View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0134_1D_low_29 (Length: 222)

Name: NF0134_1D_low_29
Description: NF0134_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0134_1D_low_29
NF0134_1D_low_29
[»] chr2 (1 HSPs)
chr2 (11-55)||(39076797-39076841)


Alignment Details
Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 39076841 - 39076797
Alignment:
Q  11 atgaatagaaccgggtttatggttaattcgcctgcgtttcatggc 55  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  39076841 atgaatagaaccgggtttatggttaattcgcctgcgtttcttggc 39076797  T

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