View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0126_high_3 (Length: 385)
Name: NF0126_high_3
Description: NF0126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0126_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 30 - 332
Target Start/End: Original strand, 45037637 - 45037938
Alignment:
| Q |
30 |
atctcttgattacaacaagaatttgagtggaagtggtgaagtacaaacgaatggtgttgaaattgagccattcgtacaagcattgtctgaggtaggtcgt |
129 |
Q |
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| T |
45037637 |
atctcttgattacaacaagaatttgagtggaagtggtgaagtacaaacgaatggttttgaaattgagccattcgtacaagcattgtctgaggtaggtcgt |
45037736 |
T |
|
| Q |
130 |
gttcaatatgtcacagcaccttcagcagcttaaactgagctgttttttggtgaccattcattcgtgcaatggaagcaaaaacataaaaaatgaagtaagg |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45037737 |
gttcaatatgtcacagcaccttcagcagcttaaactgagctgttttttggtgaccattcattcgtgcaatggaagcaaaaacataaaaaatgaagtaagg |
45037836 |
T |
|
| Q |
230 |
aataacgatggaaattattatggaagtgagtaaaaaagtttaggtgcaaccgttctagaannnnnnncaagaccaggggaaatggttggtgctatatttc |
329 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||| |
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| T |
45037837 |
aataacgatggaaattattatggaagtgagt-aaaaagtttaggtgcaaccgttcaagaatttttttcaagacaaggggaaatggttggtgctatatttc |
45037935 |
T |
|
| Q |
330 |
agc |
332 |
Q |
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||| |
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| T |
45037936 |
agc |
45037938 |
T |
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