View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0126_high_7 (Length: 254)

Name: NF0126_high_7
Description: NF0126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0126_high_7
NF0126_high_7
[»] scaffold0149 (2 HSPs)
scaffold0149 (14-87)||(5624-5697)
scaffold0149 (14-87)||(10055-10128)
[»] scaffold0404 (1 HSPs)
scaffold0404 (14-90)||(6706-6782)
[»] scaffold0261 (2 HSPs)
scaffold0261 (14-90)||(21789-21865)
scaffold0261 (14-90)||(13610-13686)
[»] scaffold0156 (1 HSPs)
scaffold0156 (18-90)||(36069-36141)
[»] scaffold0079 (1 HSPs)
scaffold0079 (14-90)||(2672-2748)
[»] scaffold0031 (1 HSPs)
scaffold0031 (14-90)||(109586-109662)
[»] chr8 (20 HSPs)
chr8 (14-90)||(23656918-23656994)
chr8 (18-90)||(21927418-21927490)
chr8 (18-90)||(19861426-19861498)
chr8 (18-90)||(20008639-20008711)
chr8 (14-82)||(29302140-29302208)
chr8 (21-90)||(20390090-20390159)
chr8 (21-90)||(21323999-21324068)
chr8 (14-90)||(22052854-22052930)
chr8 (14-90)||(27356527-27356603)
chr8 (14-90)||(31569556-31569632)
chr8 (18-90)||(16269942-16270014)
chr8 (18-90)||(22372922-22372994)
chr8 (18-79)||(31415187-31415248)
chr8 (18-90)||(6605649-6605721)
chr8 (14-90)||(20394847-20394923)
chr8 (15-90)||(23887015-23887090)
chr8 (24-90)||(4984033-4984099)
chr8 (24-90)||(14567133-14567199)
chr8 (18-79)||(28982913-28982974)
chr8 (18-79)||(28988132-28988193)
[»] chr7 (26 HSPs)
chr7 (18-90)||(15100865-15100937)
chr7 (18-90)||(14262506-14262578)
chr7 (18-90)||(12205062-12205134)
chr7 (18-90)||(16070557-16070629)
chr7 (18-90)||(19149126-19149198)
chr7 (14-90)||(19614590-19614666)
chr7 (18-90)||(20748525-20748597)
chr7 (18-90)||(13023272-13023344)
chr7 (18-90)||(14139594-14139666)
chr7 (14-90)||(14284634-14284710)
chr7 (14-90)||(15342346-15342422)
chr7 (14-90)||(11386687-11386763)
chr7 (18-90)||(12458555-12458627)
chr7 (14-90)||(13966926-13967002)
chr7 (15-90)||(13675367-13675442)
chr7 (18-90)||(11301475-11301547)
chr7 (18-90)||(16948734-16948806)
chr7 (18-90)||(26093060-26093132)
chr7 (18-90)||(49154216-49154288)
chr7 (14-90)||(15626439-15626515)
chr7 (18-90)||(26116852-26116924)
chr7 (20-90)||(18052217-18052287)
chr7 (20-90)||(23504134-23504204)
chr7 (15-90)||(48813533-48813607)
chr7 (14-90)||(12689416-12689492)
chr7 (14-90)||(14213588-14213664)
[»] chr2 (16 HSPs)
chr2 (18-90)||(25264610-25264682)
chr2 (18-90)||(23112292-23112364)
chr2 (18-90)||(19650865-19650937)
chr2 (14-90)||(27789296-27789372)
chr2 (18-90)||(31832214-31832286)
chr2 (18-90)||(19717832-19717904)
chr2 (14-90)||(23098829-23098905)
chr2 (14-90)||(23278332-23278408)
chr2 (14-90)||(23295491-23295567)
chr2 (18-90)||(1065307-1065379)
chr2 (14-82)||(24950154-24950222)
chr2 (15-90)||(24819042-24819117)
chr2 (21-82)||(27208990-27209051)
chr2 (20-90)||(12575909-12575979)
chr2 (14-90)||(21143852-21143928)
chr2 (14-90)||(24875561-24875637)
[»] scaffold0054 (1 HSPs)
scaffold0054 (16-90)||(64784-64858)
[»] scaffold1830 (1 HSPs)
scaffold1830 (18-90)||(950-1022)
[»] scaffold0304 (1 HSPs)
scaffold0304 (14-90)||(1759-1835)
[»] scaffold0298 (1 HSPs)
scaffold0298 (18-90)||(10335-10407)
[»] scaffold0244 (1 HSPs)
scaffold0244 (18-90)||(19308-19380)
[»] scaffold0108 (1 HSPs)
scaffold0108 (18-90)||(49060-49132)
[»] scaffold0106 (1 HSPs)
scaffold0106 (14-90)||(33290-33366)
[»] scaffold0049 (1 HSPs)
scaffold0049 (18-90)||(50153-50225)
[»] scaffold0001 (2 HSPs)
scaffold0001 (14-90)||(453487-453563)
scaffold0001 (14-90)||(515627-515703)
[»] chr6 (19 HSPs)
chr6 (18-90)||(19487692-19487764)
chr6 (14-90)||(14378332-14378408)
chr6 (14-90)||(14379882-14379958)
chr6 (14-90)||(34644002-34644078)
chr6 (18-90)||(19454813-19454885)
chr6 (20-90)||(25769633-25769703)
chr6 (18-90)||(5295626-5295698)
chr6 (14-90)||(19881087-19881163)
chr6 (20-82)||(21473398-21473460)
chr6 (14-90)||(18796479-18796555)
chr6 (18-90)||(10467269-10467341)
chr6 (18-90)||(21568411-21568483)
chr6 (14-90)||(18965711-18965787)
chr6 (22-90)||(19436791-19436859)
chr6 (21-82)||(15461133-15461194)
chr6 (18-90)||(24366201-24366273)
chr6 (18-82)||(5837639-5837703)
chr6 (14-90)||(22828771-22828847)
chr6 (14-90)||(25608277-25608353)
[»] chr4 (17 HSPs)
chr4 (18-90)||(15323142-15323214)
chr4 (18-90)||(15357395-15357467)
chr4 (18-90)||(8707836-8707908)
chr4 (18-90)||(15001640-15001711)
chr4 (18-90)||(15072284-15072356)
chr4 (18-90)||(16149636-16149708)
chr4 (18-90)||(16153782-16153854)
chr4 (14-90)||(51605063-51605139)
chr4 (18-90)||(3263069-3263141)
chr4 (24-90)||(29451818-29451884)
chr4 (14-90)||(14696038-14696114)
chr4 (21-88)||(14161397-14161464)
chr4 (21-82)||(1647555-1647616)
chr4 (21-90)||(27902311-27902380)
chr4 (27-90)||(15247849-15247910)
chr4 (18-76)||(44660141-44660199)
chr4 (41-90)||(11205529-11205578)
[»] chr3 (26 HSPs)
chr3 (18-90)||(31693688-31693760)
chr3 (18-90)||(31940457-31940529)
chr3 (14-90)||(11950407-11950483)
chr3 (14-90)||(13970619-13970695)
chr3 (14-90)||(14088227-14088303)
chr3 (18-90)||(15229157-15229229)
chr3 (18-90)||(15235025-15235097)
chr3 (14-90)||(12359026-12359102)
chr3 (14-90)||(16328159-16328235)
chr3 (18-90)||(16379431-16379503)
chr3 (18-90)||(16835013-16835085)
chr3 (14-90)||(17187928-17188004)
chr3 (18-90)||(12179892-12179964)
chr3 (14-90)||(41179076-41179152)
chr3 (18-93)||(11959672-11959747)
chr3 (18-90)||(10385225-10385297)
chr3 (18-90)||(28755872-28755944)
chr3 (18-90)||(18132849-18132921)
chr3 (89-164)||(2656934-2657009)
chr3 (20-90)||(13943578-13943648)
chr3 (14-82)||(10418544-10418612)
chr3 (18-90)||(47125498-47125570)
chr3 (15-90)||(15014267-15014342)
chr3 (24-90)||(44778801-44778867)
chr3 (14-90)||(15340813-15340889)
chr3 (14-90)||(15401027-15401103)
[»] scaffold0090 (2 HSPs)
scaffold0090 (13-90)||(20805-20882)
scaffold0090 (13-90)||(24967-25044)
[»] scaffold0751 (1 HSPs)
scaffold0751 (14-90)||(4132-4208)
[»] scaffold0730 (1 HSPs)
scaffold0730 (14-90)||(275-351)
[»] scaffold0509 (1 HSPs)
scaffold0509 (18-90)||(10784-10856)
[»] scaffold0348 (1 HSPs)
scaffold0348 (18-90)||(10167-10239)
[»] scaffold0266 (1 HSPs)
scaffold0266 (18-90)||(16068-16140)
[»] scaffold0249 (1 HSPs)
scaffold0249 (18-90)||(251-323)
[»] scaffold0234 (1 HSPs)
scaffold0234 (18-90)||(23357-23429)
[»] scaffold0192 (1 HSPs)
scaffold0192 (18-90)||(28481-28553)
[»] scaffold0180 (3 HSPs)
scaffold0180 (18-90)||(34031-34103)
scaffold0180 (14-90)||(514-590)
scaffold0180 (14-90)||(4834-4910)
[»] scaffold0026 (1 HSPs)
scaffold0026 (18-90)||(50766-50838)
[»] scaffold0016 (1 HSPs)
scaffold0016 (18-90)||(176622-176694)
[»] chr5 (22 HSPs)
chr5 (18-90)||(22234377-22234449)
chr5 (14-90)||(21679231-21679307)
chr5 (18-89)||(24618752-24618823)
chr5 (18-89)||(24714983-24715054)
chr5 (18-89)||(24748011-24748082)
chr5 (14-90)||(22504518-22504594)
chr5 (14-90)||(20344121-20344197)
chr5 (15-90)||(20466553-20466628)
chr5 (18-90)||(14885448-14885520)
chr5 (18-90)||(25849914-25849986)
chr5 (18-90)||(37541838-37541910)
chr5 (21-83)||(28893402-28893464)
chr5 (21-83)||(28914873-28914935)
chr5 (21-83)||(28922228-28922290)
chr5 (21-83)||(28930141-28930203)
chr5 (21-90)||(22463790-22463859)
chr5 (18-90)||(17267791-17267863)
chr5 (21-83)||(20777759-20777821)
chr5 (21-82)||(20823300-20823361)
chr5 (14-90)||(23473084-23473160)
chr5 (18-90)||(24796854-24796926)
chr5 (14-90)||(22349776-22349852)
[»] chr1 (18 HSPs)
chr1 (18-90)||(21743899-21743971)
chr1 (18-90)||(41308613-41308685)
chr1 (18-90)||(23196596-23196668)
chr1 (14-90)||(20938406-20938482)
chr1 (18-90)||(19661483-19661555)
chr1 (18-90)||(19856245-19856317)
chr1 (18-90)||(24097950-24098022)
chr1 (21-90)||(20855110-20855179)
chr1 (18-90)||(31538344-31538416)
chr1 (18-90)||(48424844-48424916)
chr1 (18-90)||(52987712-52987784)
chr1 (24-90)||(20296352-20296418)
chr1 (14-90)||(20834243-20834319)
chr1 (18-90)||(21952849-21952921)
chr1 (18-90)||(38911173-38911245)
chr1 (18-74)||(37679036-37679092)
chr1 (14-90)||(17043358-17043434)
chr1 (14-90)||(19108308-19108384)
[»] scaffold0865 (1 HSPs)
scaffold0865 (20-90)||(2552-2622)
[»] scaffold0133 (1 HSPs)
scaffold0133 (20-90)||(29565-29635)
[»] scaffold0585 (1 HSPs)
scaffold0585 (18-90)||(5367-5439)
[»] scaffold0476 (1 HSPs)
scaffold0476 (14-90)||(1819-1895)
[»] scaffold0367 (1 HSPs)
scaffold0367 (18-90)||(16427-16499)
[»] scaffold0309 (1 HSPs)
scaffold0309 (18-90)||(11749-11821)
[»] scaffold0239 (1 HSPs)
scaffold0239 (14-90)||(11060-11136)
[»] scaffold0213 (1 HSPs)
scaffold0213 (18-90)||(4614-4686)
[»] scaffold0104 (2 HSPs)
scaffold0104 (18-90)||(24170-24242)
scaffold0104 (21-90)||(44698-44767)
[»] scaffold0076 (2 HSPs)
scaffold0076 (14-90)||(31951-32027)
scaffold0076 (18-90)||(55178-55250)
[»] scaffold0028 (1 HSPs)
scaffold0028 (14-90)||(48788-48864)
[»] scaffold0011 (3 HSPs)
scaffold0011 (18-90)||(150525-150597)
scaffold0011 (18-90)||(193982-194054)
scaffold0011 (14-90)||(24807-24883)
[»] scaffold0523 (1 HSPs)
scaffold0523 (21-90)||(1825-1894)
[»] scaffold0117 (1 HSPs)
scaffold0117 (21-90)||(5974-6043)
[»] scaffold1646 (1 HSPs)
scaffold1646 (18-90)||(1280-1352)
[»] scaffold1477 (1 HSPs)
scaffold1477 (18-90)||(183-255)
[»] scaffold1373 (1 HSPs)
scaffold1373 (18-90)||(1112-1184)
[»] scaffold0235 (2 HSPs)
scaffold0235 (14-90)||(9731-9807)
scaffold0235 (14-90)||(19945-20021)
[»] scaffold0126 (1 HSPs)
scaffold0126 (14-82)||(42881-42949)
[»] scaffold0089 (2 HSPs)
scaffold0089 (14-90)||(550-626)
scaffold0089 (18-90)||(14991-15063)
[»] scaffold0046 (1 HSPs)
scaffold0046 (18-90)||(80109-80181)
[»] scaffold0035 (1 HSPs)
scaffold0035 (18-90)||(4705-4777)
[»] scaffold0010 (2 HSPs)
scaffold0010 (14-90)||(45674-45749)
scaffold0010 (18-90)||(40611-40683)
[»] scaffold0005 (1 HSPs)
scaffold0005 (14-90)||(262180-262256)
[»] scaffold0003 (1 HSPs)
scaffold0003 (14-90)||(195196-195272)
[»] scaffold1288 (1 HSPs)
scaffold1288 (15-90)||(1129-1204)
[»] scaffold0053 (2 HSPs)
scaffold0053 (21-90)||(47315-47384)
scaffold0053 (14-90)||(56121-56197)
[»] scaffold0139 (1 HSPs)
scaffold0139 (18-90)||(37604-37676)
[»] scaffold0130 (1 HSPs)
scaffold0130 (18-90)||(9086-9158)
[»] scaffold0124 (1 HSPs)
scaffold0124 (18-90)||(14156-14228)
[»] scaffold0114 (1 HSPs)
scaffold0114 (18-90)||(21842-21914)
[»] scaffold0067 (4 HSPs)
scaffold0067 (18-90)||(28578-28650)
scaffold0067 (14-90)||(50454-50530)
scaffold0067 (14-90)||(59488-59564)
scaffold0067 (14-90)||(65876-65952)
[»] scaffold0042 (1 HSPs)
scaffold0042 (18-90)||(22661-22733)
[»] scaffold0029 (1 HSPs)
scaffold0029 (14-90)||(114515-114591)
[»] scaffold0004 (2 HSPs)
scaffold0004 (18-90)||(201746-201818)
scaffold0004 (14-90)||(324660-324736)
[»] scaffold0682 (1 HSPs)
scaffold0682 (21-90)||(1839-1908)
[»] scaffold0190 (1 HSPs)
scaffold0190 (18-90)||(31597-31669)
[»] scaffold0088 (1 HSPs)
scaffold0088 (18-90)||(28889-28961)
[»] scaffold0074 (1 HSPs)
scaffold0074 (14-90)||(5068-5144)
[»] scaffold0072 (1 HSPs)
scaffold0072 (14-90)||(53001-53077)
[»] scaffold0060 (1 HSPs)
scaffold0060 (18-90)||(44739-44811)
[»] scaffold0034 (2 HSPs)
scaffold0034 (14-90)||(3227-3303)
scaffold0034 (21-82)||(69334-69395)
[»] scaffold0020 (1 HSPs)
scaffold0020 (14-90)||(99836-99912)
[»] scaffold0009 (1 HSPs)
scaffold0009 (18-90)||(250576-250648)
[»] scaffold0708 (1 HSPs)
scaffold0708 (18-76)||(6423-6481)
[»] scaffold0102 (1 HSPs)
scaffold0102 (18-88)||(41655-41725)
[»] scaffold0062 (1 HSPs)
scaffold0062 (18-76)||(9061-9119)
[»] scaffold0007 (1 HSPs)
scaffold0007 (21-90)||(268564-268633)
[»] scaffold2111 (1 HSPs)
scaffold2111 (14-90)||(861-937)
[»] scaffold0420 (1 HSPs)
scaffold0420 (18-90)||(602-673)
[»] scaffold0222 (1 HSPs)
scaffold0222 (14-90)||(9017-9093)
[»] scaffold0203 (1 HSPs)
scaffold0203 (14-82)||(12573-12641)
[»] scaffold0018 (3 HSPs)
scaffold0018 (14-90)||(24572-24648)
scaffold0018 (15-90)||(11016-11091)
scaffold0018 (15-90)||(17208-17283)
[»] scaffold0206 (1 HSPs)
scaffold0206 (21-82)||(25077-25138)
[»] scaffold1715 (1 HSPs)
scaffold1715 (24-76)||(922-974)
[»] scaffold0100 (1 HSPs)
scaffold0100 (14-90)||(22459-22535)
[»] scaffold0445 (1 HSPs)
scaffold0445 (15-90)||(2124-2199)
[»] scaffold0331 (1 HSPs)
scaffold0331 (15-78)||(16252-16315)
[»] scaffold0083 (1 HSPs)
scaffold0083 (15-90)||(9309-9384)
[»] scaffold0058 (1 HSPs)
scaffold0058 (21-90)||(21076-21145)
[»] scaffold1602 (1 HSPs)
scaffold1602 (14-90)||(341-417)
[»] scaffold0431 (1 HSPs)
scaffold0431 (14-90)||(9322-9398)
[»] scaffold0379 (1 HSPs)
scaffold0379 (14-90)||(6163-6239)
[»] scaffold0293 (1 HSPs)
scaffold0293 (14-90)||(14424-14500)
[»] scaffold0093 (1 HSPs)
scaffold0093 (18-90)||(35706-35778)
[»] scaffold0080 (1 HSPs)
scaffold0080 (14-90)||(11513-11589)


Alignment Details
Target: scaffold0149 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 5624 - 5697
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatatta 87  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  5624 agagaagaagttgtatgccaagttgtcaaaatgtgagttctggttaagtgaagtaagttttcttggccacatta 5697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 10055 - 10128
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatatta 87  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  10055 agagaagaagttgtatgccaagttgtcaaaatgtgagttctggttaagtgaagtaagttttcttggccacatta 10128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 6782 - 6706
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||    
T  6782 agagaagaagttgtatgccaagttgtcaaaatgtgagttctggttaagtgaagtgagttttcttggccacattattt 6706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 21789 - 21865
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  21789 agagaagaagttgtatgcgaagttgtcaaaatgtgagttctggttaagtgaagtaagttttcttggccacattattt 21865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 13610 - 13686
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  13610 agagaagaagttgtatgcaaaattgtcaaaatgtgagttctggttaagtgaagtaagttttcttggccacattattt 13686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 36141 - 36069
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  36141 aagaagttgtatgccaagttgtcaaagtgtgagttctggttaagtgaagtaagttttcttggccatattattt 36069  T

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Target: scaffold0079 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 2748 - 2672
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||    
T  2748 agagaagaagttgtatgccaagttgtctaaatgtgagttctggttaagtgaagtaagttttcttggccacattattt 2672  T

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Target: scaffold0031 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 109662 - 109586
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  109662 agagaagaagttgtatgccaaattgtcaaaatgcgagttctggttaagtgaagtaagttttcttggccatattattt 109586  T

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Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 23656994 - 23656918
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||    
T  23656994 agagaagaagttgtatgccaagttgtcaaagtgtgagttatggttaagtgaagtaagttttcttggccatattattt 23656918  T

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Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 21927490 - 21927418
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||    
T  21927490 aagaagttgtatgccaagttgtcaaaatgtgaattctggttaagtgaagtaagatttcttggccatattattt 21927418  T

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Target: chr8; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 19861498 - 19861426
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||| |||||||| ||  ||||||||||||||||||||||||||||||||||||    
T  19861498 aagaagttgtatgccaagttgtccaaatgtgaattttggttaagtgaagtaagttttcttggccatattattt 19861426  T

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Target: chr8; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 20008639 - 20008711
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||| |||||||| ||  ||||||||||||||||||||||||||||||||||||    
T  20008639 aagaagttgtatgccaagttgtccaaatgtgaattttggttaagtgaagtaagttttcttggccatattattt 20008711  T

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Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 29302140 - 29302208
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcca 82  Q
    ||||| |||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||    
T  29302140 agagaggaagttgtatgccaagttgtcaaaatgtgaattctggttgagtgaagtaagttttcttggcca 29302208  T

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Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 20390159 - 20390090
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||| |||| ||| |||  ||||||||||| |||||||||||||||||||||||    
T  20390159 aagttgtatgccaagttgtccaaatttgaattctagttaagtgaagcaagttttcttggccatattattt 20390090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 21323999 - 21324068
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||| |||||||| || ||||||||| ||||||||||||| |||||||||||||| |||||||    
T  21323999 aagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttttcttggccacattattt 21324068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 22052930 - 22052854
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||||||  |||||||| ||| ||||||||||||| |||||||||||||| |||||||    
T  22052930 agagaaaaagttgtatgctaagttgttgaaatgtgaattctggttaagtgaagtgagttttcttggccacattattt 22052854  T

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Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 27356603 - 27356527
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||| ||||||||| |||||||| |||||||||||| ||||||||||||| || ||||| || ||||||||||    
T  27356603 agagaagaggttgtatgcgaagttgtcgaaatgtgagttctggttaagtgaagtgagctttctgggtcatattattt 27356527  T

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Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 31569556 - 31569632
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||| ||||| |||||||||||  || |||||||||| ||||| ||||| ||||||||||    
T  31569556 agagaagaagttgtatgccaaattgtcgaaatgtgagttttggctaagtgaagtgagtttccttggtcatattattt 31569632  T

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Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 16269942 - 16270014
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||||||| || ||||| || || |||||||    
T  16269942 aagaggttgtatgcaaagttgtcaaaatgtgagttctggttaagtgaagtgagctttctgggtcacattattt 16270014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 22372994 - 22372922
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||| ||| |||||||| ||  ||||| ||||||||||||||||||| || |||||||    
T  22372994 aagaagttgtatgccaagtggtccaaatgtgaattatggttacgtgaagtaagttttcttggtcacattattt 22372922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 31415187 - 31415248
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttgg 79  Q
    |||||||||||||| ||||||||||| ||| ||||| ||||||||||||| | |||||||||    
T  31415187 aagaagttgtatgctaagttgtcaaagtgtaagttctggttaagtgaagtgaattttcttgg 31415248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 6605721 - 6605649
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||| ||||||||||||||| ||||||||||||| || ||||| || || |||||||    
T  6605721 aagaggttgtatgctaagttatcaaaatgtgagttctggttaagtgaagtgagctttctgggtcacattattt 6605649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 20394847 - 20394923
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||| ||||||||||||||||| ||||| ||| |||| | | | || ||||||||||||||||||||||    
T  20394847 agagaaaaagttatatgccaagttgtcaaagtgtgaattctggttgaataaggtgagttttcttggccatattattt 20394923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 23887090 - 23887015
Alignment:
Q  15 gagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||| ||||||||||||||||| ||||| |||  ||| | ||| || ||||||||||||||| ||||||    
T  23887090 gagaagaagttatatgccaagttgtcaaagtgtgaattctagttgaatgaggtgagttttcttggccatgttattt 23887015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 4984099 - 4984033
Alignment:
Q  24 ttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||  ||||||||||||||||||||| ||||||||||||| || ||||| || || |||||||    
T  4984099 ttgtatgttaagttgtcaaaatgtgagttctggttaagtgaagtgagctttctgggtcacattattt 4984033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 14567199 - 14567133
Alignment:
Q  24 ttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||| |||||||| |||||||||||| ||||||||||||| || ||||| || || |||||||    
T  14567199 ttgtatgcaaagttgtcgaaatgtgagttctggttaagtgaagtgagctttctgggtcacattattt 14567133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 28982974 - 28982913
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttgg 79  Q
    |||| ||||||||| ||||| ||| ||||||| ||| ||||| |||||||||||||||||||    
T  28982974 aagaggttgtatgctaagttatcacaatgtgaattctggttacgtgaagtaagttttcttgg 28982913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 28988193 - 28988132
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttgg 79  Q
    |||| ||||||||| ||||| ||| ||||||| ||| ||||| |||||||||||||||||||    
T  28988193 aagaggttgtatgctaagttatcacaatgtgaattctggttacgtgaagtaagttttcttgg 28988132  T

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Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 15100865 - 15100937
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  15100865 aagaagttgtatgccaagttgtcaaaatgtgagttctggttaagtgaagtaagttttcttggccacattattt 15100937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 14262506 - 14262578
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||    
T  14262506 aagaagttgtatgccaagttgtcaaaatgtgaattttggttaagtgaagtaagttttcttggccatattattt 14262578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 12205062 - 12205134
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  12205062 aagaagttgtatgccaagttgtccaaatgtgaattctggttaagtgaagtaagttttcttggccacattattt 12205134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 16070557 - 16070629
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| || ||||||||||    
T  16070557 aagaagttgtatgccaagttgtccaaatgtgagttctggttaagtgaagtaagttttctgggtcatattattt 16070629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 19149198 - 19149126
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||| || ||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  19149198 aagaagttgtgtgtcaagttgtccaaatgtgaattctggttaagtgaagtaagttttcttggccatattattt 19149126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 19614666 - 19614590
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||| |||||||| || |||||  ||||||||||||| ||||||||||||||||||||||    
T  19614666 agagaagaagttgtatgccaaattgtcaaagtgcgagttttggttaagtgaagtgagttttcttggccatattattt 19614590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 20748597 - 20748525
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||| || ||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  20748597 aagaagttgtgtgtcaagttgtccaaatgtgaattctggttaagtgaagtaagttttcttggccatattattt 20748525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 13023344 - 13023272
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||| || || |||||||    
T  13023344 aagaagttgtatgccaagttgtcaaaatgtgagttgtggttaagtgaagtgagttttctgggtcacattattt 13023272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 14139666 - 14139594
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||| |||||||||||||||||  || |||||||||||||||| ||||| ||||||||||    
T  14139666 aagaagttgtatgccaaattgtcaaaatgtgagttttggctaagtgaagtaagtttccttggtcatattattt 14139594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 14284634 - 14284710
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||| ||||||| |||||||| ||||||||||||  |||||||||||| |||||||||||||| |||||||    
T  14284634 agagaagaagctgtatgctaagttgtcgaaatgtgagttctagttaagtgaagtgagttttcttggccacattattt 14284710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 15342422 - 15342346
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||||||| |||||||| ||| ||||||||||||| |||||||||||||| |||||||    
T  15342422 agagaaaaagttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagtgagttttcttggccacattattt 15342346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 11386687 - 11386763
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||||||| |||||||| ||| ||||||||||||| |||||||| ||||| |||||||    
T  11386687 agagaaaaagttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagtgagttttctcggccacattattt 11386763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 12458627 - 12458555
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||| || ||||| || || |||||||    
T  12458627 aagaagttgtatgcaaagttgtcaaaatgtgagttctggttaagtgaagtgagatttctgggacacattattt 12458555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 13966926 - 13967002
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| || ||||| || || |||||||    
T  13966926 agagaagaggttgtatgctaagttgtcaaaatgtgagttctggttaagtgaagtgagctttctgggtcacattattt 13967002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 13675442 - 13675367
Alignment:
Q  15 gagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||| ||||||||||| |||||||| || ||||||||| ||||||||||||| |||| ||||||||| |||||||    
T  13675442 gagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttatcttggccacattattt 13675367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 11301475 - 11301547
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| |||||||||||||||||| || |||||| ||||||||||||||| || || |||||||    
T  11301475 aagaggttgtatgctaagttgtcaaaatgtgagatctggttaaatgaagtaagttttctgggtcacattattt 11301547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 16948734 - 16948806
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| ||| ||||||| ||||||||  ||||||||||||| |||||||| ||||| |||||||    
T  16948734 aagaagttgtatgctaagctgtcaaagtgtgagttttggttaagtgaagtgagttttctgggccacattattt 16948806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 26093060 - 26093132
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||| || || |||||||    
T  26093060 aagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagttttctgggtcacattattt 26093132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 49154288 - 49154216
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||| || || |||||||    
T  49154288 aagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagttttctgggtcacattattt 49154216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 15626515 - 15626439
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||| ||||| ||||||||||| ||||| ||| |||| | ||| || ||||| ||||||||||||||||    
T  15626515 agagaagaagttatatgctaagttgtcaaagtgtgaattctggttgaatgaggtgagtttccttggccatattattt 15626439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 26116852 - 26116924
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| |||||||| |||||||||||| ||||||||||||| || ||||| || || |||||||    
T  26116852 aagaggttgtatgcaaagttgtcgaaatgtgagttctggttaagtgaagtgagctttctgggtcacattattt 26116924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 18052217 - 18052287
Alignment:
Q  20 gaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||  |||| |||||||||||  || |||||||||| ||||| ||||| ||||||||||    
T  18052217 gaagttgtatgccaaactgtcgaaatgtgagttttggctaagtgaagtgagtttccttggtcatattattt 18052287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 23504134 - 23504204
Alignment:
Q  20 gaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||  |||| |||||||||||  || |||||||||| ||||| ||||| ||||||||||    
T  23504134 gaagttgtatgccaaactgtcgaaatgtgagttttggctaagtgaagtgagtttccttggtcatattattt 23504204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 48813533 - 48813607
Alignment:
Q  15 gagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||| |||||||| |||||||| ||||| ||| |||| | ||| || ||||||||||||||| ||||||    
T  48813533 gagaagaagttatatgccaa-ttgtcaaagtgtgaattctggttgaatgaggtgagttttcttggccatgttattt 48813607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 12689492 - 12689416
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||  | |||||||| ||||| || ||||||||| |||| |  ||||| ||||||||||||||| ||||||    
T  12689492 agagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttattt 12689416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 14213664 - 14213588
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||  | ||||| || |||||||| ||||| ||| |||| |  ||||||||||||||||||||| ||||||    
T  14213664 agagaagaaactttatgctaaattgtcaaagtgtgaattctggttgaaagaagtaagttttcttggccatgttattt 14213588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 25264682 - 25264610
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  25264682 aagaagttgtatgccaagttgtcaaaatgtgagttctggttaagtgaagtaagttttcttggccacattattt 25264610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 23112364 - 23112292
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  23112364 aagaagttgtatgccaagttgtccaaatgtgaattctggttaagtgaagtaagttttcttggccatattattt 23112292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 19650865 - 19650937
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||    
T  19650865 aagaagttgtatgctaagttgtcaaaatgtgagttctagttaagtgaagtaagttttcttggccacattattt 19650937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 27789372 - 27789296
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||| ||||| |||||||||||  || |||||||||| ||||| ||||| ||||||||||    
T  27789372 agagaagaagttgtatgccaaattgtcgaaatgtgagttttggctaagtgaagtgagtttccttggtcatattattt 27789296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 31832286 - 31832214
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| |||||||| |||||||||||| |||||||||||||||||||||| || || |||||||    
T  31832286 aagaggttgtatgcaaagttgtcgaaatgtgagttctggttaagtgaagtaagttttctgggtcacattattt 31832214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 19717832 - 19717904
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||| |||||||| || ||||||||| |||||||||||||||| ||||| ||||| |||||||    
T  19717832 aagaagctgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtaagatttctaggccacattattt 19717904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 23098829 - 23098905
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| | ||||||||| |||||||| |||||||| ||| ||||||||||||| |||||||| ||||| |||||||    
T  23098829 agagaaaatgttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagtgagttttctcggccacattattt 23098905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 23278408 - 23278332
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||||||| || || |||||| ||||||||||||| |||||||| ||||| |||||||    
T  23278408 agagaaaaagttgtatgctaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccacattattt 23278332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 23295567 - 23295491
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||||||| || ||||||||| |||||| |||||| |||||||| ||||| |||||||    
T  23295567 agagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaattgaagtgagttttctgggccacattattt 23295491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 1065379 - 1065307
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||| ||||||||||||||| | |||| ||||||||||||||| || || |||||||    
T  1065379 aagaggttgtatgctaagttatcaaaatgtgagttctgattaaatgaagtaagttttctgggtcacattattt 1065307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 24950222 - 24950154
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcca 82  Q
    |||||| ||||||||||| |||||||| || ||||||||  ||||||||||||| ||| ||||||||||    
T  24950222 agagaaaaagttgtatgctaagttgtcgaagtgtgagttatggttaagtgaagtgagtcttcttggcca 24950154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 24819042 - 24819117
Alignment:
Q  15 gagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||| | ||||| ||||||||||| |||||  || |||| | |||||||||||||||||||||| ||||||    
T  24819042 gagaagaagctttatgctaagttgtcaaagtgtgaactctggttgaatgaagtaagttttcttggccatgttattt 24819117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 27208990 - 27209051
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcca 82  Q
    |||||||||||||| ||||| || || |||||| ||||||||||||| |||||||| |||||    
T  27208990 aagttgtatgccaacttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggcca 27209051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 12575979 - 12575909
Alignment:
Q  20 gaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||  |||| |||||||| ||  || |||||||||| ||||| ||||| ||||||||||    
T  12575979 gaagttgtatgccaaactgtcgaaatgtgaattttggctaagtgaagtgagtttccttggtcatattattt 12575909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 21143852 - 21143928
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||  | |||||||| ||||| || ||||||||| |||| |  ||||| ||||||||||||||| ||||||    
T  21143852 agagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttattt 21143928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 24875561 - 24875637
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||  | |||||||| ||||| || ||||||||| |||| |  ||||| ||||||||||||||| ||||||    
T  24875561 agagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttattt 24875637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 64784 - 64858
Alignment:
Q  16 agaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  64784 agaagaagttgtatgccaagttgtcaaaatgtgaattctggttaagtgaagtaagttttcttggccacattattt 64858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1830 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold1830
Description:

Target: scaffold1830; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 1022 - 950
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||    
T  1022 aagaagttgtatgccaagttgtcaaaatgtgagttctagttaaatgaagtaagttttcttggccatattattt 950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 1759 - 1835
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||| |||||||    
T  1759 agagaagaagttgtatgccaagttgtcaaaatgtgagttctggttaaatgaagttagttttcttggccacattattt 1835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 10335 - 10407
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  10335 aagaagttgtatgtcaagttgtcaaagtgtgagttctggttaagtgaagtaagttttcttggccatattattt 10407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 19380 - 19308
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  19380 aagaagttgtatgccaagttgtcaaaatgtgaattctggttaagtgaagtaagttttcttggccacattattt 19308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 49132 - 49060
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||    
T  49132 aagaagttgtatgccaagttgtcaaaatgtgagttctggttaagtcaagtaagttttcttggccatatcattt 49060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 33366 - 33290
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||| |||||||    
T  33366 agagaagaagttgtatgccaagttgttaaaatgtgagttctagttaagtgaagtaagttttcttggccacattattt 33290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 50153 - 50225
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||    
T  50153 aagaagttgtatgccaagttgtcaaaatgtgaattcttgttaagtgaagtaagttttcttggccatattattt 50225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 453487 - 453563
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||    
T  453487 agagaagaagttgtatgtcaagttgtcaaaatgtgagttctggttaagtgaagtaagatttcttggccacattattt 453563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 515627 - 515703
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| |||||||| || || |||||||    
T  515627 agagaagaggttgtatgcaaagttgtcaaaatgtgagttctggttaagtgaagtgagttttctgggtcacattattt 515703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 19487692 - 19487764
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  19487692 aagaagttgtatgccaagttgtccaaatgtgaattctggttaagtgaagtaagttttcttggccatattattt 19487764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 14378332 - 14378408
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| |||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||| |||||||    
T  14378332 agagaaaaagttgtatgccaagttgtcgaaatgtgagttttggttaagtgaagtaagttttcttggccacattattt 14378408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 14379882 - 14379958
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| |||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||| |||||||    
T  14379882 agagaaaaagttgtatgccaagttgtcgaaatgtgagttttggttaagtgaagtaagttttcttggccacattattt 14379958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 34644002 - 34644078
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||| ||||| || ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  34644002 agagaagaagttgtatgccaaattgtcgaagtgtgagttctggttaagtgaagtaagtttccttggccatattattt 34644078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 19454885 - 19454813
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||    
T  19454885 aagaagttgtatgctaagttgtcaaagtgtgagttctggttaagtgaagtgagttttcttggccacattattt 19454813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 25769703 - 25769633
Alignment:
Q  20 gaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||| |||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  25769703 gaagttgtatgctaagttgtccaaatgtgaattctggttaagtgaagtaagttttcttggccacattattt 25769633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 5295626 - 5295698
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| |||||||||||||||||| ||||| | |||| |||||||||||||||||||||||||||| |||||||    
T  5295626 aagaggttgtatgccaagttgtccaaatgcgtgttctggttaagtgaagtaagttttcttggccacattattt 5295698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 19881163 - 19881087
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||  |||||||||| |||||||| || |||||| ||||||||||||| ||||||||||||||||||||||    
T  19881163 agagaagaaactgtatgccaaattgtcaaagtgcgagttctggttaagtgaagtgagttttcttggccatattattt 19881087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 21473460 - 21473398
Alignment:
Q  20 gaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcca 82  Q
    ||||||||||| ||||||||| |||||||| ||| ||||||||||||||||||||||||||||    
T  21473460 gaagttgtatgtcaagttgtccaaatgtgaattctggttaagtgaagtaagttttcttggcca 21473398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 18796555 - 18796479
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||| ||||| || ||||||||| |||||| |||||| ||||||| |||||| |||||||    
T  18796555 agagaagaagttgtatgccaaattgtcgaagtgtgagttctggttaaatgaagtgagttttcatggccacattattt 18796479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 10467269 - 10467341
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||| ||||| |||||||| || || |||||||    
T  10467269 aagaggttgtatgcaaagttgtcaaaatgtgagttctggttaagcgaagtgagttttctgggtcacattattt 10467341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 21568411 - 21568483
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| |||||||| |||||||| ||| || ||| ||||||||||||||| ||||| |||||||    
T  21568411 aagaagttgtatgctaagttgtcgaaatgtgaattctggctaattgaagtaagttttctcggccacattattt 21568483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 18965711 - 18965787
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||| ||||| ||||||||||| ||||| ||| |||| | ||| || ||||| ||||||||||||||||    
T  18965711 agagaagaagttatatgctaagttgtcaaagtgtgaattctggttgaatgaggtgagtttccttggccatattattt 18965787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 19436859 - 19436791
Alignment:
Q  22 agttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||| |||||||| || ||||||||| | ||||||||||| |||||||| ||||| |||||||    
T  19436859 agttgtatgctaagttgtcgaagtgtgagttctgcttaagtgaagtgagttttctgggccacattattt 19436791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 15461194 - 15461133
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcca 82  Q
    |||||||||||||||||||| || || || ||| ||||||||||||| |||||||| |||||    
T  15461194 aagttgtatgccaagttgtcgaagtgcgatttctggttaagtgaagtgagttttctaggcca 15461133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 24366273 - 24366201
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| |||||||| || ||||||||| ||||||||||||| || ||||| || || |||||||    
T  24366273 aagaggttgtatgcaaagttgtcgaagtgtgagttctggttaagtgaagtgagctttctgggtcacattattt 24366201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 5837639 - 5837703
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcca 82  Q
    |||||| | |||||||||||||| || ||||||||| |||| |  || |||||||||||||||||    
T  5837639 aagaagctttatgccaagttgtctaagtgtgagttctggttgaaagaggtaagttttcttggcca 5837703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 22828771 - 22828847
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||  | |||||||| ||||| || ||||||||| |||| |  ||||| ||||||||||||||| ||||||    
T  22828771 agagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttattt 22828847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 25608277 - 25608353
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||| | ||||| || |||||||| ||||| ||| |||| |  || |||||||||||||||||| ||||||    
T  25608277 agagaagaagctttatgctaaattgtcaaagtgtgaattctggttgaaagaggtaagttttcttggccatgttattt 25608353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 15323214 - 15323142
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  15323214 aagaagttgtatgccaagttgtccaaatgtgaattctggttaagtgaagtaagttttcttggccatattattt 15323142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 15357395 - 15357467
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  15357395 aagaagttgtatgccaagttgtcgaaatgtgagttctggttaagtgaattaagttttcttggccacattattt 15357467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 8707908 - 8707836
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| |||||||||||||||| |||||||| ||  |||||||||||||||||||| |||||||||||||||    
T  8707908 aagaagatgtatgccaagttgtccaaatgtgaattttggttaagtgaagtaagttttattggccatattattt 8707836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 15001640 - 15001711
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||  |||||||||| | |||||||||||||||||||||||||||| |||||||    
T  15001640 aagaagttgtatgccaagttgtttaaatgtgagt-ctggttaagtgaagtaagttttcttggccacattattt 15001711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 15072356 - 15072284
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| |||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| || |||||||    
T  15072356 aagaggttgtatgccaagttgtccaaatgtgaattctggttaagtgaagtaagttttcttggtcacattattt 15072284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 16149708 - 16149636
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| ||||| || || ||||||||| ||||||||||||||||||||||| |||| |||||||    
T  16149708 aagaagttgtatgctaagttatcgaagtgtgagttctggttaagtgaagtaagttttctttgccacattattt 16149636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 16153854 - 16153782
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| ||||| || || ||||||||| ||||||||||||||||||||||| |||| |||||||    
T  16153854 aagaagttgtatgctaagttatcgaagtgtgagttctggttaagtgaagtaagttttcttagccacattattt 16153782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 51605063 - 51605139
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||| ||||| |||||||||||  || |||||||||| ||||| ||||| ||||||||||    
T  51605063 agagaagaagttgtatgccaaattgtcgaaatgtgagttttggctaagtgaagtgagtttccttggtcatattattt 51605139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 3263069 - 3263141
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||| || || |||||||    
T  3263069 aagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagttttctgggtcacattattt 3263141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 29451818 - 29451884
Alignment:
Q  24 ttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||| |||||||| |||||||||||| ||||||||||||| || ||||| || ||||||||||    
T  29451818 ttgtatgcaaagttgtcgaaatgtgagttctggttaagtgaagtgagctttctgggtcatattattt 29451884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 14696114 - 14696038
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||| || ||||| ||||||||||| ||||||||| |||| | ||| || ||||||||||||||| ||||||    
T  14696114 agagaagaatttatatgctaagttgtcaaagtgtgagttctggttgaatgaggtgagttttcttggccatgttattt 14696038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 14161464 - 14161397
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattat 88  Q
    |||||||||||||||||||| |||||||| ||| |||| | ||| || |||||||||||||| |||||    
T  14161464 aagttgtatgccaagttgtcgaaatgtgaattctggttgaatgaggtgagttttcttggccacattat 14161397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 1647555 - 1647616
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcca 82  Q
    ||||||||||| |||||||| || || |||||| ||||||||||||| |||||| |||||||    
T  1647555 aagttgtatgctaagttgtcgaagtgcgagttctggttaagtgaagtgagttttgttggcca 1647616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 27902380 - 27902311
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||| || || ||||||  ||||| |||||| |||||||| ||||| |||||||    
T  27902380 aagttgtatgccaagttgtcgaagtgcgagttctagttaaatgaagtgagttttctaggccacattattt 27902311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 15247910 - 15247849
Alignment:
Q  27 tatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||| |||||||||  |||||||| ||||||| ||||||||||| |||||||| |||||||    
T  15247910 tatgccaggttgtcaaa--gtgagttctggttaagagaagtaagtttccttggccacattattt 15247849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 44660141 - 44660199
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttct 76  Q
    |||| ||||||||| |||||||| |||||||||||| || |||||||||| || |||||    
T  44660141 aagaggttgtatgcaaagttgtcgaaatgtgagttctggctaagtgaagtgagctttct 44660199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 11205529 - 11205578
Alignment:
Q  41 aaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||| |||||||||||||||| ||||| || || |||||||    
T  11205529 aaaatgtgagttctggttaagtgaagtaagctttctgggtcacattattt 11205578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 31693688 - 31693760
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  31693688 aagaagttgtatgctaagttgtcaaaatgtgagttctggttaagtgaagtaagttttcttggccacattattt 31693760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 31940529 - 31940457
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  31940529 aagaagttgtatgctaagttgtcaaaatgtgagttctggttaagtgaagtaagttttcttggccacattattt 31940457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 11950407 - 11950483
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||| |||||||| || ||||||||| ||||||||||||| |||||||||||||| |||||||    
T  11950407 agagaagaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttttcttggccacattattt 11950483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 13970619 - 13970695
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||| |||||||| || |||||  ||||||||||||| ||||||||||||||||||||||    
T  13970619 agagaagaagttgtatgccaaattgtcaaagtgcgagttttggttaagtgaagtgagttttcttggccatattattt 13970695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 14088303 - 14088227
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||| |||||||| || |||||  ||||||||||||| ||||||||||||||||||||||    
T  14088303 agagaagaagttgtatgccaaattgtcaaagtgcgagttttggttaagtgaagtgagttttcttggccatattattt 14088227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 15229229 - 15229157
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||| |||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  15229229 aagaagttgtatgccatgttgtccaaatgtgaattcgggttaagtgaagtaagttttcttggccacattattt 15229157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 15235097 - 15235025
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||| |||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  15235097 aagaagttgtatgccatgttgtccaaatgtgaattcgggttaagtgaagtaagttttcttggccacattattt 15235025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 12359026 - 12359102
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||||||| || ||||||||| ||||||||||||| |||||||||||||| |||||||    
T  12359026 agagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttttcttggccacattattt 12359102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 16328159 - 16328235
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||| ||||||||| ||||||||||||||||||||  ||||||||||||| |||||||| || ||||||||||    
T  16328159 agagaagaggttgtatgcaaagttgtcaaaatgtgagttatggttaagtgaagtgagttttctgggtcatattattt 16328235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 16379431 - 16379503
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||| |||||||||||||||||  || |||||||||||||||| ||||| ||||||||||    
T  16379431 aagaagttgtatgccaaattgtcaaaatgtgagttttggctaagtgaagtaagtttccttggtcatattattt 16379503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 16835013 - 16835085
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||| |||||||||||||||||  || |||||||||| ||||| ||||||||||||||||    
T  16835013 aagaagttgtatgccaaattgtcaaaatgtgagttttggctaagtgaagtgagtttccttggccatattattt 16835085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 17188004 - 17187928
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| |||||||||||||| ||||| || ||||||||| ||||||||||||| |||||||||||||| |||||||    
T  17188004 agagaaaaagttgtatgccaaattgtcgaagtgtgagttctggttaagtgaagtgagttttcttggccacattattt 17187928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 12179964 - 12179892
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| |||||||| || ||||||||| |||||| |||||| |||||||||||||| |||||||    
T  12179964 aagaagttgtatgctaagttgtcgaagtgtgagttctggttaattgaagtgagttttcttggccacattattt 12179892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 41179152 - 41179076
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||| ||||| |||||||||||  || |||||||||| ||||| ||||| ||||||||||    
T  41179152 agagaagaagttgtatgccaaattgtcgaaatgtgagttttggctaagtgaagtgagtttccttggtcatattattt 41179076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 11959672 - 11959747
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattatttgtg 93  Q
    |||| ||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| || || ||||||||||    
T  11959672 aagaggttgtatgcaaagttgtcaaaatgtgaattctggttaagtgaagtgagttttctgggtcacattatttgtg 11959747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 10385297 - 10385225
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||||||| || ||||| || || |||||||    
T  10385297 aagaggttgtatgctaagttgtcaaaatgtgagttctggttaagtgaagtgagctttctgggtcacattattt 10385225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 28755944 - 28755872
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||| || || |||||||    
T  28755944 aagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagttttctgggtcacattattt 28755872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 18132849 - 18132921
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| |||||||| || || |||||| | ||||||||||| | |||||||||||| |||||||    
T  18132849 aagaagttgtatgctaagttgtcgaagtgcgagttctgattaagtgaagtgacttttcttggccacattattt 18132921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 164
Target Start/End: Complemental strand, 2657009 - 2656934
Alignment:
Q  89 ttgtgtatagggtaaagagtaccttttgtgtccctatacatgttgatggttttcattttcttagatgaaatcactc 164  Q
    ||||||| | |||||||||| | || |||| || |||| || ||||||| ||||||||||||||||||||||||||    
T  2657009 ttgtgtacaaggtaaagagttcgttctgtgcccatataaatattgatggctttcattttcttagatgaaatcactc 2656934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 13943648 - 13943578
Alignment:
Q  20 gaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||  |||| |||||||||||  || |||||||||| ||||| ||||| ||||||||||    
T  13943648 gaagttgtatgccaaactgtcgaaatgtgagttttggctaagtgaagtgagtttccttggtcatattattt 13943578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 10418544 - 10418612
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcca 82  Q
    ||||| |||||||||||||||| |||| || || |||||| |||||| |||||| |||||||| |||||    
T  10418544 agagaggaagttgtatgccaagctgtcgaagtgcgagttctggttaaatgaagtgagttttctaggcca 10418612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 47125570 - 47125498
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||| ||||||||||| ||| |||||  ||||||||||||||| || || |||||||    
T  47125570 aagaggttgtatgctaagttatcaaaatgtgaattctggttacatgaagtaagttttctgggtcacattattt 47125498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 15014267 - 15014342
Alignment:
Q  15 gagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||| ||||||||||| || || || || ||| |||| |  ||||| ||||||||||||||||||||||    
T  15014267 gagaagaagttatatgccaagttatcgaagtgcgaattctggttgaacgaagtgagttttcttggccatattattt 15014342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 44778867 - 44778801
Alignment:
Q  24 ttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||  |||| |||||||||||  || |||||||||| ||||| ||||| ||||||||||    
T  44778867 ttgtatgccaaactgtcgaaatgtgagttttggctaagtgaagtgagtttccttggtcatattattt 44778801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 15340889 - 15340813
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||  | |||||||| ||||| || ||||||||| |||| |  ||||| ||||||||||||||| ||||||    
T  15340889 agagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttattt 15340813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 15401027 - 15401103
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||  | |||||||| ||||| || ||||||||| |||| |  ||||| ||||||||||||||| ||||||    
T  15401027 agagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttattt 15401103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 20882 - 20805
Alignment:
Q  13 tagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||| ||||| || ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  20882 tagagaagaagttgtatgccaaattgtcgaagtgtgagttctggttaagtgaagtgagttttcttggccatattattt 20805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 25044 - 24967
Alignment:
Q  13 tagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||| ||||| || ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  25044 tagagaagaagttgtatgccaaattgtcgaagtgtgagttctggttaagtgaagtgagttttcttggccatattattt 24967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 4208 - 4132
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||| ||||    
T  4208 agagaagaagttgtatgccaagttgtcaaaatgtgaattttggttaagtgaagtaagttttctgggccatatcattt 4132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 275 - 351
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||| ||||| || ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  275 agagaagaagttgtatgccaaattgtcgaagtgtgagttctggttaagtgaagtaagtttccttggccatattattt 351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 10856 - 10784
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  10856 aagaagttgtatgccaagttgtccaaatgtgaattctggttaagtgaagtaagttttcttggccatatcattt 10784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 10167 - 10239
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  10167 aagaagttgtatgccaaattgtcaaaatgtgagttttggttaagtgaagtaagtttccttggccatattattt 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 16140 - 16068
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||    
T  16140 aagaggttgtatgccaagttgtcaaaatgtgaattttggttaagtgaagtaagttttcttggccatattattt 16068  T

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Target: scaffold0249 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 251 - 323
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||| |||||||| ||  ||||||||||||||||||||||||||||||||||||    
T  251 aagaagttgtatgccaagttgtccaaatgtgaattttggttaagtgaagtaagttttcttggccatattattt 323  T

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Target: scaffold0234 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 23357 - 23429
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  23357 aagaaggtgtatgccaagttgtccaaatgtgaattctggttaagtgaagtaagttttcttggccatattattt 23429  T

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Target: scaffold0192 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 28553 - 28481
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||| ||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  28553 aagaaattgtatgccaagttgtccaaatgtgaattctggttaagtgaagtaagttttcttggccatattattt 28481  T

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Target: scaffold0180 (Bit Score: 57; Significance: 7e-24; HSPs: 3)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 34031 - 34103
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  34031 aagaagatgtatgccaagttgtccaaatgtgaattctggttaagtgaagtaagttttcttggccatattattt 34103  T

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Target: scaffold0180; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 514 - 590
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||||||| || ||||||||| ||||||||||||| |||||||||||||| |||||||    
T  514 agagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttttcttggccacattattt 590  T

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Target: scaffold0180; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 4834 - 4910
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||||||| || ||||||||| ||||||||||||| |||||||||||||| |||||||    
T  4834 agagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttttcttggccacattattt 4910  T

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Target: scaffold0026 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 50838 - 50766
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||| |||||||| |||  |||||||||||||||||||||||||||||||||||    
T  50838 aagaagttgtatgccaagttgtccaaatgtgaattcttgttaagtgaagtaagttttcttggccatattattt 50766  T

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Target: scaffold0016 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 176622 - 176694
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||    
T  176622 aagaagttgtatgccaagttgtccaaatgtgaattctggttaagtgaagtaaattttcttggccatattattt 176694  T

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Target: chr5 (Bit Score: 57; Significance: 7e-24; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 22234377 - 22234449
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||| |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  22234377 aagaagttgtatgtcaagttatcaaaatgtgaattctggttaagtgaagtaagttttcttggccatattattt 22234449  T

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Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 21679231 - 21679307
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||| |||||||| || |||||  ||||||||||||| ||||||||||||||||||||||    
T  21679231 agagaagaagttgtatgccaaattgtcaaagtgcgagttttggttaagtgaagtgagttttcttggccatattattt 21679307  T

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Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 24618752 - 24618823
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattatt 89  Q
    |||| |||||||||||||||||| ||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  24618752 aagaggttgtatgccaagttgtccaaatgcgagttctggttaagtgaagtaagttttctgggccatattatt 24618823  T

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Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 24714983 - 24715054
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattatt 89  Q
    |||| |||||||||||||||||| ||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  24714983 aagaggttgtatgccaagttgtccaaatgcgagttctggttaagtgaagtaagttttctgggccatattatt 24715054  T

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Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 24748011 - 24748082
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattatt 89  Q
    |||| |||||||||||||||||| ||||| |||||| |||||||||||||||||||||| ||||||||||||    
T  24748011 aagaggttgtatgccaagttgtccaaatgcgagttctggttaagtgaagtaagttttctgggccatattatt 24748082  T

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Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 22504594 - 22504518
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| |||||||| || || |||||||    
T  22504594 agagaagaggttgtatgcaaagttgtcaaaatgtgagttctggttaagtgaagtgagttttctgggtcacattattt 22504518  T

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Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 20344197 - 20344121
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| || ||||| || || |||||||    
T  20344197 agagaagaggttgtatgctaagttgtcaaaatgtgagttctggttaagtgaagtgagctttctgggtcacattattt 20344121  T

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Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 20466553 - 20466628
Alignment:
Q  15 gagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||| | ||| || ||||||||||||||| ||||||    
T  20466553 gagaagaagttatatgccaagttgtcaaagtgtgagttctggttgaatgaggtgagttttcttggccatgttattt 20466628  T

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Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 14885448 - 14885520
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||||||||||||||||||| |||||| |||||||||||| || || || |||||||    
T  14885448 aagaggttgtatgctaagttgtcaaaatgtgagttctggttaaatgaagtaagtttcctgggtcacattattt 14885520  T

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Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 25849986 - 25849914
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| |||||||| |||||||||||| ||||||||||||| |||||||| || || |||||||    
T  25849986 aagaggttgtatgcaaagttgtcgaaatgtgagttctggttaagtgaagtgagttttctgggtcacattattt 25849914  T

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Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 37541838 - 37541910
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||| || || |||||||    
T  37541838 aagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagttttctgggtcacattattt 37541910  T

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Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 28893402 - 28893464
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccat 83  Q
    |||||||||||||||||||| || || |||||| ||||||||||||| |||||||| ||||||    
T  28893402 aagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccat 28893464  T

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Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 28914873 - 28914935
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccat 83  Q
    |||||||||||||||||||| || || |||||| ||||||||||||| |||||||| ||||||    
T  28914873 aagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccat 28914935  T

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Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 28922228 - 28922290
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccat 83  Q
    |||||||||||||||||||| || || |||||| ||||||||||||| |||||||| ||||||    
T  28922228 aagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccat 28922290  T

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Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 28930141 - 28930203
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccat 83  Q
    |||||||||||||||||||| || || |||||| ||||||||||||| |||||||| ||||||    
T  28930141 aagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccat 28930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 22463859 - 22463790
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||| || |  |||||| ||||||||||||| |||||||| |||||| ||||||    
T  22463859 aagttgtatgccaagttgtcgaagtacgagttctggttaagtgaagtgagttttctaggccatgttattt 22463790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 17267791 - 17267863
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||| ||||| |||||| ||||  || |||||||||| ||||| ||||| ||||||||||    
T  17267791 aagaagttgtatgccaaattgtcgaaatgtaagttttggctaagtgaagtgagtttccttggtcatattattt 17267863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 20777821 - 20777759
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccat 83  Q
    |||||||||||||||||||| || || |||||| ||||||||||||| ||||| || ||||||    
T  20777821 aagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagtttcctaggccat 20777759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 20823361 - 20823300
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcca 82  Q
    |||||||||||||||||||| || || |||||| ||||||||||||| ||||| || |||||    
T  20823361 aagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagtttcctcggcca 20823300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 23473160 - 23473084
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||| ||||| || |||||||| |||||||||  ||| | ||| || ||||||||||||||| ||||||    
T  23473160 agagaagaagttatatgctaaattgtcaaagtgtgagttctagttgaatgaggtgagttttcttggccatgttattt 23473084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 24796854 - 24796926
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||| ||||||||||| ||| |||||  ||||||||||||||| || || |||||||    
T  24796854 aagaggttgtatgctaagttatcaaaatgtgaattctggttacatgaagtaagttttctgggtcacattattt 24796926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 22349852 - 22349776
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||  | |||||||| ||||| || ||||||||| |||| |  ||||| ||||||||||||||| ||||||    
T  22349852 agagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttattt 22349776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 7e-24; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 21743899 - 21743971
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| |||||||    
T  21743899 aagaagttgtatgccaagttgtccaaatgtgagttctggttaagtgaagtaagtcttcttggccacattattt 21743971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 41308685 - 41308613
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||| |||||||| ||  ||||||||||||||||||||||||||||||||||||    
T  41308685 aagaagttgtatgccaagttgtccaaatgtgaattttggttaagtgaagtaagttttcttggccatattattt 41308613  T

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Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 23196596 - 23196668
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| |||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||| |||||||    
T  23196596 aagaggttgtatgccaagttgtccaaatgcgagttctggttaagtgaagtaagttttcttggccacattattt 23196668  T

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Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 20938406 - 20938482
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||||||| || ||||||||| |||||| ||||||||||||||||||||| |||||||    
T  20938406 agagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaattgaagtaagttttcttggccacattattt 20938482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 19661483 - 19661555
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| |||||||| || ||||||||| ||||||||||||| ||||||| |||||| |||||||    
T  19661483 aagaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttttcctggccacattattt 19661555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 19856317 - 19856245
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| ||||||||||| |||||||||  |||||||||||| ||||| |||||||| |||||||    
T  19856317 aagaagttgtatgctaagttgtcaaagtgtgagttctagttaagtgaagtgagtttccttggccacattattt 19856245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 24097950 - 24098022
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||||| || || |||||||    
T  24097950 aagaagttgtatgctaagttgtcaaagtgtgagttctggttaagtgaagtgagttttctgggtcacattattt 24098022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 20855110 - 20855179
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||| || || |||||| ||||||||||||| |||||||| |||||| ||||||    
T  20855110 aagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccatgttattt 20855179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 31538344 - 31538416
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||| || || |||||||    
T  31538344 aagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagttttctgggtcacattattt 31538416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 48424916 - 48424844
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||| || || |||||||    
T  48424916 aagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagttttctgggtcacattattt 48424844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 52987784 - 52987712
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||| || || |||||||    
T  52987784 aagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagttttctgggtcacattattt 52987712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 20296418 - 20296352
Alignment:
Q  24 ttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||| ||||||||||||||||||||| ||||||||||||| || ||||| || || |||||||    
T  20296418 ttgtatgcaaagttgtcaaaatgtgagttctggttaagtgaagtgagctttctgggtcacattattt 20296352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 20834243 - 20834319
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| | ||||||||| |||||||| || ||||||||| ||||| ||||||  |||||||||||||| |||||||    
T  20834243 agagaaaaggttgtatgctaagttgtcgaagtgtgagttctggttatgtgaagcgagttttcttggccacattattt 20834319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 21952921 - 21952849
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||| ||||| || ||||| || || |||||||    
T  21952921 aagaggttgtatgcgaagttgtcaaaatgtgagttctggttaagcgaagtgagctttctgggtcacattattt 21952849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 38911173 - 38911245
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||| |||| |||||||||||| ||||||||||||| || ||||| || ||||||||||    
T  38911173 aagaggttgtatgctaagctgtcgaaatgtgagttctggttaagtgaagtgagctttctgggtcatattattt 38911245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 37679092 - 37679036
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtttt 74  Q
    |||| ||||||||| ||||| ||||||||||| ||| ||||| ||||||||||||||    
T  37679092 aagaggttgtatgctaagttatcaaaatgtgaattctggttaggtgaagtaagtttt 37679036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 17043358 - 17043434
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||  | ||||| || |||||||| ||||| ||| |||| |  ||||||||||||||||||||| ||||||    
T  17043358 agagaagaaactttatgctaaattgtcaaagtgtgaattctggttgaaagaagtaagttttcttggccatgttattt 17043434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 19108384 - 19108308
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||  | |||||||| ||||| || ||||||||| |||| |  ||||| ||||||||||||||| ||||||    
T  19108384 agagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttattt 19108308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 2552 - 2622
Alignment:
Q  20 gaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  2552 gaagttgtatgccaagttgtctaaatgtgaattctggttaagtgaagtaagttttcttggccacattattt 2622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 29565 - 29635
Alignment:
Q  20 gaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  29565 gaagttgtatgccaagttgtctaaatgtgaattctggttaagtgaagtaagttttcttggccacattattt 29635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 5367 - 5439
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||| |||||||| ||  ||||||||| ||||||||||||||||||||||||||    
T  5367 aagaagttgtatgccaagttgtccaaatgtgaattttggttaagtggagtaagttttcttggccatattattt 5439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 1819 - 1895
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||| ||||| || ||||||||| ||||||||||||| |||||||||||||| |||||||    
T  1819 agagaagaagttgtatgccaaattgtcgaagtgtgagttctggttaagtgaagtgagttttcttggccacattattt 1895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 16427 - 16499
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||||| |||||||    
T  16427 aagaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtaagttttcttggccacattattt 16499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 11821 - 11749
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||| |||||||| ||| |||| |||||| ||||||||||||||||||||||||    
T  11821 aagaagttgtatgccaagttgtccaaatgtgaattctggttgagtgaattaagttttcttggccatattattt 11749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 11060 - 11136
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||| |||||||||||||||||  || |||||||||||||||| ||||| ||||||||||    
T  11060 agagaagaagttgtatgccaaattgtcaaaatgtgagttttggctaagtgaagtaagtttccttggtcatattattt 11136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 4614 - 4686
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||| ||||||||||    
T  4614 aagaagttgtatgccaaattgtcaaaatgtgagttttggttaagtgaagtaagtttccttggtcatattattt 4686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 24242 - 24170
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||||| |||||||    
T  24242 aagaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtaagttttcttggccacattattt 24170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 44698 - 44767
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||  |||||||    
T  44698 aagttgtatgccaagttgtcaaaatgtgaattttggttaagtgaagtaagttttcttggccccattattt 44767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 31951 - 32027
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||| |||||||| || |||||  ||||||||||||| ||||||||||||||||||||||    
T  31951 agagaagaagttgtatgccaaattgtcaaagtgcgagttttggttaagtgaagtgagttttcttggccatattattt 32027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 55178 - 55250
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| |||||||| ||||  |||||  |||||||||||||||||||||||||||| |||||||    
T  55178 aagaagttgtatgctaagttgtcgaaataagagttttggttaagtgaagtaagttttcttggccacattattt 55250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 48788 - 48864
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||| |||||||| || |||||  ||||||||||||| ||||||||||||||||||||||    
T  48788 agagaagaagttgtatgccaaattgtcaaagtgcgagttttggttaagtgaagtgagttttcttggccatattattt 48864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 150597 - 150525
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||| |||||||    
T  150597 aagaagttgtatgccaagttgtcaaagtgtgaattctggttaagtgaggtaagttttcttggccacattattt 150525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 193982 - 194054
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||| |||||| |||||||| || ||||||||| ||||||||||||| |||||||||||||| |||||||    
T  193982 aagaagtcgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttttcttggccacattattt 194054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 24807 - 24883
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||| ||||| || || ||||| ||||| ||| |||| |  || |||||||||||||||||| ||||||    
T  24807 agagaagaagttatatgctaaattatcaaagtgtgaattctggttgaaagaggtaagttttcttggccatgttattt 24883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 1894 - 1825
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||| |||||||| ||  |||||||||||||||||||||||| |||||||||||    
T  1894 aagttgtatgccaagttgtccaaatgtgaattttggttaagtgaagtaagttttcttgaccatattattt 1825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 5974 - 6043
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||| || || |||||| ||||||||||||| ||||||||||||||||||||||    
T  5974 aagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttcttggccatattattt 6043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1646 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1646
Description:

Target: scaffold1646; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 1352 - 1280
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| || ||||||||||| |||||  ||||||||||||||||||| ||||||||||||||||    
T  1352 aagaagttgtatgctaaattgtcaaaatgcgagttttggttaagtgaagtaagtttccttggccatattattt 1280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1477 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1477
Description:

Target: scaffold1477; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 255 - 183
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||| || |||||||||||||| |||||||    
T  255 aagaagttgtatgccaagttgtcaaagtgtgatttctggttaagtgatgttagttttcttggccacattattt 183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1373 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1373
Description:

Target: scaffold1373; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 1112 - 1184
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||||||| |||||||| || ||||||||||    
T  1112 aagaggttgtatgcaaagttgtcaaaatgtgagttctggttaagtgaagtgagttttctgggtcatattattt 1184  T

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Target: scaffold0235 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 9731 - 9807
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||||||| || ||||||||| |||||||||||||||| ||||||||||| |||||||    
T  9731 agagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtaagatttcttggccacattattt 9807  T

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Target: scaffold0235; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 19945 - 20021
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||||||| || ||||||||| |||||||||||||||| ||||||||||| |||||||    
T  19945 agagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtaagctttcttggccacattattt 20021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 42949 - 42881
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcca 82  Q
    |||||||||||||||||| |||||||| || ||||||||| |||||||||||||||| |||||||||||    
T  42949 agagaagaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtaagctttcttggcca 42881  T

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Target: scaffold0089 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 550 - 626
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||||||| || ||||||||| ||||||||||||| |||||||||||||| |||||||    
T  550 agagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttttcttggccacattattt 626  T

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Target: scaffold0089; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 14991 - 15063
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| |||||||| ||||||||||||  |||||||||||| || ||||| || || |||||||    
T  14991 aagaggttgtatgcaaagttgtcgaaatgtgagttctagttaagtgaagtgagctttctgggtcacattattt 15063  T

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Target: scaffold0046 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 80109 - 80181
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| || ||||||||||| |||||  ||||||||||||||||||| ||||||||||||||||    
T  80109 aagaagttgtatgctaaattgtcaaaatgcgagttttggttaagtgaagtaagtttccttggccatattattt 80181  T

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Target: scaffold0035 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 4777 - 4705
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| |||||||| || ||||||||| ||||||||||||| |||||||||||||| |||||||    
T  4777 aagaagttgtatgctaagttgtcgaattgtgagttctggttaagtgaagtcagttttcttggccacattattt 4705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 45674 - 45749
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||| || ||||| || ||||||||| |||||||||||||||||||||||||||| |||||||    
T  45674 agagaagaagttgtatgctaa-ttgtcgaagtgtgagttctggttaagtgaagtaagttttcttggccacattattt 45749  T

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Target: scaffold0010; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 40611 - 40683
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||| || || |||||||    
T  40611 aagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagttttctgggtcacattattt 40683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 262256 - 262180
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||||||| |||||||| ||| ||||||||||||| |||||||||||||| |||||||    
T  262256 agagaaaaagttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagtgagttttcttggccacattattt 262180  T

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Target: scaffold0003 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 195272 - 195196
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||||||| |||||||| ||| ||||||||||||| |||||||||||||| |||||||    
T  195272 agagaaaaagttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagtgagttttcttggccacattattt 195196  T

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Target: scaffold1288 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 1129 - 1204
Alignment:
Q  15 gagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||||||||| || ||||| ||  ||||||||||||| |||||||||||||| |||||||    
T  1129 gagaagaagttgtatgccaagttgtcgaagtgtgaattttggttaagtgaagtgagttttcttggccacattattt 1204  T

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Target: scaffold0053 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 47315 - 47384
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||| | ||||||||||||||| ||  |||||||||||||| |||||||||||||||||||||    
T  47315 aagttgtatgcgacgttgtcaaaatgtgaattttggttaagtgaagtaggttttcttggccatattattt 47384  T

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Target: scaffold0053; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 56121 - 56197
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||||||| |||||||| ||| ||||||||||||| ||||||||| |||| |||||||    
T  56121 agagaaaaagttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagtgagttttcttagccacattattt 56197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 37676 - 37604
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| ||||||||||| ||||||||  |||||||| |||| |||||||||||||| |||||||    
T  37676 aagaagttgtatgctaagttgtcaaagtgtgagttttggttaagtaaagtgagttttcttggccacattattt 37604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 9086 - 9158
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||||||||||||||| |||||||| ||| ||||| |||||||  |||||||| ||||||||||||    
T  9086 aagaagttgtatgccaagttgtccaaatgtgaattctggttatgtgaagtgtgttttcttcgccatattattt 9158  T

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Target: scaffold0124 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 14228 - 14156
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| |||||||| || ||||||||| |||||| |||||| |||||||||||||| |||||||    
T  14228 aagaagttgtatgctaagttgtcgaagtgtgagttctggttaattgaagtgagttttcttggccacattattt 14156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 21914 - 21842
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||| ||||| |||||||||||||||||   |||||||||||||||||| ||||| ||||||||||    
T  21914 aagaagttgtaagccaaattgtcaaaatgtgagttttagttaagtgaagtaagtttccttggtcatattattt 21842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 45; Significance: 1e-16; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 28650 - 28578
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||| ||| ||||||||||||||||||||| |||||  ||||||||||||| ||||||| |||||||    
T  28650 aagaagttgtctgcgaagttgtcaaaatgtgagttctggttagatgaagtaagttttgttggccacattattt 28578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 50454 - 50530
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||||||| || || ||||||  |||||||||||| || |||||||||||||||||||    
T  50454 agagaaaaagttgtatgctaagttgtcgaagtgcgagttctagttaagtgaagttagctttcttggccatattattt 50530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 59488 - 59564
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||||||| || || ||||||  |||||||||||| || |||||||||||||||||||    
T  59488 agagaaaaagttgtatgctaagttgtcgaagtgcgagttctagttaagtgaagttagctttcttggccatattattt 59564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 65876 - 65952
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||||||| || || ||||||  |||||||||||| || |||||||||||||||||||    
T  65876 agagaaaaagttgtatgctaagttgtcgaagtgcgagttctagttaagtgaagttagctttcttggccatattattt 65952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 22733 - 22661
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||| ||||||||||||||||| ||||||||| |||| | ||| |||||||||||||||||| ||||||    
T  22733 aagaagttatatgccaagttgtcaaagtgtgagttctggttgaatgaggtaagttttcttggccatgttattt 22661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 114591 - 114515
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||| ||||||||||| ||||| || || |||||| |||||| |||||| ||||||||||||||||||||||    
T  114591 agagaagaaattgtatgccaaattgtcgaagtgcgagttctggttaaatgaagtgagttttcttggccatattattt 114515  T

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Target: scaffold0004 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 201746 - 201818
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| |||||||||| | ||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||    
T  201746 aagaagctgtatgccaaatggtccaaatgtgaattctggttaagtgaagtaaattttcttggccatattattt 201818  T

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Target: scaffold0004; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 324736 - 324660
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||| ||| || ||||| ||| |||||||||||||||||||||||||||| |||||||    
T  324736 agagaaaaagttgtatgctaagtcgtcgaagtgtgaattctggttaagtgaagtaagttttcttggccacattattt 324660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 1908 - 1839
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||| || || |||||| ||||||||||||| |||||||| ||||| |||||||    
T  1908 aagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccacattattt 1839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 31597 - 31669
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| ||| ||||||| ||||||||| ||||||||||||| |||||||| || || |||||||    
T  31597 aagaagttgtatgcaaagctgtcaaagtgtgagttctggttaagtgaagtgagttttctgggtcacattattt 31669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 28961 - 28889
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||||||| || ||||| || || |||||||    
T  28961 aagaggttgtatgcgaagttgtcaaaatgtgagttctggttaagtgaagtgagctttctgggtcacattattt 28889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 5144 - 5068
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||| ||||| ||||||||||| ||||||||| |||| | ||| || ||||||||||||||| ||||||    
T  5144 agagaagaagttatatgcaaagttgtcaaagtgtgagttctggttgaatgaggtgagttttcttggccatgttattt 5068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 53077 - 53001
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||  |||||||| || ||||||||| ||||||||||||| |||||||| ||||| |||||||    
T  53077 agagaaaaagttgtatgttaagttgtcgaagtgtgagttctggttaagtgaagtgagttttctgggccacattattt 53001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 44811 - 44739
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| ||| ||||||||||||||||| ||||||||||||| |||||||| || || |||||||    
T  44811 aagaggttgtatgctaagctgtcaaaatgtgagttctggttaagtgaagtgagttttctaggtcacattattt 44739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 3227 - 3303
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||| |||||||| || ||||||||| |||| ||||||||  ||||||||||||| |||||||    
T  3227 agagaaaaagttgtatgctaagttgtcgaagtgtgagttctggtttagtgaagtttgttttcttggccacattattt 3303  T

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Target: scaffold0034; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 69395 - 69334
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcca 82  Q
    |||||||||||||||||||| || || ||||||  |||||||||||| |||||||| |||||    
T  69395 aagttgtatgccaagttgtcgaagtgcgagttcttgttaagtgaagtgagttttctaggcca 69334  T

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Target: scaffold0020 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 99836 - 99912
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||| ||||| |||||||| || ||||||||| ||||||||||||| |||||||| ||||| |||||||    
T  99836 agagaaaaagttatatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttttctgggccacattattt 99912  T

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Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 250648 - 250576
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| |||||||| |||||||||||| ||||||||||||| |||||||| || || |||||||    
T  250648 aagaggttgtatgctaagttgtcgaaatgtgagttctggttaagtgaagtgagttttctgggtcacattattt 250576  T

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Target: scaffold0708 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 6423 - 6481
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttct 76  Q
    |||||||||||||| ||||||| ||||||||||||  ||||||||||||| ||||||||    
T  6423 aagaagttgtatgcaaagttgttaaaatgtgagttatggttaagtgaagtgagttttct 6481  T

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Target: scaffold0102 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 41725 - 41655
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattat 88  Q
    ||||||||||||| |||| |||| || ||||| ||| ||||| | ||||||||||||||||||||||||||    
T  41725 aagaagttgtatgacaagctgtccaagtgtgaattctggttacgcgaagtaagttttcttggccatattat 41655  T

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Target: scaffold0062 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 9061 - 9119
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttct 76  Q
    |||| ||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||    
T  9061 aagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagttttct 9119  T

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Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 268633 - 268564
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||||||||| || || |||||| ||||||||||||| ||||| || |||||| ||||||    
T  268633 aagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagtttcctaggccatgttattt 268564  T

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Target: scaffold2111 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold2111
Description:

Target: scaffold2111; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 861 - 937
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||||||||||||| || || || | |||| ||||||| ||||| | ||||||||||||||||||||    
T  861 agagaaaaagttgtatgccaagttttcgaagtgcgggttctggttaagggaagtgaattttcttggccatattattt 937  T

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Target: scaffold0420 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 673 - 602
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||||| || ||||| |||||||||||  ||| |||||||||||||||||| ||||| |||||||    
T  673 aagaagttgtatgctaaattgtcgaaatgtgagttttggt-aagtgaagtaagttttctgggccacattattt 602  T

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Target: scaffold0222 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 9093 - 9017
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| ||||||| ||| |||||||| || |||||||||  |||||||||||| |||||||| ||||| |||||||    
T  9093 agagaaaaagttgtgtgctaagttgtcgaagtgtgagttctagttaagtgaagtgagttttctgggccacattattt 9017  T

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Target: scaffold0203 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 12573 - 12641
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcca 82  Q
    |||||| ||||||||||| ||||||||||| ||| ||||| ||| ||||||||| |||||||| |||||    
T  12573 agagaaaaagttgtatgctaagttgtcaaagtgtaagttctggtaaagtgaagtgagttttctgggcca 12641  T

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Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 24572 - 24648
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||| ||||| ||||||||||||||||| ||| |||| | ||| || |||||||| |||||| ||||||    
T  24572 agagaagaagttatatgctaagttgtcaaaatgtgaattctggttgaatgaggtgagttttctaggccatgttattt 24648  T

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Target: scaffold0018; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 11016 - 11091
Alignment:
Q  15 gagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||| | ||||| ||||||||||| |||||  || |||| | |||||||||||||||||||||| ||||||    
T  11016 gagaagaagctttatgctaagttgtcaaagtgtgaactctggttgaatgaagtaagttttcttggccatgttattt 11091  T

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Target: scaffold0018; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 17208 - 17283
Alignment:
Q  15 gagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||| | ||||| ||||||||||| |||||  || |||| | |||||||||||||||||||||| ||||||    
T  17208 gagaagaagctttatgctaagttgtcaaagtgtgaactctggttgaatgaagtaagttttcttggccatgttattt 17283  T

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Target: scaffold0206 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 25138 - 25077
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcca 82  Q
    |||||||||||||||||||| || || |||||| |||||| |||||| |||||||| |||||    
T  25138 aagttgtatgccaagttgtcgaagtgggagttctggttaactgaagtgagttttctaggcca 25077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1715 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1715
Description:

Target: scaffold1715; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 974 - 922
Alignment:
Q  24 ttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttct 76  Q
    |||||||| ||| |||||||||||||||||  |||||||||||| ||||||||    
T  974 ttgtatgcaaagctgtcaaaatgtgagttctagttaagtgaagtgagttttct 922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 22459 - 22535
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||| | ||| ||||||||||||||||| ||||| ||| |||| | ||| || |||||| |||||||||||||||    
T  22459 agagaaaacgttatatgccaagttgtcaaagtgtgaattctggttgaatgaggtgagtttttttggccatattattt 22535  T

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Target: scaffold0445 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 2124 - 2199
Alignment:
Q  15 gagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||  |||||||||||||||| ||||| ||| |||| | ||| || ||||||||||| ||| ||||||    
T  2124 gagaagaagttaaatgccaagttgtcaaagtgtgaattctggttgaatgaggtgagttttcttggtcatgttattt 2199  T

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Target: scaffold0331 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 16252 - 16315
Alignment:
Q  15 gagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttg 78  Q
    ||||||||||| ||||| ||||||||||| ||||| ||| |||| | ||| |||||||||||||    
T  16252 gagaagaagttatatgctaagttgtcaaagtgtgaattctggttgaatgaggtaagttttcttg 16315  T

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Target: scaffold0083 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 9309 - 9384
Alignment:
Q  15 gagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||| ||||||||| ||||||| ||||| ||| ||||   ||| || ||||||||||||||| ||||||    
T  9309 gagaagaagttatatgccaagctgtcaaagtgtgaattctggttggatgaggtgagttttcttggccatgttattt 9384  T

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Target: scaffold0058 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 21145 - 21076
Alignment:
Q  21 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||||| || ||||  |||||| ||||  |||||||| |||||||||||||||| || |||||||    
T  21145 aagttgtatgctaaattgttgaaatgttagttttggttaagtaaagtaagttttcttggtcacattattt 21076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 341 - 417
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||| | ||||| || |||||||| ||||| ||| |||| | ||| || ||||||||||||||| ||||||    
T  341 agagaagaagctttatgctaaattgtcaaagtgtgaattctggttgaatgaggtgagttttcttggccatgttattt 417  T

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Target: scaffold0431 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 9398 - 9322
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||  | |||||||| ||||| || ||||||||| |||| |  ||||| ||||||||||||||| ||||||    
T  9398 agagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgagttttcttggccatgttattt 9322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 6163 - 6239
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||||| ||||| ||||||||||| ||||| ||| |||| | ||| || | ||||||||| ||| ||||||    
T  6163 agagaagaagttatatgctaagttgtcaaagtgtgaattctggttgaatgaggtcatttttcttggtcatgttattt 6239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 14500 - 14424
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||||||||| | ||| | || |||||||| ||||||||| |||| | ||| || ||||||||||||||| ||||||    
T  14500 agagaagaagctatattctaaattgtcaaagtgtgagttctggttgaatgaggttagttttcttggccatgttattt 14424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 35778 - 35706
Alignment:
Q  18 aagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    |||| ||||||||| |||||||||||||| ||||||  |||||| ||||| || ||||| || || |||||||    
T  35778 aagaggttgtatgcgaagttgtcaaaatgcgagttctcgttaagcgaagtgagctttctgggtcacattattt 35706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 11513 - 11589
Alignment:
Q  14 agagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 90  Q
    ||||||||| || ||||| || ||||| || ||||| ||| |||| |  ||||||||||||||||||||| ||||||    
T  11513 agagaagaaattttatgctaaattgtctaagtgtgaattctggttgaaggaagtaagttttcttggccatgttattt 11589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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