View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0126_low_13 (Length: 220)

Name: NF0126_low_13
Description: NF0126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0126_low_13
NF0126_low_13
[»] scaffold0079 (2 HSPs)
scaffold0079 (6-128)||(2672-2794)
scaffold0079 (6-128)||(35451-35574)
[»] scaffold0149 (2 HSPs)
scaffold0149 (6-125)||(5578-5697)
scaffold0149 (6-125)||(10009-10128)
[»] scaffold0261 (2 HSPs)
scaffold0261 (6-128)||(21743-21865)
scaffold0261 (6-128)||(13564-13686)
[»] scaffold0244 (1 HSPs)
scaffold0244 (6-128)||(19308-19430)
[»] scaffold0108 (1 HSPs)
scaffold0108 (6-128)||(49060-49182)
[»] scaffold0054 (1 HSPs)
scaffold0054 (6-128)||(64736-64858)
[»] scaffold0031 (2 HSPs)
scaffold0031 (6-128)||(109586-109708)
scaffold0031 (6-128)||(55219-55341)
[»] scaffold0026 (1 HSPs)
scaffold0026 (6-128)||(50766-50888)
[»] chr8 (40 HSPs)
chr8 (6-128)||(23656918-23657040)
chr8 (6-128)||(21927418-21927541)
chr8 (6-128)||(20008589-20008711)
chr8 (6-128)||(19861426-19861548)
chr8 (6-117)||(31415137-31415248)
chr8 (6-128)||(22052854-22052976)
chr8 (6-128)||(27356527-27356649)
chr8 (6-128)||(21323947-21324068)
chr8 (6-128)||(22372922-22373044)
chr8 (6-128)||(20390090-20390212)
chr8 (6-128)||(20394801-20394923)
chr8 (14-120)||(29302102-29302208)
chr8 (6-128)||(16269892-16270014)
chr8 (6-128)||(31569510-31569632)
chr8 (8-128)||(4984033-4984153)
chr8 (11-128)||(6605649-6605766)
chr8 (20-128)||(23887015-23887123)
chr8 (6-128)||(15535374-15535496)
chr8 (6-128)||(21165206-21165328)
chr8 (6-128)||(22988721-22988843)
chr8 (6-128)||(30311812-30311934)
chr8 (6-128)||(18858568-18858690)
chr8 (6-128)||(19114681-19114803)
chr8 (6-128)||(20016931-20017053)
chr8 (6-128)||(22131709-22131831)
chr8 (11-117)||(28982913-28983019)
chr8 (11-117)||(28988132-28988238)
chr8 (6-81)||(22376121-22376196)
chr8 (6-128)||(32602135-32602258)
chr8 (6-128)||(17672691-17672813)
chr8 (6-128)||(19482732-19482854)
chr8 (6-128)||(19979958-19980080)
chr8 (11-128)||(14567133-14567250)
chr8 (8-90)||(16875765-16875847)
chr8 (6-128)||(22041818-22041940)
chr8 (6-128)||(22118843-22118965)
chr8 (6-128)||(22127627-22127749)
chr8 (8-117)||(21849007-21849116)
chr8 (20-96)||(22247115-22247191)
chr8 (14-121)||(23652039-23652146)
[»] chr2 (35 HSPs)
chr2 (6-128)||(25264610-25264732)
chr2 (6-128)||(19650815-19650937)
chr2 (6-128)||(23112292-23112414)
chr2 (11-128)||(31832214-31832331)
chr2 (12-128)||(19717788-19717904)
chr2 (6-128)||(23098783-23098905)
chr2 (6-128)||(23278332-23278454)
chr2 (6-128)||(23295491-23295613)
chr2 (6-120)||(24950154-24950268)
chr2 (6-128)||(27789296-27789418)
chr2 (6-128)||(21143806-21143928)
chr2 (6-128)||(24818995-24819117)
chr2 (6-128)||(24875515-24875637)
chr2 (6-128)||(24706247-24706369)
chr2 (11-128)||(1065307-1065424)
chr2 (6-128)||(12575909-12576031)
chr2 (6-128)||(24677045-24677167)
chr2 (6-128)||(24711590-24711712)
chr2 (6-128)||(27372825-27372947)
chr2 (6-128)||(41607150-41607272)
chr2 (6-121)||(22323621-22323736)
chr2 (13-120)||(27208944-27209051)
chr2 (6-128)||(9485772-9485894)
chr2 (6-128)||(27219572-27219694)
chr2 (20-128)||(24263926-24264034)
chr2 (6-128)||(10870406-10870528)
chr2 (6-128)||(16926916-16927038)
chr2 (6-128)||(17000556-17000678)
chr2 (6-128)||(44384335-44384457)
chr2 (14-128)||(45534496-45534610)
chr2 (6-121)||(21324031-21324146)
chr2 (8-128)||(23189475-23189594)
chr2 (6-61)||(9337205-9337260)
chr2 (8-90)||(24829955-24830037)
chr2 (32-128)||(30010975-30011071)
[»] chr1 (31 HSPs)
chr1 (6-128)||(21743849-21743971)
chr1 (6-128)||(41308613-41308735)
chr1 (6-128)||(19661433-19661555)
chr1 (6-128)||(23196546-23196668)
chr1 (6-128)||(19856245-19856367)
chr1 (6-128)||(20938360-20938482)
chr1 (6-128)||(24097900-24098022)
chr1 (11-128)||(31538299-31538416)
chr1 (11-128)||(48424844-48424961)
chr1 (11-128)||(52987712-52987829)
chr1 (6-128)||(21952849-21952971)
chr1 (11-128)||(38911128-38911245)
chr1 (6-128)||(20296352-20296474)
chr1 (12-112)||(37679036-37679136)
chr1 (6-128)||(20834197-20834319)
chr1 (6-128)||(51331790-51331912)
chr1 (9-128)||(19108308-19108427)
chr1 (6-128)||(17043312-17043434)
chr1 (6-128)||(21234028-21234150)
chr1 (6-128)||(33389326-33389448)
chr1 (6-128)||(20855057-20855179)
chr1 (6-128)||(21832242-21832364)
chr1 (6-128)||(21838890-21839012)
chr1 (6-128)||(24792913-24793035)
chr1 (6-121)||(22503586-22503701)
chr1 (6-128)||(16348893-16349015)
chr1 (6-128)||(21026113-21026235)
chr1 (6-128)||(41351959-41352081)
chr1 (8-90)||(20829691-20829773)
chr1 (6-128)||(430413-430535)
chr1 (8-128)||(21862672-21862792)
[»] scaffold0309 (1 HSPs)
scaffold0309 (6-128)||(11749-11871)
[»] scaffold0304 (1 HSPs)
scaffold0304 (6-128)||(1713-1835)
[»] scaffold0298 (1 HSPs)
scaffold0298 (6-128)||(10285-10407)
[»] scaffold0266 (1 HSPs)
scaffold0266 (6-128)||(16068-16190)
[»] scaffold0049 (1 HSPs)
scaffold0049 (6-128)||(50103-50225)
[»] chr7 (41 HSPs)
chr7 (6-128)||(14262456-14262578)
chr7 (6-128)||(15100815-15100937)
chr7 (6-128)||(16070507-16070629)
chr7 (6-128)||(12205012-12205134)
chr7 (8-128)||(19149126-19149246)
chr7 (8-128)||(20748525-20748645)
chr7 (8-128)||(19614590-19614710)
chr7 (6-128)||(13675367-13675489)
chr7 (6-128)||(15342346-15342468)
chr7 (6-128)||(11386641-11386763)
chr7 (6-128)||(12458555-12458677)
chr7 (6-128)||(13023272-13023394)
chr7 (6-128)||(14139594-14139716)
chr7 (6-128)||(13966880-13967002)
chr7 (6-128)||(14284588-14284710)
chr7 (6-128)||(16948684-16948806)
chr7 (11-128)||(26093015-26093132)
chr7 (11-128)||(49154216-49154333)
chr7 (6-128)||(12689416-12689538)
chr7 (6-128)||(15626439-15626561)
chr7 (6-128)||(48813486-48813607)
chr7 (11-128)||(11301430-11301547)
chr7 (11-128)||(26116807-26116924)
chr7 (6-128)||(18052165-18052287)
chr7 (6-128)||(23504082-23504204)
chr7 (6-128)||(15584-15706)
chr7 (6-128)||(8709519-8709641)
chr7 (6-128)||(11235447-11235569)
chr7 (6-128)||(11551336-11551458)
chr7 (6-128)||(14334310-14334432)
chr7 (6-128)||(14956468-14956590)
chr7 (6-128)||(15147119-15147241)
chr7 (8-128)||(15159293-15159413)
chr7 (14-128)||(11770483-11770597)
chr7 (6-128)||(44789585-44789707)
chr7 (8-90)||(7825852-7825934)
chr7 (6-128)||(10872604-10872726)
chr7 (8-62)||(13688021-13688075)
chr7 (38-128)||(14213588-14213678)
chr7 (8-90)||(27106010-27106092)
chr7 (8-90)||(27172233-27172315)
[»] chr5 (42 HSPs)
chr5 (6-128)||(22234327-22234449)
chr5 (6-127)||(24618702-24618823)
chr5 (6-127)||(24714933-24715054)
chr5 (6-127)||(24747961-24748082)
chr5 (8-128)||(21679187-21679307)
chr5 (6-128)||(22504518-22504640)
chr5 (6-128)||(20344121-20344243)
chr5 (6-128)||(20466506-20466628)
chr5 (6-128)||(25849914-25850036)
chr5 (6-128)||(17267741-17267863)
chr5 (6-128)||(22349776-22349898)
chr5 (6-128)||(41772699-41772821)
chr5 (17-128)||(14885409-14885520)
chr5 (17-128)||(37541799-37541910)
chr5 (6-128)||(19771817-19771939)
chr5 (11-128)||(24796809-24796926)
chr5 (6-121)||(20801261-20801376)
chr5 (33-128)||(23473084-23473179)
chr5 (14-128)||(14998154-14998268)
chr5 (6-128)||(16358359-16358481)
chr5 (6-128)||(18780971-18781093)
chr5 (6-128)||(22331294-22331416)
chr5 (6-128)||(26737134-26737256)
chr5 (6-128)||(27612211-27612333)
chr5 (6-128)||(27666897-27667019)
chr5 (6-128)||(34568351-34568473)
chr5 (6-128)||(37289903-37290025)
chr5 (50-121)||(28893393-28893464)
chr5 (50-121)||(28914864-28914935)
chr5 (50-121)||(28922219-28922290)
chr5 (50-121)||(28930132-28930203)
chr5 (6-128)||(22136525-22136647)
chr5 (6-128)||(22463790-22463912)
chr5 (6-128)||(27520263-27520385)
chr5 (8-126)||(27683809-27683927)
chr5 (6-128)||(40710637-40710759)
chr5 (50-121)||(20777759-20777830)
chr5 (50-120)||(20823300-20823370)
chr5 (8-90)||(21935597-21935679)
chr5 (6-60)||(29474480-29474534)
chr5 (6-60)||(21337701-21337755)
chr5 (6-87)||(21562431-21562512)
[»] chr4 (36 HSPs)
chr4 (6-128)||(15323142-15323264)
chr4 (6-128)||(15357345-15357467)
chr4 (9-128)||(15072284-15072403)
chr4 (6-128)||(15001590-15001711)
chr4 (6-128)||(16149636-16149758)
chr4 (6-128)||(16153782-16153904)
chr4 (6-128)||(8707836-8707958)
chr4 (6-128)||(14696038-14696160)
chr4 (11-128)||(3263024-3263141)
chr4 (6-128)||(51605017-51605139)
chr4 (11-128)||(29451767-29451884)
chr4 (9-128)||(14682492-14682611)
chr4 (11-114)||(44660096-44660199)
chr4 (6-128)||(8051588-8051710)
chr4 (6-128)||(12478525-12478647)
chr4 (6-120)||(14849331-14849445)
chr4 (6-128)||(19776758-19776880)
chr4 (6-128)||(23957672-23957794)
chr4 (6-128)||(16353472-16353595)
chr4 (6-128)||(14301944-14302066)
chr4 (6-128)||(18225411-18225533)
chr4 (6-128)||(27713261-27713383)
chr4 (6-128)||(40474965-40475087)
chr4 (6-126)||(18613789-18613909)
chr4 (6-120)||(1647502-1647616)
chr4 (6-128)||(8388337-8388459)
chr4 (6-128)||(11205457-11205578)
chr4 (6-128)||(15145850-15145972)
chr4 (6-68)||(15257913-15257975)
chr4 (6-128)||(27902311-27902433)
chr4 (6-126)||(14161397-14161517)
chr4 (6-60)||(16234957-16235011)
chr4 (65-128)||(15247849-15247910)
chr4 (8-90)||(15291385-15291467)
chr4 (27-128)||(1640326-1640427)
chr4 (6-58)||(17093114-17093166)
[»] chr3 (51 HSPs)
chr3 (6-128)||(31693638-31693760)
chr3 (6-128)||(31940457-31940579)
chr3 (6-128)||(12358980-12359102)
chr3 (6-128)||(15229157-15229279)
chr3 (6-128)||(15235025-15235147)
chr3 (8-128)||(14088227-14088347)
chr3 (6-128)||(11950361-11950483)
chr3 (8-128)||(13970575-13970695)
chr3 (8-128)||(17187928-17188048)
chr3 (6-128)||(12179892-12180014)
chr3 (11-128)||(16834968-16835085)
chr3 (6-128)||(16328113-16328235)
chr3 (6-128)||(16379381-16379503)
chr3 (6-131)||(11959622-11959747)
chr3 (8-128)||(10385225-10385345)
chr3 (11-128)||(28755872-28755989)
chr3 (6-128)||(41179076-41179198)
chr3 (6-128)||(15340813-15340935)
chr3 (6-128)||(15400981-15401103)
chr3 (6-128)||(13254234-13254356)
chr3 (6-128)||(14874963-14875085)
chr3 (6-128)||(15346709-15346831)
chr3 (6-128)||(16693708-16693830)
chr3 (14-128)||(16805419-16805533)
chr3 (6-128)||(44778801-44778923)
chr3 (6-128)||(48426991-48427113)
chr3 (23-128)||(18132816-18132921)
chr3 (11-128)||(47125498-47125615)
chr3 (6-128)||(5109075-5109197)
chr3 (6-128)||(10007144-10007266)
chr3 (6-128)||(12499792-12499914)
chr3 (6-128)||(13943578-13943700)
chr3 (6-128)||(15261174-15261296)
chr3 (6-128)||(15723398-15723520)
chr3 (6-128)||(16637317-16637439)
chr3 (6-128)||(20060518-20060640)
chr3 (20-128)||(10907754-10907862)
chr3 (32-128)||(15014246-15014342)
chr3 (6-128)||(5423394-5423516)
chr3 (6-128)||(6602280-6602402)
chr3 (26-120)||(10418518-10418612)
chr3 (8-73)||(11889746-11889811)
chr3 (6-114)||(13318955-13319063)
chr3 (6-60)||(3687555-3687609)
chr3 (6-128)||(12888253-12888375)
chr3 (6-128)||(15587856-15587978)
chr3 (8-90)||(30139398-30139480)
chr3 (8-90)||(30148949-30149031)
chr3 (6-128)||(53383482-53383604)
chr3 (8-90)||(8272865-8272947)
chr3 (6-128)||(17491394-17491516)
[»] scaffold0404 (1 HSPs)
scaffold0404 (8-128)||(6706-6826)
[»] scaffold1830 (1 HSPs)
scaffold1830 (6-128)||(950-1072)
[»] scaffold0751 (1 HSPs)
scaffold0751 (6-128)||(4132-4254)
[»] scaffold0585 (1 HSPs)
scaffold0585 (6-128)||(5317-5439)
[»] scaffold0523 (1 HSPs)
scaffold0523 (6-128)||(1825-1947)
[»] scaffold0001 (3 HSPs)
scaffold0001 (6-128)||(453441-453563)
scaffold0001 (17-128)||(515592-515703)
scaffold0001 (6-121)||(494981-495096)
[»] chr6 (43 HSPs)
chr6 (6-128)||(14378286-14378408)
chr6 (6-128)||(14379836-14379958)
chr6 (6-128)||(19454813-19454935)
chr6 (6-128)||(5295576-5295698)
chr6 (6-128)||(19487642-19487764)
chr6 (6-128)||(25769633-25769755)
chr6 (8-128)||(19881087-19881207)
chr6 (6-128)||(18796479-18796601)
chr6 (6-120)||(21473398-21473512)
chr6 (8-128)||(34643958-34644078)
chr6 (6-128)||(19436791-19436913)
chr6 (6-128)||(10467219-10467341)
chr6 (6-128)||(22828725-22828847)
chr6 (6-128)||(18965665-18965787)
chr6 (11-128)||(24366201-24366318)
chr6 (6-121)||(16926008-16926123)
chr6 (6-128)||(24294152-24294274)
chr6 (6-128)||(27564203-27564325)
chr6 (20-120)||(5837603-5837703)
chr6 (6-121)||(16961852-16961967)
chr6 (50-128)||(21568405-21568483)
chr6 (6-128)||(25608231-25608353)
chr6 (6-128)||(28261567-28261689)
chr6 (6-128)||(28284227-28284349)
chr6 (6-128)||(28340316-28340438)
chr6 (6-81)||(18196103-18196178)
chr6 (6-128)||(2873173-2873295)
chr6 (6-128)||(22435658-22435780)
chr6 (6-128)||(22444056-22444178)
chr6 (6-128)||(25114341-25114463)
chr6 (10-128)||(28281187-28281305)
chr6 (9-128)||(19866476-19866595)
chr6 (50-120)||(15461133-15461203)
chr6 (8-90)||(16380745-16380827)
chr6 (6-128)||(27189225-27189347)
chr6 (6-128)||(27259893-27260015)
chr6 (6-131)||(22760825-22760950)
chr6 (8-60)||(23080326-23080378)
chr6 (14-121)||(25763606-25763713)
chr6 (8-90)||(16648341-16648423)
chr6 (6-128)||(20634310-20634432)
chr6 (6-75)||(23086141-23086210)
chr6 (32-128)||(18450292-18450388)
[»] scaffold0865 (1 HSPs)
scaffold0865 (6-128)||(2500-2622)
[»] scaffold0509 (1 HSPs)
scaffold0509 (6-128)||(10784-10906)
[»] scaffold0476 (1 HSPs)
scaffold0476 (6-128)||(1773-1895)
[»] scaffold0192 (1 HSPs)
scaffold0192 (6-128)||(28481-28603)
[»] scaffold0133 (1 HSPs)
scaffold0133 (6-128)||(29513-29635)
[»] scaffold0106 (1 HSPs)
scaffold0106 (6-128)||(33290-33412)
[»] scaffold0011 (3 HSPs)
scaffold0011 (6-128)||(150525-150647)
scaffold0011 (6-128)||(24761-24883)
scaffold0011 (23-128)||(193949-194054)
[»] scaffold1477 (1 HSPs)
scaffold1477 (6-128)||(183-305)
[»] scaffold0180 (3 HSPs)
scaffold0180 (6-128)||(33981-34103)
scaffold0180 (6-128)||(468-590)
scaffold0180 (6-128)||(4788-4910)
[»] scaffold0104 (2 HSPs)
scaffold0104 (6-128)||(24170-24292)
scaffold0104 (6-128)||(44645-44767)
[»] scaffold0076 (3 HSPs)
scaffold0076 (8-128)||(31907-32027)
scaffold0076 (6-128)||(55128-55250)
scaffold0076 (8-90)||(42252-42334)
[»] scaffold0028 (4 HSPs)
scaffold0028 (8-128)||(48744-48864)
scaffold0028 (9-128)||(16892-17011)
scaffold0028 (9-128)||(10430-10549)
scaffold0028 (6-128)||(45107-45229)
[»] scaffold0156 (1 HSPs)
scaffold0156 (29-128)||(36069-36168)
[»] scaffold1288 (1 HSPs)
scaffold1288 (6-128)||(1082-1204)
[»] scaffold0239 (1 HSPs)
scaffold0239 (6-128)||(11014-11136)
[»] scaffold0053 (2 HSPs)
scaffold0053 (6-128)||(47262-47384)
scaffold0053 (6-128)||(56075-56197)
[»] scaffold0035 (1 HSPs)
scaffold0035 (6-128)||(4705-4827)
[»] scaffold0034 (2 HSPs)
scaffold0034 (6-128)||(3181-3303)
scaffold0034 (50-120)||(69334-69404)
[»] scaffold0016 (1 HSPs)
scaffold0016 (6-128)||(176572-176694)
[»] scaffold0005 (1 HSPs)
scaffold0005 (6-128)||(262180-262302)
[»] scaffold0003 (1 HSPs)
scaffold0003 (6-128)||(195196-195318)
[»] scaffold0730 (1 HSPs)
scaffold0730 (8-128)||(231-351)
[»] scaffold0090 (2 HSPs)
scaffold0090 (8-128)||(20805-20925)
scaffold0090 (8-128)||(24967-25087)
[»] scaffold0130 (2 HSPs)
scaffold0130 (6-128)||(9036-9158)
scaffold0130 (6-128)||(44871-44993)
[»] scaffold0124 (2 HSPs)
scaffold0124 (6-128)||(14156-14278)
scaffold0124 (8-90)||(6038-6120)
[»] scaffold0020 (1 HSPs)
scaffold0020 (6-128)||(99790-99912)
[»] scaffold0009 (1 HSPs)
scaffold0009 (6-128)||(250576-250698)
[»] scaffold0029 (2 HSPs)
scaffold0029 (8-128)||(114515-114635)
scaffold0029 (14-128)||(108047-108161)
[»] scaffold1373 (1 HSPs)
scaffold1373 (6-128)||(1062-1184)
[»] scaffold0420 (1 HSPs)
scaffold0420 (6-128)||(602-723)
[»] scaffold0190 (1 HSPs)
scaffold0190 (6-128)||(31547-31669)
[»] scaffold0139 (1 HSPs)
scaffold0139 (6-128)||(37604-37726)
[»] scaffold0126 (1 HSPs)
scaffold0126 (6-120)||(42881-42995)
[»] scaffold0074 (1 HSPs)
scaffold0074 (6-128)||(5068-5190)
[»] scaffold0067 (4 HSPs)
scaffold0067 (6-128)||(28578-28700)
scaffold0067 (6-128)||(50408-50530)
scaffold0067 (6-128)||(59442-59564)
scaffold0067 (6-128)||(65830-65952)
[»] scaffold0010 (3 HSPs)
scaffold0010 (6-128)||(45628-45749)
scaffold0010 (11-128)||(40566-40683)
scaffold0010 (6-128)||(3870-3992)
[»] scaffold0004 (2 HSPs)
scaffold0004 (6-128)||(324660-324782)
scaffold0004 (6-128)||(201696-201818)
[»] scaffold0102 (2 HSPs)
scaffold0102 (6-126)||(41655-41774)
scaffold0102 (6-60)||(51573-51627)
[»] scaffold1646 (1 HSPs)
scaffold1646 (6-128)||(1280-1402)
[»] scaffold0348 (1 HSPs)
scaffold0348 (6-128)||(10117-10239)
[»] scaffold0072 (1 HSPs)
scaffold0072 (6-128)||(53001-53123)
[»] scaffold0046 (1 HSPs)
scaffold0046 (6-128)||(80059-80181)
[»] scaffold0367 (1 HSPs)
scaffold0367 (13-128)||(16384-16499)
[»] scaffold0062 (1 HSPs)
scaffold0062 (11-114)||(9016-9119)
[»] scaffold0293 (1 HSPs)
scaffold0293 (6-128)||(14424-14546)
[»] scaffold0249 (1 HSPs)
scaffold0249 (50-128)||(245-323)
[»] scaffold0235 (2 HSPs)
scaffold0235 (6-128)||(9685-9807)
scaffold0235 (6-128)||(19899-20021)
[»] scaffold0234 (1 HSPs)
scaffold0234 (38-128)||(23339-23429)
[»] scaffold0222 (1 HSPs)
scaffold0222 (6-128)||(9017-9139)
[»] scaffold0203 (1 HSPs)
scaffold0203 (6-120)||(12527-12641)
[»] scaffold0089 (2 HSPs)
scaffold0089 (6-128)||(504-626)
scaffold0089 (11-128)||(14946-15063)
[»] scaffold0077 (1 HSPs)
scaffold0077 (6-116)||(19862-19967)
[»] scaffold0042 (2 HSPs)
scaffold0042 (20-128)||(22661-22769)
scaffold0042 (6-128)||(38048-38170)
[»] scaffold0431 (1 HSPs)
scaffold0431 (6-128)||(9322-9444)
[»] scaffold0213 (1 HSPs)
scaffold0213 (50-128)||(4608-4686)
[»] scaffold0088 (1 HSPs)
scaffold0088 (10-128)||(28889-29007)
[»] scaffold0080 (3 HSPs)
scaffold0080 (6-128)||(11467-11589)
scaffold0080 (6-128)||(30838-30960)
scaffold0080 (6-128)||(36303-36426)
[»] scaffold0058 (2 HSPs)
scaffold0058 (6-128)||(21076-21198)
scaffold0058 (14-128)||(27484-27597)
[»] scaffold0018 (3 HSPs)
scaffold0018 (6-128)||(10969-11091)
scaffold0018 (6-128)||(17161-17283)
scaffold0018 (22-128)||(24542-24648)
[»] scaffold1715 (1 HSPs)
scaffold1715 (6-114)||(922-1030)
[»] scaffold0708 (1 HSPs)
scaffold0708 (6-114)||(6373-6481)
[»] scaffold0445 (1 HSPs)
scaffold0445 (4-128)||(2075-2199)
[»] scaffold0379 (1 HSPs)
scaffold0379 (6-128)||(6117-6239)
[»] scaffold0109 (2 HSPs)
scaffold0109 (6-128)||(40109-40231)
scaffold0109 (6-128)||(14353-14475)
[»] scaffold0060 (1 HSPs)
scaffold0060 (6-128)||(44739-44861)
[»] scaffold0037 (1 HSPs)
scaffold0037 (6-128)||(115209-115331)
[»] scaffold0117 (1 HSPs)
scaffold0117 (59-128)||(5974-6043)
[»] scaffold0100 (1 HSPs)
scaffold0100 (21-128)||(22428-22535)
[»] scaffold1985 (1 HSPs)
scaffold1985 (6-128)||(568-690)
[»] scaffold0501 (1 HSPs)
scaffold0501 (6-128)||(4150-4272)
[»] scaffold0282 (1 HSPs)
scaffold0282 (6-128)||(14707-14829)
[»] scaffold0114 (1 HSPs)
scaffold0114 (50-128)||(21842-21920)
[»] scaffold0083 (1 HSPs)
scaffold0083 (6-128)||(9262-9384)
[»] scaffold0081 (2 HSPs)
scaffold0081 (6-128)||(20558-20680)
scaffold0081 (6-128)||(35982-36104)
[»] scaffold0044 (2 HSPs)
scaffold0044 (6-128)||(16114-16236)
scaffold0044 (6-128)||(2376-2499)
[»] scaffold1602 (1 HSPs)
scaffold1602 (8-128)||(297-417)
[»] scaffold0342 (1 HSPs)
scaffold0342 (6-121)||(15449-15564)
[»] scaffold0040 (1 HSPs)
scaffold0040 (6-81)||(16880-16955)
[»] scaffold0682 (1 HSPs)
scaffold0682 (50-128)||(1839-1917)
[»] scaffold0647 (1 HSPs)
scaffold0647 (6-128)||(2855-2977)
[»] scaffold0454 (1 HSPs)
scaffold0454 (6-128)||(8894-9016)
[»] scaffold0256 (1 HSPs)
scaffold0256 (6-128)||(23302-23424)
[»] scaffold0206 (1 HSPs)
scaffold0206 (6-120)||(25077-25191)
[»] scaffold0138 (1 HSPs)
scaffold0138 (6-128)||(7315-7437)
[»] scaffold0056 (1 HSPs)
scaffold0056 (6-128)||(3581-3703)
[»] scaffold0012 (1 HSPs)
scaffold0012 (6-120)||(217648-217762)
[»] scaffold0007 (2 HSPs)
scaffold0007 (11-128)||(84752-84869)
scaffold0007 (50-128)||(268564-268642)
[»] scaffold2111 (1 HSPs)
scaffold2111 (8-128)||(817-937)
[»] scaffold0739 (1 HSPs)
scaffold0739 (6-128)||(1008-1130)
[»] scaffold0297 (1 HSPs)
scaffold0297 (6-128)||(7921-8043)
[»] scaffold0215 (2 HSPs)
scaffold0215 (6-128)||(28799-28921)
scaffold0215 (6-60)||(28691-28745)
[»] scaffold0017 (2 HSPs)
scaffold0017 (6-128)||(57971-58093)
scaffold0017 (6-121)||(195715-195830)
[»] scaffold0331 (1 HSPs)
scaffold0331 (15-116)||(16215-16315)
[»] scaffold0023 (1 HSPs)
scaffold0023 (29-128)||(86725-86824)
[»] scaffold0676 (1 HSPs)
scaffold0676 (14-128)||(7970-8084)
[»] scaffold0225 (1 HSPs)
scaffold0225 (8-90)||(25388-25470)
[»] scaffold0162 (1 HSPs)
scaffold0162 (8-90)||(14902-14984)
[»] scaffold0908 (1 HSPs)
scaffold0908 (8-128)||(1006-1126)
[»] scaffold0093 (1 HSPs)
scaffold0093 (36-128)||(35706-35798)
[»] scaffold0006 (1 HSPs)
scaffold0006 (8-128)||(103189-103309)
[»] scaffold0333 (1 HSPs)
scaffold0333 (6-128)||(17610-17732)
[»] scaffold0312 (1 HSPs)
scaffold0312 (6-128)||(15-137)
[»] scaffold0270 (2 HSPs)
scaffold0270 (6-120)||(5835-5949)
scaffold0270 (6-120)||(12965-13079)
[»] scaffold0148 (1 HSPs)
scaffold0148 (14-128)||(953-1067)
[»] scaffold0122 (1 HSPs)
scaffold0122 (6-128)||(38176-38298)
[»] scaffold0008 (2 HSPs)
scaffold0008 (6-128)||(85458-85580)
scaffold0008 (20-126)||(86038-86144)
[»] scaffold0285 (1 HSPs)
scaffold0285 (20-60)||(9249-9289)
[»] scaffold0084 (1 HSPs)
scaffold0084 (20-128)||(7177-7285)
[»] scaffold0022 (2 HSPs)
scaffold0022 (8-128)||(40588-40708)
scaffold0022 (8-128)||(74308-74428)


Alignment Details
Target: scaffold0079 (Bit Score: 99; Significance: 5e-49; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 2794 - 2672
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  2794 aagaagagcatgcagaacatctgaagattgtattgcaagtgttgaaagagaagaagttgtatgccaagttgtctaaatgtgagttctggttaagtgaagt 2695  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  2694 aagttttcttggccacattattt 2672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 35574 - 35451
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || || || || ||||||||| |||| |  || ||    
T  35574 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaggt 35475  T
Q  106 aa-gttttcttggccatattattt 128  Q
    || ||||| |||||||| ||||||    
T  35474 aaggttttgttggccatgttattt 35451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 5578 - 5697
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5578 aagaagagcatgcagaacatctgaagattgtgttgcaagtgttgaaagagaagaagttgtatgccaagttgtcaaaatgtgagttctggttaagtgaagt 5677  T
Q  106 aagttttcttggccatatta 125  Q
    ||||||||||||||| ||||    
T  5678 aagttttcttggccacatta 5697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 10009 - 10128
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10009 aagaagagcatgcagaacatctgaagattgtgttgcaagtgttgaaagagaagaagttgtatgccaagttgtcaaaatgtgagttctggttaagtgaagt 10108  T
Q  106 aagttttcttggccatatta 125  Q
    ||||||||||||||| ||||    
T  10109 aagttttcttggccacatta 10128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 21743 - 21865
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||||||||||||  | |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  21743 aagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaagaagttgtatgcgaagttgtcaaaatgtgagttctggttaagtgaagt 21842  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  21843 aagttttcttggccacattattt 21865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 13564 - 13686
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||||||||||||  | |||||||||||||||||||| || |||||||||||||||||| |||||||||||||    
T  13564 aagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaagaagttgtatgcaaaattgtcaaaatgtgagttctggttaagtgaagt 13663  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  13664 aagttttcttggccacattattt 13686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 19430 - 19308
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  19430 aagaggagcatgcagagcatctgaagattgtattgcaagtgttgaaagataagaagttgtatgccaagttgtcaaaatgtgaattctggttaagtgaagt 19331  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  19330 aagttttcttggccacattattt 19308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 49182 - 49060
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  49182 aagaagagcatgcagaacatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgagttctggttaagtcaagt 49083  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||| ||||    
T  49082 aagttttcttggccatatcattt 49060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 64736 - 64858
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||||||||| ||||||||| | ||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  64736 aagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaaaagaagaagttgtatgccaagttgtcaaaatgtgaattctggttaagtgaagt 64835  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  64836 aagttttcttggccacattattt 64858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 109708 - 109586
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||||||||||||  | ||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||    
T  109708 aagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaaatgcgagttctggttaagtgaagt 109609  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  109608 aagttttcttggccatattattt 109586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 55219 - 55341
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || || || || ||||||||| |||| |   | ||    
T  55219 aagaagaacatgctgagcatctgaagattgtcttgcaagtgtttaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaaaaaggt 55318  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  55319 aagttttcttggccatgttattt 55341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 50888 - 50766
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||| |||||||| |||  ||||||||||||    
T  50888 aagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaagataagaagttgtatgccaagttgtccaaatgtgaattcttgttaagtgaagt 50789  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  50788 aagttttcttggccatattattt 50766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 1e-46; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 23657040 - 23656918
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||||||||||||  | |||||||||||||||||||||||||||||||| ||||||||  |||||||||||||    
T  23657040 aagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaagaagttgtatgccaagttgtcaaagtgtgagttatggttaagtgaagt 23656941  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  23656940 aagttttcttggccatattattt 23656918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 21927541 - 21927418
Alignment:
Q  6 aagaagagcat-gcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaag 104  Q
    ||||||||||| |||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  21927541 aagaagagcattgcagagcatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgaattctggttaagtgaag 21927442  T
Q  105 taagttttcttggccatattattt 128  Q
    |||| |||||||||||||||||||    
T  21927441 taagatttcttggccatattattt 21927418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 20008589 - 20008711
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||||||| |||||||||| |||||| || | ||||| ||||||||||||||||||||||| |||||||| ||  |||||||||||||    
T  20008589 aagaagagcatgcagagcatatgaagattgtgttgcaactgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattttggttaagtgaagt 20008688  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  20008689 aagttttcttggccatattattt 20008711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 19861548 - 19861426
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||||||||||||||||||||  ||||||||| | ||| | ||||||||||||||||||||||| |||||||| ||  |||||||||||||    
T  19861548 aagaagaacatgcagagcatctgaagattgagttgcaagtgttgaaataaaagaagttgtatgccaagttgtccaaatgtgaattttggttaagtgaagt 19861449  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  19861448 aagttttcttggccatattattt 19861426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 31415137 - 31415248
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||| ||| ||||| |||||||||||||    
T  31415137 aagaggagcatgcagagcatctgaagattgtattgcaagtgttaaaagaaaagaagttgtatgctaagttgtcaaagtgtaagttctggttaagtgaagt 31415236  T
Q  106 aagttttcttgg 117  Q
     | |||||||||    
T  31415237 gaattttcttgg 31415248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 22052976 - 22052854
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| ||||||| ||||||||||||||| || |||||||| ||||||||||| |||||||  |||||||| ||| |||||||||||||    
T  22052976 aagaggagcatgcagaacatctgaggattgtattgcaagtactgaaagagaaaaagttgtatgctaagttgttgaaatgtgaattctggttaagtgaagt 22052877  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  22052876 gagttttcttggccacattattt 22052854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 27356649 - 27356527
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||||  ||||||||||||||  |||||||||||| ||||||||| |||||||| |||||||||||| |||||||||||||    
T  27356649 aagaggagcatgcagagcatctgagaattgtattgcaagttttaaaagagaagaggttgtatgcgaagttgtcgaaatgtgagttctggttaagtgaagt 27356550  T
Q  106 aagttttcttggccatattattt 128  Q
     || ||||| || ||||||||||    
T  27356549 gagctttctgggtcatattattt 27356527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 21323947 - 21324068
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||| |||||| |  | |||||||| ||||||||||| |||||||| || ||||||||| |||||||||||||    
T  21323947 aagaagagcatgcagaacatctgaagattgtgttgcaaattttgaaagagaa-aagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagt 21324045  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  21324046 gagttttcttggccacattattt 21324068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 22373044 - 22372922
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| |||||||||||||| |||||||| ||||||||| | ||||| ||||||||||||||||||| ||| |||||||| ||  ||||| |||||||    
T  22373044 aagaagaccatgcagagcatcttaagattgtgttgcaagtgttgaaagaaaagaagttgtatgccaagtggtccaaatgtgaattatggttacgtgaagt 22372945  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||| || |||||||    
T  22372944 aagttttcttggtcacattattt 22372922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 20390212 - 20390090
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||| |||||| | |||||||| ||||||||| | || || || |||||||||||||||||||| |||| ||| |||  |||||||||||     
T  20390212 aagaagagcatgcggagcatttaaagattgtgttgcaagtgttgaaggaaaaaaagttgtatgccaagttgtccaaatttgaattctagttaagtgaagc 20390113  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  20390112 aagttttcttggccatattattt 20390090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 20394801 - 20394923
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| |||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||| ||||| ||| |||| | | | ||    
T  20394801 aagaagaacatgccgagcatttgaagattgttttgcaagtgctgaaagagaaaaagttatatgccaagttgtcaaagtgtgaattctggttgaataaggt 20394900  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||||||||||    
T  20394901 gagttttcttggccatattattt 20394923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 29302102 - 29302208
Alignment:
Q  14 catgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttc 113  Q
    |||||||| ||  |||||||||| || |||||| | ||||||| |||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  29302102 catgcagaacacttgaagattgtgttacaagtgttgaaagagaggaagttgtatgccaagttgtcaaaatgtgaattctggttgagtgaagtaagttttc 29302201  T
Q  114 ttggcca 120  Q
    |||||||    
T  29302202 ttggcca 29302208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 16269892 - 16270014
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||| ||||  ||||||||||||||| | || || |||| ||||||||| ||||||||||||||||||||| |||||||||||||    
T  16269892 aagaggagcatgcagagcacctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgcaaagttgtcaaaatgtgagttctggttaagtgaagt 16269991  T
Q  106 aagttttcttggccatattattt 128  Q
     || ||||| || || |||||||    
T  16269992 gagctttctgggtcacattattt 16270014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 31569510 - 31569632
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||  |||||  |||||||  | ||||||||||||||||||||||| ||||| |||||||||||  || ||||||||||    
T  31569510 aagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggctaagtgaagt 31569609  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||| ||||||||||    
T  31569610 gagtttccttggtcatattattt 31569632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 4984153 - 4984033
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    ||||||||||||||||||||||  || |||||||||||| |||| ||||||   |||||||  ||||||||||||||||||||| ||||||||||||| |    
T  4984153 gaagagcatgcagagcatctgagaatagtattgcaagtgttaaaggagaagcgattgtatgttaagttgtcaaaatgtgagttctggttaagtgaagtga 4984054  T
Q  108 gttttcttggccatattattt 128  Q
    | ||||| || || |||||||    
T  4984053 gctttctgggtcacattattt 4984033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 6605766 - 6605649
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  ||||||||||| ||| | || || |||| ||||||||| ||||| ||||||||||||||| ||||||||||||| || |    
T  6605766 gagcatgcagagcatctgagaattgtattgcaggtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggttaagtgaagtgagct 6605667  T
Q  111 ttcttggccatattattt 128  Q
    |||| || || |||||||    
T  6605666 ttctgggtcacattattt 6605649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 23887123 - 23887015
Alignment:
Q  20 gagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcc 119  Q
    |||||| |||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| ||||| |||  ||| | ||| || |||||||||||||    
T  23887123 gagcatttgaagattgttttgcaagtgctgaaggagaagaagttatatgccaagttgtcaaagtgtgaattctagttgaatgaggtgagttttcttggcc 23887024  T
Q  120 atattattt 128  Q
    || ||||||    
T  23887023 atgttattt 23887015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 15535496 - 15535374
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  15535496 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 15535397  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  15535396 aagttttcttggccatgttattt 15535374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 21165206 - 21165328
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| |||||||||||||  | ||||| || || || || ||||||||| |||| |  || ||    
T  21165206 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttaaaagagaagaaactttatgctaaattatccaagtgtgagttctggttgaaagaggt 21165305  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  21165306 aagttttcttggccatgttattt 21165328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 22988843 - 22988721
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| |||||||||| ||||||||||| |||||||||||| | ||||| || |||||||| ||||| ||| |||| |  || ||    
T  22988843 aagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagctttatgctaaattgtcaaagtgtgaattctggttgaaagaggt 22988744  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  22988743 gagttttcttggccatgttattt 22988721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 30311812 - 30311934
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  30311812 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 30311911  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  30311912 aagttttcttggccatgttattt 30311934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 18858690 - 18858568
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  18858690 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 18858591  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  18858590 gagttttcttggccatgttattt 18858568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 19114803 - 19114681
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  19114803 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 19114704  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  19114703 gagttttctaggccatgttattt 19114681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 20016931 - 20017053
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | |||||||| ||||| || ||||| ||| |||| |  |||||    
T  20016931 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagt 20017030  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  20017031 gagttttctaggccatgttattt 20017053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 22131709 - 22131831
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| |||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  22131709 aagaagaacatgctgagcatttgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaggaagt 22131808  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  22131809 aagttttcttggccatgttattt 22131831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 28983019 - 28982913
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  || || ||||||||| | || || |||| ||||||||| ||||| ||| ||||||| ||| ||||| ||||||||||||    
T  28983019 gagcatgcagagcatctgagaatagtgttgcaagtgttgaaggaaaagaggttgtatgctaagttatcacaatgtgaattctggttacgtgaagtaagtt 28982920  T
Q  111 ttcttgg 117  Q
    |||||||    
T  28982919 ttcttgg 28982913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 28988238 - 28988132
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  || || ||||||||| | || || |||| ||||||||| ||||| ||| ||||||| ||| ||||| ||||||||||||    
T  28988238 gagcatgcagagcatctgagaatagtgttgcaagtgttgaaggaaaagaggttgtatgctaagttatcacaatgtgaattctggttacgtgaagtaagtt 28988139  T
Q  111 ttcttgg 117  Q
    |||||||    
T  28988138 ttcttgg 28988132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 22376121 - 22376196
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaa 81  Q
    ||||||| ||||| |||||| |||||||||| ||||||||||| |||||||||||||| ||||| || ||||||||    
T  22376121 aagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagttatatgctaaattgtcaaa 22376196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 32602258 - 32602135
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttc-cggttaagtgaag 104  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || |||||||| ||||| |||  |||| |  ||||    
T  32602258 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtcaaagtgtgaattcttggttgaaagaag 32602159  T
Q  105 taagttttcttggccatattattt 128  Q
    |||||||| |||||||| ||||||    
T  32602158 taagtttttttggccatgttattt 32602135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 17672691 - 17672813
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  17672691 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 17672790  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  17672791 gagttttctaggccatgttattt 17672813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 19482732 - 19482854
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| |||||||| |||||||||||||| || |||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  19482732 aagaagaacatgcagaacatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 19482831  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||| ||| ||||||    
T  19482832 gagttttcttggtcatgttattt 19482854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 19980080 - 19979958
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||| ||||||||||||| ||||||||| | ||||||||||| || ||||| || || || || | ||| ||| |||| |  || ||    
T  19980080 aagaagaacatgctgagaatctgaagattgtcttgcaagtgttgaaagagaagaaattttatgctaaattatctaagtatgatttctggttgaaagaggt 19979981  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  19979980 aagttttcttggccatgttattt 19979958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 14567250 - 14567133
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    ||||||||| |||| || || || || ||||||||| | || || ||||  |||||||| |||||||| |||||||||||| ||||||||||||| || |    
T  14567250 gagcatgcaaagcacctaaaaatagtgttgcaagtgttgaaggaaaagagattgtatgcaaagttgtcgaaatgtgagttctggttaagtgaagtgagct 14567151  T
Q  111 ttcttggccatattattt 128  Q
    |||| || || |||||||    
T  14567150 ttctgggtcacattattt 14567133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 16875765 - 16875847
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagtt 90  Q
    ||||||||||| |||||| ||| |||||| ||||||||  | ||||||||  |||||| |||||||||||| || ||||||||    
T  16875765 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtt 16875847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 22041940 - 22041818
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||| | | |||||||||||  | ||||| || || || || || || ||| |||| |  ||| |    
T  22041940 aagaagaacatgctgagcatctgaagattgtcttgcaagcgttgaaagagaagaaactttatgctaaattatctaagtgagaattctggttgaaagaaat 22041841  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  22041840 aagttttcttggccatgttattt 22041818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 22118843 - 22118965
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| | ||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||  |  || ||    
T  22118843 aagaagaacgtgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggtcgaaagaggt 22118942  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  22118943 gagttttctaggccatgttattt 22118965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 22127627 - 22127749
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| | ||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||  |  || ||    
T  22127627 aagaagaacgtgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggtcgaaagaggt 22127726  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  22127727 gagttttctaggccatgttattt 22127749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 21849007 - 21849116
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    ||||||||||| |||||| ||| |||||| ||||||||  | ||||||||  |||||| |||||||||||| || || |||||  |||| |  ||||| |    
T  21849007 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgggagttttggttgaaggaagtga 21849106  T
Q  108 gttttcttgg 117  Q
    ||||||||||    
T  21849107 gttttcttgg 21849116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 22247115 - 22247191
Alignment:
Q  20 gagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggtt 96  Q
    |||||| || ||||||| ||||||||||| |||||||||||||| ||||| || || ||||| ||||| ||| ||||    
T  22247115 gagcatttgtagattgttttgcaagtgctgaaagagaagaagttatatgctaaattttcaaagtgtgaattctggtt 22247191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 23652146 - 23652039
Alignment:
Q  14 catgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttc 113  Q
    ||||| |||||| |||||||||| || |||||| | |||||||||||| | ||||| || ||||| || ||||| ||  |||| |  || ||||||||||    
T  23652146 catgctgagcatttgaagattgttttacaagtgttgaaagagaagaagctatatgctaaattgtctaagtgtgaattttggttgaaagaggtaagttttc 23652047  T
Q  114 ttggccat 121  Q
    ||||||||    
T  23652046 ttggccat 23652039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 1e-46; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 25264732 - 25264610
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  25264732 aagaagagcatgcagaacatctgaagattgtcttgcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgagttctggttaagtgaagt 25264633  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  25264632 aagttttcttggccacattattt 25264610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 19650815 - 19650937
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||||||||||||||||||||  | ||||| |||||||||||||| |||||||||||||||||||||  ||||||||||||    
T  19650815 aagaggagcatgcagagcatctgaagattgtattgcaagttttgaaagaaaagaagttgtatgctaagttgtcaaaatgtgagttctagttaagtgaagt 19650914  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  19650915 aagttttcttggccacattattt 19650937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 23112414 - 23112292
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||||||| | |||||||| ||||||||| | || || ||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  23112414 aagaagagcatgcagagcatttaaagattgtgttgcaagtgttgaaggaaaagaagttgtatgccaagttgtccaaatgtgaattctggttaagtgaagt 23112315  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  23112314 aagttttcttggccatattattt 23112292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 31832331 - 31832214
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  ||||||||||||||| | || || |||| ||||||||| |||||||| |||||||||||| ||||||||||||||||||    
T  31832331 gagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgcaaagttgtcgaaatgtgagttctggttaagtgaagtaagtt 31832232  T
Q  111 ttcttggccatattattt 128  Q
    |||| || || |||||||    
T  31832231 ttctgggtcacattattt 31832214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 19717788 - 19717904
Alignment:
Q  12 agcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttt 111  Q
    |||||||||| |||||||||||||||||||||||  | ||||| |||||| ||||||| |||||||| || ||||||||| |||||||||||||||| ||    
T  19717788 agcatgcagaacatctgaagattgtattgcaagttttgaaagaaaagaagctgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtaagatt 19717887  T
Q  112 tcttggccatattattt 128  Q
    ||| ||||| |||||||    
T  19717888 tctaggccacattattt 19717904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 23098783 - 23098905
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||| |||||||||| ||||||||| || || || |||||||| | ||||||||| |||||||| |||||||| ||| |||||||||||||    
T  23098783 aagaagagcatgccgagcatctgaggattgtattacaggttctgaaagagaaaatgttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagt 23098882  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| ||||| |||||||    
T  23098883 gagttttctcggccacattattt 23098905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 23278454 - 23278332
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||| |||||| |  | |||||||| ||||||||||| |||||||| || || |||||| |||||||||||||    
T  23278454 aagaagagcatgcagaacatctgaagattgtgttgcaaatattgaaagagaaaaagttgtatgctaagttgtcgaagtgcgagttctggttaagtgaagt 23278355  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| ||||| |||||||    
T  23278354 gagttttctaggccacattattt 23278332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 23295613 - 23295491
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||| || |||||  | |||||||| ||||||||||| |||||||| || ||||||||| |||||| ||||||    
T  23295613 aagaagagcatgcagaacatctgaagattgtgttacaagttttgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaattgaagt 23295514  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| ||||| |||||||    
T  23295513 gagttttctgggccacattattt 23295491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 120
Target Start/End: Complemental strand, 24950268 - 24950154
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||| |||||| |  | |||||||| ||||||||||| |||||||| || ||||||||  |||||||||||||    
T  24950268 aagaagagcatgcagaacatctgaagattgtgttgcaaatattgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttatggttaagtgaagt 24950169  T
Q  106 aagttttcttggcca 120  Q
     ||| ||||||||||    
T  24950168 gagtcttcttggcca 24950154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 27789418 - 27789296
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||  |||||  |||||||  | ||||||||||||||||||||||| ||||| |||||||||||  || ||||||||||    
T  27789418 aagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggctaagtgaagt 27789319  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||| ||||||||||    
T  27789318 gagtttccttggtcatattattt 27789296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 21143806 - 21143928
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | |||||||| ||||| || ||||||||| |||| |  |||||    
T  21143806 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagt 21143905  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  21143906 gagttttcttggccatgttattt 21143928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 24818995 - 24819117
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| ||| |||||| ||||||||||| || ||||||||| | ||||| ||||||||||| |||||  || |||| | ||||||    
T  24818995 aagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaagaagctttatgctaagttgtcaaagtgtgaactctggttgaatgaagt 24819094  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  24819095 aagttttcttggccatgttattt 24819117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 24875515 - 24875637
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | |||||||| ||||| || ||||||||| |||| |  |||||    
T  24875515 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagt 24875614  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  24875615 gagttttcttggccatgttattt 24875637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 24706247 - 24706369
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || || || |||||||||||| |||| |  || ||    
T  24706247 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaaatgtgagttctggttgaaagaggt 24706346  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  24706347 aagttttcttggccatgttattt 24706369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 1065424 - 1065307
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  || || ||||||||| | || || |||| ||||||||| ||||| ||||||||||||||| | |||| |||||||||||    
T  1065424 gagcatgcagagcatctgagaatagtgttgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctgattaaatgaagtaagtt 1065325  T
Q  111 ttcttggccatattattt 128  Q
    |||| || || |||||||    
T  1065324 ttctgggtcacattattt 1065307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 12576031 - 12575909
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||  ||||| ||||||||  | ||||| | |||||||||||||||  |||| |||||||| ||  || ||||||||||    
T  12576031 aagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaagaaaggaagttgtatgccaaactgtcgaaatgtgaattttggctaagtgaagt 12575932  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||| ||||||||||    
T  12575931 gagtttccttggtcatattattt 12575909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 24677167 - 24677045
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| |||||||||||||  | ||||| || || || || ||||||||| |||| |  || ||    
T  24677167 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttaaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaggt 24677068  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||| |||||| ||||||    
T  24677067 aagttttctgggccatgttattt 24677045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 24711712 - 24711590
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  24711712 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 24711613  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  24711612 gagttttctaggccatgttattt 24711590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 27372947 - 27372825
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  27372947 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 27372848  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  27372847 gagttttctaggccatgttattt 27372825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 41607150 - 41607272
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  41607150 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 41607249  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  41607250 gagttttctaggccatgttattt 41607272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 22323621 - 22323736
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  22323621 aagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 22323720  T
Q  106 aagttttcttggccat 121  Q
     |||||||| ||||||    
T  22323721 gagttttctaggccat 22323736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 27208944 - 27209051
Alignment:
Q  13 gcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtttt 112  Q
    |||||||||||| ||||||||||| |||||  |  | |||||||  |||||||||||||| ||||| || || |||||| ||||||||||||| ||||||    
T  27208944 gcatgcagagcacctgaagattgtgttgcagattttgaaagagagaaagttgtatgccaacttgtcgaagtgcgagttctggttaagtgaagtgagtttt 27209043  T
Q  113 cttggcca 120  Q
    || |||||    
T  27209044 ctaggcca 27209051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 9485894 - 9485772
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  9485894 aagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 9485795  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  9485794 gagttttctaggccatgttattt 9485772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 27219694 - 27219572
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  27219694 aagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 27219595  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  27219594 gagttttctaggccatgttattt 27219572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 24264034 - 24263926
Alignment:
Q  20 gagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcc 119  Q
    ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  ||||| |||||||| ||||    
T  24264034 gagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggcc 24263935  T
Q  120 atattattt 128  Q
    || ||||||    
T  24263934 atgttattt 24263926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 10870528 - 10870406
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  10870528 aagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgcgaaattgtctaagtgtgaattctggttgaaagaagt 10870429  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  10870428 gagttttctaggccatgttattt 10870406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 16927038 - 16926916
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  || ||    
T  16927038 aagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaggt 16926939  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||||||| ||||||    
T  16926938 gagtttccttggccatgttattt 16926916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 17000678 - 17000556
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  || ||    
T  17000678 aagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaggt 17000579  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||||||| ||||||    
T  17000578 gagtttccttggccatgttattt 17000556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 44384335 - 44384457
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  44384335 aagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 44384434  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  44384435 gagttttctaggccatgttattt 44384457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 45534610 - 45534496
Alignment:
Q  14 catgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttc 113  Q
    ||||| |||||| |||  ||||| ||||||||||| |||||||||||||| ||||||||||| || || || || ||| |||| |  ||||| |||||||    
T  45534610 catgccgagcatttgagaattgttttgcaagtgctgaaagagaagaagttatatgccaagttatcgaagtgcgaattctggttgaacgaagtgagttttc 45534511  T
Q  114 ttggccatattattt 128  Q
    | || ||||||||||    
T  45534510 tcggtcatattattt 45534496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 21324031 - 21324146
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | || ||||||||  | ||||| ||  | || || ||||||||| |||| |  || ||    
T  21324031 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaggagaagaaactttatgctaaactatctaagtgtgagttctggttgaaagaggt 21324130  T
Q  106 aagttttcttggccat 121  Q
    ||||||||||||||||    
T  21324131 aagttttcttggccat 21324146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 23189594 - 23189475
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    ||||| ||||| ||||||||||||||||| || |||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |   ||||||    
T  23189594 gaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtga-ttctggttgaagaaagtaa 23189496  T
Q  108 gttttcttggccatattattt 128  Q
    ||||||| |||||| ||||||    
T  23189495 gttttctgggccatgttattt 23189475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 9337260 - 9337205
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaag 61  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | ||||||||||||    
T  9337260 aagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaag 9337205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 24829955 - 24830037
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagtt 90  Q
    ||||||||||| |||||| ||| |||||| |||||| |  | ||||||||  |||||| |||||||||||| || ||||||||    
T  24829955 gaagagcatgcggagcatttgaggattgtgttgcaattcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtt 24830037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 30010975 - 30011071
Alignment:
Q  32 attgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 128  Q
    ||||| |||||||||||  ||||||||||||| ||||||||||| || |  || || ||| |||| |  ||||| |||||||| || ||||||||||    
T  30010975 attgttttgcaagtgctgcaagagaagaagttatatgccaagttatcgatgtgcgaattctggttgaacgaagtgagttttctcggtcatattattt 30011071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 1e-46; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 21743849 - 21743971
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  21743849 aagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgagttctggttaagtgaagt 21743948  T
Q  106 aagttttcttggccatattattt 128  Q
    |||| |||||||||| |||||||    
T  21743949 aagtcttcttggccacattattt 21743971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 41308735 - 41308613
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||| |||||||| ||  |||||||||||||    
T  41308735 aagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattttggttaagtgaagt 41308636  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  41308635 aagttttcttggccatattattt 41308613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 19661433 - 19661555
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||| || ||||||||| |||||||||||||    
T  19661433 aagaagagcatgcatagcatctgaagattgtattgtaagtgttaaaagaaaagaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagt 19661532  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||| |||||| |||||||    
T  19661533 gagttttcctggccacattattt 19661555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 23196546 - 23196668
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||| |||||||||||| ||||| ||||||||| | ||||| |||| |||||||||||||||||| ||||| |||||| |||||||||||||    
T  23196546 aagaagagcatgtagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaggttgtatgccaagttgtccaaatgcgagttctggttaagtgaagt 23196645  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  23196646 aagttttcttggccacattattt 23196668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 19856367 - 19856245
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||| ||| ||||||||||| ||||||||| |  ||||||| |||||||||||||| ||||||||||| |||||||||  ||||||||||||    
T  19856367 aagaagagcatgaagaacatctgaagatagtattgcaaatattaaaagaaaagaagttgtatgctaagttgtcaaagtgtgagttctagttaagtgaagt 19856268  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| |||||||| |||||||    
T  19856267 gagtttccttggccacattattt 19856245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 20938360 - 20938482
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||| |||||||||||  || ||||| |||||  | |||||||| ||||||||||| |||||||| || ||||||||| |||||| ||||||    
T  20938360 aagaagagcatgtagagcatctgagaatagtattacaagtattgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaattgaagt 20938459  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  20938460 aagttttcttggccacattattt 20938482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 24097900 - 24098022
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||  ||||||||||||||||| ||||  | ||||| |||||||||||||| ||||||||||| ||||||||| |||||||||||||    
T  24097900 aagaggagcatgcagaaaatctgaagattgtattgtaagtcttgaaagaaaagaagttgtatgctaagttgtcaaagtgtgagttctggttaagtgaagt 24097999  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| || || |||||||    
T  24098000 gagttttctgggtcacattattt 24098022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 31538299 - 31538416
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  ||||||||||||||| | || || |||| ||||||||| ||||| ||||||||||||||| |||||| |||||||||||    
T  31538299 gagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagtt 31538398  T
Q  111 ttcttggccatattattt 128  Q
    |||| || || |||||||    
T  31538399 ttctgggtcacattattt 31538416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 48424961 - 48424844
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  ||||||||||||||| | || || |||| ||||||||| ||||| ||||||||||||||| |||||| |||||||||||    
T  48424961 gagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagtt 48424862  T
Q  111 ttcttggccatattattt 128  Q
    |||| || || |||||||    
T  48424861 ttctgggtcacattattt 48424844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 52987829 - 52987712
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  ||||||||||||||| | || || |||| ||||||||| ||||| ||||||||||||||| |||||| |||||||||||    
T  52987829 gagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagtt 52987730  T
Q  111 ttcttggccatattattt 128  Q
    |||| || || |||||||    
T  52987729 ttctgggtcacattattt 52987712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 21952971 - 21952849
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||||  ||||||||||||||  | ||||| |||| ||||||||| ||||||||||||||||||||| ||||||| |||||    
T  21952971 aagaggagcatgcagagcatctgagaattgtattgcaagttttgaaagaaaagaggttgtatgcgaagttgtcaaaatgtgagttctggttaagcgaagt 21952872  T
Q  106 aagttttcttggccatattattt 128  Q
     || ||||| || || |||||||    
T  21952871 gagctttctgggtcacattattt 21952849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 38911128 - 38911245
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  ||||||||||||||| | || || |||| ||||||||| ||| |||| |||||||||||| ||||||||||||| || |    
T  38911128 gagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagctgtcgaaatgtgagttctggttaagtgaagtgagct 38911227  T
Q  111 ttcttggccatattattt 128  Q
    |||| || ||||||||||    
T  38911228 ttctgggtcatattattt 38911245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 20296474 - 20296352
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||||||||| |  ||||||||||||||| | || || ||||  |||||||| ||||||||||||||||||||| |||||||||||||    
T  20296474 aagaggagcatgcagagcatctaagaattgtattgcaagtgttgaaggaaaagagattgtatgcaaagttgtcaaaatgtgagttctggttaagtgaagt 20296375  T
Q  106 aagttttcttggccatattattt 128  Q
     || ||||| || || |||||||    
T  20296374 gagctttctgggtcacattattt 20296352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 37679136 - 37679036
Alignment:
Q  12 agcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttt 111  Q
    ||||||||||||||||||  ||||||||||||||| | || || |||| ||||||||| ||||| ||||||||||| ||| ||||| |||||||||||||    
T  37679136 agcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgaattctggttaggtgaagtaagttt 37679037  T
Q  112 t 112  Q
    |    
T  37679036 t 37679036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 20834197 - 20834319
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| |||||||| ||| |||||||||| |||||| |  | |||||||| | ||||||||| |||||||| || ||||||||| ||||| ||||||     
T  20834197 aagaagaacatgcagaacatttgaagattgtgttgcaaattttgaaagagaaaaggttgtatgctaagttgtcgaagtgtgagttctggttatgtgaagc 20834296  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  20834297 gagttttcttggccacattattt 20834319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 51331790 - 51331912
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||||| ||||| || ||||| || ||||| ||| |||| |  |||||    
T  51331790 aagaagaacatgcggagcatctgaagattgttttgcaagtgttgaaagagaagaagttttatgctaaattgtctaagtgtgaattctggttgaaagaagt 51331889  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  51331890 gagttttctaggccatgttattt 51331912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 19108427 - 19108308
Alignment:
Q  9 aagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaag 108  Q
    |||| ||||| ||||||||||||||||| || |||||| | |||||||||||  | |||||||| ||||| || ||||||||| |||| |  ||||| ||    
T  19108427 aagaacatgctgagcatctgaagattgtcttccaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagtgag 19108328  T
Q  109 ttttcttggccatattattt 128  Q
    ||||||||||||| ||||||    
T  19108327 ttttcttggccatgttattt 19108308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 17043312 - 17043434
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| |||||||||| ||||||||  | |||||||||||  | ||||| || |||||||| ||||| ||| |||| |  |||||    
T  17043312 aagaagaacatgctgagcatatgaagattgtcttgcaagtattgaaagagaagaaactttatgctaaattgtcaaagtgtgaattctggttgaaagaagt 17043411  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  17043412 aagttttcttggccatgttattt 17043434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 21234028 - 21234150
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| || |||||||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  21234028 aagaagaacatgctgaacatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 21234127  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  21234128 aagttttcttggccatgttattt 21234150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 33389326 - 33389448
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  33389326 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 33389425  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  33389426 gagttttctaggccatgttattt 33389448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 20855057 - 20855179
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| ||  |||||||||| |||||  |  | || ||||  |||||||||||||||||||| || || |||||| |||||||||||||    
T  20855057 aagaggagcatgcagaacacttgaagattgtgttgcagattttgaaggagagaaagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagt 20855156  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  20855157 gagttttctaggccatgttattt 20855179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 21832364 - 21832242
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  21832364 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 21832265  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  21832264 gagttttctaggccatgttattt 21832242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 21839012 - 21838890
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  21839012 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 21838913  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  21838912 gagttttctaggccatgttattt 21838890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 24792913 - 24793035
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||  ||||||||||||||||| ||||||||| | ||||| |||||  | ||||| || || || || ||||||||| |||| |  |||||    
T  24792913 aagaagaacatgttgagcatctgaagattgtcttgcaagtgttgaaagaaaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaagt 24793012  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  24793013 aagttttcttggccatgttattt 24793035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 22503586 - 22503701
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||  ||||||||||||||||| ||||||||| |||||||||||||  | ||||| ||  | || || ||||||||| |||| |  || ||    
T  22503586 aagaagaacatgttgagcatctgaagattgtcttgcaagtgttaaaagagaagaaactttatgctaaaatatctaagtgtgagttctggttgaaagaggt 22503685  T
Q  106 aagttttcttggccat 121  Q
    ||||||||||||||||    
T  22503686 aagttttcttggccat 22503701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 16348893 - 16349015
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||||||||||||||||||||| || |||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  16348893 aagaagaacatgcagagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 16348992  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| || ||| ||||||    
T  16348993 gagttttctaggtcatgttattt 16349015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 21026235 - 21026113
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| ||  | || || ||||||||| |||| |  |||||    
T  21026235 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaaatatctaagtgtgagttctggttgaaagaagt 21026136  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||| |||||||| ||||||    
T  21026135 gagtttttttggccatgttattt 21026113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 41351959 - 41352081
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| |||||||| |||||||||||||| || |||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  41351959 aagaagaacatgcagaacatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 41352058  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||| ||| ||||||    
T  41352059 gagttttcttggtcatgttattt 41352081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 20829691 - 20829773
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagtt 90  Q
    ||||||||||| |||||| ||| |||||| ||||||||  | ||||||||  |||||| |||||||||||| || ||||||||    
T  20829691 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtt 20829773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 430413 - 430535
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| ||||| | || ||||||||| | |||||||||||| | ||||| || || || || ||||| ||| ||||||  |||||    
T  430413 aagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattatctaagtgtgaattctggttaaaagaagt 430512  T
Q  106 aagttttcttggccatattattt 128  Q
     || |||||||| ||| ||||||    
T  430513 gagctttcttgggcatgttattt 430535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 21862672 - 21862792
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    ||||| ||||| |||||| ||||||| || ||||||||| | |||||||||||| | ||||| || || || || ||||| ||| |||| |  || || |    
T  21862672 gaagaacatgctgagcatttgaagatggttttgcaagtgttcaaagagaagaagctttatgctaaattatctaagtgtgaattctggttgaaagaggtga 21862771  T
Q  108 gttttcttggccatattattt 128  Q
    |||||||||| ||| ||||||    
T  21862772 gttttcttggacatgttattt 21862792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 11871 - 11749
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||| |||||||| ||| |||| |||||| |    
T  11871 aagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggttgagtgaatt 11772  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  11771 aagttttcttggccatattattt 11749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 1713 - 1835
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||  ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  1713 aagaagagcatgcagaagatctgaagattgtattgcaagtgttgaaagagaagaagttgtatgccaagttgtcaaaatgtgagttctggttaaatgaagt 1812  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  1813 tagttttcttggccacattattt 1835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 10285 - 10407
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||||||||||||  | ||||| ||||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  10285 aagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagaaaagaagttgtatgtcaagttgtcaaagtgtgagttctggttaagtgaagt 10384  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  10385 aagttttcttggccatattattt 10407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 16190 - 16068
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||||||||||||||||||| | || || |||| ||||||||||||||||||||||||||| ||  |||||||||||||    
T  16190 aagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaggaaaagaggttgtatgccaagttgtcaaaatgtgaattttggttaagtgaagt 16091  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  16090 aagttttcttggccatattattt 16068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 50103 - 50225
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||||||||| || |||||| | ||||| |||||||||||||||||||||||||||||||| |||  ||||||||||||    
T  50103 aagaagagcatgcagagcatctgaagattgtgtttcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgaattcttgttaagtgaagt 50202  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  50203 aagttttcttggccatattattt 50225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 3e-44; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 14262456 - 14262578
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||||||| | ||||||||| | ||||| |||||||||||||||||||||||||||||||| ||  |||||||||||||    
T  14262456 aagaagagcatgcagagcatctgaagattatgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgaattttggttaagtgaagt 14262555  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  14262556 aagttttcttggccatattattt 14262578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 15100815 - 15100937
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| ||||||||||| || ||||||||| | ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15100815 aagaagagcatgcagaacatctgaagatcgtcttgcaagtgttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgagttctggttaagtgaagt 15100914  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  15100915 aagttttcttggccacattattt 15100937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 16070507 - 16070629
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||| ||||||||||||||||||||||| | ||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  16070507 aagaagagcatgcagagtatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgagttctggttaagtgaagt 16070606  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||| || ||||||||||    
T  16070607 aagttttctgggtcatattattt 16070629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 12205012 - 12205134
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  12205012 aagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggttaagtgaagt 12205111  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  12205112 aagttttcttggccacattattt 12205134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 19149246 - 19149126
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    ||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||||| || ||||||||| |||||||| ||| |||||||||||||||    
T  19149246 gaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaagaaaagaagttgtgtgtcaagttgtccaaatgtgaattctggttaagtgaagtaa 19149147  T
Q  108 gttttcttggccatattattt 128  Q
    |||||||||||||||||||||    
T  19149146 gttttcttggccatattattt 19149126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 20748645 - 20748525
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    ||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||||| || ||||||||| |||||||| ||| |||||||||||||||    
T  20748645 gaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaagaaaagaagttgtgtgtcaagttgtccaaatgtgaattctggttaagtgaagtaa 20748546  T
Q  108 gttttcttggccatattattt 128  Q
    |||||||||||||||||||||    
T  20748545 gttttcttggccatattattt 20748525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 19614710 - 19614590
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    |||||||||||||| ||||||| |||||||||||||||  | ||||||||||||||||||||||| |||||||| || |||||  ||||||||||||| |    
T  19614710 gaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggttaagtgaagtga 19614611  T
Q  108 gttttcttggccatattattt 128  Q
    |||||||||||||||||||||    
T  19614610 gttttcttggccatattattt 19614590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 13675489 - 13675367
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||||||||||||||||||  | || ||||| ||||||||||| |||||||| || ||||||||| |||||||||||||    
T  13675489 aagaagagcatgcagagcatctgaagattgtattgcaagtattgaatgagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagt 13675390  T
Q  106 aagttttcttggccatattattt 128  Q
     |||| ||||||||| |||||||    
T  13675389 gagttatcttggccacattattt 13675367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 15342468 - 15342346
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| ||||||| ||||||||||||||| || |||||||| ||||||||||| |||||||| |||||||| ||| |||||||||||||    
T  15342468 aagaggagcatgcagaacatctgaggattgtattgcaagtactgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagt 15342369  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  15342368 gagttttcttggccacattattt 15342346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 11386641 - 11386763
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||| |||||||||| ||||||||| || || || |||||||| ||||||||||| |||||||| |||||||| ||| |||||||||||||    
T  11386641 aagaagagcatgccgagcatctgaggattgtattacaggttctgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagt 11386740  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| ||||| |||||||    
T  11386741 gagttttctcggccacattattt 11386763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 12458677 - 12458555
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||||  ||||||||||||||  | ||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  12458677 aagaggagcatgcagagcatctgagaattgtattgcaagttttgaaagaaaagaagttgtatgcaaagttgtcaaaatgtgagttctggttaagtgaagt 12458578  T
Q  106 aagttttcttggccatattattt 128  Q
     || ||||| || || |||||||    
T  12458577 gagatttctgggacacattattt 12458555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 13023394 - 13023272
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| |||||||  ||||||||||||||  | ||||| |||||||||||||||||||||||||||||||||||  |||||||||||||    
T  13023394 aagaggagcatgcagaacatctgagaattgtattgcaagttttgaaagaaaagaagttgtatgccaagttgtcaaaatgtgagttgtggttaagtgaagt 13023295  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| || || |||||||    
T  13023294 gagttttctgggtcacattattt 13023272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 14139716 - 14139594
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||  ||||| ||||||||  | ||||| ||||||||||||||||| |||||||||||||||||  || ||||||||||    
T  14139716 aagaagagcatgcagaacatctgagaattgtgttgcaagtattgaaagaaaagaagttgtatgccaaattgtcaaaatgtgagttttggctaagtgaagt 14139617  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||| ||||| ||||||||||    
T  14139616 aagtttccttggtcatattattt 14139594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 13966880 - 13967002
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||||  ||||| ||||||||  | |||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||    
T  13966880 aagaggagcatgcagagcatctgagaattgtcttgcaagttttgaaagagaagaggttgtatgctaagttgtcaaaatgtgagttctggttaagtgaagt 13966979  T
Q  106 aagttttcttggccatattattt 128  Q
     || ||||| || || |||||||    
T  13966980 gagctttctgggtcacattattt 13967002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 14284588 - 14284710
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||| |||| ||||||| |||| ||||||||||  | |||||||||||| ||||||| |||||||| ||||||||||||  ||||||||||||    
T  14284588 aagaggagcatacagaacatctgaggattatattgcaagtattgaaagagaagaagctgtatgctaagttgtcgaaatgtgagttctagttaagtgaagt 14284687  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  14284688 gagttttcttggccacattattt 14284710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 16948684 - 16948806
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||| |||||||||||||||||||| ||||||||  | ||||| |||||||||||||| ||| ||||||| ||||||||  |||||||||||||    
T  16948684 aagaggagcacgcagagcatctgaagattgtgttgcaagtcttgaaagaaaagaagttgtatgctaagctgtcaaagtgtgagttttggttaagtgaagt 16948783  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| ||||| |||||||    
T  16948784 gagttttctgggccacattattt 16948806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 26093015 - 26093132
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  ||||||||||||||| | || || |||| ||||||||| ||||| ||||||||||||||| |||||| |||||||||||    
T  26093015 gagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagtt 26093114  T
Q  111 ttcttggccatattattt 128  Q
    |||| || || |||||||    
T  26093115 ttctgggtcacattattt 26093132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 49154333 - 49154216
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  ||||||||||||||| | || || |||| ||||||||| ||||| ||||||||||||||| |||||| |||||||||||    
T  49154333 gagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagtt 49154234  T
Q  111 ttcttggccatattattt 128  Q
    |||| || || |||||||    
T  49154233 ttctgggtcacattattt 49154216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 12689538 - 12689416
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | |||||||| ||||| || ||||||||| |||| |  |||||    
T  12689538 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagt 12689439  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  12689438 gagttttcttggccatgttattt 12689416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 15626561 - 15626439
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||  ||| || |||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||| |||| | ||| ||    
T  15626561 aagaagaacatgtcgagtatttgaagattgttttgcaagtgctgaaagagaagaagttatatgctaagttgtcaaagtgtgaattctggttgaatgaggt 15626462  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||||||||||||||    
T  15626461 gagtttccttggccatattattt 15626439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 48813486 - 48813607
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| |||||||||| ||||||||||| || ||||||||||| |||||||| |||||||| ||||| ||| |||| | ||| ||    
T  48813486 aagaagaacatgctgagcatttgaagattgtgttgcaagtgctgaaggagaagaagttatatgccaa-ttgtcaaagtgtgaattctggttgaatgaggt 48813584  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  48813585 gagttttcttggccatgttattt 48813607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 11301430 - 11301547
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  || || ||||||||| | || || |||| ||||||||| |||||||||||||||||| || |||||| |||||||||||    
T  11301430 gagcatgcagagcatctgagaatagtgttgcaagtgttgaaggaaaagaggttgtatgctaagttgtcaaaatgtgagatctggttaaatgaagtaagtt 11301529  T
Q  111 ttcttggccatattattt 128  Q
    |||| || || |||||||    
T  11301530 ttctgggtcacattattt 11301547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 26116807 - 26116924
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  ||||| ||||||||| | || || |||| ||||||||| |||||||| |||||||||||| ||||||||||||| || |    
T  26116807 gagcatgcagagcatctgagaattgtgttgcaagtgttgaaggaaaagaggttgtatgcaaagttgtcgaaatgtgagttctggttaagtgaagtgagct 26116906  T
Q  111 ttcttggccatattattt 128  Q
    |||| || || |||||||    
T  26116907 ttctgggtcacattattt 26116924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 18052165 - 18052287
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||  ||||| ||||||||  | ||||| | |||||||||||||||  |||| |||||||||||  || ||||||||||    
T  18052165 aagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaagaaaggaagttgtatgccaaactgtcgaaatgtgagttttggctaagtgaagt 18052264  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||| ||||||||||    
T  18052265 gagtttccttggtcatattattt 18052287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 23504082 - 23504204
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||  ||||| ||||||||  | ||||| | |||||||||||||||  |||| |||||||||||  || ||||||||||    
T  23504082 aagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaagaaaggaagttgtatgccaaactgtcgaaatgtgagttttggctaagtgaagt 23504181  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||| ||||||||||    
T  23504182 gagtttccttggtcatattattt 23504204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 15584 - 15706
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||||||| |||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  15584 aagaagaacatgctgagcatctgatgattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaggaagt 15683  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  15684 aagttttcttggccatgttattt 15706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 8709641 - 8709519
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  8709641 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 8709542  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  8709541 gagttttctaggccatgttattt 8709519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 11235447 - 11235569
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  11235447 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 11235546  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  11235547 gagttttctaggccatgttattt 11235569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 11551336 - 11551458
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||  ||||||||||||||||| ||||||||| | |||||||||||  | |||||||| ||||| || ||||| ||| |||| |  |||||    
T  11551336 aagaagaacatgttgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagt 11551435  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  11551436 gagttttcttggccatgttattt 11551458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 14334432 - 14334310
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | |||||||| ||||| || ||||| ||| |||| |  |||||    
T  14334432 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagt 14334333  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  14334332 gagttttctaggccatgttattt 14334310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 14956590 - 14956468
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||  |||| ||||||||||||||||| ||||||||| | |||||||||||  | |||||||| ||||| || ||||| ||| |||| |  |||||    
T  14956590 aagaagaagatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagt 14956491  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  14956490 gagttttcttggccatgttattt 14956468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 15147119 - 15147241
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| |||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||||||| |||| |  || ||    
T  15147119 aagaagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaaactttatgcaaaattgtctaagtgtgagttctggttgaaagaggt 15147218  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  15147219 aagttttcttggccatgttattt 15147241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 15159293 - 15159413
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    ||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  ||||| |    
T  15159293 gaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtga 15159392  T
Q  108 gttttcttggccatattattt 128  Q
    ||||||| |||||| ||||||    
T  15159393 gttttctaggccatgttattt 15159413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 11770483 - 11770597
Alignment:
Q  14 catgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttc 113  Q
    ||||| |||||| |||||||||| ||||||||| | |||||||||||||| ||||  || ||||| || ||||| ||| |||| |  || ||||||||||    
T  11770483 catgctgagcatttgaagattgttttgcaagtgttgaaagagaagaagttatatgttaaattgtctaagtgtgaattctggttgaaagaggtaagttttc 11770582  T
Q  114 ttggccatattattt 128  Q
    |||||||| ||||||    
T  11770583 ttggccatgttattt 11770597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 44789585 - 44789707
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  || ||    
T  44789585 aagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaggt 44789684  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||||||| ||||||    
T  44789685 gagtttccttggccatgttattt 44789707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 7825934 - 7825852
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagtt 90  Q
    ||||||||||| |||||| ||| |||||| ||||||||  | ||||||||  |||||| |||||||||||| || ||||||||    
T  7825934 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtt 7825852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 10872726 - 10872604
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | |||||||||||  | ||| | || ||||| || ||||| ||| |||| |  |||||    
T  10872726 aagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatcctaaattgtctaagtgtgaattctggttgaaagaagt 10872627  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  10872626 gagttttctaggccatgttattt 10872604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 13688075 - 13688021
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagt 62  Q
    ||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||||    
T  13688075 gaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagt 13688021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 128
Target Start/End: Complemental strand, 14213678 - 14213588
Alignment:
Q  38 ttgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 128  Q
    ||||||||| | |||||||||||  | ||||| || |||||||| ||||| ||| |||| |  ||||||||||||||||||||| ||||||    
T  14213678 ttgcaagtgttgaaagagaagaaactttatgctaaattgtcaaagtgtgaattctggttgaaagaagtaagttttcttggccatgttattt 14213588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 27106010 - 27106092
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagtt 90  Q
    ||||||||||| |||||| ||| |||||| ||||||||  | ||||||||  |||||| |||||||||||| || ||||||||    
T  27106010 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtt 27106092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 27172315 - 27172233
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagtt 90  Q
    ||||||||||| |||||| ||| |||||| ||||||||  | ||||||||  |||||| |||||||||||| || ||||||||    
T  27172315 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtt 27172233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 3e-44; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 22234327 - 22234449
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||||||||||||| | ||||| ||||||||||||| |||||| ||||||||||| ||| |||||||||||||    
T  22234327 aagaagagcatgcagatcatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgtcaagttatcaaaatgtgaattctggttaagtgaagt 22234426  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  22234427 aagttttcttggccatattattt 22234449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 24618702 - 24618823
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||||| |||| |||||||||||||||||| ||||| |||||| |||||||||||||    
T  24618702 aagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaggttgtatgccaagttgtccaaatgcgagttctggttaagtgaagt 24618801  T
Q  106 aagttttcttggccatattatt 127  Q
    ||||||||| ||||||||||||    
T  24618802 aagttttctgggccatattatt 24618823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 24714933 - 24715054
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||||| |||| |||||||||||||||||| ||||| |||||| |||||||||||||    
T  24714933 aagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaggttgtatgccaagttgtccaaatgcgagttctggttaagtgaagt 24715032  T
Q  106 aagttttcttggccatattatt 127  Q
    ||||||||| ||||||||||||    
T  24715033 aagttttctgggccatattatt 24715054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 24747961 - 24748082
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||||| |||| |||||||||||||||||| ||||| |||||| |||||||||||||    
T  24747961 aagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaggttgtatgccaagttgtccaaatgcgagttctggttaagtgaagt 24748060  T
Q  106 aagttttcttggccatattatt 127  Q
    ||||||||| ||||||||||||    
T  24748061 aagttttctgggccatattatt 24748082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 21679187 - 21679307
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    |||||||||||||| |||| || |||||||||||||||  | ||||||||||||||||||||||| |||||||| || |||||  ||||||||||||| |    
T  21679187 gaagagcatgcagaacatccgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggttaagtgaagtga 21679286  T
Q  108 gttttcttggccatattattt 128  Q
    |||||||||||||||||||||    
T  21679287 gttttcttggccatattattt 21679307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 22504640 - 22504518
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||||  ||||||||||||||  | |||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||    
T  22504640 aagaggagcatgcagagcatctgagaattgtattgcaagttttgaaagagaagaggttgtatgcaaagttgtcaaaatgtgagttctggttaagtgaagt 22504541  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| || || |||||||    
T  22504540 gagttttctgggtcacattattt 22504518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 20344243 - 20344121
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||||  ||||| ||||||||  | |||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||    
T  20344243 aagaggagcatgcagagcatctgagaattgtcttgcaagttttgaaagagaagaggttgtatgctaagttgtcaaaatgtgagttctggttaagtgaagt 20344144  T
Q  106 aagttttcttggccatattattt 128  Q
     || ||||| || || |||||||    
T  20344143 gagctttctgggtcacattattt 20344121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 20466506 - 20466628
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||  |||||| |||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| ||||||||| |||| | ||| ||    
T  20466506 aagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaagaagttatatgccaagttgtcaaagtgtgagttctggttgaatgaggt 20466605  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  20466606 gagttttcttggccatgttattt 20466628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 25850036 - 25849914
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||||  || |||||||||||| | || || |||| ||||||||| |||||||| |||||||||||| |||||||||||||    
T  25850036 aagaggagcatgcagagcatctgagaatagtattgcaagtgttgaaggaaaagaggttgtatgcaaagttgtcgaaatgtgagttctggttaagtgaagt 25849937  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| || || |||||||    
T  25849936 gagttttctgggtcacattattt 25849914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 17267741 - 17267863
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| || ||||  ||||| ||||||||| | ||||| ||||||||||||||||| ||||| |||||| ||||  || ||||||||||    
T  17267741 aagaagagcatgcagaacacctgagaattgtgttgcaagtgttgaaagaaaagaagttgtatgccaaattgtcgaaatgtaagttttggctaagtgaagt 17267840  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||| ||||||||||    
T  17267841 gagtttccttggtcatattattt 17267863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 22349898 - 22349776
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | |||||||| ||||| || ||||||||| |||| |  |||||    
T  22349898 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagt 22349799  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  22349798 gagttttcttggccatgttattt 22349776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 41772821 - 41772699
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | ||||||||||| || ||||| || ||||| |||||||| ||| |||| |  |||||    
T  41772821 aagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaatttttatgctaaattgtctaaatgtgaattctggttgaaagaagt 41772722  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  41772721 gagttttctaggccatgttattt 41772699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 14885409 - 14885520
Alignment:
Q  17 gcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttg 116  Q
    |||||||||||||  || || ||||||||| | || || |||| ||||||||| ||||||||||||||||||||| |||||| |||||||||||| || |    
T  14885409 gcagagcatctgagaatagtgttgcaagtgttgaaggaaaagaggttgtatgctaagttgtcaaaatgtgagttctggttaaatgaagtaagtttcctgg 14885508  T
Q  117 gccatattattt 128  Q
    | || |||||||    
T  14885509 gtcacattattt 14885520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 37541799 - 37541910
Alignment:
Q  17 gcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttg 116  Q
    |||||||||||||  || || ||||||||| | || || |||| ||||||||| ||||| ||||||||||||||| |||||| ||||||||||||||| |    
T  37541799 gcagagcatctgagaatagtgttgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagttttctgg 37541898  T
Q  117 gccatattattt 128  Q
    | || |||||||    
T  37541899 gtcacattattt 37541910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 19771939 - 19771817
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  19771939 aagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 19771840  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  19771839 gagttttctaggccatgttattt 19771817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 24796809 - 24796926
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  || || ||||||||| | || || |||| ||||||||| ||||| ||||||||||| ||| |||||  |||||||||||    
T  24796809 gagcatgcagagcatctgagaatagtgttgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgaattctggttacatgaagtaagtt 24796908  T
Q  111 ttcttggccatattattt 128  Q
    |||| || || |||||||    
T  24796909 ttctgggtcacattattt 24796926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 20801376 - 20801261
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||||| |||||||||||  | ||||| || || || || ||||||||| |||| |  || ||    
T  20801376 aagaagaacatgctgagcatctgaagattgtcttgcaagtgctgaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaggt 20801277  T
Q  106 aagttttcttggccat 121  Q
    |||||| |||||||||    
T  20801276 aagtttccttggccat 20801261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 128
Target Start/End: Complemental strand, 23473179 - 23473084
Alignment:
Q  33 ttgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 128  Q
    |||| ||||||||||| |||||||||||||| ||||| || |||||||| |||||||||  ||| | ||| || ||||||||||||||| ||||||    
T  23473179 ttgttttgcaagtgctgaaagagaagaagttatatgctaaattgtcaaagtgtgagttctagttgaatgaggtgagttttcttggccatgttattt 23473084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 14998154 - 14998268
Alignment:
Q  14 catgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttc 113  Q
    ||||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  ||||| |||||||    
T  14998154 catgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttc 14998253  T
Q  114 ttggccatattattt 128  Q
    | |||||| ||||||    
T  14998254 taggccatgttattt 14998268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 16358481 - 16358359
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  16358481 aagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 16358382  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  16358381 gagttttctaggccatgttattt 16358359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 18781093 - 18780971
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | | ||| || ||||| || ||||| ||| | || |  |||||    
T  18781093 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttttgcgaaattgtctaagtgtgaattctgattgaaggaagt 18780994  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  18780993 aagttttcttggccatgttattt 18780971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 22331294 - 22331416
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  22331294 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 22331393  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| ||| || ||||||    
T  22331394 gagttttctaggctatgttattt 22331416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 26737134 - 26737256
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| || ||| |||||||| | ||||||||||| ||||| |||||||| ||||| || || ||||| ||||| ||| |||| |  || ||    
T  26737134 aagaagaacatgctgaacatttgaagattattttgcaagtgctgaaagataagaagttatatgctaaattatcaaagtgtgaattctggttgaaagaggt 26737233  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  26737234 aagttttcttggccatgttattt 26737256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 27612333 - 27612211
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  27612333 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 27612234  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  27612233 gagttttctaggccatgttattt 27612211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 27666897 - 27667019
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| | ||||||    
T  27666897 aagaagaacatgccgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaatgaagt 27666996  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||||||| ||||||    
T  27666997 gagtttccttggccatgttattt 27667019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 34568473 - 34568351
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  34568473 aagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 34568374  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  34568373 gagttttctaggccatgttattt 34568351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 37289903 - 37290025
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  37289903 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 37290002  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  37290003 gagttttctaggccatgttattt 37290025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 28893393 - 28893464
Alignment:
Q  50 aaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccat 121  Q
    |||||||  |||||||||||||||||||| || || |||||| ||||||||||||| |||||||| ||||||    
T  28893393 aaagagagaaagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccat 28893464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 28914864 - 28914935
Alignment:
Q  50 aaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccat 121  Q
    |||||||  |||||||||||||||||||| || || |||||| ||||||||||||| |||||||| ||||||    
T  28914864 aaagagagaaagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccat 28914935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 28922219 - 28922290
Alignment:
Q  50 aaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccat 121  Q
    |||||||  |||||||||||||||||||| || || |||||| ||||||||||||| |||||||| ||||||    
T  28922219 aaagagagaaagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccat 28922290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 28930132 - 28930203
Alignment:
Q  50 aaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccat 121  Q
    |||||||  |||||||||||||||||||| || || |||||| ||||||||||||| |||||||| ||||||    
T  28930132 aaagagagaaagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccat 28930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 22136647 - 22136525
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | | ||| || ||||| || ||||| ||| |||| |  |||||    
T  22136647 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttttgctaaattgtctaagtgtgaattctggttgaaagaagt 22136548  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  22136547 gagttttctaggccatgttattt 22136525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 22463912 - 22463790
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| ||  |||||||||| |||||  |  | || ||||  |||||||||||||||||||| || |  |||||| |||||||||||||    
T  22463912 aagaggagcatgcagaacacttgaagattgtgttgcagattttgaaggagagaaagttgtatgccaagttgtcgaagtacgagttctggttaagtgaagt 22463813  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  22463812 gagttttctaggccatgttattt 22463790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 27520385 - 27520263
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  27520385 aagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 27520286  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  27520285 gagttttctaggccatgttattt 27520263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 27683809 - 27683927
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    ||||| ||||| ||||||||||||||||| ||||||||| | | |||||||||| | ||||| || ||||| || ||||| ||| |||| |  ||||| |    
T  27683809 gaagaacatgctgagcatctgaagattgttttgcaagtgttgagagagaagaagctttatgctaaattgtctaagtgtgaattctggttcaaagaagtga 27683908  T
Q  108 gttttcttggccatattat 126  Q
    ||||||| |||||| ||||    
T  27683909 gttttctaggccatgttat 27683927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 40710759 - 40710637
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  || ||    
T  40710759 aagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaggt 40710660  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||||||| ||||||    
T  40710659 gagtttccttggccatgttattt 40710637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 20777830 - 20777759
Alignment:
Q  50 aaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccat 121  Q
    |||||||  |||||||||||||||||||| || || |||||| ||||||||||||| ||||| || ||||||    
T  20777830 aaagagagaaagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagtttcctaggccat 20777759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 20823370 - 20823300
Alignment:
Q  50 aaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcca 120  Q
    |||||||  |||||||||||||||||||| || || |||||| ||||||||||||| ||||| || |||||    
T  20823370 aaagagagaaagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagtttcctcggcca 20823300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 21935597 - 21935679
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagtt 90  Q
    ||||||||||| |||||| ||| |||||| ||||||||  | ||||||||  |||||| |||||||||||| || ||||||||    
T  21935597 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtt 21935679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 29474480 - 29474534
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaa 60  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||    
T  29474480 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaa 29474534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 21337701 - 21337755
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaa 60  Q
    ||||||| ||||| |||||  |||||||||| ||||||||||| |||||||||||    
T  21337701 aagaagaacatgctgagcacttgaagattgttttgcaagtgctgaaagagaagaa 21337755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 21562431 - 21562512
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtga 87  Q
    |||||||||||||||||||| | || ||||| || |||||| | || || || ||| ||||||||||||| || ||||||||    
T  21562431 aagaagagcatgcagagcatttaaaaattgtgtttcaagtgttgaaggaaaaaaagctgtatgccaagttttccaaatgtga 21562512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 3e-44; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 15323264 - 15323142
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  15323264 aagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggttaagtgaagt 15323165  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  15323164 aagttttcttggccatattattt 15323142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 15357345 - 15357467
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| ||||||||||||||||| |||||  | ||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |    
T  15357345 aagaagagcatgcagaacatctgaagattgtattacaagtattgaaagaaaagaagttgtatgccaagttgtcgaaatgtgagttctggttaagtgaatt 15357444  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  15357445 aagttttcttggccacattattt 15357467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 15072403 - 15072284
Alignment:
Q  9 aagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaag 108  Q
    |||||||||||||||||||||||||||| ||||||||| | ||||| |||| |||||||||||||||||| |||||||| ||| ||||||||||||||||    
T  15072403 aagagcatgcagagcatctgaagattgtgttgcaagtgttgaaagaaaagaggttgtatgccaagttgtccaaatgtgaattctggttaagtgaagtaag 15072304  T
Q  109 ttttcttggccatattattt 128  Q
    ||||||||| || |||||||    
T  15072303 ttttcttggtcacattattt 15072284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 15001590 - 15001711
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| ||||||| |||||| ||||||||| | ||||| ||||||||||||||||||||||  ||||||||| || |||||||||||||    
T  15001590 aagaagagcatgcagaacatctgaggattgtgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtttaaatgtgag-tctggttaagtgaagt 15001688  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  15001689 aagttttcttggccacattattt 15001711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 16149758 - 16149636
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| ||||||||||||||||||||| |  | ||||| |||||||||||||| ||||| || || ||||||||| |||||||||||||    
T  16149758 aagaagagcatgcagaacatctgaagattgtattgcaaatattgaaagaaaagaagttgtatgctaagttatcgaagtgtgagttctggttaagtgaagt 16149659  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||| |||| |||||||    
T  16149658 aagttttctttgccacattattt 16149636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 16153904 - 16153782
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| ||||||||||||||||||||| |  | ||||| |||||||||||||| ||||| || || ||||||||| |||||||||||||    
T  16153904 aagaagagcatgcagaacatctgaagattgtattgcaaatattgaaagaaaagaagttgtatgctaagttatcgaagtgtgagttctggttaagtgaagt 16153805  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||| |||| |||||||    
T  16153804 aagttttcttagccacattattt 16153782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 8707958 - 8707836
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||  |||  |||| ||||||||| | || || |||||| |||||||||||||||| |||||||| ||  |||||||||||||    
T  8707958 aagaagagcatgcagagcattagaaagttgtgttgcaagtgttgaaggaaaagaagatgtatgccaagttgtccaaatgtgaattttggttaagtgaagt 8707859  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||| |||||||||||||||    
T  8707858 aagttttattggccatattattt 8707836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 14696160 - 14696038
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| |||||||||| ||||||||||| ||||||||||| || ||||| ||||||||||| ||||||||| |||| | ||| ||    
T  14696160 aagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaatttatatgctaagttgtcaaagtgtgagttctggttgaatgaggt 14696061  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  14696060 gagttttcttggccatgttattt 14696038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 3263024 - 3263141
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  ||||||||||||||| | || || |||| ||||||||| ||||| ||||||||||||||| |||||| |||||||||||    
T  3263024 gagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagtt 3263123  T
Q  111 ttcttggccatattattt 128  Q
    |||| || || |||||||    
T  3263124 ttctgggtcacattattt 3263141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 51605017 - 51605139
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||  |||||  |||||||  | ||||||||||||||||||||||| ||||| |||||||||||  || ||||||||||    
T  51605017 aagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggctaagtgaagt 51605116  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||| ||||||||||    
T  51605117 gagtttccttggtcatattattt 51605139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 29451767 - 29451884
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    ||||||||||| |||||||  ||||||||||||||| | || || ||||  |||||||| |||||||| |||||||||||| ||||||||||||| || |    
T  29451767 gagcatgcagatcatctgagaattgtattgcaagtgttgaaggaaaagagattgtatgcaaagttgtcgaaatgtgagttctggttaagtgaagtgagct 29451866  T
Q  111 ttcttggccatattattt 128  Q
    |||| || ||||||||||    
T  29451867 ttctgggtcatattattt 29451884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 14682611 - 14682492
Alignment:
Q  9 aagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaag 108  Q
    |||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | |||||||| ||||| || ||||| ||| |||| |  ||||| ||    
T  14682611 aagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagtgag 14682512  T
Q  109 ttttcttggccatattattt 128  Q
    ||||||||||||| ||||||    
T  14682511 ttttcttggccatgttattt 14682492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 44660096 - 44660199
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  ||||| ||||||||| | || || |||| ||||||||| |||||||| |||||||||||| || |||||||||| || |    
T  44660096 gagcatgcagagcatctgagaattgtgttgcaagtgttgaaggaaaagaggttgtatgcaaagttgtcgaaatgtgagttctggctaagtgaagtgagct 44660195  T
Q  111 ttct 114  Q
    ||||    
T  44660196 ttct 44660199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 8051588 - 8051710
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | |||||||| ||||| || ||||| ||| |||| |  |||||    
T  8051588 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagt 8051687  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  8051688 gagttttctaggccatgttattt 8051710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 12478647 - 12478525
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | |||||||| ||||| || ||||| ||| |||| |  |||||    
T  12478647 aagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagt 12478548  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  12478547 gagttttctaggccatgttattt 12478525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 120
Target Start/End: Original strand, 14849331 - 14849445
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||  |||||| |||||||||| ||||||||||| || ||||||||||| ||||| || |||||||| ||||| ||| |||| |  || ||    
T  14849331 aagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaagaagttatatgctaaattgtcaaagtgtgaattctggttgaaagaggt 14849430  T
Q  106 aagttttcttggcca 120  Q
    |||||||||||||||    
T  14849431 aagttttcttggcca 14849445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 19776758 - 19776880
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | |||||||| ||||| || ||||| ||| |||| |  |||||    
T  19776758 aagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagt 19776857  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  19776858 gagttttctaggccatgttattt 19776880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 23957794 - 23957672
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  23957794 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 23957695  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  23957694 gagttttctaggccatgttattt 23957672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 16353472 - 16353595
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || || || || ||||||||| ||||||  || ||    
T  16353472 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgagttctggttaaaagaggt 16353571  T
Q  106 aagttttct-tggccatattattt 128  Q
    ||||||||| ||||||| ||||||    
T  16353572 aagttttctntggccatgttattt 16353595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 14301944 - 14302066
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  14301944 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 14302043  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  14302044 gagttttctaggccatgttattt 14302066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 18225411 - 18225533
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  18225411 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 18225510  T
Q  106 aagttttcttggccatattattt 128  Q
    |  ||||||||||||| ||||||    
T  18225511 accttttcttggccatgttattt 18225533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 27713383 - 27713261
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| |||  ||| |  |||||    
T  27713383 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctagttgaaagaagt 27713284  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  27713283 gagttttctaggccatgttattt 27713261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 40475087 - 40474965
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  40475087 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtcgaagtgtgaattctggttgaaagaagt 40474988  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  40474987 gagttttctaggccatgttattt 40474965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 126
Target Start/End: Original strand, 18613789 - 18613909
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |   ||||    
T  18613789 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgcaaaattgtctaagtgtgaattctggttgaaaaaagt 18613888  T
Q  106 aagttttcttggccatattat 126  Q
    ||||||||| |||||| ||||    
T  18613889 aagttttctaggccatgttat 18613909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 120
Target Start/End: Original strand, 1647502 - 1647616
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| || ||||||||||| ||||   | || ||||| |  ||||||||||| |||||||| || || |||||| |||||||||||||    
T  1647502 aagaggagcatgcagaacacctgaagattgtgttgcggattctgaaagaaagaaagttgtatgctaagttgtcgaagtgcgagttctggttaagtgaagt 1647601  T
Q  106 aagttttcttggcca 120  Q
     |||||| |||||||    
T  1647602 gagttttgttggcca 1647616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 8388459 - 8388337
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| | ||| ||    
T  8388459 aagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaatgaggt 8388360  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||||||| ||||||    
T  8388359 gagtttccttggccatgttattt 8388337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 11205457 - 11205578
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| || ||||  ||||||||||||||| | || || |||| ||||||| | | ||| | ||||||||||||| |||||||||||||    
T  11205457 aagaggagcatgcagaacacctgagaattgtattgcaagtgttgaaggaaaagaggttgtatacaaggtttt-aaaatgtgagttctggttaagtgaagt 11205555  T
Q  106 aagttttcttggccatattattt 128  Q
    ||| ||||| || || |||||||    
T  11205556 aagctttctgggtcacattattt 11205578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 15145850 - 15145972
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||| ||||| ||||||||| | ||||||| |||  | ||||| || || || || ||||||||| |||| |  || ||    
T  15145850 aagaagaacatgctgagcatctgaacattgtcttgcaagtgttgaaagagaggaaactttatgctaaattatctaagtgtgagttctggttgaaagaggt 15145949  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  15145950 aagttttcttggccatgttattt 15145972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 15257975 - 15257913
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatg 68  Q
    |||||||||||||||||||||| |||||||||||||||||    ||||| |||||||||||||    
T  15257975 aagaagagcatgcagagcatctaaagattgtattgcaagtatcgaaagaaaagaagttgtatg 15257913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 27902433 - 27902311
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| ||  |||||||||| |||||  |  | |||||||  |||||||||||||||||||| || || ||||||  ||||| ||||||    
T  27902433 aagaggagcatgcagaacacatgaagattgtgttgcagattttgaaagagagaaagttgtatgccaagttgtcgaagtgcgagttctagttaaatgaagt 27902334  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| ||||| |||||||    
T  27902333 gagttttctaggccacattattt 27902311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 14161517 - 14161397
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| ||||||||||  | || ||| | || || |  |||||||||||||||||||| |||||||| ||| |||| | ||| ||    
T  14161517 aagaagaacatgctgagcatttgaagattgttctacaggtgttgaaggaaagtaagttgtatgccaagttgtcgaaatgtgaattctggttgaatgaggt 14161418  T
Q  106 aagttttcttggccatattat 126  Q
     |||||||||||||| |||||    
T  14161417 gagttttcttggccacattat 14161397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 16234957 - 16235011
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaa 60  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||    
T  16234957 aagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaa 16235011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 15247910 - 15247849
Alignment:
Q  65 tatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 128  Q
    ||||||| |||||||||  |||||||| ||||||| ||||||||||| |||||||| |||||||    
T  15247910 tatgccaggttgtcaaa--gtgagttctggttaagagaagtaagtttccttggccacattattt 15247849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 15291385 - 15291467
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagtt 90  Q
    ||||||||||| |||||| ||| |||||| ||||||||  | ||||||||  ||||||  ||||||||||| || ||||||||    
T  15291385 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagtt 15291467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 1640326 - 1640427
Alignment:
Q  27 tgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattat 126  Q
    |||||||||| ||||||||| | |||||||||||  | ||||| || || ||||| ||||| ||| |||| |  || |||||||||||| ||||| ||||    
T  1640326 tgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattttcaaagtgtgaattctggttgaaagaggtaagttttcttagccatgttat 1640425  T
Q  127 tt 128  Q
    ||    
T  1640426 tt 1640427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 17093114 - 17093166
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaag 58  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | |||||||||    
T  17093114 aagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaag 17093166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 31693638 - 31693760
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||||||||||||  | ||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  31693638 aagaagagcatgcagaacatctgaagattgtattgcaagttttgaaagaaaagaagttgtatgctaagttgtcaaaatgtgagttctggttaagtgaagt 31693737  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  31693738 aagttttcttggccacattattt 31693760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 31940579 - 31940457
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||| |||||||||| |||||||||||||||||||||||  | ||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  31940579 aagaatagcatgcagaacatctgaagattgtattgcaagttttgaaagaaaagaagttgtatgctaagttgtcaaaatgtgagttctggttaagtgaagt 31940480  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  31940479 aagttttcttggccacattattt 31940457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 12358980 - 12359102
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||||||||||||  | |||||||| ||||||||||| |||||||| || ||||||||| |||||||||||||    
T  12358980 aagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagt 12359079  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  12359080 gagttttcttggccacattattt 12359102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 15229279 - 15229157
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||| ||| | ||||||||| | ||||| |||||||||||||||| |||||| |||||||| ||| |||||||||||||    
T  15229279 aagaagagcatgcagagcatctgaaaattatgttgcaagtgttgaaagaaaagaagttgtatgccatgttgtccaaatgtgaattcgggttaagtgaagt 15229180  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  15229179 aagttttcttggccacattattt 15229157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 15235147 - 15235025
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||| ||| | ||||||||| | ||||| |||||||||||||||| |||||| |||||||| ||| |||||||||||||    
T  15235147 aagaagagcatgcagagcatctgaaaattatgttgcaagtgttgaaagaaaagaagttgtatgccatgttgtccaaatgtgaattcgggttaagtgaagt 15235048  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  15235047 aagttttcttggccacattattt 15235025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 14088347 - 14088227
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    |||||||||||||| ||||||| |||||||||||||||  | ||||||||||||||||||||||| |||||||| || |||||  ||||||||||||| |    
T  14088347 gaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggttaagtgaagtga 14088248  T
Q  108 gttttcttggccatattattt 128  Q
    |||||||||||||||||||||    
T  14088247 gttttcttggccatattattt 14088227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 11950361 - 11950483
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| ||| |||||||||| ||||||||  | |||||||||||||||||||| |||||||| || ||||||||| |||||||||||||    
T  11950361 aagaagagcatgcagaacatttgaagattgtgttgcaagtattgaaagagaagaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagt 11950460  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  11950461 gagttttcttggccacattattt 11950483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 13970575 - 13970695
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    |||||||||||||| ||||||| | |||||||||||||  | ||||||||||||||||||||||| |||||||| || |||||  ||||||||||||| |    
T  13970575 gaagagcatgcagaacatctgagggttgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggttaagtgaagtga 13970674  T
Q  108 gttttcttggccatattattt 128  Q
    |||||||||||||||||||||    
T  13970675 gttttcttggccatattattt 13970695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 17188048 - 17187928
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    |||||||||||||| |||||||| ||||||||||||||  | |||||||| |||||||||||||| ||||| || ||||||||| ||||||||||||| |    
T  17188048 gaagagcatgcagaacatctgaaaattgtattgcaagtattgaaagagaaaaagttgtatgccaaattgtcgaagtgtgagttctggttaagtgaagtga 17187949  T
Q  108 gttttcttggccatattattt 128  Q
    ||||||||||||| |||||||    
T  17187948 gttttcttggccacattattt 17187928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 12180014 - 12179892
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||||||||| |||||| |  | ||||| |||||||||||||| |||||||| || ||||||||| |||||| ||||||    
T  12180014 aagaagagcatgcagagcatctgaagattgtgttgcaaatattgaaagaaaagaagttgtatgctaagttgtcgaagtgtgagttctggttaattgaagt 12179915  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  12179914 gagttttcttggccacattattt 12179892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 16834968 - 16835085
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    ||||||||||| ||||||| |||||||||||||||  | ||||| ||||||||||||||||| |||||||||||||||||  || |||||||||| ||||    
T  16834968 gagcatgcagaacatctgaggattgtattgcaagtattgaaagaaaagaagttgtatgccaaattgtcaaaatgtgagttttggctaagtgaagtgagtt 16835067  T
Q  111 ttcttggccatattattt 128  Q
    | ||||||||||||||||    
T  16835068 tccttggccatattattt 16835085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 16328113 - 16328235
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||||  |||||||||||||   | |||||||||| ||||||||| ||||||||||||||||||||  |||||||||||||    
T  16328113 aagaggagcatgcagagcatctgagaattgtattgcaagatttgaaagagaagaggttgtatgcaaagttgtcaaaatgtgagttatggttaagtgaagt 16328212  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| || ||||||||||    
T  16328213 gagttttctgggtcatattattt 16328235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 16379381 - 16379503
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||  ||||| ||||||||  | ||||| ||||||||||||||||| |||||||||||||||||  || ||||||||||    
T  16379381 aagaagagcatgcagaacatctgagaattgtgttgcaagtattgaaagaaaagaagttgtatgccaaattgtcaaaatgtgagttttggctaagtgaagt 16379480  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||| ||||| ||||||||||    
T  16379481 aagtttccttggtcatattattt 16379503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 11959622 - 11959747
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||||  ||||||||||||||  | ||||| |||| ||||||||| ||||||||||||||||| ||| |||||||||||||    
T  11959622 aagaggagcatgcagagcatctgagaattgtattgcaagttttgaaagaaaagaggttgtatgcaaagttgtcaaaatgtgaattctggttaagtgaagt 11959721  T
Q  106 aagttttcttggccatattatttgtg 131  Q
     |||||||| || || ||||||||||    
T  11959722 gagttttctgggtcacattatttgtg 11959747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 10385345 - 10385225
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    ||||||||||||| ||||||||  ||||||||||||||| | || || |||| ||||||||| ||||||||||||||||||||| ||||||||||||| |    
T  10385345 gaagagcatgcagggcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttgtcaaaatgtgagttctggttaagtgaagtga 10385246  T
Q  108 gttttcttggccatattattt 128  Q
    | ||||| || || |||||||    
T  10385245 gctttctgggtcacattattt 10385225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 28755989 - 28755872
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  ||||| ||||||||| | || || |||| ||||||||| ||||| ||||||||||||||| |||||| |||||||||||    
T  28755989 gagcatgcagagcatctgagaattgtgttgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagtt 28755890  T
Q  111 ttcttggccatattattt 128  Q
    |||| || || |||||||    
T  28755889 ttctgggtcacattattt 28755872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 41179198 - 41179076
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||| |||| |||||||  |||||  |||||||  | ||||||||||||||||||||||| ||||| |||||||||||  || ||||||||||    
T  41179198 aagaagagcattcagaacatctgagaattgtgctgcaagttttgaaagagaagaagttgtatgccaaattgtcgaaatgtgagttttggctaagtgaagt 41179099  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||| ||||||||||    
T  41179098 gagtttccttggtcatattattt 41179076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 15340935 - 15340813
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| |||| |||| | |||||||||||  | |||||||| ||||| || ||||||||| |||| |  |||||    
T  15340935 aagaagaacatgctgagcatctgaagattgtcttgcgagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagt 15340836  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  15340835 gagttttcttggccatgttattt 15340813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 15400981 - 15401103
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| |||| |||| | |||||||||||  | |||||||| ||||| || ||||||||| |||| |  |||||    
T  15400981 aagaagaacatgctgagcatctgaagattgtcttgcgagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagt 15401080  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  15401081 gagttttcttggccatgttattt 15401103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 13254356 - 13254234
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  13254356 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 13254257  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  13254256 gagttttctaggccatgttattt 13254234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 14874963 - 14875085
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || || || || ||||||||| |||| |  |||||    
T  14874963 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaagt 14875062  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||| | ||||||    
T  14875063 aagttttcttggccttgttattt 14875085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 15346709 - 15346831
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  15346709 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 15346808  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  15346809 gagttttctaggccatgttattt 15346831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 16693830 - 16693708
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | |||||||||||  | ||||| || ||||| || ||||||||| |||| |  |||||    
T  16693830 aagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgagttctggttgaaagaagt 16693731  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||| ||| ||||||    
T  16693730 aagttttcttggtcatgttattt 16693708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 16805419 - 16805533
Alignment:
Q  14 catgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttc 113  Q
    ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||||||||||    
T  16805419 catgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagtaagttttc 16805518  T
Q  114 ttggccatattattt 128  Q
    |||||||| ||||||    
T  16805519 ttggccatgttattt 16805533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 44778923 - 44778801
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||  ||||| ||||||||  | ||||| | ||| |||||||||||  |||| |||||||||||  || ||||||||||    
T  44778923 aagaagagcatgcagaacatctgagaattgtgttgcaagttttgaaagaaaggaaattgtatgccaaactgtcgaaatgtgagttttggctaagtgaagt 44778824  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||| ||||||||||    
T  44778823 gagtttccttggtcatattattt 44778801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 48427113 - 48426991
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  48427113 aagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 48427014  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  48427013 gagttttctaggccatgttattt 48426991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 18132816 - 18132921
Alignment:
Q  23 catctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccata 122  Q
    ||||||| |||| | ||||||||| | ||||| |||||||||||||| |||||||| || || |||||| | ||||||||||| | |||||||||||| |    
T  18132816 catctgaggattatgttgcaagtgttgaaagaaaagaagttgtatgctaagttgtcgaagtgcgagttctgattaagtgaagtgacttttcttggccaca 18132915  T
Q  123 ttattt 128  Q
    ||||||    
T  18132916 ttattt 18132921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 47125615 - 47125498
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  || || ||||||||| | || || |||| ||||||||| ||||| ||||||||||| ||| |||||  |||||||||||    
T  47125615 gagcatgcagagcatctgagaatagtgttgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgaattctggttacatgaagtaagtt 47125516  T
Q  111 ttcttggccatattattt 128  Q
    |||| || || |||||||    
T  47125515 ttctgggtcacattattt 47125498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 5109075 - 5109197
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | ||||| |||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  5109075 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagaaaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 5109174  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  5109175 gagttttctaggccatgttattt 5109197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 10007266 - 10007144
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||| | ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  10007266 aagaagaacattctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 10007167  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  10007166 gagttttctaggccatgttattt 10007144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 12499914 - 12499792
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | | |||||||||  | ||||| || || || || ||||||||| |||| |  || ||    
T  12499914 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgatagagaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaggt 12499815  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  12499814 aagttttcttggccatgttattt 12499792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 13943700 - 13943578
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||  ||| |  |||||||  | ||||| | |||||||||||||||  |||| |||||||||||  || ||||||||||    
T  13943700 aagaagagcatgcagaacatctgagaattatgctgcaagttttgaaagaaaggaagttgtatgccaaactgtcgaaatgtgagttttggctaagtgaagt 13943601  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||| ||||||||||    
T  13943600 gagtttccttggtcatattattt 13943578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 15261296 - 15261174
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| |||||||||| ||||||||||| || ||||||||| | ||||| || |||| ||| ||||| ||| |||| |  || ||    
T  15261296 aagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaggagaagaagctttatgctaaattgtaaaagtgtgaattctggttgaaagaggt 15261197  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  15261196 gagttttcttggccatgttattt 15261174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 15723398 - 15723520
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  15723398 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtcgaagtgtgaattctggttgaaagaagt 15723497  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  15723498 gagttttctaggccatgttattt 15723520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 16637439 - 16637317
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  16637439 aagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 16637340  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  16637339 gagttttctaggccatgttattt 16637317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 20060518 - 20060640
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | |||||||| ||||| || ||||| ||  |||| |  |||||    
T  20060518 aagaagaacatgccgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattttggttgaaagaagt 20060617  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  20060618 gagttttctaggccatgttattt 20060640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 10907862 - 10907754
Alignment:
Q  20 gagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcc 119  Q
    ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  ||||| |||||||| ||||    
T  10907862 gagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagtgagttttctaggcc 10907763  T
Q  120 atattattt 128  Q
    || ||||||    
T  10907762 atgttattt 10907754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 15014246 - 15014342
Alignment:
Q  32 attgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 128  Q
    ||||| ||||||||||| || ||||||||||| ||||||||||| || || || || ||| |||| |  ||||| ||||||||||||||||||||||    
T  15014246 attgttttgcaagtgctgaaggagaagaagttatatgccaagttatcgaagtgcgaattctggttgaacgaagtgagttttcttggccatattattt 15014342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 5423394 - 5423516
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | |||||||||||  | ||||| || ||||| || ||||| |||  ||| | ||||||    
T  5423394 aagaagaacatgccgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattcttgttgaatgaagt 5423493  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||||||| ||||||    
T  5423494 gagtttccttggccatgttattt 5423516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 6602402 - 6602280
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||||||| |||||| || |||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| | ||||||    
T  6602402 aagaagaacatgctgagcatctgacgattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaatgaagt 6602303  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||||||| ||||||    
T  6602302 gagtttccttggccatgttattt 6602280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 10418518 - 10418612
Alignment:
Q  26 ctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcca 120  Q
    ||||||||||| |||||| |  | ||||||| |||||||||||||||| |||| || || |||||| |||||| |||||| |||||||| |||||    
T  10418518 ctgaagattgtgttgcaaatattgaaagagaggaagttgtatgccaagctgtcgaagtgcgagttctggttaaatgaagtgagttttctaggcca 10418612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 11889746 - 11889811
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaag 73  Q
    ||||| ||||| |||||| |||||||||| ||||||||||| || ||||||||||| |||||||||    
T  11889746 gaagaacatgctgagcatttgaagattgttttgcaagtgctgaaggagaagaagttatatgccaag 11889811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 13318955 - 13319063
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| |||||||||||| | |||||| |  | |||||||  || |||||||| || ||||| || || |||||| |||||||||||||    
T  13318955 aagaggagcatgcagaacatctgaagattatgttgcaaattttgaaagagagaaatttgtatgctaaattgtcgaagtgcgagttctggttaagtgaagt 13319054  T
Q  106 aagttttct 114  Q
     ||||||||    
T  13319055 gagttttct 13319063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 3687609 - 3687555
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaa 60  Q
    ||||||| ||||||||||||||||||||||| || |||||| | |||||||||||    
T  3687609 aagaagaacatgcagagcatctgaagattgtcttacaagtgttgaaagagaagaa 3687555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 12888375 - 12888253
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||| ||||||||||| || |||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  12888375 aagaagaacatgccgagcacctgaagattgtcttacaagtgttgaaagagaagaaactttatgcaaaattgtctaagtgtgaattctggttgaaagaagt 12888276  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||||||| ||||||    
T  12888275 gagtttacttggccatgttattt 12888253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 15587856 - 15587978
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||  ||||||||||||||||| || |||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  15587856 aagaagaacatgttgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 15587955  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  15587956 gagttttctaggccatgttattt 15587978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 30139480 - 30139398
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagtt 90  Q
    ||||||||||| |||||| ||| |||||| ||||||||  | ||||||||  |||||| |||||||||||| || ||||||||    
T  30139480 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtt 30139398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 30149031 - 30148949
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagtt 90  Q
    ||||||||||| |||||| ||| |||||| ||||||||  | ||||||||  |||||| |||||||||||| || ||||||||    
T  30149031 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtt 30148949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 53383482 - 53383604
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| || |||||||||||||| || || ||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| | ||||||    
T  53383482 aagaagaacatgcggaacatctgaagattgtcttacaggtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaatgaagt 53383581  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||||||| ||||||    
T  53383582 gagtttccttggccatgttattt 53383604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 8272865 - 8272947
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagtt 90  Q
    ||||||||||| |||||| ||| |||||| ||||||||  | ||||||||  ||||||  ||||||||||| || ||||||||    
T  8272865 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagtt 8272947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 17491516 - 17491394
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| ||||| | || ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  17491516 aagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgaaagaagt 17491417  T
Q  106 aagttttcttggccatattattt 128  Q
     || |||||||| ||| ||||||    
T  17491416 gagctttcttggacatgttattt 17491394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 6826 - 6706
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    |||||||||| ||| |||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  6826 gaagagcatgtagaacatctgaagattgtattgcaagtattgaaagagaagaagttgtatgccaagttgtcaaaatgtgagttctggttaagtgaagtga 6727  T
Q  108 gttttcttggccatattattt 128  Q
    ||||||||||||| |||||||    
T  6726 gttttcttggccacattattt 6706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1830 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold1830
Description:

Target: scaffold1830; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 1072 - 950
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||| ||||||||||||||  | ||||| ||||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  1072 aagaagagcatgcagaacatctgaatattgtattgcaagtattgaaagaaaagaagttgtatgccaagttgtcaaaatgtgagttctagttaaatgaagt 973  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  972 aagttttcttggccatattattt 950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 4254 - 4132
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||| | |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||  |||||||||||||    
T  4254 aagaagagcatgcataacatctgaagattgtattgcaagtgttgaaagagaagaagttgtatgccaagttgtcaaaatgtgaattttggttaagtgaagt 4155  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||| |||||||| ||||    
T  4154 aagttttctgggccatatcattt 4132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 5317 - 5439
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||||||||||||||||||||| |||||||| ||  ||||||||| |||    
T  5317 aagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattttggttaagtggagt 5416  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  5417 aagttttcttggccatattattt 5439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 1947 - 1825
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||| |||||||| ||  |||||||||||||    
T  1947 aagaagagcatgcagagcatctgaagattgtattgcaagtgttgaaagaaaataagttgtatgccaagttgtccaaatgtgaattttggttaagtgaagt 1848  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||| |||||||||||    
T  1847 aagttttcttgaccatattattt 1825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 87; Significance: 7e-42; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 453441 - 453563
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| ||||||||||||||||| |||||  | ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  453441 aagaagagcatgcagaacatctgaagattgtattacaagtattgaaagagaagaagttgtatgtcaagttgtcaaaatgtgagttctggttaagtgaagt 453540  T
Q  106 aagttttcttggccatattattt 128  Q
    ||| ||||||||||| |||||||    
T  453541 aagatttcttggccacattattt 453563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 515592 - 515703
Alignment:
Q  17 gcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttg 116  Q
    |||||||||||||  ||||| ||||||||| | |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| |||||||| |    
T  515592 gcagagcatctgagaattgtcttgcaagtgttgaaagagaagaggttgtatgcaaagttgtcaaaatgtgagttctggttaagtgaagtgagttttctgg 515691  T
Q  117 gccatattattt 128  Q
    | || |||||||    
T  515692 gtcacattattt 515703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 495096 - 494981
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||| || |||||||||| ||||||||||| |||||||||||| | ||||| || |||||||| | ||||||| |||| | ||| ||    
T  495096 aagaagaacatgctgagtatttgaagattgttttgcaagtgctgaaagagaagaagctatatgctaaattgtcaaagtctgagttctggttgaatgaggt 494997  T
Q  106 aagttttcttggccat 121  Q
     |||||||||||||||    
T  494996 gagttttcttggccat 494981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 7e-42; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 14378286 - 14378408
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||||||||||||||||||||  | |||||||| |||||||||||||||||||| |||||||||||  |||||||||||||    
T  14378286 aagaggagcatgcagagcatctgaagattgtattgcaagtcttgaaagagaaaaagttgtatgccaagttgtcgaaatgtgagttttggttaagtgaagt 14378385  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  14378386 aagttttcttggccacattattt 14378408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 14379836 - 14379958
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||||||||||||||||||||  | |||||||| |||||||||||||||||||| |||||||||||  |||||||||||||    
T  14379836 aagaggagcatgcagagcatctgaagattgtattgcaagtcttgaaagagaaaaagttgtatgccaagttgtcgaaatgtgagttttggttaagtgaagt 14379935  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  14379936 aagttttcttggccacattattt 14379958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 19454935 - 19454813
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||||||||||||||| |||||||||||  | ||||| |||||||||||||| ||||||||||| ||||||||| |||||||||||||    
T  19454935 aagaagagcatgcagagcatctgaagatagtattgcaagttttgaaagaaaagaagttgtatgctaagttgtcaaagtgtgagttctggttaagtgaagt 19454836  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  19454835 gagttttcttggccacattattt 19454813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 5295576 - 5295698
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||||| |||| |||||||||||||||||| ||||| | |||| |||||||||||||    
T  5295576 aagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaaagaaaagaggttgtatgccaagttgtccaaatgcgtgttctggttaagtgaagt 5295675  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  5295676 aagttttcttggccacattattt 5295698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 19487642 - 19487764
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||||||| | |||||||| ||||||||| | || |  ||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  19487642 aagaagagcatgcagagcatttaaagattgtgttgcaagtgttgaaggtaaagaagttgtatgccaagttgtccaaatgtgaattctggttaagtgaagt 19487741  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  19487742 aagttttcttggccatattattt 19487764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 25769755 - 25769633
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||||||||| ||||||||| | ||| | | |||||||||||| |||||||| |||||||| ||| |||||||||||||    
T  25769755 aagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaataaatgaagttgtatgctaagttgtccaaatgtgaattctggttaagtgaagt 25769656  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  25769655 aagttttcttggccacattattt 25769633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 19881207 - 19881087
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    |||||||||||||| ||||||| |||||||||||||||  | |||||||||||  |||||||||| |||||||| || |||||| ||||||||||||| |    
T  19881207 gaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaaactgtatgccaaattgtcaaagtgcgagttctggttaagtgaagtga 19881108  T
Q  108 gttttcttggccatattattt 128  Q
    |||||||||||||||||||||    
T  19881107 gttttcttggccatattattt 19881087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 18796601 - 18796479
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||| ||||||||  | ||||||||||||||||||||||| ||||| || ||||||||| |||||| ||||||    
T  18796601 aagaagagcatgcagaacatctgaagattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggttaaatgaagt 18796502  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||| |||||| |||||||    
T  18796501 gagttttcatggccacattattt 18796479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 120
Target Start/End: Complemental strand, 21473512 - 21473398
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| |||||||||||||| ||||||||| | ||||| | ||||||||||| ||||||||| |||||||| ||| |||||||||||||    
T  21473512 aagaggagcatgcagaacatctgaagattgtgttgcaagtgttgaaagaaaggaagttgtatgtcaagttgtccaaatgtgaattctggttaagtgaagt 21473413  T
Q  106 aagttttcttggcca 120  Q
    |||||||||||||||    
T  21473412 aagttttcttggcca 21473398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 34643958 - 34644078
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    |||||||||||||| ||||| |  ||||| ||||||||  | ||||||||||||||||||||||| ||||| || ||||||||| |||||||||||||||    
T  34643958 gaagagcatgcagaacatctaagaattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggttaagtgaagtaa 34644057  T
Q  108 gttttcttggccatattattt 128  Q
    |||| ||||||||||||||||    
T  34644058 gtttccttggccatattattt 34644078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 19436913 - 19436791
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||| |||||| | |||||||||||  |||||||||| |||||||| || ||||||||| | |||||||||||    
T  19436913 aagaagagcatgcagaacatctgaagattgtgttgcaaattctaaaagagaaagagttgtatgctaagttgtcgaagtgtgagttctgcttaagtgaagt 19436814  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| ||||| |||||||    
T  19436813 gagttttctgggccacattattt 19436791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 10467219 - 10467341
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||||  ||||||||||||||  | ||||| |||| ||||||||| ||||||||||||||||||||| ||||||| |||||    
T  10467219 aagaggagcatgcagagcatctgagaattgtattgcaagttttgaaagaaaagaggttgtatgcaaagttgtcaaaatgtgagttctggttaagcgaagt 10467318  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| || || |||||||    
T  10467319 gagttttctgggtcacattattt 10467341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 22828725 - 22828847
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | |||||||| ||||| || ||||||||| |||| |  |||||    
T  22828725 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagt 22828824  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  22828825 gagttttcttggccatgttattt 22828847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 18965665 - 18965787
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||| | |||||| |||||||||| || |||||| | |||||||||||||| ||||| ||||||||||| ||||| ||| |||| | ||| ||    
T  18965665 aagaagaacattctgagcatttgaagattgtttttcaagtgatgaaagagaagaagttatatgctaagttgtcaaagtgtgaattctggttgaatgaggt 18965764  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||||||||||||||    
T  18965765 gagtttccttggccatattattt 18965787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 24366318 - 24366201
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||| ||||  ||||||||||||||| | || || |||| ||||||||| |||||||| || ||||||||| ||||||||||||| || |    
T  24366318 gagcatgcagagcacctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgcaaagttgtcgaagtgtgagttctggttaagtgaagtgagct 24366219  T
Q  111 ttcttggccatattattt 128  Q
    |||| || || |||||||    
T  24366218 ttctgggtcacattattt 24366201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 16926008 - 16926123
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||||||||| || || ||||| ||| |||| |  || ||    
T  16926008 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaagttatctaagtgtgaattctggttgaaagaggt 16926107  T
Q  106 aagttttcttggccat 121  Q
    ||||||||||||||||    
T  16926108 aagttttcttggccat 16926123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 24294152 - 24294274
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  24294152 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 24294251  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  24294252 gagttttctaggccatgttattt 24294274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 27564203 - 27564325
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || || || || ||||| ||| |||| |  |||||    
T  27564203 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgaattctggttgaaagaagt 27564302  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  27564303 aagttttcttggccatgttattt 27564325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 5837603 - 5837703
Alignment:
Q  20 gagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcc 119  Q
    ||||||||||||| ||| ||||||||| | ||||| |||||| | |||||||||||||| || ||||||||| |||| |  || ||||||||||||||||    
T  5837603 gagcatctgaagactgttttgcaagtgttgaaagaaaagaagctttatgccaagttgtctaagtgtgagttctggttgaaagaggtaagttttcttggcc 5837702  T
Q  120 a 120  Q
    |    
T  5837703 a 5837703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 16961852 - 16961967
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||||||||  || || ||||| ||| |||| |  || ||    
T  16961852 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaagtcatctaagtgtgaattctggttgaaagaggt 16961951  T
Q  106 aagttttcttggccat 121  Q
    ||||||||||||||||    
T  16961952 aagttttcttggccat 16961967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 21568405 - 21568483
Alignment:
Q  50 aaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 128  Q
    ||||| |||||||||||||| |||||||| |||||||| ||| || ||| ||||||||||||||| ||||| |||||||    
T  21568405 aaagaaaagaagttgtatgctaagttgtcgaaatgtgaattctggctaattgaagtaagttttctcggccacattattt 21568483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 25608231 - 25608353
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||  |||| |||||| |||||||||| || |||||| | |||||||||||| | ||||| || |||||||| ||||| ||| |||| |  || ||    
T  25608231 aagaagaagatgctgagcatttgaagattgttttacaagtgttgaaagagaagaagctttatgctaaattgtcaaagtgtgaattctggttgaaagaggt 25608330  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  25608331 aagttttcttggccatgttattt 25608353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 28261567 - 28261689
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||||||||||||||||||||| || |||||| | |||||||||||  | |||||||| ||||| || ||||| ||| |||| |  |||||    
T  28261567 aagaagaacatgcagagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagt 28261666  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| | ||||||| ||||||    
T  28261667 gagtttccctggccatgttattt 28261689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 28284349 - 28284227
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||||||||||||||||||||| || |||||| | |||||||||||  | |||||||| ||||| || ||||| ||| |||| |  |||||    
T  28284349 aagaagaacatgcagagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagt 28284250  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| | ||||||| ||||||    
T  28284249 gagtttccctggccatgttattt 28284227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 28340316 - 28340438
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||||||||||||||||||||| || |||||| | |||||||||||  | |||||||| ||||| || ||||| ||| |||| |  |||||    
T  28340316 aagaagaacatgcagagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaagt 28340415  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| | ||||||| ||||||    
T  28340416 gagtttccctggccatgttattt 28340438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 18196103 - 18196178
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaa 81  Q
    |||||||||||||  ||||| |||||||||| ||||||||||| |||||||||||| | ||||| || ||||||||    
T  18196103 aagaagagcatgctaagcatttgaagattgttttgcaagtgctgaaagagaagaagctatatgctaaattgtcaaa 18196178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 2873173 - 2873295
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | || ||||||||| | ||||| || ||||| || ||||| ||  |||| |  |||||    
T  2873173 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaggagaagaagctttatgctaaattgtctaagtgtgaattttggttgaaagaagt 2873272  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||||||| ||||||    
T  2873273 gagtttccttggccatgttattt 2873295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 22435780 - 22435658
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||  ||||||||||||||||| ||||||||| | |||||||||||  | ||| | || || || || ||||||||| |||| |  || ||    
T  22435780 aagaagaacatgttgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatcctaaattatctaagtgtgagttctggttgaaagaggt 22435681  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  22435680 aagttttcttggccatgttattt 22435658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 22444178 - 22444056
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||  ||||||||||||||||| ||||||||| | |||||||||||  | ||| | || || || || ||||||||| |||| |  || ||    
T  22444178 aagaagaacatgttgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatcctaaattatctaagtgtgagttctggttgaaagaggt 22444079  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  22444078 aagttttcttggccatgttattt 22444056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 25114463 - 25114341
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | |||| ||| || || || ||||| ||| |||| |  || ||    
T  25114463 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgtcaaattatctaagtgtgaattctggttgaaagaggt 25114364  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  25114363 gagttttcttggccatgttattt 25114341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 128
Target Start/End: Original strand, 28281187 - 28281305
Alignment:
Q  10 agagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagt 109  Q
    |||||||||||| |||||||  ||||| ||||||||  | ||||| | |||||||||||||||  |||| |||||||| ||  || |||||||||| |||    
T  28281187 agagcatgcagaacatctgagaattgtgttgcaagttttgaaagaaaggaagttgtatgccaaactgtcgaaatgtgaattttggctaagtgaagtgagt 28281286  T
Q  110 tttcttggccatattattt 128  Q
    || ||||| || |||||||    
T  28281287 ttccttggtcacattattt 28281305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 19866595 - 19866476
Alignment:
Q  9 aagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaag 108  Q
    |||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| ||  | || ||  |||||||| |||| |  || |||||    
T  19866595 aagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaactatctaagcgtgagttctggttgaaagaggtaag 19866496  T
Q  109 ttttcttggccatattattt 128  Q
    ||||||||||||| ||||||    
T  19866495 ttttcttggccatgttattt 19866476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 15461203 - 15461133
Alignment:
Q  50 aaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcca 120  Q
    |||||||  |||||||||||||||||||| || || || ||| ||||||||||||| |||||||| |||||    
T  15461203 aaagagagaaagttgtatgccaagttgtcgaagtgcgatttctggttaagtgaagtgagttttctaggcca 15461133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 16380745 - 16380827
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagtt 90  Q
    ||||||||||| |||||| ||| |||||| ||||||||  | ||||||||  |||||| |||||||||||| || ||||||||    
T  16380745 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtt 16380827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 27189347 - 27189225
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| || |||||||||||||| || |||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  27189347 aagaagaacatgcggaacatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtccaagtgtgaattctggttgaaagaagt 27189248  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||||||| ||||||    
T  27189247 gagtttccttggccatgttattt 27189225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 27259893 - 27260015
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| || |||||||||||||| || |||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  27259893 aagaagaacatgcggaacatctgaagattgtcttacaagtgttgaaagagaagaaactttatgctaaattgtccaagtgtgaattctggttgaaagaagt 27259992  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| ||||||||| ||||||    
T  27259993 gagtttccttggccatgttattt 27260015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 22760825 - 22760950
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||| |||||| ||||| | || ||| ||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  22760825 aagaagagcatgctgagcatttgaagctggttttgtaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgaaagaagt 22760924  T
Q  106 aagttttcttggccatattatttgtg 131  Q
     || |||||||| ||| |||||||||    
T  22760925 gagctttcttggacatgttatttgtg 22760950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 23080378 - 23080326
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaa 60  Q
    ||||| ||||| |||||| |||||||||| ||||||||||| |||||||||||    
T  23080378 gaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaa 23080326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 25763606 - 25763713
Alignment:
Q  14 catgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttc 113  Q
    ||||| ||||||||||||||||| ||||||||| | |||||||  ||  ||||||| || || || || ||||| ||| |||| |  || ||||||||||    
T  25763606 catgctgagcatctgaagattgtcttgcaagtgttgaaagagataaaaatgtatgctaaattatctaattgtgaattctggttgaaagaggtaagttttc 25763705  T
Q  114 ttggccat 121  Q
    ||||||||    
T  25763706 ttggccat 25763713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 16648341 - 16648423
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagtt 90  Q
    ||||||||||| |||||| ||| |||||| ||||||||  | ||||||||  ||||||  ||||||||||| || ||||||||    
T  16648341 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagtt 16648423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 20634310 - 20634432
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| ||||| | || ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  20634310 aagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgaaagaagt 20634409  T
Q  106 aagttttcttggccatattattt 128  Q
     || |||||||| ||| ||||||    
T  20634410 gagctttcttggacatgttattt 20634432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 23086141 - 23086210
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagtt 75  Q
    ||||||| ||||| |||||| |||||||||| |||||||||||  | ||||||||| | ||||| |||||    
T  23086141 aagaagaacatgctgagcatttgaagattgttttgcaagtgctggaggagaagaagctttatgctaagtt 23086210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 18450388 - 18450292
Alignment:
Q  32 attgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 128  Q
    ||||| ||||||||||| || | ||||||||| ||||||||||| || || || || ||| |||| |  ||||  ||||||||||| ||||||||||    
T  18450388 attgttttgcaagtgctgaaggggaagaagttatatgccaagttatcgaagtgcgaattctggttgaacgaagggagttttcttggtcatattattt 18450292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 2500 - 2622
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||||||| | ||||||||| | ||||| | ||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  2500 aagaagagcatgcagagcatctgaagattttgttgcaagtgtttaaagaaaggaagttgtatgccaagttgtctaaatgtgaattctggttaagtgaagt 2599  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  2600 aagttttcttggccacattattt 2622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 10906 - 10784
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||| |||||||| | |||||||||||||||||| | ||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  10906 aagaagagcatacagagcatttaaagattgtattgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggttaagtgaagt 10807  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||| ||||    
T  10806 aagttttcttggccatatcattt 10784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 1773 - 1895
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||||||||||||  | ||||||||||||||||||||||| ||||| || ||||||||| |||||||||||||    
T  1773 aagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggttaagtgaagt 1872  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  1873 gagttttcttggccacattattt 1895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 28603 - 28481
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||| |||||||||||||||||| |||||| ||||||||| | ||||| ||||| ||||||||||||||||| |||||||| ||| |||||||||||||    
T  28603 aagaaaagcatgcagagcatctgatgattgtgttgcaagtgttgaaagaaaagaaattgtatgccaagttgtccaaatgtgaattctggttaagtgaagt 28504  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  28503 aagttttcttggccatattattt 28481  T

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Target: scaffold0133 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 29513 - 29635
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||||||| | ||||||||| | ||||| | ||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  29513 aagaagagcatgcagagcatctgaagattttgttgcaagtgtttaaagaaaggaagttgtatgccaagttgtctaaatgtgaattctggttaagtgaagt 29612  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  29613 aagttttcttggccacattattt 29635  T

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Target: scaffold0106 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 33412 - 33290
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| ||||| ||||||||||| || ||| | |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||    
T  33412 aagaagagcatgcagaacatctaaagattgtattacaggtgttgaaagagaagaagttgtatgccaagttgttaaaatgtgagttctagttaagtgaagt 33313  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  33312 aagttttcttggccacattattt 33290  T

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Target: scaffold0011 (Bit Score: 83; Significance: 2e-39; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 150647 - 150525
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||||||||||||  | ||||| |||||||||||||||||||||||||| ||||| ||| |||||||||| ||    
T  150647 aagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagaaaagaagttgtatgccaagttgtcaaagtgtgaattctggttaagtgaggt 150548  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  150547 aagttttcttggccacattattt 150525  T

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Target: scaffold0011; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 24761 - 24883
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| |||||||||| ||||||||| | |||||||||||||| ||||| || || ||||| ||||| ||| |||| |  || ||    
T  24761 aagaagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaagttatatgctaaattatcaaagtgtgaattctggttgaaagaggt 24860  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  24861 aagttttcttggccatgttattt 24883  T

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Target: scaffold0011; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 193949 - 194054
Alignment:
Q  23 catctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccata 122  Q
    ||||||| |||||| || |||||  | ||||| ||||||| |||||| |||||||| || ||||||||| ||||||||||||| |||||||||||||| |    
T  193949 catctgaggattgtgttacaagttttgaaagaaaagaagtcgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtgagttttcttggccaca 194048  T
Q  123 ttattt 128  Q
    ||||||    
T  194049 ttattt 194054  T

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Target: scaffold1477 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold1477
Description:

Target: scaffold1477; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 305 - 183
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||||||||||||  | ||||| |||||||||||||||||||||||||| ||||| ||| |||||||||| ||    
T  305 aagaagagcatgcagaacatctgaagattgtattgcaagtattgaaagaaaagaagttgtatgccaagttgtcaaagtgtgatttctggttaagtgatgt 206  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  205 tagttttcttggccacattattt 183  T

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Target: scaffold0180 (Bit Score: 79; Significance: 4e-37; HSPs: 3)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 33981 - 34103
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||||||| | |||||| | ||||||||| |||| || |||||| |||||||||||||||| |||||||| ||| |||||||||||||    
T  33981 aagaagagcatgcagagcatttaaagattatgttgcaagtgttaaaggaaaagaagatgtatgccaagttgtccaaatgtgaattctggttaagtgaagt 34080  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||||||||||    
T  34081 aagttttcttggccatattattt 34103  T

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Target: scaffold0180; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 468 - 590
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||| ||||| |||| |||||||||||||| |||||  |  | |||||||| ||||||||||| |||||||| || ||||||||| |||||||||||||    
T  468 aagaatagcattcagaacatctgaagattgtgttgcagattttgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagt 567  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  568 gagttttcttggccacattattt 590  T

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Target: scaffold0180; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 4788 - 4910
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||| ||||| |||| |||||||||||||| |||||  |  | |||||||| ||||||||||| |||||||| || ||||||||| |||||||||||||    
T  4788 aagaatagcattcagaacatctgaagattgtgttgcagattttgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagt 4887  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  4888 gagttttcttggccacattattt 4910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 79; Significance: 4e-37; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 24292 - 24170
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| |||||||||||||| ||||||||  ||||||| |||||||||||||| |||||||| || ||||||||| |||||||||||||    
T  24292 aagaggagcatgcagaacatctgaagattgtgttgcaagtattaaaagaaaagaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagt 24193  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  24192 aagttttcttggccacattattt 24170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 44645 - 44767
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||| || | |||||||||||||||||||||||  | ||||| || ||||||||||||||||||||||||||||| ||  |||||||||||||    
T  44645 aagaagagcatacaaaacatctgaagattgtattgcaagtattgaaagaaaataagttgtatgccaagttgtcaaaatgtgaattttggttaagtgaagt 44744  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||  |||||||    
T  44745 aagttttcttggccccattattt 44767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 77; Significance: 7e-36; HSPs: 3)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 31907 - 32027
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    |||||||||||||| ||||||| |||||||||||||||  | ||||||||||||||||||||||| |||||||| || |||||  ||||||||||||| |    
T  31907 gaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggttaagtgaagtga 32006  T
Q  108 gttttcttggccatattattt 128  Q
    |||||||||||||||||||||    
T  32007 gttttcttggccatattattt 32027  T

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Target: scaffold0076; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 55128 - 55250
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| |||||||||||||||||||||||  | ||||| |||||||||||||| |||||||| ||||  |||||  |||||||||||||    
T  55128 aagaggagcatgcagaacatctgaagattgtattgcaagttttgaaagaaaagaagttgtatgctaagttgtcgaaataagagttttggttaagtgaagt 55227  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  55228 aagttttcttggccacattattt 55250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 42334 - 42252
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagtt 90  Q
    ||||||||||| |||||| ||| |||||| ||||||||  | ||||||||  |||||| |||||||||||| || ||||||||    
T  42334 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtt 42252  T

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Target: scaffold0028 (Bit Score: 77; Significance: 7e-36; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 48744 - 48864
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    |||||||||||||| ||||||| |||||||||||||||  | ||||||||||||||||||||||| |||||||| || |||||  ||||||||||||| |    
T  48744 gaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaagaagttgtatgccaaattgtcaaagtgcgagttttggttaagtgaagtga 48843  T
Q  108 gttttcttggccatattattt 128  Q
    |||||||||||||||||||||    
T  48844 gttttcttggccatattattt 48864  T

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Target: scaffold0028; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 17011 - 16892
Alignment:
Q  9 aagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaag 108  Q
    |||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | |||||||| ||||| || ||||||||| |||| || ||||| ||    
T  17011 aagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgagagaagtgag 16912  T
Q  109 ttttcttggccatattattt 128  Q
    ||| ||||||||| ||||||    
T  16911 tttccttggccatgttattt 16892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 10549 - 10430
Alignment:
Q  9 aagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaag 108  Q
    |||| ||||| |||||||| |||||||| ||||||||| | |||||||||||  | |||||||| ||||| || ||||||||| |||| || ||||| ||    
T  10549 aagaacatgctgagcatctaaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgagagaagtgag 10450  T
Q  109 ttttcttggccatattattt 128  Q
    ||| ||||||||| ||||||    
T  10449 tttccttggccatgttattt 10430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 45229 - 45107
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| || |||||||||||||| ||||||||  | |||||||| ||  | |||||||| ||||| || ||||| ||| |||| |  || ||    
T  45229 aagaagaacatgctgatcatctgaagattgtcttgcaagtattgaaagagaaaaaactttatgccaaattgtctaagtgtgaattctggttgaaagaggt 45130  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  45129 gagttttcttggccatgttattt 45107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 36168 - 36069
Alignment:
Q  29 aagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 128  Q
    |||||||||||||||||  | ||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  36168 aagattgtattgcaagtattgaaagaaaagaagttgtatgccaagttgtcaaagtgtgagttctggttaagtgaagtaagttttcttggccatattattt 36069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1288 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 1082 - 1204
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||| ||||||| |||||||||||||||||||||||  |||| |||||||||||||||||||||||||| || ||||| ||  |||||||||||||    
T  1082 aagaagagaatgcagaacatctgaagattgtattgcaagtattaaaggagaagaagttgtatgccaagttgtcgaagtgtgaattttggttaagtgaagt 1181  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  1182 gagttttcttggccacattattt 1204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 11014 - 11136
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| ||||||| |||||||||||||||  | ||||||||||||||||||||||| |||||||||||||||||  || ||||||||||    
T  11014 aagaggagcatgcagaacatctgaggattgtattgcaagtatttaaagagaagaagttgtatgccaaattgtcaaaatgtgagttttggctaagtgaagt 11113  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||| ||||| ||||||||||    
T  11114 aagtttccttggtcatattattt 11136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 47262 - 47384
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||| ||||||||||||||||| | ||||| || ||||||||||| | ||||||||||||||| ||  |||||||||||||    
T  47262 aagatgagcatgcagagcatctgcagattgtattgcaagtgttgaaagaaaaaaagttgtatgcgacgttgtcaaaatgtgaattttggttaagtgaagt 47361  T
Q  106 aagttttcttggccatattattt 128  Q
    | |||||||||||||||||||||    
T  47362 aggttttcttggccatattattt 47384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 56075 - 56197
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| ||||||| ||||||||||||||| || |||||||| ||||||||||| |||||||| |||||||| ||| |||||||||||||    
T  56075 aagaggagcatgcagaacatctgaggattgtattgcaagtactgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagt 56174  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||| |||| |||||||    
T  56175 gagttttcttagccacattattt 56197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 4827 - 4705
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| ||||||||||||||||| |||||  | ||||| |||||||||||||| |||||||| || ||||||||| |||||||||||||    
T  4827 aagaagagcatgcagaacatctgaagattgtattacaagtattgaaagaaaagaagttgtatgctaagttgtcgaattgtgagttctggttaagtgaagt 4728  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  4727 cagttttcttggccacattattt 4705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 3181 - 3303
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||||||||||||||||||  | |||||||| ||||||||||| |||||||| || ||||||||| |||| ||||||||    
T  3181 aagaagagcatgcagagcatctgaagattgtattgcaagtattgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggtttagtgaagt 3280  T
Q  106 aagttttcttggccatattattt 128  Q
      ||||||||||||| |||||||    
T  3281 ttgttttcttggccacattattt 3303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 69404 - 69334
Alignment:
Q  50 aaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcca 120  Q
    |||||||  |||||||||||||||||||| || || ||||||  |||||||||||| |||||||| |||||    
T  69404 aaagagagaaagttgtatgccaagttgtcgaagtgcgagttcttgttaagtgaagtgagttttctaggcca 69334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 176572 - 176694
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||||||| | |||||||| ||| ||||| | || || ||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  176572 aagaagagcatgcagagcatttaaagattgtgttgtaagtgttgaatgaaaagaagttgtatgccaagttgtccaaatgtgaattctggttaagtgaagt 176671  T
Q  106 aagttttcttggccatattattt 128  Q
    || ||||||||||||||||||||    
T  176672 aaattttcttggccatattattt 176694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 262302 - 262180
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| ||||||| ||||||||||||||| || |||||||| ||||||||||| |||||||| |||||||| ||| |||||||||||||    
T  262302 aagaggagcatgcagaacatctgaggattgtattgcaagtactgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagt 262203  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  262202 gagttttcttggccacattattt 262180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 195318 - 195196
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| ||||||| ||||||||||||||| || |||||||| ||||||||||| |||||||| |||||||| ||| |||||||||||||    
T  195318 aagaggagcatgcagaacatctgaggattgtattgcaagtactgaaagagaaaaagttgtatgctaagttgtcgaaatgtgaattctggttaagtgaagt 195219  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  195218 gagttttcttggccacattattt 195196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 231 - 351
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    |||||||||||||| |||||||  ||||| ||||||||  | ||||||||||||||||||||||| ||||| || ||||||||| |||||||||||||||    
T  231 gaagagcatgcagaacatctgagaattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagttctggttaagtgaagtaa 330  T
Q  108 gttttcttggccatattattt 128  Q
    |||| ||||||||||||||||    
T  331 gtttccttggccatattattt 351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 20925 - 20805
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    |||||||||||||| ||||||| || ||||||||||||  | | ||||||||||||||||||||| ||||| || ||||||||| ||||||||||||| |    
T  20925 gaagagcatgcagaacatctgaggactgtattgcaagtattcatagagaagaagttgtatgccaaattgtcgaagtgtgagttctggttaagtgaagtga 20826  T
Q  108 gttttcttggccatattattt 128  Q
    |||||||||||||||||||||    
T  20825 gttttcttggccatattattt 20805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 25087 - 24967
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    |||||||||||||| ||||||| || ||||||||||||  | | ||||||||||||||||||||| ||||| || ||||||||| ||||||||||||| |    
T  25087 gaagagcatgcagaacatctgaggactgtattgcaagtattcatagagaagaagttgtatgccaaattgtcgaagtgtgagttctggttaagtgaagtga 24988  T
Q  108 gttttcttggccatattattt 128  Q
    |||||||||||||||||||||    
T  24987 gttttcttggccatattattt 24967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 9036 - 9158
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||| ||| | ||||||||| | ||||| ||||||||||||||||||||||| |||||||| ||| ||||| |||||||    
T  9036 aagaagagcatgcagagcatctgaaaattatgttgcaagtgttgaaagaaaagaagttgtatgccaagttgtccaaatgtgaattctggttatgtgaagt 9135  T
Q  106 aagttttcttggccatattattt 128  Q
      |||||||| ||||||||||||    
T  9136 gtgttttcttcgccatattattt 9158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 44871 - 44993
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| |||||| || | |||||||||||  | |||||||| ||||| || ||||| ||| |||| |  || ||    
T  44871 aagaagaacatgctgagcatctgaagattgtcttgcaaatgttgaaagagaagaaactttatgccaaattgtctaagtgtgacttctggttgaaagaggt 44970  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  44971 gagttttcttggccatgttattt 44993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 14278 - 14156
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||||||||| |||||| |  | ||||| |||||||||||||| |||||||| || ||||||||| |||||| ||||||    
T  14278 aagaagagcatgcagagcatctgaagattgtgttgcaaatattgaaagaaaagaagttgtatgctaagttgtcgaagtgtgagttctggttaattgaagt 14179  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  14178 gagttttcttggccacattattt 14156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 6038 - 6120
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagtt 90  Q
    ||||||||||| |||||| ||| |||||| ||||||||  | ||||||||  |||||| |||||||||||| || ||||||||    
T  6038 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtt 6120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 99790 - 99912
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||| |||||| | ||||||||||| ||||| ||||| |||||||| || ||||||||| |||||||||||||    
T  99790 aagaagagcatgcagaacatctgaagattgtgttgcaaattctaaaagagaaaaagttatatgctaagttgtcgaagtgtgagttctggttaagtgaagt 99889  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| ||||| |||||||    
T  99890 gagttttctgggccacattattt 99912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 250698 - 250576
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||||||||||||||||||||| | || || |||| ||||||||| |||||||| |||||||||||| |||||||||||||    
T  250698 aagaggagcatgcagagcatctgaagattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttgtcgaaatgtgagttctggttaagtgaagt 250599  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| || || |||||||    
T  250598 gagttttctgggtcacattattt 250576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 114635 - 114515
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    |||||||||||||| ||||||| |||||||||||||||  | ||||||||||| ||||||||||| ||||| || || |||||| |||||| |||||| |    
T  114635 gaagagcatgcagaacatctgatgattgtattgcaagtattgaaagagaagaaattgtatgccaaattgtcgaagtgcgagttctggttaaatgaagtga 114536  T
Q  108 gttttcttggccatattattt 128  Q
    |||||||||||||||||||||    
T  114535 gttttcttggccatattattt 114515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 108047 - 108161
Alignment:
Q  14 catgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttc 113  Q
    ||||| ||||||||||||||||| ||||||||| | |||||||||||  | |||||||| ||||| || ||||| ||| |||| |  || ||||||||||    
T  108047 catgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaattctggttgaaagaggtaagttttc 108146  T
Q  114 ttggccatattattt 128  Q
    |||||||| ||||||    
T  108147 ttggccatgttattt 108161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1373 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold1373
Description:

Target: scaffold1373; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 1062 - 1184
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||||  ||||| ||||||||  | ||||| |||| ||||||||| ||||||||||||||||||||| |||||||||||||    
T  1062 aagaggagcatgcagagcatctgagaattgtgttgcaagttttgaaagaaaagaggttgtatgcaaagttgtcaaaatgtgagttctggttaagtgaagt 1161  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| || ||||||||||    
T  1162 gagttttctgggtcatattattt 1184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 723 - 602
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| |||||||||||||||||||||||| | ||||| |||||||||||||| || ||||| |||||||||||  || ||||||||||    
T  723 aagaggagcatgcagaacatctgaagattgtattgcaagtgttgaaagaaaagaagttgtatgctaaattgtcgaaatgtgagttttgg-taagtgaagt 625  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||| ||||| |||||||    
T  624 aagttttctgggccacattattt 602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 31547 - 31669
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||||||||| ||||||||||  | ||||| |||||||||||||| ||| ||||||| ||||||||| |||||||||||||    
T  31547 aagaggagcatgcagagcatctgaagattatattgcaagtcttgaaagaaaagaagttgtatgcaaagctgtcaaagtgtgagttctggttaagtgaagt 31646  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| || || |||||||    
T  31647 gagttttctgggtcacattattt 31669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 37726 - 37604
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||||||  ||||  | ||||| |||||||||||||| ||||||||||| ||||||||  |||||||| ||||    
T  37726 aagaagagcatgcagaacatctgaagattgtattagaagtattgaaagaaaagaagttgtatgctaagttgtcaaagtgtgagttttggttaagtaaagt 37627  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  37626 gagttttcttggccacattattt 37604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 120
Target Start/End: Complemental strand, 42995 - 42881
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||| ||||| |||||| |  | |||||||||||||||||||| |||||||| || ||||||||| |||||||||||||    
T  42995 aagaagagcatgcagaacatctgaaaattgtgttgcaaatattgaaagagaagaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagt 42896  T
Q  106 aagttttcttggcca 120  Q
    ||| |||||||||||    
T  42895 aagctttcttggcca 42881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 5190 - 5068
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| |||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||| ||||||||| |||| | ||| ||    
T  5190 aagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagttatatgcaaagttgtcaaagtgtgagttctggttgaatgaggt 5091  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  5090 gagttttcttggccatgttattt 5068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 67; Significance: 6e-30; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 28700 - 28578
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| ||||||||||| || ||| ||||| | ||||| |||||||||| ||| ||||||||||||||||||||| |||||  ||||||    
T  28700 aagaagagcatgcagaacatctgaagatcgtcttgaaagtgttgaaagaaaagaagttgtctgcgaagttgtcaaaatgtgagttctggttagatgaagt 28601  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||| ||||||| |||||||    
T  28600 aagttttgttggccacattattt 28578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 50408 - 50530
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||| || |||||||||||||| ||||||||| | |||||||| ||||||||||| |||||||| || || ||||||  ||||||||||||    
T  50408 aagaagagcatgcggaacatctgaagattgtgttgcaagtgttgaaagagaaaaagttgtatgctaagttgtcgaagtgcgagttctagttaagtgaagt 50507  T
Q  106 aagttttcttggccatattattt 128  Q
     || |||||||||||||||||||    
T  50508 tagctttcttggccatattattt 50530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 59442 - 59564
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||| || |||||||||||||| ||||||||| | |||||||| ||||||||||| |||||||| || || ||||||  ||||||||||||    
T  59442 aagaagagcatgcggaacatctgaagattgtgttgcaagtgttgaaagagaaaaagttgtatgctaagttgtcgaagtgcgagttctagttaagtgaagt 59541  T
Q  106 aagttttcttggccatattattt 128  Q
     || |||||||||||||||||||    
T  59542 tagctttcttggccatattattt 59564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 65830 - 65952
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||| || |||||||||||||| ||||||||| | |||||||| ||||||||||| |||||||| || || ||||||  ||||||||||||    
T  65830 aagaagagcatgcggaacatctgaagattgtgttgcaagtgttgaaagagaaaaagttgtatgctaagttgtcgaagtgcgagttctagttaagtgaagt 65929  T
Q  106 aagttttcttggccatattattt 128  Q
     || |||||||||||||||||||    
T  65930 tagctttcttggccatattattt 65952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 67; Significance: 6e-30; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 45628 - 45749
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||| | |||||||||||||| || |||||  | |||||||||||||||||||| || ||||| || ||||||||| |||||||||||||    
T  45628 aagaagagcatgcaaaacatctgaagattgtgttacaagttttgaaagagaagaagttgtatgctaa-ttgtcgaagtgtgagttctggttaagtgaagt 45726  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  45727 aagttttcttggccacattattt 45749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 40566 - 40683
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  ||||||||||||||| | || || |||| ||||||||| ||||| ||||||||||||||| |||||| |||||||||||    
T  40566 gagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagtt 40665  T
Q  111 ttcttggccatattattt 128  Q
    |||| || || |||||||    
T  40666 ttctgggtcacattattt 40683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 3992 - 3870
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| |||||||||||||||||||||| |||||||||||| | ||||| || |||||||| ||||| ||| |||| |  || ||    
T  3992 aagaagaacatgctgagcatttgaagattgtattgcaagtgctgaaagagaagaagctatatgctaaattgtcaaagtgtgaattctggttgaaagaggt 3893  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||| || ||||||    
T  3892 gagttttcttggcaatgttattt 3870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 324782 - 324660
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||| ||| ||||||||||||||||||||| |  | |||||||| ||||||||||| |||| ||| || ||||| ||| |||||||||||||    
T  324782 aagaagagcatgtagaacatctgaagattgtattgcaaattttgaaagagaaaaagttgtatgctaagtcgtcgaagtgtgaattctggttaagtgaagt 324683  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||||||| |||||||    
T  324682 aagttttcttggccacattattt 324660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 201696 - 201818
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| |||||||| ||| ||||| |||| ||||||||| | || || |||||| |||||||||| | ||| |||||||| ||| |||||||||||||    
T  201696 aagaagaacatgcagaacatttgaaggttgtgttgcaagtgttgaaggaaaagaagctgtatgccaaatggtccaaatgtgaattctggttaagtgaagt 201795  T
Q  106 aagttttcttggccatattattt 128  Q
    || ||||||||||||||||||||    
T  201796 aaattttcttggccatattattt 201818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 41774 - 41655
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||||||||||||||||||||| ||||||||| | || || ||||||||||||| |||| |||| || ||||| ||| ||||| | |||||    
T  41774 aagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaa-gaaaagaagttgtatgacaagctgtccaagtgtgaattctggttacgcgaagt 41676  T
Q  106 aagttttcttggccatattat 126  Q
    |||||||||||||||||||||    
T  41675 aagttttcttggccatattat 41655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 51573 - 51627
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaa 60  Q
    |||||||  |||| ||||||||||||||||| ||||||||| | |||||||||||    
T  51573 aagaagaagatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaa 51627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1646 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1646
Description:

Target: scaffold1646; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 1402 - 1280
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| ||||||| ||||||||| || ||  | ||||| |||||||||||||| || ||||||||||| |||||  |||||||||||||    
T  1402 aagaggagcatgcagaacatctgaggattgtattacaggttttgaaagaaaagaagttgtatgctaaattgtcaaaatgcgagttttggttaagtgaagt 1303  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||| ||||||||||||||||    
T  1302 aagtttccttggccatattattt 1280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 10117 - 10239
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| ||||||| |||||| || |  ||  | ||||| ||||||||||||||||| |||||||||||||||||  |||||||||||||    
T  10117 aagaggagcatgcagaacatctgaggattgtgttacgtgttttgaaagaaaagaagttgtatgccaaattgtcaaaatgtgagttttggttaagtgaagt 10216  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||| ||||||||||||||||    
T  10217 aagtttccttggccatattattt 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 53123 - 53001
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||| |||||| |  | |||||||| ||||||||||  |||||||| || ||||||||| |||||||||||||    
T  53123 aagaagagcatgcagaacatctgaagattgtgttgcaaatattgaaagagaaaaagttgtatgttaagttgtcgaagtgtgagttctggttaagtgaagt 53024  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| ||||| |||||||    
T  53023 gagttttctgggccacattattt 53001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 80059 - 80181
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||| ||||||||| ||||||||| || ||  | ||||| |||||||||||||| || ||||||||||| |||||  |||||||||||||    
T  80059 aagaggagcatgcaaagcatctgaggattgtattacaggttttgaaagaaaagaagttgtatgctaaattgtcaaaatgcgagttttggttaagtgaagt 80158  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||| ||||||||||||||||    
T  80159 aagtttccttggccatattattt 80181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 16384 - 16499
Alignment:
Q  13 gcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtttt 112  Q
    ||||| ||| ||||||||||| ||||||||| |  | || || |||||||||||||| |||||||| || ||||||||| ||||||||||||||||||||    
T  16384 gcatgtagaacatctgaagatagtattgcaaatattgaaggaaaagaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagtaagtttt 16483  T
Q  113 cttggccatattattt 128  Q
    |||||||| |||||||    
T  16484 cttggccacattattt 16499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 9016 - 9119
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  ||||||||||||||| | || || |||| ||||||||| ||||| ||||||||||||||| |||||| |||||||||||    
T  9016 gagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgctaagttatcaaaatgtgagttctggttaaatgaagtaagtt 9115  T
Q  111 ttct 114  Q
    ||||    
T  9116 ttct 9119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 14546 - 14424
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||||||||| |||||| |||||||||| ||||||||||| |||||||||||| | ||| | || |||||||| ||||||||| |||| | ||| ||    
T  14546 aagaagagcatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagctatattctaaattgtcaaagtgtgagttctggttgaatgaggt 14447  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  14446 tagttttcttggccatgttattt 14424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 245 - 323
Alignment:
Q  50 aaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 128  Q
    ||||| ||||||||||||||||||||||| |||||||| ||  ||||||||||||||||||||||||||||||||||||    
T  245 aaagaaaagaagttgtatgccaagttgtccaaatgtgaattttggttaagtgaagtaagttttcttggccatattattt 323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 9685 - 9807
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||| |||| ||| |||||||||| |||||| |  | |||||||| ||||||||||| |||||||| || ||||||||| |||||||||||||    
T  9685 aagaggagcatacagaacatttgaagattgtgttgcaaattttgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagt 9784  T
Q  106 aagttttcttggccatattattt 128  Q
    ||| ||||||||||| |||||||    
T  9785 aagatttcttggccacattattt 9807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 19899 - 20021
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||| |||| ||| |||||||||| |||||| |  | |||||||| ||||||||||| |||||||| || ||||||||| |||||||||||||    
T  19899 aagaggagcatacagaacatttgaagattgtgttgcaaattttgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagt 19998  T
Q  106 aagttttcttggccatattattt 128  Q
    ||| ||||||||||| |||||||    
T  19999 aagctttcttggccacattattt 20021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 38 - 128
Target Start/End: Original strand, 23339 - 23429
Alignment:
Q  38 ttgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 128  Q
    ||||||||| | || || |||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  23339 ttgcaagtgttgaaggaaaagaaggtgtatgccaagttgtccaaatgtgaattctggttaagtgaagtaagttttcttggccatattattt 23429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 9139 - 9017
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||| || |||||  | |||||||| ||||||| ||| |||||||| || |||||||||  ||||||||||||    
T  9139 aagaagagcatgcagaacatctgaagattgtgttacaagttttgaaagagaaaaagttgtgtgctaagttgtcgaagtgtgagttctagttaagtgaagt 9040  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| ||||| |||||||    
T  9039 gagttttctgggccacattattt 9017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 120
Target Start/End: Original strand, 12527 - 12641
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||| |||||| |  | |||||||| ||||||||||| ||||||||||| ||| ||||| ||| |||||||||    
T  12527 aagaagagcatgcagaacatctgaagattgtgttgcaattattgaaagagaaaaagttgtatgctaagttgtcaaagtgtaagttctggtaaagtgaagt 12626  T
Q  106 aagttttcttggcca 120  Q
     |||||||| |||||    
T  12627 gagttttctgggcca 12641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 504 - 626
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||| ||||| |||| |||||||||||||| |||||  |  | |||||||| ||||||||||| |||||||| || ||||||||| |||||||||||||    
T  504 aagaatagcattcagaacatctgaagattgtgttgcagattttgaaagagaaaaagttgtatgctaagttgtcgaagtgtgagttctggttaagtgaagt 603  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||||||||| |||||||    
T  604 gagttttcttggccacattattt 626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 14946 - 15063
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||||||||||||||  ||||||||||||||| | || || |||| ||||||||| |||||||| ||||||||||||  |||||||||||| || |    
T  14946 gagcatgcagagcatctgagaattgtattgcaagtgttgaaggaaaagaggttgtatgcaaagttgtcgaaatgtgagttctagttaagtgaagtgagct 15045  T
Q  111 ttcttggccatattattt 128  Q
    |||| || || |||||||    
T  15046 ttctgggtcacattattt 15063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 19862 - 19967
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||||||||||| |||||||||||||||||||||||  | |||||||| |||||||||||||||||||| ||||     ||  |||||||||||||    
T  19862 aagaagagcatgcagaacatctgaagattgtattgcaagtattcaaagagaataagttgtatgccaagttgtctaaat-----ttttggttaagtgaagt 19956  T
Q  106 aagttttcttg 116  Q
    |||||||||||    
T  19957 aagttttcttg 19967  T

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Target: scaffold0042 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 22769 - 22661
Alignment:
Q  20 gagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcc 119  Q
    |||||| |||||||||| ||||||||||  || || |||||||| ||||||||||||||||| ||||||||| |||| | ||| ||||||||||||||||    
T  22769 gagcatttgaagattgttttgcaagtgccgaaggaaaagaagttatatgccaagttgtcaaagtgtgagttctggttgaatgaggtaagttttcttggcc 22670  T
Q  120 atattattt 128  Q
    || ||||||    
T  22669 atgttattt 22661  T

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Target: scaffold0042; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 38048 - 38170
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || || || || ||||||||| |||| |  || ||    
T  38048 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaggt 38147  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  38148 aagttttcttggccatgttattt 38170  T

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Target: scaffold0431 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 9444 - 9322
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | |||||||| ||||| || ||||||||| |||| |  |||||    
T  9444 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgccaaattgtctaagtgtgagttctggttgaaagaagt 9345  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  9344 gagttttcttggccatgttattt 9322  T

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Target: scaffold0213 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 50 - 128
Target Start/End: Original strand, 4608 - 4686
Alignment:
Q  50 aaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 128  Q
    ||||| ||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||| ||||||||||    
T  4608 aaagaaaagaagttgtatgccaaattgtcaaaatgtgagttttggttaagtgaagtaagtttccttggtcatattattt 4686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 10 - 128
Target Start/End: Complemental strand, 29007 - 28889
Alignment:
Q  10 agagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagt 109  Q
    ||||||||||||||| ||||  ||||| ||||||||  | ||||| |||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||     
T  29007 agagcatgcagagcacctgagaattgtgttgcaagttttgaaagaaaagaggttgtatgcgaagttgtcaaaatgtgagttctggttaagtgaagtgagc 28908  T
Q  110 tttcttggccatattattt 128  Q
    ||||| || || |||||||    
T  28907 tttctgggtcacattattt 28889  T

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Target: scaffold0080 (Bit Score: 55; Significance: 9e-23; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 11467 - 11589
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | ||||||||||| || ||||| || ||||| || ||||| ||| |||| |  |||||    
T  11467 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaattttatgctaaattgtctaagtgtgaattctggttgaaggaagt 11566  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  11567 aagttttcttggccatgttattt 11589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 30960 - 30838
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||| ||| ||||||| |||||  | ||||| || || || || ||||||||| |||| |  || ||    
T  30960 aagaagaacatgctgagcatctgaagattgtcttgcaggtgttaaaagaaaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaggt 30861  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  30860 cagttttcttggccatgttattt 30838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 36426 - 36303
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||| ||| ||||||| |||||  | ||||| || || || || ||||||||| |||| |  || ||    
T  36426 aagaagaacatgctgagcatctgaagattgtcttgcaggtgttaaaagaaaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaggt 36327  T
Q  106 aa-gttttcttggccatattattt 128  Q
    || ||||| |||||||| ||||||    
T  36326 aaggttttgttggccatgttattt 36303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 21198 - 21076
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| |||||||||||||||||||||||  | ||||| || ||||||||||| || ||||  |||||| ||||  |||||||| ||||    
T  21198 aagaggagcatgcagaacatctgaagattgtattgcaagttttgaaagaaaataagttgtatgctaaattgttgaaatgttagttttggttaagtaaagt 21099  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||| || |||||||    
T  21098 aagttttcttggtcacattattt 21076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 27484 - 27597
Alignment:
Q  14 catgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttc 113  Q
    ||||| |||||| |||  ||||| ||||||||||| |||||||||||||| ||||||||||| ||||| || || ||| |||| |  | ||| |||||||    
T  27484 catgccgagcatttgagaattgttttgcaagtgctgaaagagaagaagttatatgccaagttatcaaagtgagaattctggttgaacg-agtgagttttc 27582  T
Q  114 ttggccatattattt 128  Q
    |||| ||||||||||    
T  27583 ttggtcatattattt 27597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 55; Significance: 9e-23; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 10969 - 11091
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| ||| |||||| ||||||||||| || ||||||||| | ||||| ||||||||||| |||||  || |||| | ||||||    
T  10969 aagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaagaagctttatgctaagttgtcaaagtgtgaactctggttgaatgaagt 11068  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  11069 aagttttcttggccatgttattt 11091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 17161 - 17283
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| ||| |||||| ||||||||||| || ||||||||| | ||||| ||||||||||| |||||  || |||| | ||||||    
T  17161 aagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaagaagctttatgctaagttgtcaaagtgtgaactctggttgaatgaagt 17260  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  17261 aagttttcttggccatgttattt 17283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 24542 - 24648
Alignment:
Q  22 gcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccat 121  Q
    |||| |||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||||| ||| |||| | ||| || |||||||| ||||||    
T  24542 gcatttgaagattgttttgcaagtgctgaaagagaagaagttatatgctaagttgtcaaaatgtgaattctggttgaatgaggtgagttttctaggccat 24641  T
Q  122 attattt 128  Q
     ||||||    
T  24642 gttattt 24648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1715 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold1715
Description:

Target: scaffold1715; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 1030 - 922
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| |||||||||||||||||||  ||||||||||||||  | ||||| ||||  |||||||| ||| |||||||||||||||||  ||||||||||||    
T  1030 aagaggagcatgcagagcatctgagaattgtattgcaagttttgaaagaaaagagattgtatgcaaagctgtcaaaatgtgagttctagttaagtgaagt 931  T
Q  106 aagttttct 114  Q
     ||||||||    
T  930 gagttttct 922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 6373 - 6481
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||| |||||||  ||||||||||| ||  | ||||| |||||||||||||| ||||||| ||||||||||||  |||||||||||||    
T  6373 aagaggagcatgcagaacatctgagaattgtattgcacgttttgaaagaaaagaagttgtatgcaaagttgttaaaatgtgagttatggttaagtgaagt 6472  T
Q  106 aagttttct 114  Q
     ||||||||    
T  6473 gagttttct 6481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 2075 - 2199
Alignment:
Q  4 tcaagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaa 103  Q
    ||||||||| ||||  |||||| |||||||||| ||||||||||| || |||||||||||  |||||||||||||||| ||||| ||| |||| | |||     
T  2075 tcaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaagaagttaaatgccaagttgtcaaagtgtgaattctggttgaatgag 2174  T
Q  104 gtaagttttcttggccatattattt 128  Q
    || ||||||||||| ||| ||||||    
T  2175 gtgagttttcttggtcatgttattt 2199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 6117 - 6239
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||  |||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||| |||| | ||| ||    
T  6117 aagaagaacatgctgagcaattgaagattgttttgcaagtgctgaaagagaagaagttatatgctaagttgtcaaagtgtgaattctggttgaatgaggt 6216  T
Q  106 aagttttcttggccatattattt 128  Q
     | ||||||||| ||| ||||||    
T  6217 catttttcttggtcatgttattt 6239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 40231 - 40109
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  40231 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 40132  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  40131 aagttttcttggccatgttattt 40109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 14353 - 14475
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||||||  |||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || || || || ||||| ||| | || |  |||||    
T  14353 aagaagaatatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattttctaagtgtgaattctgtttgaaggaagt 14452  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  14453 aagttttcttggccatgttattt 14475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 44861 - 44739
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||| | |||||||  ||| ||||||||||| | || || |||| ||||||||| ||| ||||||||||||||||| |||||||||||||    
T  44861 aagaggagcatgcaaaacatctgagaattatattgcaagtgttgaaggaaaagaggttgtatgctaagctgtcaaaatgtgagttctggttaagtgaagt 44762  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| || || |||||||    
T  44761 gagttttctaggtcacattattt 44739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 115209 - 115331
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| |||||||||| ||||||||||| || |||||| |||| ||||||||||||||||| ||||| ||  |||| |  || ||    
T  115209 aagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaggagaagtagttatatgccaagttgtcaaagtgtgaattttggttgaaagaggt 115308  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  115309 gagttttcttggccatgttattt 115331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 59 - 128
Target Start/End: Original strand, 5974 - 6043
Alignment:
Q  59 aagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 128  Q
    |||||||||||||||||||| || || |||||| ||||||||||||| ||||||||||||||||||||||    
T  5974 aagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttcttggccatattattt 6043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 22428 - 22535
Alignment:
Q  21 agcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcca 120  Q
    ||||| |||||||||| |||||||||||  ||||||| | ||| ||||||||||||||||| ||||| ||| |||| | ||| || |||||| |||||||    
T  22428 agcatttgaagattgttttgcaagtgctgcaagagaaaacgttatatgccaagttgtcaaagtgtgaattctggttgaatgaggtgagtttttttggcca 22527  T
Q  121 tattattt 128  Q
    ||||||||    
T  22528 tattattt 22535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1985 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold1985
Description:

Target: scaffold1985; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 568 - 690
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| ||||||||||  |||||||| |||||||||||||  | ||||| || || ||||| ||||||||| || | |  |||||    
T  568 aagaagaacatgctgagcatttgaagattgtcctgcaagtgttaaaagagaagaaactttatgctaaattatcaaagtgtgagttctggctgaaagaagt 667  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  668 aagttttcttggccatgttattt 690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 4272 - 4150
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || || || || ||||||||| |||| |  || ||    
T  4272 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaggt 4173  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  4172 aagttttcttggccatgttattt 4150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 14707 - 14829
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||  |||||| |||||||||| ||||||||||| |||||||||||||| ||||| || |||||||| ||||| |||  ||| |  || ||    
T  14707 aagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaagagaagaagttatatgctaaattgtcaaagtgtgaattctagttgaaagaggt 14806  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  14807 gagttttcttggccatgttattt 14829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 21920 - 21842
Alignment:
Q  50 aaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 128  Q
    ||||| ||||||||||| ||||| |||||||||||||||||   |||||||||||||||||| ||||| ||||||||||    
T  21920 aaagaaaagaagttgtaagccaaattgtcaaaatgtgagttttagttaagtgaagtaagtttccttggtcatattattt 21842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 9262 - 9384
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||  |||||| ||| |||||| ||||||||||| || ||||||||||| ||||||||| ||||||| ||||| ||| ||||   ||| ||    
T  9262 aagaagaacatgttgagcatttgaggattgttttgcaagtgctgaaggagaagaagttatatgccaagctgtcaaagtgtgaattctggttggatgaggt 9361  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  9362 gagttttcttggccatgttattt 9384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 20680 - 20558
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| ||| |||||||||  | ||||| || || || || ||||||||| || | |  |||||    
T  20680 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttaagagagaagaaactttatgctaaattatctaagtgtgagttctggatgaaagaagt 20581  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  20580 aagttttcttggccatgttattt 20558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 36104 - 35982
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| ||| |||||||||  | ||||| || || || || ||||||||| || | |  |||||    
T  36104 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttaatagagaagaaactttatgctaaattatctaagtgtgagttctggatgaaagaagt 36005  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  36004 aagttttcttggccatgttattt 35982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 16236 - 16114
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  ||| |    
T  16236 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaaatttatgctaacttgtctaagtgtgaattctggttgaaagaatt 16137  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  16136 aagttttcttggccatgttattt 16114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 2499 - 2376
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagtt-gtcaaaatgtgagttccggttaagtgaag 104  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||| ||  | ||||| || || ||| || ||||| ||| |||| |  |||     
T  2499 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaataacctttatgctaacttggtctaagtgtgaattctggttgaaagaat 2400  T
Q  105 taagttttcttggccatattattt 128  Q
    ||||||||||||||||| ||||||    
T  2399 taagttttcttggccatgttattt 2376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 297 - 417
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    ||||| ||||| |||||| |||||| ||| ||||||||| | |||||||||||| | ||||| || |||||||| ||||| ||| |||| | ||| || |    
T  297 gaagaacatgctgagcatttgaagactgtgttgcaagtgttgaaagagaagaagctttatgctaaattgtcaaagtgtgaattctggttgaatgaggtga 396  T
Q  108 gttttcttggccatattattt 128  Q
    |||||||||||||| ||||||    
T  397 gttttcttggccatgttattt 417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 15449 - 15564
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| || || |||||| |||||||||| |||||||||||||||||||| ||||| ||||| || |||||||| ||||| |||  ||| |  || ||    
T  15449 aagaagaacaagctgagcatttgaagattgttttgcaagtgctaaaagagaaaaagttatatgctaaattgtcaaagtgtgaattctagttgaaagaggt 15548  T
Q  106 aagttttcttggccat 121  Q
     |||||||||||||||    
T  15549 gagttttcttggccat 15564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 16955 - 16880
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaa 81  Q
    ||||||| ||||| |||||| |||||||||| ||||||||| | |||||||||||||| |||||||| ||||||||    
T  16955 aagaagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaagttatatgccaaattgtcaaa 16880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 1917 - 1839
Alignment:
Q  50 aaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 128  Q
    |||||||  |||||||||||||||||||| || || |||||| ||||||||||||| |||||||| ||||| |||||||    
T  1917 aaagagagaaagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagttttctaggccacattattt 1839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 2977 - 2855
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| || ||| |||||||| | ||||||||||| |||||||||||||| |||||  | |||||||| ||||| ||| |||| | ||| ||    
T  2977 aagaagaacatgctgaacatttgaagattattttgcaagtgctgaaagagaagaagttatatgctcaattgtcaaagtgtgaattctggttgaatgaggt 2878  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||| | ||||||||||||||    
T  2877 gagtttccgtggccatattattt 2855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 9016 - 8894
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  9016 aagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaagt 8917  T
Q  106 aagttttcttggccatattattt 128  Q
     |||||||| |||||| ||||||    
T  8916 gagttttctaggccatgttattt 8894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 23302 - 23424
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| || |||||| | |||||||||||  | ||||||||  |||| || ||||| ||| |||| |  |||||    
T  23302 aagaagaacatgctgagcatctgaagattgtcttacaagtgttgaaagagaagaaactttatgccaaactgtctaagtgtgaattctggttgaaagaagt 23401  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  23402 gagttttcttggccatgttattt 23424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 120
Target Start/End: Complemental strand, 25191 - 25077
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    |||| ||||||||||||||  |||||||||| |||||  |  | |||||||  |||||||||||||||||||| || || |||||| |||||| ||||||    
T  25191 aagaggagcatgcagagcacttgaagattgtgttgcagattttgaaagagagaaagttgtatgccaagttgtcgaagtgggagttctggttaactgaagt 25092  T
Q  106 aagttttcttggcca 120  Q
     |||||||| |||||    
T  25091 gagttttctaggcca 25077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 7315 - 7437
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| |||||| ||| ||||||||| | |||||||||||  | ||||| || |||||||| ||||| ||| |||| | ||| ||    
T  7315 aagaagaacatgctgagcatttgaagactgttttgcaagtgttgaaagagaagaaactttatgctaaattgtcaaagtgtgaattctggttgaatgaggt 7414  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  7415 gagttttcttggccatgttattt 7437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 3581 - 3703
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||| | ||||||||| | |||||||||||  | ||||| || || || || ||||||||| |||| |  || ||    
T  3581 aagaagaacatgctgagcatctgaagattatcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgagttctggttgaaagaggt 3680  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  3681 aagttttcttggccatgttattt 3703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 120
Target Start/End: Original strand, 217648 - 217762
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||  |||||| |||||||||| ||||||||||| |||||||||||| | ||||  || |||||||| |||||||||  ||| | ||| ||    
T  217648 aagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaagagaagaagctatatgttaaattgtcaaagtgtgagttctagttgaatgaggt 217747  T
Q  106 aagttttcttggcca 120  Q
     ||||||||||||||    
T  217748 gagttttcttggcca 217762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 84752 - 84869
Alignment:
Q  11 gagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagtt 110  Q
    |||||||| |||||| |||  ||||| ||||||||||| |||||||||||||| ||||||||||| ||||| || || ||| |||| |   |||| ||||    
T  84752 gagcatgccgagcatttgagaattgttttgcaagtgctgaaagagaagaagttatatgccaagttatcaaagtgcgaattctggttgaacaaagtgagtt 84851  T
Q  111 ttcttggccatattattt 128  Q
    | ||||| ||||||||||    
T  84852 tccttggtcatattattt 84869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 268642 - 268564
Alignment:
Q  50 aaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 128  Q
    |||||||  |||||||||||||||||||| || || |||||| ||||||||||||| ||||| || |||||| ||||||    
T  268642 aaagagagaaagttgtatgccaagttgtcgaagtgcgagttctggttaagtgaagtgagtttcctaggccatgttattt 268564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2111 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold2111
Description:

Target: scaffold2111; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 817 - 937
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    |||||||| ||||| || | ||||||||| |||||  |  | |||||||| ||||||||||||||||| || || || | |||| ||||||| ||||| |    
T  817 gaagagcacgcagaacaccagaagattgtgttgcagattttgaaagagaaaaagttgtatgccaagttttcgaagtgcgggttctggttaagggaagtga 916  T
Q  108 gttttcttggccatattattt 128  Q
     ||||||||||||||||||||    
T  917 attttcttggccatattattt 937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0739 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 1130 - 1008
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | ||||| |||||  | ||||| ||  | || || ||||||||| |||| |  || ||    
T  1130 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagaaaagaaactttatgctaaactatctaagtgtgagttctggttgaaagaggt 1031  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  1030 aagttttcttggccatgttattt 1008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 7921 - 8043
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| ||  | || || ||||||||| |||| |  || ||    
T  7921 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaactatctaagtgtgagttctggttgaaagaggt 8020  T
Q  106 aagttttcttggccatattattt 128  Q
    ||||||||||| |||| ||||||    
T  8021 aagttttcttgcccatgttattt 8043  T

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Target: scaffold0215 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 28799 - 28921
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||  | ||||| || || || || ||| ||||  |||| |  || ||    
T  28799 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtaagttatggttgaaagaggt 28898  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  28899 aagttttcttggccatgttattt 28921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 28691 - 28745
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaa 60  Q
    ||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||    
T  28691 aagaagaacatgctgagcatctgaagattgtcttgcaagtgttgaaagagaagaa 28745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 58093 - 57971
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| | ||||||||||||||| || |||||| | |||||||||||  | ||||| || ||||| || ||||| ||| |||| |  || ||    
T  58093 aagaagaacatgctgtgcatctgaagattgtcttccaagtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaattctggttgaaagaggt 57994  T
Q  106 aagttttcttggccatattattt 128  Q
    |||||||||||||||| ||||||    
T  57993 aagttttcttggccatgttattt 57971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 195715 - 195830
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||||||||| |||| ||||||||| | |||||||||||  | ||||| ||  | || || ||||||||| |||| |  || ||    
T  195715 aagaagaacatgctgagcatctgaaggttgtcttgcaagtgttgaaagagaagaaactttatgctaaactatctaagtgtgagttctggttgaaagaggt 195814  T
Q  106 aagttttcttggccat 121  Q
    ||||||||||||||||    
T  195815 aagttttcttggccat 195830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 16215 - 16315
Alignment:
Q  15 atgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttct 114  Q
    |||| |||||| |||||||| | ||||||||| | || ||||||||||| ||||| ||||||||||| ||||| ||| |||| | ||| |||||||||||    
T  16215 atgctgagcatttgaagatttt-ttgcaagtgttcaaggagaagaagttatatgctaagttgtcaaagtgtgaattctggttgaatgaggtaagttttct 16313  T
Q  115 tg 116  Q
    ||    
T  16314 tg 16315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 86824 - 86725
Alignment:
Q  29 aagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 128  Q
    |||| ||| ||||||||||| || ||||| ||||| |||||| |||| || || || || ||| |||| |  ||||||||||||||||||||||||||||    
T  86824 aagaatgttttgcaagtgctgaaggagaataagttatatgcctagttatcgaagtgcgaattctggttgaacgaagtaagttttcttggccatattattt 86725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 8084 - 7970
Alignment:
Q  14 catgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttc 113  Q
    ||||| || |||||||||||||| ||||||||| | |||||||||||  | ||||| || || || |||||||||||| |||| |  || |||||||||     
T  8084 catgctgaacatctgaagattgtcttgcaagtgttgaaagagaagaaactttatgctaaattatctaaatgtgagttctggttgaaagaggtaagtttta 7985  T
Q  114 ttggccatattattt 128  Q
    | |||||| ||||||    
T  7984 tgggccatgttattt 7970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 25470 - 25388
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagtt 90  Q
    ||||||||||| |||||| ||| |||||| ||||||||  | ||||||||  |||||| |||||||||||| || ||||||||    
T  25470 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtt 25388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 14984 - 14902
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagtt 90  Q
    ||||||||||| |||||| ||| |||||| ||||||||  | ||||||||  |||||| |||||||||||| || ||||||||    
T  14984 gaagagcatgctgagcatttgaggattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagtt 14902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 1006 - 1126
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    ||||| ||||| |||||| ||||| | || ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| || ||||| |    
T  1006 gaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaattctggttgagagaagtga 1105  T
Q  108 gttttcttggccatattattt 128  Q
    | |||||||| ||| ||||||    
T  1106 gctttcttggacatgttattt 1126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 35798 - 35706
Alignment:
Q  36 tattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggccatattattt 128  Q
    ||||||||||  | ||||| |||| ||||||||| |||||||||||||| ||||||  |||||| ||||| || ||||| || || |||||||    
T  35798 tattgcaagttttgaaagaaaagaggttgtatgcgaagttgtcaaaatgcgagttctcgttaagcgaagtgagctttctgggtcacattattt 35706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 103309 - 103189
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    ||||| ||||| || ||| |||||| ||| ||||||||||| |||||||||||| | ||||| || || ||||| ||||| ||| | || |  || || |    
T  103309 gaagaacatgccgaacatttgaagactgttttgcaagtgctgaaagagaagaagctttatgctaaattatcaaagtgtgaattctgattgaaagaggtga 103210  T
Q  108 gttttcttggccatattattt 128  Q
    |||||||||||||| ||||||    
T  103209 gttttcttggccatgttattt 103189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 17732 - 17610
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| ||||| | || ||||||||| | |||||||||||  | ||||| || || || || ||||| ||| |||| |  |||||    
T  17732 aagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaatctttatgctaaattatctaagtgtgaattctggttgaaagaagt 17633  T
Q  106 aagttttcttggccatattattt 128  Q
     ||||||||||||||| ||||||    
T  17632 gagttttcttggccatgttattt 17610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 137 - 15
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| ||||| | || ||||||||| | |||||||||||| | ||||| || || || || ||||| ||| ||||||  |||||    
T  137 aagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgcgaaattatctaagtgtgaattctggttaaaagaagt 38  T
Q  106 aagttttcttggccatattattt 128  Q
     || |||||||| ||| ||||||    
T  37 gagctttcttgggcatgttattt 15  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 120
Target Start/End: Complemental strand, 5949 - 5835
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| |||||||||| || |||||| | |||||||||||| | ||||| ||  ||| ||| ||| | ||| |||| |  || ||    
T  5949 aagaagaacatgctgagcatttgaagattgttttacaagtgttgaaagagaagaagctatatgctaaactgttaaagtgtaaattctggttgaaagaggt 5850  T
Q  106 aagttttcttggcca 120  Q
    |||||||||||||||    
T  5849 aagttttcttggcca 5835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 120
Target Start/End: Complemental strand, 13079 - 12965
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| |||||||||| || |||||| | |||||||||||| | ||||| ||  ||| ||| ||| | ||| |||| |  || ||    
T  13079 aagaagaacatgctgagcatttgaagattgttttacaagtgttgaaagagaagaagctatatgctaaactgttaaagtgtaaattctggttgaaagaggt 12980  T
Q  106 aagttttcttggcca 120  Q
    |||||||||||||||    
T  12979 aagttttcttggcca 12965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 1067 - 953
Alignment:
Q  14 catgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttc 113  Q
    ||||| |||||| |||  ||||| |||||||| || || ||||||||||| |||||||| || || || ||||| ||| |||| |  ||||| | |||||    
T  1067 catgcggagcatttgagaattgttttgcaagtactgaaggagaagaagttatatgccaaattatcgaagtgtgaattctggttgaacgaagtgacttttc 968  T
Q  114 ttggccatattattt 128  Q
    |||||||||| ||||    
T  967 ttggccatatcattt 953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 38176 - 38298
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| ||||| | || ||||||||| | |||||||||||| | ||||| || ||||| || ||||| ||| |||| |  |||||    
T  38176 aagaagaacatgctgagcatttgaagctggttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaattctggttgaaagaagt 38275  T
Q  106 aagttttcttggccatattattt 128  Q
     || |||||||| ||| ||||||    
T  38276 gagctttcttggacatgttattt 38298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 85458 - 85580
Alignment:
Q  6 aagaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagt 105  Q
    ||||||| ||||| |||||| ||||| |||| ||||||||| | |||||||||||| | ||||| || ||||| || || || ||| |||| |  |||||    
T  85458 aagaagaacatgctgagcatttgaagcttgttttgcaagtgttgaaagagaagaagctttatgcgaaattgtctaagtgcgaattctggttgaaagaagt 85557  T
Q  106 aagttttcttggccatattattt 128  Q
     || |||||||| ||| ||||||    
T  85558 gagctttcttggacatgttattt 85580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 86038 - 86144
Alignment:
Q  20 gagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcc 119  Q
    ||||||||||||||||| ||||||||| | || ||||||||  | ||||| || || || || ||||| ||| |||| |  || ||||||||||||||||    
T  86038 gagcatctgaagattgtcttgcaagtgttgaaggagaagaaactttatgctaaattatctaagtgtgaattctggttgaaagaggtaagttttcttggcc 86137  T
Q  120 atattat 126  Q
    || ||||    
T  86138 atgttat 86144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 9289 - 9249
Alignment:
Q  20 gagcatctgaagattgtattgcaagtgctaaaagagaagaa 60  Q
    ||||||||||||||||| ||||||||| | |||||||||||    
T  9289 gagcatctgaagattgtcttgcaagtgttgaaagagaagaa 9249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 128
Target Start/End: Complemental strand, 7285 - 7177
Alignment:
Q  20 gagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaagttttcttggcc 119  Q
    |||||| ||||| | || ||||||||| | |||||||||||  | ||||| || ||||| || ||||| ||| ||||||  ||||| ||||||||||| |    
T  7285 gagcatttgaagttggttttgcaagtgttgaaagagaagaaactttatgcgaaattgtctaagtgtgaattctggttaaaagaagtgagttttcttggac 7186  T
Q  120 atattattt 128  Q
    || ||||||    
T  7185 atgttattt 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 40708 - 40588
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    ||||| ||||| |||||| |||||| ||| ||||||||| | |||||||||||  | ||||| || || || || ||||| ||| |||| |  || || |    
T  40708 gaagatcatgctgagcatttgaagactgttttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgaattctggttgaaagaggtga 40609  T
Q  108 gttttcttggccatattattt 128  Q
    |||||||||||||| ||||||    
T  40608 gttttcttggccatgttattt 40588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 74428 - 74308
Alignment:
Q  8 gaagagcatgcagagcatctgaagattgtattgcaagtgctaaaagagaagaagttgtatgccaagttgtcaaaatgtgagttccggttaagtgaagtaa 107  Q
    ||||| ||||| |||||| |||||| ||| ||||||||| | |||||||||||  | ||||| || || || || ||||| ||| |||| |  || || |    
T  74428 gaagatcatgctgagcatttgaagactgttttgcaagtgttgaaagagaagaaactttatgctaaattatctaagtgtgaattctggttgaaagaggtga 74329  T
Q  108 gttttcttggccatattattt 128  Q
    |||||||||||||| ||||||    
T  74328 gttttcttggccatgttattt 74308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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