccacaaatatatatgccaatg |
22961343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 340 - 671
Target Start/End: Complemental strand, 23827386 - 23827057
Alignment:
| Q |
340 |
tgttttcttctcttctgtgtctttgtttgaaattagaagaatcgaatttccacctcactatttgcctcatttagtgtgctatgtttcaactgtattagaa |
439 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
23827386 |
tgttttcttctcttttgtgtctttgtttgaaattagaagaatcgaatttccacctcactgtttgcctcatttagtgtactatgtttcaactgtattagaa |
23827287 |
T |
|
| Q |
440 |
taatgaagtcattctttcaaagcaatatagattctctctttagatatgattaaaaaatactatgattttatatattcacagcttctgttttctacttctt |
539 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||| ||||||| |
|
|
| T |
23827286 |
gaatgaagtcattctttcaaagcagtatagattctctctttagatatgataaaaaaatactctgattt----tattcacagcttatgttttacacttctt |
23827191 |
T |
|
| Q |
540 |
taaagtgcaagaattgggaggatgga-caaaaacgc-tactcagttttgaccattcgctatcatgaataaaccaattaatgtgccaaagaaaacaactgt |
637 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23827190 |
taaagtgcaagaattgggaggatggaccaaaaacgcttactgagttttgaccactcgctatcatgaataaaccaattaatgtgccaaagaaaacaactgt |
23827091 |
T |
|
| Q |
638 |
ttttggatatccatggtataacccacaaatatat |
671 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
23827090 |
ttttggatatccatggtataacccacaaatatat |
23827057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 6 - 313
Target Start/End: Original strand, 22966306 - 22966615
Alignment:
| Q |
6 |
caagtatcaaatgacacccccaacaagttatataggctaattctcaagggttttatgctttggatatacttctcttgaatgctactaattctcctttttt |
105 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
22966306 |
caagtatcgaatgacactcccaacaagttatataggctaattctcaagggttttatgctttggatatacttctcttaaatgctactaattcccctttttt |
22966405 |
T |
|
| Q |
106 |
aagaacaatggcatatgcttgaaggagct-agtatcatatatagtcttgaaataagtttttccattaatattctttctttattatttttcatgttcagct |
204 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||||||| |||||||||||||| |||||||||| ||||||| ||||||||| ||||||||||||| |
|
|
| T |
22966406 |
cagaacaatggcatatgcttgaaggagctaaatatcatatgtagtcttgaaataaaaatttccattaagattctttttttattattcttcatgttcagct |
22966505 |
T |
|
| Q |
205 |
tttagaaatagaatc---atatgctccattttatgaagtggttgagagaccacatccaatgtcataaggtaaaagttatcaccagttcataatatatgaa |
301 |
Q |
| |
|
||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||| |
|
|
| T |
22966506 |
ttttaaaatagaatcacaatatgctccattttatgaagctgttgagagaccacatccaatgtcataagttaaaagtcatcaccacttcata--atatgaa |
22966603 |
T |
|
| Q |
302 |
agagattgcaca |
313 |
Q |
| |
|
|||||||||||| |
|
|
| T |
22966604 |
agagattgcaca |
22966615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 6 - 313
Target Start/End: Complemental strand, 23822087 - 23821778
Alignment:
| Q |
6 |
caagtatcaaatgacacccccaacaagttatataggctaattctcaagggttttatgctttggatatacttctcttgaatgctactaattctcctttttt |
105 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
23822087 |
caagtatcgaatgacactcccaacaagttatataggctaattctcaagggttttatgctttggatatacttctcttaaatgctactaattcccctttttt |
23821988 |
T |
|
| Q |
106 |
aagaacaatggcatatgcttgaaggagct-agtatcatatatagtcttgaaataagtttttccattaatattctttctttattatttttcatgttcagct |
204 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||||||| |||||||||||||| |||||||||| ||||||| ||||||||| ||||||||||||| |
|
|
| T |
23821987 |
cagaacaatggcatatgcttgaaggagctaaatatcatatgtagtcttgaaataaaaatttccattaagattctttttttattattcttcatgttcagct |
23821888 |
T |
|
| Q |
205 |
tttagaaatagaatc---atatgctccattttatgaagtggttgagagaccacatccaatgtcataaggtaaaagttatcaccagttcataatatatgaa |
301 |
Q |
| |
|
||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||| |
|
|
| T |
23821887 |
ttttaaaatagaatcacaatatgctccattttatgaagctgttgagagaccacatccaatgtcataagttaaaagtcatcaccacttcata--atatgaa |
23821790 |
T |
|
| Q |
302 |
agagattgcaca |
313 |
Q |
| |
|
|||||||||||| |
|
|
| T |
23821789 |
agagattgcaca |
23821778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 22869478 - 22869263
Alignment:
| Q |
6 |
caagtatcaaatgacacccccaacaagttatataggctaattctcaagggttttatgctttggatatacttctcttgaatgctactaattctcctttttt |
105 |
Q |
| |
|
|||||||||| | |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| |||||||| |
|
|
| T |
22869478 |
caagtatcaagttacactcccaacaagttatataggctaattctctagggttttatgctttggatatacttctcttgagtgctactacttcccctttttt |
22869379 |
T |
|
| Q |
106 |
aagaacaatggcatatgcttgaaggagct-agtatcatatatagtcttgaaataagtttttccattaatattctttctttattatttttcatgttcagct |
204 |
Q |
| |
|
|||||||||| ||||||||||||||||| | ||||||||||| ||||||| | ||||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
22869378 |
cagaacaatgggatatgcttgaaggagctaaatatcatatataatcttgaatttttattttccattaagattttttctttattatttttcatgttcagct |
22869279 |
T |
|
| Q |
205 |
tttagaaatagaatca |
220 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
22869278 |
ttttgaaatagaatca |
22869263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 26 - 296
Target Start/End: Complemental strand, 18127334 - 18127056
Alignment:
| Q |
26 |
caacaagttatataggctaattctcaagggttttatgctttggatatacttctcttgaatgctactaattctccttttttaagaacaatggcatatgctt |
125 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||| | |||||||| ||||| ||||||||||||| |
|
|
| T |
18127334 |
caacaagttatataagctaattctcgagggtttaatgctttggatatacttctcttgaatgctactg---cccctttttttagaacgatggcatatgctt |
18127238 |
T |
|
| Q |
126 |
gaaggagctag-tatcatatatagtcttgaaataagtttttccattaatattctttctttattatttttcatgttcagcttttagaaatagaatc---at |
221 |
Q |
| |
|
||| |||||| |||||||||| |||||||| | ||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||| || |
|
|
| T |
18127237 |
gaaagagctaaatatcatatatggtcttgaatttttattttccattaagattctttctttattatttttcaagttcagctttttgaaatagaatcacaat |
18127138 |
T |
|
| Q |
222 |
atgctccattttatgaagtggttgagagaccacat-------ccaatgtcataaggtaaaagttatcaccagttcataatat |
296 |
Q |
| |
|
||||||||||| ||||||| |||||| |||||||| ||||||||||||||||||||| || |||| |||||||||| |
|
|
| T |
18127137 |
atgctccatttcatgaagttgttgagtgaccacatccaatgaccaatgtcataaggtaaaagtcattaccacttcataatat |
18127056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 6 - 197
Target Start/End: Original strand, 22984564 - 22984758
Alignment:
| Q |
6 |
caagtatcaaatgacacccccaacaagttatataggctaattctcaagggttttatgctttggatatacttctcttgaatgctactaattctcctttttt |
105 |
Q |
| |
|
|||||||| |||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
22984564 |
caagtatcgaatgacactcccaacaagatatataggctgattctcaagggttttatgctttggatatacttctcttgaatgctactacttcccctttttt |
22984663 |
T |
|
| Q |
106 |
aagaacaatggcatatgcttgaaggagct-agtatcatatatagtcttgaaataagtttttcc--attaatattctttctttattatttttcatg |
197 |
Q |
| |
|
|||||||||| ||||||||||||||||| | ||||||||||| |||||||||||| |||||| |||| |||||||||||||||| ||||||| |
|
|
| T |
22984664 |
cagaacaatggaatatgcttgaaggagctaaatatcatatataatcttgaaataaggttttccatattatgattctttctttattatatttcatg |
22984758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 6 - 197
Target Start/End: Complemental strand, 23803854 - 23803660
Alignment:
| Q |
6 |
caagtatcaaatgacacccccaacaagttatataggctaattctcaagggttttatgctttggatatacttctcttgaatgctactaattctcctttttt |
105 |
Q |
| |
|
|||||||| |||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
23803854 |
caagtatcgaatgacactcccaacaagatatataggctgattctcaagggttttatgctttggatatacttctcttgaatgctactacttcccctttttt |
23803755 |
T |
|
| Q |
106 |
aagaacaatggcatatgcttgaaggagct-agtatcatatatagtcttgaaataagtttttcc--attaatattctttctttattatttttcatg |
197 |
Q |
| |
|
|||||||||| ||||||||||||||||| | ||||||||||| |||||||||||| |||||| |||| |||||||||||||||| ||||||| |
|
|
| T |
23803754 |
cagaacaatggaatatgcttgaaggagctaaatatcatatataatcttgaaataaggttttccatattatgattctttctttattatatttcatg |
23803660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 338 - 566
Target Start/End: Original strand, 22966728 - 22966962
Alignment:
| Q |
338 |
tatgttttcttctcttctgtgtctttgtttgaaattagaagaatc----gaatttccacctcactatttgcctcatttagtgtgctatgtttcaactgta |
433 |
Q |
| |
|
||||||||||||| || |||||||| ||||||||||| ||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
22966728 |
tatgttttcttctttt-tgtgtctt-gtttgaaattaaaagaatcaatttaatttccacatcactgtttgcctcatttagtgtgctatgtttcaactgta |
22966825 |
T |
|
| Q |
434 |
ttagaataatgaagtcattctttcaaagcaatatagattctctctttagatatgattaa--------aaaatactatgattttatatattcacagcttct |
525 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||||| |||||| |||||||||||||| |
|
|
| T |
22966826 |
ttagaagaatgaagtcattgtttcaaagcaatatagattctcactttagatatgataaaaaataaataaaatactctgattt----tattcacagcttct |
22966921 |
T |
|
| Q |
526 |
gttttctacttctttaaagtgcaagaattgggaggatggac |
566 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
22966922 |
gttttccacttctttaaagtgcaagaattgggaggatggac |
22966962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 338 - 566
Target Start/End: Complemental strand, 23821665 - 23821431
Alignment:
| Q |
338 |
tatgttttcttctcttctgtgtctttgtttgaaattagaagaatc----gaatttccacctcactatttgcctcatttagtgtgctatgtttcaactgta |
433 |
Q |
| |
|
||||||||||||| || |||||||| ||||||||||| ||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
23821665 |
tatgttttcttctttt-tgtgtctt-gtttgaaattaaaagaatcaatttaatttccacatcactgtttgcctcatttagtgtgctatgtttcaactgta |
23821568 |
T |
|
| Q |
434 |
ttagaataatgaagtcattctttcaaagcaatatagattctctctttagatatgattaa--------aaaatactatgattttatatattcacagcttct |
525 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||||| |||||| |||||||||||||| |
|
|
| T |
23821567 |
ttagaagaatgaagtcattgtttcaaagcaatatagattctcactttagatatgataaaaaataaataaaatactctgattt----tattcacagcttct |
23821472 |
T |
|
| Q |
526 |
gttttctacttctttaaagtgcaagaattgggaggatggac |
566 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
23821471 |
gttttccacttctttaaagtgcaagaattgggaggatggac |
23821431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 26 - 296
Target Start/End: Complemental strand, 22855644 - 22855366
Alignment:
| Q |
26 |
caacaagttatataggctaattctcaagggttttatgctttggatatacttctcttgaatgctactaattctccttttttaagaacaatggcatatgctt |
125 |
Q |
| |
|
|||||||||||||| ||| |||||| ||||||| || |||||||||||||||||||||||| |||| | |||||||| ||||||||||||||||||| |
|
|
| T |
22855644 |
caacaagttatataagctgattctcgagggtttaattctttggatatacttctcttgaatgatactg---cccctttttttagaacaatggcatatgctt |
22855548 |
T |
|
| Q |
126 |
gaaggagctag-tatcatatatagtcttgaaataagtttttccattaatattctttctttattatttttcatgttcagcttttagaaatagaatc---at |
221 |
Q |
| |
|
||| |||||| |||||||||| |||||||| | ||||||| ||| |||||||||||||||||||||| ||||||||||| ||||||||||| || |
|
|
| T |
22855547 |
gaaagagctaaatatcatatattgtcttgaatttttattttccaataagattctttctttattatttttcaagttcagctttttgaaatagaatcacaat |
22855448 |
T |
|
| Q |
222 |
atgctccattttatgaagtggttgagagaccacat-------ccaatgtcataaggtaaaagttatcaccagttcataatat |
296 |
Q |
| |
|
||||||||||| ||||||| |||||| |||||||| ||||||||||||||||||||| || |||| |||||||||| |
|
|
| T |
22855447 |
atgctccatttcatgaagttgttgagtgaccacatccaatgaccaatgtcataaggtaaaagtcattaccacttcataatat |
22855366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 338 - 545
Target Start/End: Original strand, 22984927 - 22985130
Alignment:
| Q |
338 |
tatgttttcttctcttctgtgtctttgtttgaaattagaagaatcgaatttccacctcactatttgcctcatttagtgtgctatgtttcaactgtattag |
437 |
Q |
| |
|
|||||||||||||||| | | |||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
22984927 |
tatgttttcttctcttttatatctttgtttgaaattagaagaatcaaatttccacatcactgtttgcctcatttagtgtactatgtttcaactgtactag |
22985026 |
T |
|
| Q |
438 |
aataatgaagtcattctttcaaagcaatatagattctctctttagatatgattaaaaaatactatgattttatatattcacagcttctgttttctacttc |
537 |
Q |
| |
|
| |||||||||||||||| |||||||||||||| |||||||||||||||| | |||| ||| |||||| ||||||||| |||||||||| | ||| |
|
|
| T |
22985027 |
aggaatgaagtcattctttgaaagcaatatagatattctctttagatatgataagaaaagactctgattt----tattcacagtttctgttttccatttc |
22985122 |
T |
|
| Q |
538 |
tttaaagt |
545 |
Q |
| |
|
|||||||| |
|
|
| T |
22985123 |
tttaaagt |
22985130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 347 - 496
Target Start/End: Complemental strand, 22869103 - 22868955
Alignment:
| Q |
347 |
ttctcttctgtgtctttgtttgaaattagaagaatcgaatttccacctcactatttgcctcatttagtgtgctatgtttcaactgtattagaataatgaa |
446 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||| ||||||| ||||||| ||| ||||||| ||||| |||||||| |||| |||| |||||||||| |
|
|
| T |
22869103 |
ttctcttttgtgtctttttttgaaattagaagaatcaaatttccgcctcactgtttacctcatt-agtgtactatgtttgaactctattggaataatgaa |
22869005 |
T |
|
| Q |
447 |
gtcattctttcaaagcaatatagattctctctttagatatgattaaaaaa |
496 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
22869004 |
gtcattatttcaaagcaataaagattctctctttagatatgataaaaaaa |
22868955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 338 - 608
Target Start/End: Complemental strand, 22855281 - 22854997
Alignment:
| Q |
338 |
tatgttttcttctcttctgtgtctttgtttgaaattagaagaatcgaatttccacctcactatttgcctcatttagtgtgctatgtttcaactgtattag |
437 |
Q |
| |
|
||||||||||||| || |||||||||| |||||||| ||||||| ||||||||||| ||| ||| ||||||| |||||||||||||| |||| ||||| |
|
|
| T |
22855281 |
tatgttttcttctttt-tgtgtctttgcttgaaattgaaagaatcaaatttccacctaactgttttcctcattcagtgtgctatgtttgaactttattat |
22855183 |
T |
|
| Q |
438 |
----------------aataatgaagtcattctttcaaagcaatatagattctctctttagatatgat-taaaaaatactatgattttatatattcacag |
520 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||| ||| |||||| |||||||| |
|
|
| T |
22855182 |
caatataatatataataataatgaagtcattctttcaaaacaatatagattctcactttagatatgataaaaaaaagactctgattt----tattcacaa |
22855087 |
T |
|
| Q |
521 |
cttctgttttctacttctttaaagtgcaagaattgggaggatgga-caaaaacgct-actcagttttgaccattcgctatcatgaataaa |
608 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| || |||||| ||| ||| |||| |||||||| ||||| | ||||||| |
|
|
| T |
22855086 |
cttctgttttccacttctttaaagtgcaagaattgggaggattgaccaaaaaagctcacttagttgtgaccattggctattaggaataaa |
22854997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 338 - 439
Target Start/End: Complemental strand, 23803491 - 23803390
Alignment:
| Q |
338 |
tatgttttcttctcttctgtgtctttgtttgaaattagaagaatcgaatttccacctcactatttgcctcatttagtgtgctatgtttcaactgtattag |
437 |
Q |
| |
|
|||||||||||||||| | | |||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23803491 |
tatgttttcttctcttttatatctttgtttgaaattagaagaatcaaatttccacatcactgtttgcctcatttagtgtgctatgtttcaactgtattag |
23803392 |
T |
|
| Q |
438 |
aa |
439 |
Q |
| |
|
|| |
|
|
| T |
23803391 |
aa |
23803390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 419 - 545
Target Start/End: Complemental strand, 23803386 - 23803264
Alignment:
| Q |
419 |
tatgtttcaactgtattagaataatgaagtcattctttcaaagcaatatagattctctctttagatatgattaaaaaatactatgattttatatattcac |
518 |
Q |
| |
|
||||||||||||||| |||| |||||||||||||||| |||||||||||||| |||||||||||||||| | |||| ||| |||||| ||||||| |
|
|
| T |
23803386 |
tatgtttcaactgtactagaggaatgaagtcattctttgaaagcaatatagatattctctttagatatgataagaaaagactctgattt----tattcac |
23803291 |
T |
|
| Q |
519 |
agcttctgttttctacttctttaaagt |
545 |
Q |
| |
|
|| |||||||||| | ||||||||||| |
|
|
| T |
23803290 |
agtttctgttttccatttctttaaagt |
23803264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 341 - 436
Target Start/End: Complemental strand, 18126930 - 18126836
Alignment:
| Q |
341 |
gttttcttctcttctgtgtctttgtttgaaattagaagaatcgaatttccacctcactatttgcctcatttagtgtgctatgtttcaactgtatta |
436 |
Q |
| |
|
|||||||||| || ||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| |||||||||||||| |||| ||||| |
|
|
| T |
18126930 |
gttttcttctttt-tgtgtctttgtttgaaattgaaagaatcaaatttccacctaactatttgcctcattcagtgtgctatgtttgaactttatta |
18126836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 438 - 571
Target Start/End: Complemental strand, 18109450 - 18109306
Alignment:
| Q |
438 |
aataatgaagtcattctttcaaagcaatatagattctctctttagatatgat---------------taaaaaatactatgattttatatattcacagct |
522 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||| |||||| ||||||||||| |
|
|
| T |
18109450 |
aataatgaagtcattctttcaaagcaatatagattctcactttagatatgataaaaaaaaaaaaaaaaaaaaaagactctgattt----tattcacagct |
18109355 |
T |
|
| Q |
523 |
tctgttttctacttctttaaagtgcaagaattgggaggatggacaaaaa |
571 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
18109354 |
tctgttttccacttctttaaagtgcaagaattgggaggattgaccaaaa |
18109306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 22960766 - 22960834
Alignment:
| Q |
6 |
caagtatcaaatgacacccccaacaagttatataggctaattctcaagggttttatgctttggatatac |
74 |
Q |
| |
|
|||||||| || ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22960766 |
caagtatcgaacgacactcccaacaagatatataggctaattctcaagggttttatgctttggatatac |
22960834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 23827626 - 23827558
Alignment:
| Q |
6 |
caagtatcaaatgacacccccaacaagttatataggctaattctcaagggttttatgctttggatatac |
74 |
Q |
| |
|
|||||||| || ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23827626 |
caagtatcgaacgacactcccaacaagatatataggctaattctcaagggttttatgctttggatatac |
23827558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 702 - 755
Target Start/End: Complemental strand, 22914596 - 22914540
Alignment:
| Q |
702 |
gtttttctaacctatgcaa---tggataggataaggtgcaataaatgtacctctttt |
755 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
22914596 |
gtttttctaacctatgcaacattgcataggataaggtgcaataaatgtacctctttt |
22914540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 22788220 - 22788160
Alignment:
| Q |
16 |
atgacacccccaacaagttatataggctaattctcaagggttttatgctttggatatacttc |
77 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
22788220 |
atgacactcccaaaaagttatataggctaatactcg-gggttttatgctttggatatacttc |
22788160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 671
Target Start/End: Complemental strand, 22914683 - 22914650
Alignment:
| Q |
638 |
ttttggatatccatggtataacccacaaatatat |
671 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
22914683 |
ttttggatatccatggtataacccacaaatatat |
22914650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 660
Target Start/End: Original strand, 22966985 - 22967030
Alignment:
| Q |
615 |
aatgtgccaaagaaaacaactgtttttggatatccatggtataacc |
660 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
22966985 |
aatgtgtcaaagaaaataactgtttttggatatccaaggtataacc |
22967030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 671
Target Start/End: Original strand, 22985228 - 22985285
Alignment:
| Q |
615 |
aatgtgccaaagaaaac-aactgtttttggatatccatggtataacccacaaatatat |
671 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||| ||||||| ||| ||||| |
|
|
| T |
22985228 |
aatgtgccaaagaaaaccaactgtttttggatatctatggcataacccccaagtatat |
22985285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 671
Target Start/End: Complemental strand, 23803166 - 23803109
Alignment:
| Q |
615 |
aatgtgccaaagaaaac-aactgtttttggatatccatggtataacccacaaatatat |
671 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||| ||||||| ||| ||||| |
|
|
| T |
23803166 |
aatgtgccaaagaaaaccaactgtttttggatatctatggcataacccccaagtatat |
23803109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 660
Target Start/End: Complemental strand, 23821408 - 23821363
Alignment:
| Q |
615 |
aatgtgccaaagaaaacaactgtttttggatatccatggtataacc |
660 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
23821408 |
aatgtgtcaaagaaaataactgtttttggatatccaaggtataacc |
23821363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 700 - 755
Target Start/End: Original strand, 22880757 - 22880815
Alignment:
| Q |
700 |
gggtttttctaacctatgcaa---tggataggataaggtgcaataaatgtacctctttt |
755 |
Q |
| |
|
||||||||||||||||||||| || |||| |||||||| |||||||||||||||||| |
|
|
| T |
22880757 |
gggtttttctaacctatgcaacattgcatagaataaggtgtaataaatgtacctctttt |
22880815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 700 - 755
Target Start/End: Original strand, 22898692 - 22898750
Alignment:
| Q |
700 |
gggtttttctaacctatgcaa---tggataggataaggtgcaataaatgtacctctttt |
755 |
Q |
| |
|
||||||||||||||||||||| || |||| |||||||| |||||||||||||||||| |
|
|
| T |
22898692 |
gggtttttctaacctatgcaacattgcatagaataaggtgtaataaatgtacctctttt |
22898750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 619 - 658
Target Start/End: Complemental strand, 22868888 - 22868849
Alignment:
| Q |
619 |
tgccaaagaaaacaactgtttttggatatccatggtataa |
658 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
22868888 |
tgccaaacaaaacaacagtttttggatatccatggtataa |
22868849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000007; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 701 - 755
Target Start/End: Original strand, 43574883 - 43574940
Alignment:
| Q |
701 |
ggtttttctaacctatgcaa---tggataggataaggtgcaataaatgtacctctttt |
755 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||||||||||| ||||| |
|
|
| T |
43574883 |
ggtttttctaacctatgcaacattgcataggataaggtgcaataaatgtaccactttt |
43574940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 700 - 749
Target Start/End: Complemental strand, 9418081 - 9418029
Alignment:
| Q |
700 |
gggtttttctaacctatgcaa---tggataggataaggtgcaataaatgtacc |
749 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||||| |||||||||| |
|
|
| T |
9418081 |
gggtttttctaacctatgcaacattgcataggataaggtgcattaaatgtacc |
9418029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 36; Significance: 0.00000000007; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 697 - 755
Target Start/End: Original strand, 9833218 - 9833279
Alignment:
| Q |
697 |
atagggtttttctaacctatgcaa---tggataggataaggtgcaataaatgtacctctttt |
755 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||| ||||| |||||||||||||||||| |
|
|
| T |
9833218 |
atagggtttttctaacctatgcaacattgcataggatgaggtggaataaatgtacctctttt |
9833279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 699 - 749
Target Start/End: Original strand, 20546806 - 20546859
Alignment:
| Q |
699 |
agggtttttctaacctatgcaa---tggataggataaggtgcaataaatgtacc |
749 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
20546806 |
agggtttttctaacctatgcaacattgcataggataaggtgcaataaatgtacc |
20546859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 724 - 755
Target Start/End: Original strand, 21370215 - 21370246
Alignment:
| Q |
724 |
ataggataaggtgcaataaatgtacctctttt |
755 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
21370215 |
ataggataaggtgcaataaatgtacctctttt |
21370246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 699 - 749
Target Start/End: Complemental strand, 38365682 - 38365629
Alignment:
| Q |
699 |
agggtttttctaacctatgcaat---ggataggataaggtgcaataaatgtacc |
749 |
Q |
| |
|
||||||||| ||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
38365682 |
agggtttttttaacctatgcaatattgtataggataaggtgcaataaatgtacc |
38365629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 700 - 746
Target Start/End: Complemental strand, 43700566 - 43700517
Alignment:
| Q |
700 |
gggtttttctaacctatgcaat---ggataggataaggtgcaataaatgt |
746 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
43700566 |
gggtttttctaacctatgcaatattgcataggataaggtgcaataaatgt |
43700517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 704 - 749
Target Start/End: Original strand, 52757481 - 52757529
Alignment:
| Q |
704 |
ttttctaacctatgcaat---ggataggataaggtgcaataaatgtacc |
749 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
52757481 |
ttttctaacctatgcaatattgcataggataaggtgcaataaatgtacc |
52757529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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