View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0134_1D_low_7 (Length: 394)

Name: NF0134_1D_low_7
Description: NF0134_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0134_1D_low_7
NF0134_1D_low_7
[»] chr8 (71 HSPs)
chr8 (184-394)||(28903986-28904196)
chr8 (16-181)||(28902451-28902616)
chr8 (208-386)||(24850987-24851165)
chr8 (215-388)||(14076997-14077169)
chr8 (165-388)||(17835418-17835640)
chr8 (184-388)||(13833622-13833826)
chr8 (165-388)||(14271715-14271938)
chr8 (184-388)||(15058523-15058726)
chr8 (184-380)||(24518607-24518801)
chr8 (169-386)||(15176436-15176652)
chr8 (184-388)||(30117677-30117881)
chr8 (165-387)||(24381325-24381548)
chr8 (244-388)||(17980667-17980811)
chr8 (210-384)||(19784825-19784999)
chr8 (165-374)||(20400222-20400431)
chr8 (164-386)||(28621481-28621702)
chr8 (174-381)||(24380362-24380569)
chr8 (237-386)||(24388444-24388592)
chr8 (207-388)||(5856654-5856834)
chr8 (167-386)||(24583173-24583392)
chr8 (175-388)||(22501708-22501920)
chr8 (210-388)||(30487720-30487903)
chr8 (210-380)||(6886550-6886720)
chr8 (165-386)||(19265698-19265919)
chr8 (165-386)||(24389632-24389853)
chr8 (164-388)||(28858710-28858933)
chr8 (262-380)||(35861559-35861676)
chr8 (184-380)||(24090897-24091092)
chr8 (163-386)||(26139664-26139887)
chr8 (230-381)||(17649683-17649834)
chr8 (220-332)||(24750757-24750869)
chr8 (184-388)||(24908774-24908982)
chr8 (184-388)||(24910995-24911203)
chr8 (231-386)||(26829532-26829687)
chr8 (264-363)||(15557288-15557387)
chr8 (163-386)||(4007149-4007373)
chr8 (238-386)||(30832815-30832963)
chr8 (184-298)||(13313290-13313404)
chr8 (165-386)||(23867829-23868050)
chr8 (231-375)||(25481571-25481716)
chr8 (236-372)||(19791283-19791419)
chr8 (231-386)||(17998130-17998285)
chr8 (185-380)||(18836677-18836869)
chr8 (263-388)||(2638593-2638719)
chr8 (165-386)||(17510776-17511001)
chr8 (274-388)||(7984990-7985105)
chr8 (238-380)||(24109107-24109249)
chr8 (259-380)||(18570411-18570532)
chr8 (263-386)||(21230801-21230924)
chr8 (263-386)||(21316659-21316782)
chr8 (165-386)||(29765391-29765613)
chr8 (165-299)||(18446859-18446993)
chr8 (259-329)||(6286219-6286288)
chr8 (207-372)||(18007426-18007591)
chr8 (209-386)||(26888362-26888539)
chr8 (235-332)||(37527096-37527192)
chr8 (165-328)||(17100206-17100368)
chr8 (274-384)||(20268268-20268376)
chr8 (274-384)||(21054897-21055005)
chr8 (320-381)||(17976119-17976180)
chr8 (270-374)||(24091704-24091808)
chr8 (236-371)||(25180792-25180927)
chr8 (90-164)||(16051933-16052007)
chr8 (165-265)||(19704983-19705083)
chr8 (266-298)||(28275423-28275455)
chr8 (89-160)||(15213390-15213461)
chr8 (120-155)||(29046944-29046979)
chr8 (260-326)||(34499172-34499237)
chr8 (260-371)||(12342984-12343096)
chr8 (341-386)||(18822467-18822512)
chr8 (341-386)||(24520176-24520221)
[»] chr2 (75 HSPs)
chr2 (42-388)||(32130576-32130923)
chr2 (16-386)||(32137763-32138134)
chr2 (16-353)||(32139185-32139523)
chr2 (147-388)||(32141373-32141614)
chr2 (184-384)||(29717376-29717574)
chr2 (163-384)||(16157082-16157303)
chr2 (184-388)||(27420946-27421149)
chr2 (208-388)||(18970816-18970995)
chr2 (207-394)||(22627253-22627439)
chr2 (207-388)||(8501552-8501733)
chr2 (207-394)||(26651679-26651864)
chr2 (165-386)||(27907522-27907743)
chr2 (231-386)||(25922481-25922635)
chr2 (207-380)||(28930156-28930329)
chr2 (165-380)||(17891613-17891828)
chr2 (184-386)||(18758177-18758379)
chr2 (209-386)||(17350854-17351031)
chr2 (237-386)||(25537432-25537581)
chr2 (237-386)||(25532112-25532261)
chr2 (231-372)||(18553179-18553320)
chr2 (174-388)||(23010052-23010267)
chr2 (165-386)||(25886191-25886412)
chr2 (209-386)||(34574389-34574566)
chr2 (237-386)||(24086378-24086527)
chr2 (207-380)||(32438722-32438895)
chr2 (238-386)||(34579846-34579994)
chr2 (238-386)||(34585595-34585743)
chr2 (231-386)||(25196487-25196642)
chr2 (167-379)||(22568936-22569149)
chr2 (236-366)||(11464389-11464518)
chr2 (207-386)||(27540307-27540486)
chr2 (32-155)||(30999129-30999252)
chr2 (243-385)||(45572444-45572586)
chr2 (243-385)||(45576111-45576253)
chr2 (243-385)||(45579778-45579920)
chr2 (243-385)||(45583445-45583587)
chr2 (243-385)||(45587112-45587254)
chr2 (243-385)||(45590779-45590921)
chr2 (243-385)||(45594446-45594588)
chr2 (243-385)||(45598113-45598255)
chr2 (243-385)||(45601780-45601922)
chr2 (243-385)||(45605447-45605589)
chr2 (243-385)||(45609114-45609256)
chr2 (243-385)||(45612781-45612923)
chr2 (243-385)||(45616448-45616590)
chr2 (269-394)||(34369195-34369320)
chr2 (236-373)||(17199416-17199552)
chr2 (278-386)||(20852958-20853066)
chr2 (238-332)||(18545203-18545296)
chr2 (291-384)||(27871163-27871257)
chr2 (231-386)||(18120611-18120769)
chr2 (237-373)||(20379175-20379311)
chr2 (164-386)||(21905602-21905824)
chr2 (163-386)||(29144510-29144734)
chr2 (184-366)||(28918084-28918266)
chr2 (221-374)||(30682258-30682411)
chr2 (207-286)||(38796158-38796237)
chr2 (238-332)||(29850947-29851040)
chr2 (239-374)||(32086936-32087071)
chr2 (318-380)||(16042813-16042875)
chr2 (253-373)||(19139533-19139651)
chr2 (341-384)||(8445649-8445692)
chr2 (86-153)||(15454145-15454212)
chr2 (314-384)||(19198625-19198696)
chr2 (88-154)||(19949153-19949219)
chr2 (185-322)||(26313119-26313255)
chr2 (165-287)||(35680100-35680222)
chr2 (271-332)||(29834796-29834856)
chr2 (341-376)||(17674166-17674201)
chr2 (349-388)||(32140694-32140733)
chr2 (172-294)||(16257828-16257950)
chr2 (341-375)||(17629090-17629124)
chr2 (265-366)||(25883455-25883555)
chr2 (88-154)||(35708185-35708250)
chr2 (236-299)||(18458435-18458499)
[»] chr6 (72 HSPs)
chr6 (165-388)||(30356137-30356360)
chr6 (174-388)||(27961088-27961302)
chr6 (207-388)||(32759843-32760024)
chr6 (165-382)||(22564549-22564766)
chr6 (203-388)||(21079759-21079943)
chr6 (166-381)||(23644318-23644533)
chr6 (166-379)||(24469681-24469894)
chr6 (207-380)||(9507312-9507485)
chr6 (188-388)||(3358017-3358216)
chr6 (167-367)||(23087109-23087309)
chr6 (174-388)||(9338987-9339200)
chr6 (207-388)||(21060446-21060626)
chr6 (264-388)||(10822111-10822234)
chr6 (231-374)||(9897933-9898076)
chr6 (204-384)||(16175657-16175837)
chr6 (165-379)||(24479907-24480121)
chr6 (240-386)||(2588172-2588318)
chr6 (237-386)||(14723561-14723709)
chr6 (164-386)||(14076272-14076494)
chr6 (237-386)||(17822096-17822246)
chr6 (209-386)||(19594020-19594198)
chr6 (164-386)||(22404253-22404474)
chr6 (164-384)||(8038049-8038269)
chr6 (209-386)||(19577581-19577757)
chr6 (237-386)||(18171325-18171473)
chr6 (235-386)||(13216375-13216526)
chr6 (237-386)||(23005318-23005467)
chr6 (238-386)||(23782899-23783047)
chr6 (237-386)||(21932349-21932499)
chr6 (322-384)||(20404167-20404229)
chr6 (162-386)||(21760404-21760628)
chr6 (207-332)||(8246544-8246668)
chr6 (231-388)||(20080611-20080767)
chr6 (165-375)||(1636521-1636730)
chr6 (240-375)||(8066539-8066674)
chr6 (219-307)||(10505101-10505189)
chr6 (236-388)||(22569729-22569880)
chr6 (231-388)||(24389213-24389370)
chr6 (165-332)||(14641563-14641729)
chr6 (211-370)||(19721891-19722050)
chr6 (237-386)||(21152563-21152713)
chr6 (238-368)||(21546841-21546972)
chr6 (184-327)||(22845870-22846012)
chr6 (341-388)||(10505045-10505092)
chr6 (237-386)||(9519608-9519757)
chr6 (263-384)||(9840904-9841025)
chr6 (274-386)||(22411513-22411625)
chr6 (231-299)||(19246239-19246307)
chr6 (264-328)||(31878953-31879016)
chr6 (231-309)||(9387512-9387590)
chr6 (237-299)||(11136881-11136943)
chr6 (237-299)||(14078000-14078062)
chr6 (314-387)||(15585967-15586041)
chr6 (272-394)||(16167686-16167807)
chr6 (301-388)||(15600548-15600637)
chr6 (253-386)||(26820760-26820891)
chr6 (231-376)||(34395423-34395573)
chr6 (278-380)||(17295800-17295902)
chr6 (165-311)||(14727087-14727231)
chr6 (158-299)||(17847743-17847884)
chr6 (161-385)||(21687125-21687349)
chr6 (341-386)||(20004356-20004401)
chr6 (100-160)||(13723853-13723912)
chr6 (341-384)||(9848041-9848084)
chr6 (341-388)||(14727001-14727048)
chr6 (320-386)||(17383634-17383700)
chr6 (231-388)||(24388042-24388198)
chr6 (264-317)||(6629073-6629125)
chr6 (341-386)||(14639166-14639211)
chr6 (292-382)||(20723481-20723573)
chr6 (253-298)||(21845817-21845862)
chr6 (89-153)||(22262785-22262849)
[»] chr1 (74 HSPs)
chr1 (174-388)||(14235293-14235507)
chr1 (165-386)||(27116223-27116443)
chr1 (233-394)||(26652446-26652605)
chr1 (165-386)||(21450643-21450864)
chr1 (163-386)||(21663088-21663312)
chr1 (253-386)||(26022271-26022404)
chr1 (163-386)||(22621668-22621892)
chr1 (210-388)||(15526841-15527019)
chr1 (165-386)||(15542308-15542529)
chr1 (237-394)||(26581441-26581599)
chr1 (237-386)||(22426587-22426736)
chr1 (165-386)||(18527496-18527717)
chr1 (165-386)||(25402435-25402656)
chr1 (184-386)||(17444944-17445144)
chr1 (172-388)||(22626161-22626377)
chr1 (259-386)||(26101736-26101863)
chr1 (237-386)||(18734657-18734806)
chr1 (231-384)||(21848504-21848657)
chr1 (164-380)||(26611330-26611546)
chr1 (260-388)||(15811540-15811668)
chr1 (237-386)||(20107731-20107879)
chr1 (174-306)||(7221472-7221604)
chr1 (165-388)||(26647357-26647579)
chr1 (165-388)||(35133758-35133981)
chr1 (163-386)||(14782406-14782629)
chr1 (237-386)||(15630995-15631146)
chr1 (185-386)||(16180594-16180794)
chr1 (253-388)||(17543203-17543337)
chr1 (184-388)||(16114674-16114878)
chr1 (165-375)||(12210150-12210362)
chr1 (278-380)||(16786206-16786308)
chr1 (254-388)||(23035009-23035142)
chr1 (237-386)||(16915268-16915417)
chr1 (165-362)||(24464518-24464711)
chr1 (231-384)||(27911943-27912095)
chr1 (231-388)||(44796991-44797148)
chr1 (165-388)||(9782979-9783203)
chr1 (163-386)||(33192227-33192451)
chr1 (242-380)||(14780570-14780708)
chr1 (207-388)||(16363496-16363678)
chr1 (185-388)||(25959479-25959681)
chr1 (237-386)||(16817180-16817329)
chr1 (161-386)||(21333067-21333288)
chr1 (236-388)||(24282875-24283028)
chr1 (165-370)||(729027-729233)
chr1 (237-386)||(22624492-22624641)
chr1 (207-286)||(17365747-17365826)
chr1 (240-374)||(18827284-18827418)
chr1 (320-384)||(7881673-7881738)
chr1 (239-332)||(22665717-22665809)
chr1 (236-386)||(27546259-27546410)
chr1 (208-386)||(12011227-12011404)
chr1 (184-380)||(15158807-15159004)
chr1 (233-394)||(10063028-10063189)
chr1 (237-386)||(18832091-18832240)
chr1 (174-312)||(24901160-24901297)
chr1 (185-373)||(28009635-28009823)
chr1 (165-388)||(15571688-15571912)
chr1 (80-153)||(23521346-23521419)
chr1 (259-386)||(13267721-13267848)
chr1 (203-380)||(20033156-20033332)
chr1 (292-386)||(22507501-22507595)
chr1 (298-384)||(31260759-31260845)
chr1 (320-380)||(17016987-17017047)
chr1 (339-378)||(13134256-13134295)
chr1 (231-380)||(12262163-12262312)
chr1 (236-292)||(18098319-18098375)
chr1 (80-160)||(23519369-23519449)
chr1 (128-164)||(25726297-25726333)
chr1 (128-164)||(25734705-25734741)
chr1 (89-153)||(27460522-27460586)
chr1 (130-164)||(18300674-18300708)
chr1 (88-154)||(21451624-21451690)
chr1 (210-286)||(9403610-9403686)
[»] chr3 (61 HSPs)
chr3 (164-388)||(20886743-20886966)
chr3 (165-382)||(7805623-7805839)
chr3 (165-386)||(31283903-31284125)
chr3 (172-380)||(8145130-8145338)
chr3 (183-380)||(13906601-13906798)
chr3 (174-386)||(22246873-22247084)
chr3 (220-388)||(28326189-28326356)
chr3 (165-379)||(8765557-8765771)
chr3 (165-388)||(819846-820068)
chr3 (226-384)||(3002935-3003095)
chr3 (162-388)||(22470399-22470628)
chr3 (231-388)||(5509943-5510100)
chr3 (185-393)||(26092773-26092982)
chr3 (184-388)||(3114728-3114932)
chr3 (237-386)||(8881473-8881621)
chr3 (231-386)||(20021883-20022038)
chr3 (165-386)||(18457111-18457331)
chr3 (207-376)||(17134978-17135147)
chr3 (259-388)||(18735364-18735493)
chr3 (164-386)||(19912455-19912678)
chr3 (203-386)||(12372370-12372551)
chr3 (237-376)||(14977692-14977831)
chr3 (210-388)||(23054626-23054799)
chr3 (231-386)||(27073828-27073983)
chr3 (165-386)||(13938846-13939067)
chr3 (211-388)||(16223365-16223542)
chr3 (242-377)||(18747691-18747826)
chr3 (207-386)||(2166076-2166256)
chr3 (165-332)||(8770495-8770661)
chr3 (259-388)||(19387944-19388073)
chr3 (165-310)||(52935533-52935674)
chr3 (164-361)||(18535671-18535868)
chr3 (237-386)||(19169931-19170079)
chr3 (269-388)||(6075845-6075964)
chr3 (165-380)||(34276437-34276654)
chr3 (237-386)||(16228416-16228565)
chr3 (237-386)||(8115366-8115505)
chr3 (242-366)||(19533678-19533802)
chr3 (238-374)||(19909102-19909238)
chr3 (207-312)||(27852645-27852749)
chr3 (307-388)||(27853056-27853137)
chr3 (169-380)||(12771206-12771416)
chr3 (172-373)||(20891652-20891850)
chr3 (165-296)||(22450414-22450546)
chr3 (162-379)||(16242191-16242405)
chr3 (237-375)||(20431359-20431497)
chr3 (236-332)||(3429295-3429390)
chr3 (301-388)||(23637486-23637574)
chr3 (230-384)||(8448680-8448834)
chr3 (274-384)||(18466807-18466915)
chr3 (89-159)||(19218832-19218902)
chr3 (300-384)||(7208400-7208485)
chr3 (242-386)||(19573652-19573796)
chr3 (230-299)||(27412724-27412793)
chr3 (88-155)||(11521585-11521652)
chr3 (172-386)||(25850955-25851171)
chr3 (274-386)||(19170250-19170361)
chr3 (90-151)||(19263533-19263594)
chr3 (165-267)||(12517285-12517387)
chr3 (320-388)||(15669439-15669507)
chr3 (89-153)||(21828846-21828910)
[»] scaffold0072 (1 HSPs)
scaffold0072 (165-388)||(38165-38388)
[»] chr7 (82 HSPs)
chr7 (203-388)||(5046874-5047056)
chr7 (210-388)||(2506855-2507033)
chr7 (165-394)||(1254696-1254924)
chr7 (207-388)||(10418431-10418612)
chr7 (233-388)||(5221036-5221191)
chr7 (165-388)||(10332278-10332501)
chr7 (207-386)||(21502730-21502909)
chr7 (175-386)||(8052439-8052650)
chr7 (185-388)||(20175968-20176170)
chr7 (257-388)||(9722325-9722456)
chr7 (164-380)||(26249074-26249290)
chr7 (165-378)||(9078881-9079095)
chr7 (165-386)||(2927750-2927971)
chr7 (165-394)||(6018225-6018455)
chr7 (165-371)||(9767676-9767882)
chr7 (233-388)||(15611107-15611261)
chr7 (207-380)||(144859-145031)
chr7 (174-386)||(5236875-5237087)
chr7 (165-386)||(11804575-11804795)
chr7 (164-374)||(1589127-1589338)
chr7 (241-394)||(5471810-5471959)
chr7 (237-386)||(8317513-8317662)
chr7 (231-380)||(20577386-20577535)
chr7 (185-386)||(3585542-3585744)
chr7 (165-386)||(4450546-4450768)
chr7 (231-386)||(9978161-9978316)
chr7 (163-374)||(1810793-1811003)
chr7 (174-332)||(8977479-8977636)
chr7 (241-386)||(9288786-9288931)
chr7 (241-386)||(9298578-9298723)
chr7 (237-386)||(20597476-20597625)
chr7 (175-386)||(18986754-18986965)
chr7 (175-386)||(19001382-19001593)
chr7 (207-394)||(9918035-9918222)
chr7 (207-394)||(9925947-9926134)
chr7 (237-388)||(15170836-15170986)
chr7 (165-386)||(6046403-6046624)
chr7 (174-344)||(21707346-21707516)
chr7 (236-366)||(23127965-23128095)
chr7 (210-388)||(5485499-5485685)
chr7 (274-386)||(9134684-9134796)
chr7 (274-394)||(24751309-24751426)
chr7 (268-381)||(6039400-6039513)
chr7 (162-394)||(10414276-10414507)
chr7 (175-379)||(10611596-10611800)
chr7 (277-393)||(8038888-8039004)
chr7 (236-388)||(21233977-21234129)
chr7 (231-388)||(1586067-1586222)
chr7 (165-299)||(13280722-13280856)
chr7 (165-388)||(3736212-3736433)
chr7 (157-298)||(3173674-3173815)
chr7 (210-386)||(25692665-25692842)
chr7 (268-384)||(2455223-2455336)
chr7 (233-386)||(4900397-4900551)
chr7 (295-381)||(2505724-2505811)
chr7 (240-386)||(13287785-13287931)
chr7 (272-381)||(7399219-7399328)
chr7 (274-386)||(13252766-13252878)
chr7 (236-388)||(22468603-22468755)
chr7 (184-288)||(14195722-14195826)
chr7 (164-384)||(17887729-17887948)
chr7 (164-298)||(23173684-23173818)
chr7 (236-377)||(11578710-11578850)
chr7 (301-388)||(9501886-9501974)
chr7 (274-386)||(39270381-39270492)
chr7 (283-388)||(19154710-19154816)
chr7 (283-388)||(20754109-20754215)
chr7 (98-152)||(3400239-3400293)
chr7 (231-332)||(4988148-4988248)
chr7 (231-332)||(4992246-4992346)
chr7 (88-144)||(315533-315589)
chr7 (320-384)||(13281882-13281946)
chr7 (341-384)||(1732549-1732592)
chr7 (89-152)||(20446618-20446681)
chr7 (231-326)||(23897177-23897271)
chr7 (291-380)||(3173128-3173217)
chr7 (88-150)||(7493689-7493751)
chr7 (329-394)||(10991127-10991193)
chr7 (344-388)||(3189516-3189561)
chr7 (127-160)||(7777726-7777759)
chr7 (238-374)||(10585260-10585396)
chr7 (127-164)||(20470405-20470442)
[»] scaffold0086 (2 HSPs)
scaffold0086 (184-388)||(11967-12170)
scaffold0086 (207-386)||(12828-13014)
[»] scaffold0043 (1 HSPs)
scaffold0043 (165-388)||(88436-88659)
[»] chr4 (74 HSPs)
chr4 (184-388)||(18447459-18447662)
chr4 (165-384)||(1832054-1832272)
chr4 (165-371)||(12246565-12246770)
chr4 (165-384)||(9849707-9849926)
chr4 (187-368)||(19883534-19883715)
chr4 (184-388)||(16669740-16669944)
chr4 (257-388)||(13588592-13588723)
chr4 (165-380)||(25024989-25025203)
chr4 (165-388)||(17434305-17434531)
chr4 (207-394)||(9053874-9054060)
chr4 (209-386)||(17108594-17108771)
chr4 (185-386)||(17711182-17711383)
chr4 (231-388)||(20828205-20828362)
chr4 (238-386)||(11252202-11252349)
chr4 (165-386)||(15166344-15166565)
chr4 (210-333)||(23970706-23970831)
chr4 (233-384)||(25117933-25118086)
chr4 (184-332)||(7583723-7583870)
chr4 (207-386)||(14573325-14573504)
chr4 (237-370)||(11240989-11241123)
chr4 (165-374)||(19556541-19556746)
chr4 (175-394)||(12836080-12836295)
chr4 (207-379)||(16928807-16928979)
chr4 (268-380)||(19547155-19547266)
chr4 (184-386)||(11512045-11512247)
chr4 (185-386)||(10106171-10106372)
chr4 (239-374)||(25096188-25096323)
chr4 (236-388)||(5691629-5691782)
chr4 (165-386)||(17335355-17335576)
chr4 (209-386)||(22171625-22171801)
chr4 (166-386)||(9536756-9536978)
chr4 (268-380)||(10108129-10108241)
chr4 (233-375)||(23083588-23083729)
chr4 (174-373)||(8968080-8968279)
chr4 (98-155)||(51885044-51885101)
chr4 (231-386)||(17024756-17024913)
chr4 (163-333)||(9263348-9263517)
chr4 (253-394)||(10236457-10236598)
chr4 (259-373)||(15047654-15047770)
chr4 (259-373)||(15106654-15106770)
chr4 (231-380)||(20316237-20316385)
chr4 (231-384)||(22217060-22217212)
chr4 (88-155)||(27303130-27303197)
chr4 (320-378)||(17661834-17661892)
chr4 (231-384)||(7613614-7613768)
chr4 (165-386)||(17218404-17218625)
chr4 (209-386)||(19603901-19604077)
chr4 (237-331)||(4617026-4617119)
chr4 (209-332)||(18750755-18750877)
chr4 (340-386)||(4616942-4616988)
chr4 (233-305)||(19538951-19539022)
chr4 (233-290)||(19667016-19667074)
chr4 (165-297)||(12616679-12616811)
chr4 (209-277)||(8140390-8140458)
chr4 (340-388)||(22527820-22527868)
chr4 (339-394)||(8140323-8140378)
chr4 (341-384)||(19335386-19335429)
chr4 (259-326)||(19919232-19919297)
chr4 (263-385)||(22350338-22350460)
chr4 (274-383)||(9750481-9750589)
chr4 (341-386)||(11782356-11782401)
chr4 (290-379)||(22345961-22346050)
chr4 (253-387)||(17277719-17277854)
chr4 (339-388)||(15046726-15046772)
chr4 (339-388)||(15107652-15107698)
chr4 (97-148)||(18898421-18898472)
chr4 (88-155)||(25314882-25314949)
chr4 (341-380)||(26114377-26114416)
chr4 (237-386)||(10432054-10432203)
chr4 (274-388)||(19094120-19094235)
chr4 (339-373)||(23975729-23975763)
chr4 (127-160)||(5676679-5676712)
chr4 (320-380)||(10089561-10089621)
chr4 (89-153)||(15192637-15192701)
[»] chr5 (57 HSPs)
chr5 (184-385)||(17469577-17469778)
chr5 (207-388)||(28254765-28254946)
chr5 (164-388)||(19761580-19761803)
chr5 (167-388)||(26348316-26348537)
chr5 (164-386)||(23387546-23387768)
chr5 (165-388)||(17831567-17831790)
chr5 (167-384)||(18832100-18832317)
chr5 (164-387)||(29987831-29988055)
chr5 (234-388)||(18227486-18227638)
chr5 (184-384)||(24162030-24162229)
chr5 (163-386)||(24658297-24658520)
chr5 (184-386)||(19003784-19003986)
chr5 (184-386)||(19052977-19053179)
chr5 (253-388)||(25572550-25572685)
chr5 (162-376)||(26122268-26122482)
chr5 (231-386)||(19006914-19007070)
chr5 (172-388)||(34488730-34488947)
chr5 (240-388)||(18939394-18939542)
chr5 (226-386)||(24142283-24142442)
chr5 (165-386)||(20860215-20860436)
chr5 (185-380)||(29798926-29799121)
chr5 (165-388)||(31600075-31600298)
chr5 (185-380)||(26117319-26117514)
chr5 (233-388)||(107728-107881)
chr5 (167-388)||(24263752-24263974)
chr5 (231-382)||(28280162-28280314)
chr5 (210-384)||(24261944-24262119)
chr5 (175-386)||(28666368-28666579)
chr5 (253-388)||(22845883-22846019)
chr5 (231-374)||(24513252-24513395)
chr5 (207-380)||(24320564-24320737)
chr5 (207-373)||(25920721-25920886)
chr5 (184-299)||(26253455-26253570)
chr5 (231-386)||(16521969-16522125)
chr5 (264-381)||(24849666-24849782)
chr5 (231-386)||(20548519-20548673)
chr5 (162-374)||(25400735-25400945)
chr5 (209-386)||(34131962-34132139)
chr5 (314-380)||(17336474-17336540)
chr5 (165-380)||(23214825-23215042)
chr5 (240-296)||(23266776-23266832)
chr5 (301-377)||(26253354-26253430)
chr5 (318-384)||(15520853-15520920)
chr5 (88-155)||(22230153-22230220)
chr5 (207-300)||(24188860-24188953)
chr5 (259-351)||(23115060-23115151)
chr5 (236-344)||(26315105-26315211)
chr5 (320-386)||(23338817-23338883)
chr5 (207-293)||(26069218-26069304)
chr5 (87-164)||(22755367-22755444)
chr5 (343-386)||(22797606-22797649)
chr5 (165-225)||(23338928-23338988)
chr5 (92-148)||(24842113-24842169)
chr5 (97-148)||(26329702-26329753)
chr5 (253-307)||(22797508-22797561)
chr5 (342-384)||(24807369-24807411)
chr5 (124-153)||(17028707-17028736)
[»] scaffold0016 (1 HSPs)
scaffold0016 (164-386)||(4700-4922)
[»] scaffold0024 (1 HSPs)
scaffold0024 (165-374)||(41227-41435)
[»] scaffold0360 (1 HSPs)
scaffold0360 (207-388)||(16509-16689)
[»] scaffold0094 (1 HSPs)
scaffold0094 (175-376)||(12117-12317)
[»] scaffold0005 (1 HSPs)
scaffold0005 (207-386)||(243872-244051)
[»] scaffold0002 (1 HSPs)
scaffold0002 (231-387)||(95499-95655)
[»] scaffold0451 (2 HSPs)
scaffold0451 (237-380)||(5612-5755)
scaffold0451 (207-388)||(10135-10315)
[»] scaffold0258 (1 HSPs)
scaffold0258 (237-380)||(20324-20466)
[»] scaffold0056 (1 HSPs)
scaffold0056 (237-380)||(22918-23061)
[»] scaffold0555 (1 HSPs)
scaffold0555 (184-376)||(6339-6531)
[»] scaffold1017 (1 HSPs)
scaffold1017 (243-370)||(491-618)
[»] scaffold0019 (3 HSPs)
scaffold0019 (237-386)||(182583-182732)
scaffold0019 (174-273)||(24791-24890)
scaffold0019 (184-247)||(35193-35256)
[»] scaffold0111 (1 HSPs)
scaffold0111 (211-373)||(21329-21491)
[»] scaffold0032 (1 HSPs)
scaffold0032 (184-372)||(92847-93035)
[»] scaffold0015 (1 HSPs)
scaffold0015 (271-386)||(201938-202053)
[»] scaffold0637 (1 HSPs)
scaffold0637 (207-394)||(7254-7441)
[»] scaffold0062 (1 HSPs)
scaffold0062 (254-387)||(41624-41759)
[»] scaffold0014 (1 HSPs)
scaffold0014 (164-298)||(192086-192220)
[»] scaffold0386 (3 HSPs)
scaffold0386 (174-361)||(4881-5066)
scaffold0386 (186-388)||(13495-13698)
scaffold0386 (259-388)||(9204-9333)
[»] scaffold0362 (1 HSPs)
scaffold0362 (80-160)||(8053-8132)
[»] scaffold0671 (1 HSPs)
scaffold0671 (253-386)||(3293-3426)
[»] scaffold0441 (1 HSPs)
scaffold0441 (341-386)||(2141-2186)
[»] scaffold0103 (1 HSPs)
scaffold0103 (90-146)||(37225-37281)
[»] scaffold0115 (1 HSPs)
scaffold0115 (263-324)||(36229-36289)


Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 184 - 394
Target Start/End: Original strand, 28903986 - 28904196
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28903986 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 28904085  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagca 383  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28904086 tttctatatttgagtcatgtaattatatttttcctgaaacatagcaattatatgatgttttgatgtaattcacgaacaaatcatgcaaatcggcaaagca 28904185  T
Q  384 agacacttgaa 394  Q
    |||||||||||    
T  28904186 agacacttgaa 28904196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 28902451 - 28902616
Alignment:
Q  16 ggacatcattggttgctgcctcaggcgcccttgcgtgtaactctaggcgcccagatgcaggcataaagtggattttgcttattttccaagctggatcagt 115  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| |||| |||||||| |||||||||||| ||||||||| |||||||||    
T  28902451 ggacaacattggttgcttcctcaagcgcccttgcgtgtaactctaggcgcccaaatgcgggcataaaatggattttgcttgttttccaagttggatcagt 28902550  T
Q  116 gcataaagcctagttttcttctcttaaaccctaagtaaccatatgttattgatgataggtcatctt 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28902551 gcataaagcctagttttcttctcttaaaccctaagtaaccatatgttattgatgataggtcatctt 28902616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 208 - 386
Target Start/End: Original strand, 24850987 - 24851165
Alignment:
Q  208 cattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaatt 307  Q
    |||||| |||||||||| |||| | ||||||||||||||| ||  ||||||||||||||| | ||||||||||||||||||| ||||||||||| |||||    
T  24850987 catttttagtaggtttttcatccagaatagaggagtattataacaattgcttatgatttcagaacatttgtaatgttttctacatttgagtcatataatt 24851086  T
Q  308 atattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
     |||| ||||  ||||||||||||| || |||||||||||||||||||| || ||||||||||||||||||||||||||    
T  24851087 ctattcttcccaaaacatagcaattttaggatgttttgatgtaattcacaaataaatcatgcaaatcggcaaagcaaga 24851165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 215 - 388
Target Start/End: Complemental strand, 14077169 - 14076997
Alignment:
Q  215 agtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgt 314  Q
    ||||||||||||||| | || ||||||||||||||   |||||||||||||| |||||||||||||| |||||||||||||||| |||| ||| |||| |    
T  14077169 agtaggttttacatccagaaaagaggagtattagatcaattgcttatgattttgggacatttgtaatattttctatatttgagt-atgttattctattct 14077071  T
Q  315 tcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    |||| ||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  14077070 tcctaaaacatagcaattttatggtgttttgatgtaattcatgaagaaatcatgcaaatcgacaatgcaagaca 14076997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 165 - 388
Target Start/End: Complemental strand, 17835640 - 17835418
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    ||||| |||||||||||  |||||||||||||| ||  ||| | | |||||||||||||||||   | ||||| ||||||||||||  ||| ||||||||    
T  17835640 tgatggtaggtcatcttacgttattcttagtatatttttcagttaatttcagtaggttttacaagcagaatagtggagtattagaacaatttcttatgat 17835541  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaat 364  Q
    ||||||||||||||||  |||||||||||| |||  |||||||||||| |||||||||||||| |||| || ||||||||| ||||||||||||| ||||    
T  17835540 ttcgggacatttgtaacattttctatatttaagt-ttgtaattatattcttcctgaaacatagaaattttaggatgttttgttgtaattcacgaaaaaat 17835442  T
Q  365 catgcaaatcggcaaagcaagaca 388  Q
    |||||| ||| | |||||||||||    
T  17835441 catgcatatcagtaaagcaagaca 17835418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 184 - 388
Target Start/End: Original strand, 13833622 - 13833826
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    ||||||||| | |||||  ||| |||||||||||| | ||| |||| | ||||| |||||||||||   |||||||||||||||||||||||||||||||    
T  13833622 gttattctttgcatgtttttcagtcattttcagtatgcttttcatccataatagtggagtattagagcaattgcttatgatttcgggacatttgtaatgt 13833721  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagca 383  Q
    ||||||||||| |||||| |||||||| | ||||  ||||||| |||||||| | |||||||||||||||||| || ||||||||||| |||  ||||||    
T  13833722 tttctatattttagtcatataattatacttttcccaaaacataacaattctaaggtgttttgatgtaattcacaaataaatcatgcaactcgataaagca 13833821  T
Q  384 agaca 388  Q
    |||||    
T  13833822 agaca 13833826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 165 - 388
Target Start/End: Complemental strand, 14271938 - 14271715
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| ||||||||||  ||||||||||| |||||  |||| | |||||||||||||||||    |||| | ||||||||||||   ||||| ||||||    
T  14271938 tgatgacaggtcatcttacgttattcttagcatgtttttcaacctttttcagtaggttttactagcaaaacaaaggagtattagagtaattgcctatgat 14271839  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaa 363  Q
    || ||||||||||| ||||||||||||||||||| ||||||| | | | |||| ||||||||| |||| || | |||| |||||||||||||||||||||    
T  14271838 tttgggacatttgtgatgttttctatatttgagt-atgtaatcagagttttcccgaaacatagaaattttagggtgttcttgatgtaattcacgaagaaa 14271740  T
Q  364 tcatgcaaatcggcaaagcaagaca 388  Q
    |||||||||| ||||||||||||||    
T  14271739 tcatgcaaattggcaaagcaagaca 14271715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 184 - 388
Target Start/End: Original strand, 15058523 - 15058726
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    ||||||||||| |||||  | | ||||||| ||||||||||||||| |||||| | ||||||||||   |||||||||||||||||||||||  ||||||    
T  15058523 gttattcttagcatgttttttagtcatttttagtaggttttacatccaaaatataagagtattagagcaattgcttatgatttcgggacattgttaatgt 15058622  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagca 383  Q
    |||||||||||||||| | ||||| |||| ||||  ||||||||||||| || ||| ||||| ||||||||| |||||||||||| | ||| ||||||||    
T  15058623 tttctatatttgagtc-tttaattctattattcccaaaacatagcaattttaggatattttgttgtaattcatgaagaaatcatgtatatcagcaaagca 15058721  T
Q  384 agaca 388  Q
    |||||    
T  15058722 agaca 15058726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 380
Target Start/End: Original strand, 24518607 - 24518801
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    |||||||||||||||||  | | | ||||||||||||||||||||| | ||||||| |||||||     ||||||||||||||| | | |||||||||||    
T  24518607 gttattcttagtatgttttt-agttattttcagtaggttttacatccagaatagagaagtattaatgcaattgcttatgatttcagaatatttgtaatgt 24518705  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    ||||||||||| | || |||||||||||| ||||||||||||| ||||| || | |||||| ||||||||||| |||||||||||||||||||||||    
T  24518706 tttctatatttaattc-tgtaattatattcttcctgaaacataacaattttaaggtgttttcatgtaattcacaaagaaatcatgcaaatcggcaaa 24518801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 169 - 386
Target Start/End: Original strand, 15176436 - 15176652
Alignment:
Q  169 gataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttc 267  Q
    |||||||||||||   |||||||||| ||||   ||| ||| ||||||||||||||| || ||||||  ||||||||||||||  ||||| |||||||||    
T  15176436 gataggtcatcttacattattcttagcatgtgtttcagtcaatttcagtaggttttagcagcaaaaag-gaggagtattagaacgattgcctatgatttc 15176534  T
Q  268 gggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcat 367  Q
    ||||| ||||| |||||||||||||||||||| ||||||| || | ||||  ||||||||||||| || |   |||||| ||||||||||||||||||||    
T  15176535 gggacttttgttatgttttctatatttgagtc-tgtaattctagttttcccaaaacatagcaattttaggggtttttgaagtaattcacgaagaaatcat 15176633  T
Q  368 gcaaatcggcaaagcaaga 386  Q
    ||||||||||||| |||||    
T  15176634 gcaaatcggcaaatcaaga 15176652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 184 - 388
Target Start/End: Original strand, 30117677 - 30117881
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    |||||| |||| |||||  ||| ||||||||||||||||||||    |||| | |||| ||||||| | ||||  ||||||||||||| ||| ||| |||    
T  30117677 gttatttttagcatgtttttcattcattttcagtaggttttaccagcaaaacataggaatattagagaaattgtctatgatttcgggatattcgtattgt 30117776  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaatcggcaaagc 382  Q
    ||||||||||||||| |||||||| |||| ||||| ||||||||||||| || | |||| |||| |||||||||||||||||||||||||| ||||||||    
T  30117777 tttctatatttgagt-atgtaattctattcttccttaaacatagcaattttagggtgttcttgaggtaattcacgaagaaatcatgcaaattggcaaagc 30117875  T
Q  383 aagaca 388  Q
    ||||||    
T  30117876 aagaca 30117881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 165 - 387
Target Start/End: Original strand, 24381325 - 24381548
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcat-caatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| |||||||||| |||||||||||| |||||  | || ||| |||||| |||||||||    | || |||||||||||  ||  ||||| |||||    
T  24381325 tgatgacaggtcatcttaagttattcttagcatgttttttcagtcaatttcagcaggttttaccagcagaacagaggagtattttaacaattgcctatga 24381424  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaagaa 362  Q
     ||||| || |||||| ||||||||||||||||||| ||||||| |||| |||| | |||||||||||| || | |||||| ||||||||||||||||||    
T  24381425 cttcggtacttttgtattgttttctatatttgagtc-tgtaattctattattcccgtaacatagcaattttagggtgtttttgatgtaattcacgaagaa 24381523  T
Q  363 atcatgcaaatcggcaaagcaagac 387  Q
    |||||||||||||||||||||||||    
T  24381524 atcatgcaaatcggcaaagcaagac 24381548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 244 - 388
Target Start/End: Complemental strand, 17980811 - 17980667
Alignment:
Q  244 attagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttt 343  Q
    |||||||  |||||||||||||| |||||||||| ||||||||||||||||||||  |||| || |||| |||  ||||||||||||||||| |||||||    
T  17980811 attagaacaattgcttatgattttgggacatttgcaatgttttctatatttgagtt-tgtagttctattcttcacgaaacatagcaattctaggatgttt 17980713  T
Q  344 t-gatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    | ||||||||||||||| |||||||||||||||||||| |||||||    
T  17980712 ttgatgtaattcacgaaaaaatcatgcaaatcggcaaatcaagaca 17980667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 210 - 384
Target Start/End: Original strand, 19784825 - 19784999
Alignment:
Q  210 ttttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattat 309  Q
    |||| ||||||| |||||   ||||||||||||||| |||   ||||| ||| |||| |||| |||||||||||||||||||||||||| |||||||| |    
T  19784825 tttttagtaggtgttacaagcaaaatagaggagtataagagcaattgcctataattttgggatatttgtaatgttttctatatttgagt-atgtaattct 19784923  T
Q  310 attgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
     || ||||||||| ||||||||| || | |||||| ||||||||||||||||||||||||||||||| ||||||||    
T  19784924 gttcttcctgaaatatagcaattttagggtgtttttgatgtaattcacgaagaaatcatgcaaatcgacaaagcaa 19784999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 165 - 374
Target Start/End: Complemental strand, 20400431 - 20400222
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| ||||||||||  ||||||||||| ||| |  ||| ||||||||||| ||||||| || ||||||  ||||||||||||||  ||| | |||||    
T  20400431 tgatgacaggtcatcttacgttattcttagcatgcttttcagtcattttcagtgggttttagcagcaaaaag-gaggagtattagaacgatttcctatga 20400333  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaa 362  Q
    ||||||||| |||||||||||||||||||||||||  |||||||||| | |||| |||||||||||||| || |  | |||||| |||||||||||||||    
T  20400332 tttcgggacttttgtaatgttttctatatttgagt-ttgtaattatagttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaagaa 20400234  T
Q  363 atcatgcaaatc 374  Q
    |||| |||||||    
T  20400233 atcaagcaaatc 20400222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 164 - 386
Target Start/End: Complemental strand, 28621702 - 28621481
Alignment:
Q  164 ttgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatg 262  Q
    ||||||| |||||||||   ||||||||||| |||||  ||| | ||||||| ||||||||| ||| ||||| | | |||||||||||  ||||| ||||    
T  28621702 ttgatgacaggtcatctaacgttattcttagcatgtttttcagttattttcattaggttttagcataaaaaaga-atgagtattagaacgattgcctatg 28621604  T
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaa 362  Q
    |||||||||| ||| |||||||||||||||||||||| ||||||| || | ||| ||||||||||||||| || |   |||||| | |||||||||||||    
T  28621603 atttcgggacttttttaatgttttctatatttgagtc-tgtaattctagttttcttgaaacatagcaattttaggggtttttgaagaaattcacgaagaa 28621505  T
Q  363 atcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||| ||||| |||||    
T  28621504 atcatgcaaatccgcaaatcaaga 28621481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 174 - 381
Target Start/End: Original strand, 24380362 - 24380569
Alignment:
Q  174 gtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggaca 273  Q
    ||||||||  ||||||||||| |||||  ||| ||| ||||||||||||||||    | || |||||||||||||||  ||||| ||||||||||| |||    
T  24380362 gtcatcttacgttattcttagcatgtttttcactcaatttcagtaggttttaccagcagaacagaggagtattagaacaattgcctatgatttcggaaca 24380461  T
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaa 372  Q
    ||| || ||||||||||||||||||| ||||||| |||| ||||  ||||||||||||| || | |||| ||||||||||||| ||| |||||||||| |    
T  24380462 tttctattgttttctatatttgagtc-tgtaattctattcttcccaaaacatagcaattttagggtgttcttgatgtaattcatgaataaatcatgcata 24380560  T
Q  373 tcggcaaag 381  Q
    || ||||||    
T  24380561 tcagcaaag 24380569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 237 - 386
Target Start/End: Original strand, 24388444 - 24388592
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    ||||||||||||||  ||||| |||||||| ||||| ||||||||||||||||||||||| || |||||||||| | |||| |||||||||||||| ||     
T  24388444 gaggagtattagaacgattgcctatgattttgggacttttgtaatgttttctatatttga-tc-tgtaattatagttttcccgaaacatagcaattttag 24388541  T
Q  337 gatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |  | |||||| ||||||||||||||||||||||||||||||||| |||||    
T  24388542 ggggtttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaaga 24388592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 207 - 388
Target Start/End: Complemental strand, 5856834 - 5856654
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||| |||||||||||||    |||||||||| |||||||   |||| ||||| |||||||||||||||||||||||||| ||||||||| ||||||    
T  5856834 tcatttttagtaggttttacaagctaaatagaggaatattagatcaattgtttatggtttcgggacatttgtaatgttttctacatttgagtc-tgtaat 5856736  T
Q  307 tatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    | ||||  | |||||||||| |||||  | ||||||||| |||||||||||||||||| || || |||| |||| |||||||    
T  5856735 tctatttcttctgaaacataacaatttaaggatgttttgttgtaattcacgaagaaataatacatatcgacaaatcaagaca 5856654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 167 - 386
Target Start/End: Original strand, 24583173 - 24583392
Alignment:
Q  167 atgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatt 265  Q
    |||| ||||||| ||  ||||||||||| |||||  ||| ||||||| ||||| ||||| || ||||||  ||||||||||||||  ||||| |||||||    
T  24583173 atgacaggtcattttatgttattcttagcatgtttttcagtcatttttagtagattttagcagcaaaaag-gaggagtattagaacgattgcctatgatt 24583271  T
Q  266 tcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaat 364  Q
    ||||||| ||||||||||||||||||||||| |  ||||||| ||   ||||| ||||||||||||| || |  | |||||| |||||||||||| ||||    
T  24583272 tcgggacttttgtaatgttttctatatttgaat-ttgtaattctaggtttcctaaaacatagcaattttagggggtttttgaagtaattcacgaaaaaat 24583370  T
Q  365 catgcaaatcggcaaagcaaga 386  Q
    |||||||||||||||| |||||    
T  24583371 catgcaaatcggcaaatcaaga 24583392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 175 - 388
Target Start/End: Complemental strand, 22501920 - 22501708
Alignment:
Q  175 tcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacat 274  Q
    |||||||  ||||||||||  |||||  |||||| |||||||| ||||||||    |||| ||||||||||||||   || || |||||||| | || ||    
T  22501920 tcatcttacgttattcttatcatgtttttcaatctttttcagttggttttaccagcaaaacagaggagtattagagtaatcgcctatgattttgaga-at 22501822  T
Q  275 ttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaat 373  Q
    |||||||| |||||||||||||||| |||||| | | | |||| |||||||| ||||| || | |||| ||||||||||||||||| |||||||||||||    
T  22501821 ttgtaatgctttctatatttgagtc-tgtaatcagagttttcccgaaacataacaattttagggtgttcttgatgtaattcacgaataaatcatgcaaat 22501723  T
Q  374 cggcaaagcaagaca 388  Q
    |||||||||||||||    
T  22501722 cggcaaagcaagaca 22501708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 210 - 388
Target Start/End: Complemental strand, 30487903 - 30487720
Alignment:
Q  210 ttttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctat------atttgagtcatgt 303  Q
    |||||||||||||||||| | |||||||| ||||||||||   |||||||||||||| ||||| || |||||||||| | |      ||||||||| ||     
T  30487903 ttttcagtaggttttacaaccaaaatagatgagtattagagcaattgcttatgatttagggacgttagtaatgtttttttttttattatttgagtc-tga 30487805  T
Q  304 aattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    ||||||||| |||| |||||| | ||||| || ||||||||| ||||||||||||| |||||||||| ||||||||| |||||||    
T  30487804 aattatattcttcccgaaacacaacaattttaggatgttttgttgtaattcacgaaaaaatcatgcatatcggcaaaacaagaca 30487720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 380
Target Start/End: Complemental strand, 6886720 - 6886550
Alignment:
Q  210 ttttcagtaggttttac-atcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaatta 308  Q
    |||| |||||||||||| ||||||| |||||||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  6886720 tttttagtaggttttaccatcaaaa-tagaggagtattagagtaattgcctatgatttcgggacatttgtaatgttttctatatttgagtc-tgtaatca 6886623  T
Q  309 tattgttcctgaaacatagcaattctatgat-gttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
     | | ||||||||||||| ||||| || | | || ||| |||||||||| ||||||||| || ||| ||||||    
T  6886622 gagttttcctgaaacatatcaattttagggtggtcttgttgtaattcacaaagaaatcacgctaattggcaaa 6886550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 165 - 386
Target Start/End: Complemental strand, 19265919 - 19265698
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| ||||||||||  ||||||||||| |||||  ||| |   ||| |||||| |||| || ||||||  ||||||||||||||  ||||| |||||    
T  19265919 tgatgacaggtcatcttacgttattcttagcatgtttttcagtttattttagtaggatttaacaacaaaaag-gaggagtattagaacaattgcctatga 19265821  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaa 362  Q
    ||||||||| ||||||||||| ||||||||||| || ||||||| || | |||| |||||||||||||| || |  | |||||| |||||||||||||||    
T  19265820 tttcgggacttttgtaatgttgtctatatttgaatc-tgtaattctagttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaagaa 19265722  T
Q  363 atcatgcaaatcggcaaagcaaga 386  Q
    |||||||| ||||| ||| |||||    
T  19265721 atcatgcatatcgggaaatcaaga 19265698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 165 - 386
Target Start/End: Complemental strand, 24389853 - 24389632
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| ||||||||||  ||||||||||||| |||  | | | ||||||||||||||||| || ||||||| ||||||||||||||  ||||| ||| |    
T  24389853 tgatgacaggtcatcttacgttattcttagtaagttttttagttattttcagtaggttttagcaacaaaaat-gaggagtattagaacaattgcctataa 24389755  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaagaa 362  Q
    ||| ||||  ||||||| |||||||||||||||||  |||| ||| | | |||| ||||||||||| || ||  | | |||||| |||||||||||||||    
T  24389754 ttttgggaattttgtaaagttttctatatttgagt-ttgtacttagagttttcccgaaacatagcatttttaggggttttttgaagtaattcacgaagaa 24389656  T
Q  363 atcatgcaaatcggcaaagcaaga 386  Q
    ||||||||||| |||||| |||||    
T  24389655 atcatgcaaattggcaaatcaaga 24389632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 164 - 388
Target Start/End: Complemental strand, 28858933 - 28858710
Alignment:
Q  164 ttgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatga 263  Q
    ||||||| ||| ||||||   |||||||||| |||||  ||| ||||||| |||||||||||||   | ||||||||| ||||| |   |||||||||||    
T  28858933 ttgatgacaggccatcttacattattcttagcatgttt-tcagtcatttttagtaggttttacaagcagaatagagga-tattatatcaattgcttatga 28858836  T
Q  264 tttcgggacatttgtaatgttttctatattt-gagtcatgtaattatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaaga 361  Q
    |||||||| ||||  |||||||| |  |||| || || |||||||||||| ||| |||||||| |||||||||| ||||||| |||||||||||||||||    
T  28858835 tttcgggatattttgaatgttttatcaattttgaatc-tgtaattatattcttcttgaaacatggcaattctataatgtttttgatgtaattcacgaaga 28858737  T
Q  362 aatcatgcaaatcggcaaagcaagaca 388  Q
    |||||| || ||||||||| |||||||    
T  28858736 aatcatacagatcggcaaatcaagaca 28858710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 262 - 380
Target Start/End: Original strand, 35861559 - 35861676
Alignment:
Q  262 gatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaaga 361  Q
    |||||||||| ||| |||||||||||||||||| |||||||||||| || | || |  |||||||||||| ||| | |||||||||||||||||| ||||    
T  35861559 gatttcgggatattcgtaatgttttctatatttaagtcatgtaattctactttttccaaaacatagcaat-ctagggtgttttgatgtaattcacaaaga 35861657  T
Q  362 aatcatgcaaatcggcaaa 380  Q
    |||||||||||||||||||    
T  35861658 aatcatgcaaatcggcaaa 35861676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 380
Target Start/End: Original strand, 24090897 - 24091092
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatg 282  Q
    ||||||||||| |||||  ||| | ||||| | ||||||||| || ||||||  || |||||||||||  ||||| ||||||||||||||  ||||||||    
T  24090897 gttattcttagcatgtttttcagttattttaattaggttttagcagcaaaaag-gaagagtattagaacaattgcctatgatttcgggactcttgtaatg 24090995  T
Q  283 ttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    ||||||||||||||||| ||||||| || | |||   ||||||||||||| || |  | ||||| |||||||||||||||||||||||||| ||||||    
T  24090996 ttttctatatttgagtc-tgtaattctagttttctcaaaacatagcaattttaggggggtttgaagtaattcacgaagaaatcatgcaaattggcaaa 24091092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 386
Target Start/End: Complemental strand, 26139887 - 26139664
Alignment:
Q  163 attgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttat 261  Q
    |||||||| ||||||||||  ||||||||||| |||||  |||||   ||| ||||||   || |||||||||  ||||||||||||||  ||||| |||    
T  26139887 attgatgaaaggtcatcttacgttattcttagcatgtttttcaatttattttagtaggaaatagcatcaaaaag-gaggagtattagaacgattgcctat 26139789  T
Q  262 gatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaag 360  Q
    |||||||| || |||||||||||||||||||||||||  |||||||  | | ||||  |||||||||||||  | |  | |||||| |||||||||||||    
T  26139788 gatttcggaacttttgtaatgttttctatatttgagt-ttgtaattcaagttttcccaaaacatagcaatttaagggggtttttgaagtaattcacgaag 26139690  T
Q  361 aaatcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||||||||||| |||||    
T  26139689 aaatcatgcaaatcggcaaatcaaga 26139664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 230 - 381
Target Start/End: Complemental strand, 17649834 - 17649683
Alignment:
Q  230 aaaaatagaggagtattagaaacattgcttatgatttcgggacattt-gtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagc 328  Q
    ||||| ||||||||||||||   ||| | ||||||||  |||||||| ||||| ||||||||||| |||||||| || | || | |||  |||||||| |    
T  17649834 aaaaagagaggagtattagagtaattccctatgattttaggacattttgtaatattttctatatt-gagtcatggaactctacttttctcgaaacatatc 17649736  T
Q  329 aattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaag 381  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  17649735 aattctaggatgttttgatgtaatttacgaagaaatcatgcaaatcggcaaag 17649683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 220 - 332
Target Start/End: Complemental strand, 24750869 - 24750757
Alignment:
Q  220 gttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctg 319  Q
    ||||| |||||| ||||||||||||||||||  |||| |||||||||| ||||| |||||||||||| |||||||||||||||||||||||   |||| |    
T  24750869 gtttttcatcaagaatagaggagtattagaacaattgattatgatttcaggacacttgtaatgttttatatatttgagtcatgtaattatagctttcccg 24750770  T
Q  320 aaacatagcaatt 332  Q
    ||| |||||||||    
T  24750769 aaaaatagcaatt 24750757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 388
Target Start/End: Complemental strand, 24908982 - 24908774
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    |||||| |||| |||||  ||||||| ||||| |||||||||||   | ||| ||||| |||||||   ||| ||| ||||||||  |||||||||||||    
T  24908982 gttatttttagcatgtttttcaatcaatttcaataggttttacaagcagaatggaggaatattagatcaattacttttgatttcgaaacatttgtaatgt 24908883  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgt----tttgatgt-aattcacgaagaaatcatgcaaatcggca 378  Q
    |||||||||||||||  ||||||| |||| ||||  ||||||||||||| ||||||||    ||||  || |||||||||||| |||||||| |||||||    
T  24908882 tttctatatttgagt-ttgtaattctattattcccaaaacatagcaattttatgatgtttaatttgtggtaaattcacgaagagatcatgcatatcggca 24908784  T
Q  379 aagcaagaca 388  Q
    ||||||||||    
T  24908783 aagcaagaca 24908774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 388
Target Start/End: Complemental strand, 24911203 - 24910995
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    |||||| |||| |||||  ||||||| ||||| |||||||||||   | ||| ||||| |||||||   ||| ||| ||||||||  |||||||||||||    
T  24911203 gttatttttagcatgtttttcaatcaatttcaataggttttacaagcagaatggaggaatattagatcaattacttttgatttcgaaacatttgtaatgt 24911104  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgt----tttgatgt-aattcacgaagaaatcatgcaaatcggca 378  Q
    |||||||||||||||  ||||||| |||| ||||  ||||||||||||| ||||||||    ||||  || |||||||||||| |||||||| |||||||    
T  24911103 tttctatatttgagt-ttgtaattctattattcccaaaacatagcaattttatgatgtttaatttgtggtaaattcacgaagagatcatgcatatcggca 24911005  T
Q  379 aagcaagaca 388  Q
    ||||||||||    
T  24911004 aagcaagaca 24910995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 231 - 386
Target Start/End: Original strand, 26829532 - 26829687
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    ||||| |||||||| |||||  ||||| |||||||||||||| |||||||| |||||||||||||| | |||||||| || | |||  ||||||||||||    
T  26829532 aaaatggaggagtaatagaacgattgcctatgatttcgggacttttgtaatattttctatatttga-ttatgtaattctagttttctcgaaacatagcaa 26829630  T
Q  331 ttcta-tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    ||  |  |  |||||||  ||||||||||||||||||||||||||||||||||||||    
T  26829631 tttgaggggggttttgaaataattcacgaagaaatcatgcaaatcggcaaagcaaga 26829687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 363
Target Start/End: Complemental strand, 15557387 - 15557288
Alignment:
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaa 363  Q
    ||||||||||||||||| ||||||||| |||||||||||||||| |||| |||| ||| ||||| |||| || | |||||||||||||||||||||||||    
T  15557387 tttcgggacatttgtaaggttttctatgtttgagtcatgtaattctattcttcccgaaccatagtaattttagggtgttttgatgtaattcacgaagaaa 15557288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 163 - 386
Target Start/End: Original strand, 4007149 - 4007373
Alignment:
Q  163 attgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatg 262  Q
    |||||||| ||||||||||  |||| | |||| |||||  ||| ||||||| ||||||||| ||    |||||||||||||||||||   ||||   |||    
T  4007149 attgatgacaggtcatcttatgttaatattagcatgtttttcagtcatttttagtaggtttcaccagcaaaatagaggagtattagatcaattgtcaatg 4007248  T
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaaga 361  Q
    |||| | ||| |||||| |||||||||||||| |||| ||||||| |||| |||| |||||||||||||| || | |||| |||||| ||||||||||||    
T  4007249 attttgagacgtttgtattgttttctatatttaagtc-tgtaattctattcttcccgaaacatagcaattttagggtgttcttgatgaaattcacgaaga 4007347  T
Q  362 aatcatgcaaa-tcggcaaagcaaga 386  Q
    |||||  |||| | ||||||||||||    
T  4007348 aatcaaacaaattaggcaaagcaaga 4007373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 238 - 386
Target Start/End: Complemental strand, 30832963 - 30832815
Alignment:
Q  238 aggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatg 337  Q
    ||||||||||||   ||||  ||||||||| | |||||||||||||||||||| |||||||  ||||||| || | || | |||||||||||||| || |    
T  30832963 aggagtattagagcaattgtctatgatttcagaacatttgtaatgttttctatgtttgagtt-tgtaattctagtttttccgaaacatagcaattttagg 30832865  T
Q  338 atgtttt-gatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    | ||||| || ||||||||||||||||||||||||||||||||| |||||    
T  30832864 aggtttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaaga 30832815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 184 - 298
Target Start/End: Original strand, 13313290 - 13313404
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatg 282  Q
    ||||||||||| |||||  ||| ||||||||| ||||||||| || ||||||  ||||||||||||||  ||||| |||||||||||||| |||||||||    
T  13313290 gttattcttagcatgtttttcagtcattttcaataggttttagcagcaaaaag-gaggagtattagaacaattgcctatgatttcgggacttttgtaatg 13313388  T
Q  283 ttttctatatttgagt 298  Q
    ||||||||||||||||    
T  13313389 ttttctatatttgagt 13313404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 165 - 386
Target Start/End: Original strand, 23867829 - 23868050
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| ||||||||||  || ||||||||||||||  |||  |||||| ||||||||||| || |||| |  ||||||||||||||  ||||| |||||    
T  23867829 tgatgacaggtcatcttacgtaattcttagtatgtttttcaggcatttttagtaggttttagcagcaaagac-gaggagtattagaacgattgcctatga 23867927  T
Q  264 tttcgggacatttgtaatg-ttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaa 362  Q
    ||||||||| ||||||||| |||| |||||||||||  ||| ||| || | ||||  ||| |||| |||  || ||  |||||| |||||||||||||||    
T  23867928 tttcgggacttttgtaatgtttttttatatttgagt-ttgtcattctagttttcccaaaatatagtaatcttaagagtttttgaagtaattcacgaagaa 23868026  T
Q  363 atcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||| ||||| |||||    
T  23868027 atcatgcaaatcagcaaatcaaga 23868050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 231 - 375
Target Start/End: Original strand, 25481571 - 25481716
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    ||||| ||||||||||||||  ||||| ||||||||||  || |||||||||||||||||||||||||| ||||||| || | |||| |||||||| |||    
T  25481571 aaaatggaggagtattagaacgattgcctatgatttcgaaacttttgtaatgttttctatatttgagtc-tgtaattctagttttccagaaacatatcaa 25481669  T
Q  331 ttcta--tgatgttttgatgtaattcacgaagaaatcatgcaaatcg 375  Q
    ||  |   |  ||||||| ||||||||||||||||||||||||||||    
T  25481670 tttgagggggggttttgaagtaattcacgaagaaatcatgcaaatcg 25481716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 236 - 372
Target Start/End: Complemental strand, 19791419 - 19791283
Alignment:
Q  236 agaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta 335  Q
    |||||||||||| ||  ||||  ||||||||||||||||||||||| |||| |||||||||||| |||||||  ||| ||||| ||||||||||||| ||    
T  19791419 agaggagtattaaaacaattgtctatgatttcgggacatttgtaatattttttatatttgagtc-tgtaatttgattcttcctaaaacatagcaatttta 19791321  T
Q  336 tgatgtt-ttgatgtaattcacgaagaaatcatgcaaa 372  Q
    |   ||| |||| ||||||||||||||||||| |||||    
T  19791320 tagggttcttgaagtaattcacgaagaaatcaagcaaa 19791283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 231 - 386
Target Start/End: Complemental strand, 17998285 - 17998130
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    |||| |||||||| ||||||  ||||| ||||||||| |||| |||||||||||||||||||| ||||| ||||||| || | ||||  |||||||  ||    
T  17998285 aaaaaagaggagtgttagaacgattgcctatgatttcaggacttttgtaatgttttctatattcgagtc-tgtaattttagttttccctaaacataataa 17998187  T
Q  331 ttcta-tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    || ||  | | |||||| ||||||||| ||||||||||||||||||||||| |||||    
T  17998186 ttttaggggttttttgaagtaattcacaaagaaatcatgcaaatcggcaaatcaaga 17998130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 185 - 380
Target Start/End: Complemental strand, 18836869 - 18836677
Alignment:
Q  185 ttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgattt-cgggacatttgtaatgt 283  Q
    |||||||||| |||||  ||||||||||| |||  ||||| |||| | |||| |||||||||||||   ||| ||||| ||| | |||||||||||||||    
T  18836869 ttattcttagcatgtttttcaatcattttaagttagtttt-catccataatataggagtattagaacatttgtttatggttttcaggacatttgtaatgt 18836771  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    || ||||| |||||||||||||||||| | ||||  ||||||||  |||||| | ||||||||||||||| | |||| |||||||| ||||||||||    
T  18836770 ttactata-ttgagtcatgtaattatacttttccaaaaacatag-tattctagggtgttttgatgtaatt-aagaagtaatcatgccaatcggcaaa 18836677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 263 - 388
Target Start/End: Complemental strand, 2638719 - 2638593
Alignment:
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaaga 361  Q
    |||| ||||||||||||||||||||||||||| ||| |||||||  |||| |||| |||||||||||||| || | |||| || | ||||||||||||||    
T  2638719 attttgggacatttgtaatgttttctatatttaagt-atgtaatactattcttcccgaaacatagcaattttagggtgttcttaaagtaattcacgaaga 2638621  T
Q  362 aatcatgcaaatc-ggcaaagcaagaca 388  Q
    |||||  |||||| ||||||||||||||    
T  2638620 aatcaaacaaatcaggcaaagcaagaca 2638593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 165 - 386
Target Start/End: Complemental strand, 17511001 - 17510776
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||||||||||||||   |||||||||| |||||  ||| ||| |||||||||||||||  |  ||||  ||||||||||||||  ||||| ||||||    
T  17511001 tgatgataggtcatcttacattattcttagcatgtttttcagtcactttcagtaggttttagctgcaaaaaggaggagtattagaacgattgcctatgat 17510902  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-------tgatgttttgatgtaattcacg 357  Q
    ||||| || ||| ||||||||||  |||||||||| ||||||| || | |||| |||||||||||| | ||        |  || |||| ||||||||||    
T  17510901 ttcggaacttttataatgttttc--tatttgagtc-tgtaattctagttttcccgaaacatagcaactttaggggcgggggggtgttgaagtaattcacg 17510805  T
Q  358 aagaaatcatgcaaatcggcaaagcaaga 386  Q
    ||||| ||||||||||||||||| |||||    
T  17510804 aagaagtcatgcaaatcggcaaatcaaga 17510776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 274 - 388
Target Start/End: Complemental strand, 7985105 - 7984990
Alignment:
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaa 372  Q
    |||||||||||| |||||||| ||| |||||||| |||| |||  |||||||||||||| || | |||| |||| ||||||||||||||||||| |||||    
T  7985105 tttgtaatgtttactatattttagt-atgtaattctattcttctcgaaacatagcaattttagggtgttcttgaagtaattcacgaagaaatcaagcaaa 7985007  T
Q  373 tc-ggcaaagcaagaca 388  Q
    || ||||||||||||||    
T  7985006 tcaggcaaagcaagaca 7984990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 380
Target Start/End: Original strand, 24109107 - 24109249
Alignment:
Q  238 aggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatg 337  Q
    ||||||||||||   ||| | |||||||||||||| |||| ||||||||||||||||||||| ||||||| || | ||||   |||||||||||| || |    
T  24109107 aggagtattagagcaatttcctatgatttcgggacttttgaaatgttttctatatttgagtc-tgtaattctagttttcccagaacatagcaattttagg 24109205  T
Q  338 atg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
      | |||||| ||||||||| |||||||||||||||||| ||||    
T  24109206 gggtttttgaagtaattcacaaagaaatcatgcaaatcgacaaa 24109249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 380
Target Start/End: Complemental strand, 18570532 - 18570411
Alignment:
Q  259 tatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacg 357  Q
    ||||||||| | || |||||||||||||||||||||||||| ||||||| || | ||||  |||||||||||||  | |  | |||||| ||||||||||    
T  18570532 tatgatttcagaacttttgtaatgttttctatatttgagtc-tgtaattctagttttcccaaaacatagcaatttgagggggtttttgaagtaattcacg 18570434  T
Q  358 aagaaatcatgcaaatcggcaaa 380  Q
    |||||||||||||||| ||||||    
T  18570433 aagaaatcatgcaaattggcaaa 18570411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 263 - 386
Target Start/End: Complemental strand, 21230924 - 21230801
Alignment:
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatga-tgttttgatgtaattcacgaaga 361  Q
    |||| |||| |||||||||||||| ||||||| |||  ||||||| || | ||||||||||||||||||| || |  | |||||| ||||||||||||||    
T  21230924 attttgggatatttgtaatgttttttatattttagtt-tgtaattctagttttcctgaaacatagcaattttaggggttttttgaagtaattcacgaaga 21230826  T
Q  362 aatcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||| || ||| |||||    
T  21230825 aatcatgcaaataggaaaatcaaga 21230801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 263 - 386
Target Start/End: Complemental strand, 21316782 - 21316659
Alignment:
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaaga 361  Q
    |||| ||||| | |||||||||||||||||||||||| | ||||| || | |||| |||||||||||||| || |  ||||| || ||||||||||||||    
T  21316782 attttgggacttatgtaatgttttctatatttgagtc-tataattctagttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaaga 21316684  T
Q  362 aatcatgcaaatcggcaaagcaaga 386  Q
    ||||||| |||| |||||| |||||    
T  21316683 aatcatggaaattggcaaatcaaga 21316659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 386
Target Start/End: Original strand, 29765391 - 29765613
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaa-tcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatg 262  Q
    |||||| ||||||||||  ||||||||||| |||||  |  | | ||||||||||||||||| || ||||||  || | |||||||||  ||||| ||||    
T  29765391 tgatgacaggtcatcttacgttattcttagcatgtttttttagttattttcagtaggttttagcagcaaaaag-gaagtgtattagaacgattgcctatg 29765489  T
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaaga 361  Q
    |||| || || ||| |||| ||||||||||||||||| | ||||| || | |||   ||| ||||||||| || |  | |||||| ||||||||||||||    
T  29765490 attttggtacctttttaatattttctatatttgagtc-tctaattctagttttctctaaagatagcaattttagggggattttgaagtaattcacgaaga 29765588  T
Q  362 aatcatgcaaatcggcaaagcaaga 386  Q
    ||||||||||||||||||| |||||    
T  29765589 aatcatgcaaatcggcaaatcaaga 29765613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 165 - 299
Target Start/End: Original strand, 18446859 - 18446993
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||||||||||||||  |||||| |||  |||||  ||| | |||| ||||||| |||| || ||||||  |||||||||||||| |||| | |||||    
T  18446859 tgatgataggtcatcttacgttatttttaccatgtttttcagttatttccagtaggatttagcagcaaaaag-gaggagtattagaaccatttcctatga 18446957  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtc 299  Q
    |||||| || ||||||||||||||||| ||||||||    
T  18446958 tttcggaacttttgtaatgttttctatgtttgagtc 18446993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 6286288 - 6286219
Alignment:
Q  259 tatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagca 329  Q
    ||||||||||||||||||||||| |||| |||||||||||| ||||||| |||| |||| |||||||||||    
T  6286288 tatgatttcgggacatttgtaatcttttttatatttgagtc-tgtaattctattattcccgaaacatagca 6286219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 372
Target Start/End: Complemental strand, 18007591 - 18007426
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||||||||||||||||    ||||| | ||| ||||||||  ||||  |||||  |||  |||||||||||||||||| |||||||||  ||||||    
T  18007591 tcattttcagtaggttttaccaacaaaatggtggaatattagaacaattgtctatgacatcgaaacatttgtaatgttttctttatttgagtt-tgtaat 18007493  T
Q  307 tatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaagaaatcatgcaaa 372  Q
    |  ||| |||  |||||| |||||| ||| | |||||| ||||||||||||||||||||||| ||||    
T  18007492 ttcattcttctcgaaacaaagcaatcctagggtgtttttgatgtaattcacgaagaaatcatacaaa 18007426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 209 - 386
Target Start/End: Complemental strand, 26888539 - 26888362
Alignment:
Q  209 attttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaatt 307  Q
    ||||| ||||||||||| || ||||||  |||||||||| |||  ||||  |||||||| ||||| ||||||||| ||| |||||||||||| |||||||    
T  26888539 atttttagtaggttttagcaacaaaaag-gaggagtattggaacgattgtctatgattttgggacttttgtaatggtttttatatttgagtc-tgtaatt 26888442  T
Q  308 atattgttcctgaaacatagcaattctatgatg--ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    ||  | |||| |||||||||||||| || || |  |||| | |||||||| |||||||||||| ||||| ||||| |||||    
T  26888441 atggttttcccgaaacatagcaatttta-gagggtttttcaagtaattcatgaagaaatcatgtaaatcagcaaatcaaga 26888362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 37527096 - 37527192
Alignment:
Q  235 tagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaatt 332  Q
    |||| ||||||||||   ||||| |||| |||||||||||||||||||||||||||||||||||| | ||||| |||| ||||  || ||||||||||    
T  37527096 tagatgagtattagagcaattgcctatggtttcgggacatttgtaatgttttctatatttgagtc-tataattctattcttcccaaagcatagcaatt 37527192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 165 - 328
Target Start/End: Original strand, 17100206 - 17100368
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| |||||||||  |||||||||||| |||||  ||||| |||||||  |||||||| || ||||||  ||| |||||| |||  |||||  ||||    
T  17100206 tgatgacaggtcatctcaagttattcttagcatgtttttcaattattttcataaggttttagcagcaaaaag-gagaagtatttgaatgattgccaatga 17100304  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagc 328  Q
    |||||| || ||| |||||||||||||||||||||| ||||||| || | ||||  |||||||||    
T  17100305 tttcggaacttttataatgttttctatatttgagtc-tgtaattctagttttcccaaaacatagc 17100368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 274 - 384
Target Start/End: Complemental strand, 20268376 - 20268268
Alignment:
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaat 373  Q
    |||||||||||||| || || ||||||||||||| || | | ||||||||||| ||||| || | ||||||||| ||| ||| ||||||||||||| |||    
T  20268376 tttgtaatgttttc-at-ttcgagtcatgtaattctagtttccctgaaacataacaattttagggtgttttgatataagtcaagaagaaatcatgccaat 20268279  T
Q  374 cggcaaagcaa 384  Q
    | |||||||||    
T  20268278 cagcaaagcaa 20268268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 274 - 384
Target Start/End: Complemental strand, 21055005 - 21054897
Alignment:
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaat 373  Q
    |||||||||||||| || || ||||||||||||| || | | ||||||||||| ||||| || | ||||||||| ||| ||| ||||||||||||| |||    
T  21055005 tttgtaatgttttc-at-ttcgagtcatgtaattctagtttccctgaaacataacaattttagggtgttttgatataagtcaagaagaaatcatgccaat 21054908  T
Q  374 cggcaaagcaa 384  Q
    | |||||||||    
T  21054907 cagcaaagcaa 21054897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 320 - 381
Target Start/End: Complemental strand, 17976180 - 17976119
Alignment:
Q  320 aaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaag 381  Q
    |||||||||| ||||  | |||||||||||||||||  ||||||||||||||||||||||||    
T  17976180 aaacatagcatttcttgggtgttttgatgtaattcaataagaaatcatgcaaatcggcaaag 17976119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 374
Target Start/End: Complemental strand, 24091808 - 24091704
Alignment:
Q  270 gacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatg 368  Q
    ||||||| |||||||||||||| |||||| |||||||| |||| |||| |||||| ||||||| || | |||| ||||  |||||||||||||||| | |    
T  24091808 gacatttttaatgttttctataattgagt-atgtaattctattcttcccgaaacaaagcaattttagggtgttcttgaactaattcacgaagaaataaag 24091710  T
Q  369 caaatc 374  Q
    ||||||    
T  24091709 caaatc 24091704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 236 - 371
Target Start/End: Original strand, 25180792 - 25180927
Alignment:
Q  236 agaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta 335  Q
    ||||||||||||||   ||||| |||||||||||||| || |||||||||||||||||| |||| | ||||| |||| | | ||||| |||| |||| ||    
T  25180792 agaggagtattagatcaattgcctatgatttcgggacgttcgtaatgttttctatatttaagtc-tataattctattctacgtgaaagatagaaatttta 25180890  T
Q  336 -tgatgttttgatgtaattcacgaagaaatcatgcaa 371  Q
      |   | |||||||||||||||||||||||| ||||    
T  25180891 gagcattcttgatgtaattcacgaagaaatcaagcaa 25180927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 164
Target Start/End: Complemental strand, 16052007 - 16051933
Alignment:
Q  90 ttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaaccatatgttat 164  Q
    |||||| |||| ||||||||||| ||| | ||| | |||||||||||||||||||||||  ||| ||||||||||    
T  16052007 ttgcttgtttttcaagctggatcggtggaaaaaacttagttttcttctcttaaaccctatttaatcatatgttat 16051933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 265
Target Start/End: Complemental strand, 19705083 - 19704983
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttt-acatcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| | ||||||||  |||||||||||||||||  ||| |||||||||||||||||| ||| || ||| | |||||||||||||  ||||| |||||    
T  19705083 tgatgacatgtcatcttacgttattcttagtatgtttttcagtcattttcagtaggttttaacagcataaaga-aggagtattagaacgattgcctatga 19704985  T
Q  264 tt 265  Q
    ||    
T  19704984 tt 19704983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 298
Target Start/End: Original strand, 28275423 - 28275455
Alignment:
Q  266 tcgggacatttgtaatgttttctatatttgagt 298  Q
    |||||||||||||||||||||||||||||||||    
T  28275423 tcgggacatttgtaatgttttctatatttgagt 28275455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 15213461 - 15213390
Alignment:
Q  89 tttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaaccatatg 160  Q
    ||||||| ||||||||||| |||  ||||| |||||  |||||||||||||| |||| ||||||| ||||||    
T  15213461 tttgcttgttttccaagcttgattggtgcaaaaagctcagttttcttctcttcaaccataagtaatcatatg 15213390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 120 - 155
Target Start/End: Complemental strand, 29046979 - 29046944
Alignment:
Q  120 aaagcctagttttcttctcttaaaccctaagtaacc 155  Q
    ||||||||||||||||||||||| ||||||||||||    
T  29046979 aaagcctagttttcttctcttaacccctaagtaacc 29046944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 326
Target Start/End: Complemental strand, 34499237 - 34499172
Alignment:
Q  260 atgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacata 326  Q
    ||||||| | || ||||||||||||||||||||||||||| | |||||||| | |||| ||||||||    
T  34499237 atgattttgagaaatttgtaatgttttctatatttgagtc-tataattatagtcttcccgaaacata 34499172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 371
Target Start/End: Original strand, 12342984 - 12343096
Alignment:
Q  260 atgatttcgggacatttgtaatgttttct-atatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacg 357  Q
    ||||||| ||||||||||| ||||||| | |||||||| || ||| ||| |||| |||   ||||||| ||||| || | |||| |||||||||||||||    
T  12342984 atgattttgggacatttgttatgtttttttatatttgaatc-tgtgattctattcttctcaaaacataacaattttagggtgttcttgatgtaattcacg 12343082  T
Q  358 aagaaatcatgcaa 371  Q
    ||||||||| ||||    
T  12343083 aagaaatcaagcaa 12343096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 386
Target Start/End: Complemental strand, 18822512 - 18822467
Alignment:
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |||||| |||||||||||||||||||||||||| || ||| |||||    
T  18822512 ttttgaagtaattcacgaagaaatcatgcaaattggaaaatcaaga 18822467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 386
Target Start/End: Original strand, 24520176 - 24520221
Alignment:
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |||||| |||||||||||| || ||||||||||||||||| |||||    
T  24520176 ttttgaagtaattcacgaataagtcatgcaaatcggcaaatcaaga 24520221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 196; Significance: 1e-106; HSPs: 75)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 42 - 388
Target Start/End: Original strand, 32130576 - 32130923
Alignment:
Q  42 gcccttgcgtgtaactctaggcgcccagatgcaggcataaagtggattttgcttattttccaagctggatcagtgcataaagcctagttttcttctctta 141  Q
    |||| |||||||||||| | ||||||| |||| |||||||||||| ||| |||| |||||||||||||||  ||||| ||||||||||||||||||||||    
T  32130576 gcccctgcgtgtaactccatgcgcccatatgcgggcataaagtggttttcgcttcttttccaagctggatttgtgcaaaaagcctagttttcttctctta 32130675  T
Q  142 aaccctaagtaaccatatgttattgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagagga 241  Q
    ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| |||| ||||||| |||| |||||||||| | ||||||| |    
T  32130676 aaccctaagtaaccatatgttattgatgacaggtcatcttacgttattcttagtatgtttatcagtcatttttagtaagttttacatccagaatagagaa 32130775  T
Q  242 gtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctg-aaacatagcaattctatgatg 340  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||| ||||  |||||||| | |||| |||| | ||||||| ||||| || ||||    
T  32130776 gtattagtaatattgcttatgatttcgggacatttgtaatgttttctatgtttgtatcatgtaactctattcttcccgaaaacataacaattataggatg 32130875  T
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    |||||||||||||||| |||||||||| |||||||||||| |||||||    
T  32130876 ttttgatgtaattcacaaagaaatcatacaaatcggcaaaacaagaca 32130923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 16 - 386
Target Start/End: Original strand, 32137763 - 32138134
Alignment:
Q  16 ggacatcattggttgctgcctcaggcgcccttgcgtgtaactctaggcgcccagatgcaggcataaagtggattttgcttattttccaagctggatcagt 115  Q
    ||||| ||| ||||||| || ||||||||| ||| ||||||||   ||||||| |||| |||||||||||| | |||||| |||||||||||||||  ||    
T  32137763 ggacaacatcggttgcttccccaggcgcccctgcttgtaactccttgcgcccatatgcgggcataaagtggttattgcttgttttccaagctggatttgt 32137862  T
Q  116 gcataaagcctagttttcttctcttaaaccctaagtaaccatatgttattgatgataggtcatcttgagttattcttagtatgttcatcaatcattttca 215  Q
    ||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||| |||| ||||||| |    
T  32137863 gcaaaaagcctagttttgttctcttaatccctaagtaaccatatgttattgatgacaggtcatcttacgttattcttattatgtttatcagtcattttta 32137962  T
Q  216 gtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgtt 315  Q
    |||||||||||||| | |||||||||||||||| ||||||||||||||||||| |||||||||||  |||||||||||||  |||||||| | |||| ||    
T  32137963 gtaggttttacatccagaatagaggagtattagtaacattgcttatgatttcgtgacatttgtaacattttctatatttgtatcatgtaactctattctt 32138062  T
Q  316 cctg-aaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    || | ||||||| ||||| || |||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  32138063 cccgaaaacataacaattataggatgttttgacgtaattcacgaagaaatcatgcaaatcggcaaaacaaga 32138134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 16 - 353
Target Start/End: Original strand, 32139185 - 32139523
Alignment:
Q  16 ggacatcattggttgctgcctcaggcgcccttgcgtgtaactctaggcgcccagatgcaggcataaagtggattttgcttattttccaagctggatcagt 115  Q
    ||||||||| ||||  | |||||||||| | ||||||||| || | ||||| | ||||  |||||||||||||||||||| |||||||||||||||  ||    
T  32139185 ggacatcatcggttctttcctcaggcgctcctgcgtgtaattccatgcgcctatatgcgtgcataaagtggattttgcttgttttccaagctggatttgt 32139284  T
Q  116 gcataaagcctagttttcttctcttaaaccctaagtaaccatatgttattgatgataggtcatcttgagttattcttagtatgttcatcaatcattttca 215  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| |||| ||||||| |    
T  32139285 gcaaagagcctagttttcttctcttaaaccctaagtaaccatatgttattgatgacaggtcatcttacgttattcttagtatgtttatcagtcattttta 32139384  T
Q  216 gtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgtt 315  Q
    | |||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| | |||| ||    
T  32139385 gcaggttttacatctagaatagaggagtattagtaacattgcttatgatttcgggacatttgtaatgttttctatatttgtatcatgtaactctattctt 32139484  T
Q  316 cctg-aaacatagcaattctatgatgttttgatgtaatt 353  Q
    || | ||||||||||||| || |||||| ||||||||||    
T  32139485 cccgaaaacatagcaattataggatgttctgatgtaatt 32139523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 147 - 388
Target Start/End: Original strand, 32141373 - 32141614
Alignment:
Q  147 taagtaaccatatgttattgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtatt 246  Q
    |||||||| |||||||||| |||||||||||||||  ||||||||||||||||| ||   ||||||| ||||||||||||||| ||||||||||||||||    
T  32141373 taagtaactatatgttattcatgataggtcatcttacgttattcttagtatgtttattggtcatttttagtaggttttacatccaaaatagaggagtatt 32141472  T
Q  247 agaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttga 346  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||| ||||||||||    
T  32141473 ataaacattgcttatgatttcgagacatttgtaatgttttctatatttgagtcatgtaattcaattcttcctgaaacatagcaattctaagatgttttga 32141572  T
Q  347 tgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    || ||||||||||||||||||||||||||||||| |||||||    
T  32141573 tgaaattcacgaagaaatcatgcaaatcggcaaaacaagaca 32141614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 184 - 384
Target Start/End: Original strand, 29717376 - 29717574
Alignment:
Q  184 gttattcttagtatgttcatcaatcatttt-cagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatg 282  Q
    ||||||||||| |||||  ||||||||||| ||||||||||||||  || |||| |||||||||| |   ||||||||||||||||||| ||||||||||    
T  29717376 gttattcttagcatgtttttcaatcatttttcagtaggttttacaagaagaataaaggagtattatatcaattgcttatgatttcgggatatttgtaatg 29717475  T
Q  283 ttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagc 382  Q
    |||||||||||||||| |||||||  |||| |||| ||||||||||||||||| | | |||||||||||||||||||||||| |||||||||||||||||    
T  29717476 ttttctatatttgagt-atgtaat--tattcttcccgaaacatagcaattctaaggttttttgatgtaattcacgaagaaataatgcaaatcggcaaagc 29717572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 163 - 384
Target Start/End: Original strand, 16157082 - 16157303
Alignment:
Q  163 attgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatg 262  Q
    |||||||| ||||||||||   |||||||||| |||||  ||| |||||||||||||||||| |||| | | ||||||||||||||||  ||||||||||    
T  16157082 attgatgacaggtcatcttacattattcttagcatgtttttcagtcattttcagtaggtttttcatccacactagaggagtattagaacaattgcttatg 16157181  T
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaa 362  Q
    |||| ||||||||| ||||||||||||| |||||| ||| ||||  || | ||||||||||||||||||||||   ||| |||||||  |||||||||||    
T  16157182 attttgggacatttataatgttttctatttttgagccatataatgctacttttcctgaaacatagcaattctagagtgtgttgatgtgcttcacgaagaa 16157281  T
Q  363 atcatgcaaatcggcaaagcaa 384  Q
    |||||||||| ||| |||||||    
T  16157282 atcatgcaaaccggaaaagcaa 16157303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 388
Target Start/End: Complemental strand, 27421149 - 27420946
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    ||||||||||| || || |||| ||||||||| |||| ||||||   | |||| |||| |||||||   | |||||||||||||||||||||||||||||    
T  27421149 gttattcttagcatatttatcagtcattttcactaggatttacaagcagaataaaggaatattagatcaactgcttatgatttcgggacatttgtaatgt 27421050  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagca 383  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||||| || ||| ||||| |||||||||||| ||||||||| | ||||||||||||    
T  27421049 tttctatatttgagt-atgtaattatattcttcccgaaacatagcaattttaggatattttgttgtaattcacgatgaaatcatgtatatcggcaaagca 27420951  T
Q  384 agaca 388  Q
    |||||    
T  27420950 agaca 27420946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 208 - 388
Target Start/End: Original strand, 18970816 - 18970995
Alignment:
Q  208 cattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaatt 307  Q
    |||||||||||||||||||||| | |||||||||||||||||   |||||||| ||||| | ||||||||||||||||||||| ||||| || |||||||    
T  18970816 cattttcagtaggttttacatctagaatagaggagtattagagcaattgcttacgattttgcgacatttgtaatgttttctatttttgaatc-tgtaatt 18970914  T
Q  308 atattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
     |||| |||||||||||||| |||| || | |  ||||||||||||||||||||||||||||||  |||||||||||||||    
T  18970915 ttattcttcctgaaacatagtaattttagggtactttgatgtaattcacgaagaaatcatgcaatccggcaaagcaagaca 18970995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 207 - 394
Target Start/End: Complemental strand, 22627439 - 22627253
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||||||||||||||||    |||||| |||||||||||| | ||||  |||||||| ||| ||||||||||||||||| ||||||| || ||||||    
T  22627439 tcattttcagtaggttttaccagcaaaatataggagtattagagaaattgtctatgatttaggggcatttgtaatgttttctttatttgattc-tgtaat 22627341  T
Q  307 tatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagacacttgaa 394  Q
    | |||| |||||  |||||||||||| || ||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||    
T  22627340 tctattcttcctataacatagcaattttaggatgttttgttgtaattcacgaagaaatcatgcatatcggcaaagcaagacatttgaa 22627253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 207 - 388
Target Start/End: Original strand, 8501552 - 8501733
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||||||||| || |||||| | |||||| |||||||||||  |||||||||||||| |||||||||| ||||||||||||||| ||  ||||||||    
T  8501552 tcattttcagtagattatacatccagaatagatgagtattagaacaattgcttatgattttgggacatttgcaatgttttctatattcgaaacatgtaat 8501651  T
Q  307 tatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    | |||| |||  ||||||||  |||| || | |||||||||||||||||| || ||||||||||||||| ||||| ||||||    
T  8501652 tctatttttcaagaaacatataaattttagggtgttttgatgtaattcacaaataaatcatgcaaatcgacaaagaaagaca 8501733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 207 - 394
Target Start/End: Original strand, 26651679 - 26651864
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||||||||||||| |||   | |||||| ||||||||||   |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||    
T  26651679 tcattttcagtaggtttcacaagtagaatagatgagtattagagcaattgcttatgatttcgagacatttgtaatgttttctatatttaagt-atgtaat 26651777  T
Q  307 tatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagacacttgaa 394  Q
    | |||| |||  |||| ||||||||| || | ||||||| ||||||||| |||||||| ||||| ||||||||||||||||| |||||    
T  26651778 tctattcttctcgaaa-atagcaattttaaggtgttttgttgtaattcatgaagaaattatgcatatcggcaaagcaagacatttgaa 26651864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 165 - 386
Target Start/End: Original strand, 27907522 - 27907743
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    ||||||||||||| |||   |||||||||| |||||  ||| |||||||||||| |||||| || ||||||  ||| ||||||| ||  ||||| |||||    
T  27907522 tgatgataggtcaccttacattattcttagcatgtttttcagtcattttcagtaagttttagcaacaaaaag-gagaagtattaaaactattgcctatga 27907620  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaagaa 362  Q
    ||||||||| |||||||||||||||||||||||||  ||||||| || | |||| |||||||||||||| ||  | | |||||| |||||||||||||||    
T  27907621 tttcgggacttttgtaatgttttctatatttgagt-ttgtaattctagttttcccgaaacatagcaattttagggtttttttgaagtaattcacgaagaa 27907719  T
Q  363 atcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||||||||| |||||    
T  27907720 atcatgcaaatcggcaaatcaaga 27907743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 231 - 386
Target Start/End: Complemental strand, 25922635 - 25922481
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    ||||| ||||| || |||||  |||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| | | || ||||||||||||    
T  25922635 aaaatggaggattactagaacgattgcttatgatttcgggacttttataatgttttctatatttgagtc-tgtaattatagtttaccagaaacatagcaa 25922537  T
Q  331 ttctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    ||  | |  ||||||| ||||||||||||||||||||||||||||||||| |||||    
T  25922536 tttgagggggttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaaga 25922481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 207 - 380
Target Start/End: Complemental strand, 28930329 - 28930156
Alignment:
Q  207 tcattttcagtaggttttacat-caaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaa 305  Q
    |||||||||||| ||||||  | ||||||| ||||| ||||||||  ||||| |||||||||||||| |||||||||||||||||||||||||| | |||    
T  28930329 tcattttcagtatgttttagctgcaaaaat-gaggaatattagaacaattgcctatgatttcgggacttttgtaatgttttctatatttgagtc-tataa 28930232  T
Q  306 ttatattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    ||||| | || |||||||||||||||| ||  |  ||||||| |||||||||||||||||||||||||||||||||    
T  28930231 ttatagtttttctgaaacatagcaattttagaggggttttgaagtaattcacgaagaaatcatgcaaatcggcaaa 28930156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 165 - 380
Target Start/End: Complemental strand, 17891828 - 17891613
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| | ||||||||  ||||||||||  |||||  ||| ||||||||||||||||||||    |||| ||||||||||||||   ||| | ||||||    
T  17891828 tgatgacatgtcatcttacgttattcttaacatgtttttcagtcattttcagtaggttttaccagcaaaacagaggagtattagagtaatttcctatgat 17891729  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaa 363  Q
    ||||||||||||||||||||||||||||||||||  ||||||  | || ||||  |||||||||| || || | || |||||||||||||||||||||||    
T  17891728 ttcgggacatttgtaatgttttctatatttgagt-ttgtaatcctgttcttcccaaaacatagcagttttaaggtgcttttgatgtaattcacgaagaaa 17891630  T
Q  364 tcatgcaaatcggcaaa 380  Q
    || ||||||||| ||||    
T  17891629 tcctgcaaatcgacaaa 17891613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 386
Target Start/End: Complemental strand, 18758379 - 18758177
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttac-atcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatg 282  Q
    |||||| |||| |||||  | ||| |||||||||||||||||  | ||||||  ||||||||||||||  ||||| |||||||||||||| |||||||||    
T  18758379 gttatttttagcatgttttttaattattttcagtaggttttagtagcaaaaag-gaggagtattagaacgattgcctatgatttcgggacttttgtaatg 18758281  T
Q  283 ttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaag 381  Q
    ||||||||||||||||| ||||||| || | |||| |||||||||||||| ||  |  ||||||| |||||||||||||||| |||||||||||| |||     
T  18758280 ttttctatatttgagtc-tgtaattctagttttcccgaaacatagcaattttagaggggttttgaagtaattcacgaagaaaacatgcaaatcggaaaat 18758182  T
Q  382 caaga 386  Q
    |||||    
T  18758181 caaga 18758177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 209 - 386
Target Start/End: Complemental strand, 17351031 - 17350854
Alignment:
Q  209 attttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaatt 307  Q
    ||||||||||||||||| || ||||||| ||||||||||||||  ||||  ||||||||| |||| ||||||||||||||||||||||||||  ||||||    
T  17351031 attttcagtaggttttagcaacaaaaat-gaggagtattagaacaattgtctatgatttcaggacttttgtaatgttttctatatttgagtc-cgtaatt 17350934  T
Q  308 atattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
     || | |||| |||||||||||||| || |  | ||||||  |||||||||||||||||||||||||||||||| |||||    
T  17350933 ctagttttcccgaaacatagcaattttagggggtttttgaattaattcacgaagaaatcatgcaaatcggcaaatcaaga 17350854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 237 - 386
Target Start/End: Complemental strand, 25537581 - 25537432
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta- 335  Q
    |||||||||||||   ||||| ||||||||| |||| |||||||||||||||||||||||||| ||||||| || | |||| |||||||||||||| ||     
T  25537581 gaggagtattagagcgattgcctatgatttctggacttttgtaatgttttctatatttgagtc-tgtaattctagttttcccgaaacatagcaattttag 25537483  T
Q  336 tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
     |  ||||||| ||||||||||||||||||||||||||||||||| |||||    
T  25537482 gggggttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaaga 25537432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 237 - 386
Target Start/End: Complemental strand, 25532261 - 25532112
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    ||||||||||||||  ||||| |||||||||| ||  ||||||||||||||||||||| |||| ||||||| || | |||| |||||||||||||| ||     
T  25532261 gaggagtattagaacgattgcctatgatttcgtgaattttgtaatgttttctatatttcagtc-tgtaattctagttttcccgaaacatagcaattttag 25532163  T
Q  337 gatgtt-ttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    | |||| |||| | ||||||||||||||||||||||||||||||| |||||    
T  25532162 ggtgttcttgaagcaattcacgaagaaatcatgcaaatcggcaaatcaaga 25532112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 231 - 372
Target Start/End: Complemental strand, 18553320 - 18553179
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    |||| ||||||||||||||   ||||| ||| ||||||| ||||||| | ||||||||||||||||||| ||||||| |||| ||||| |||||||||||    
T  18553320 aaaacagaggagtattagatcaattgcctatcatttcggaacatttgaattgttttctatatttgagtc-tgtaattctattcttcctaaaacatagcaa 18553222  T
Q  331 ttctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaa 372  Q
    || |||| |||| || |||||||||| ||||||||||||||||    
T  18553221 ttttatggtgttcttaatgtaattcatgaagaaatcatgcaaa 18553179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 388
Target Start/End: Original strand, 23010052 - 23010267
Alignment:
Q  174 gtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttac-atcaaaaatagaggagtattagaaacattgcttatgatttcgggac 272  Q
    ||||||||  ||||||||||| |||||  ||| ||||||||| |||||||||| | |||||  | ||||||||||||   | ||| |  ||||| |||||    
T  23010052 gtcatcttacgttattcttagcatgtttttcagtcattttcaataggttttaccagcaaaacga-aggagtattagatcaactgcctccgattttgggac 23010150  T
Q  273 atttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgcaa 371  Q
    ||||||| ||||||||||||||||||| || |||| |||| ||||||||||||||||||| ||  ||||| ||||| |||||||| ||||||||| ||||    
T  23010151 atttgtattgttttctatatttgagtcttg-aattctattcttcctgaaacatagcaattttaatatgttattgatataattcacaaagaaatcaagcaa 23010249  T
Q  372 a-tcggcaaagcaagaca 388  Q
    | | ||||||||||||||    
T  23010250 attaggcaaagcaagaca 23010267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 165 - 386
Target Start/End: Original strand, 25886191 - 25886412
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| ||||||||||  |||||| |||  |||||  ||  ||||||||| ||||||||| ||| |||||  || |||||||||||  ||||  |||||    
T  25886191 tgatgacaggtcatcttacgttatttttatcatgtttttctgtcattttcattaggttttagcataaaaaag-gaagagtattagaacgattgtctatga 25886289  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaa 362  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| || | |||| |||||||||||||| || |  | |||| | ||||||||| |||||    
T  25886290 tttcgggacttttgtaatgttttctatatttgagtc-tgtaattctagttttcccgaaacatagcaattttagggggtttttaaagtaattcacaaagaa 25886388  T
Q  363 atcatgcaaatcggcaaagcaaga 386  Q
    ||||| |||||||| ||| |||||    
T  25886389 atcatacaaatcggaaaatcaaga 25886412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 209 - 386
Target Start/End: Complemental strand, 34574566 - 34574389
Alignment:
Q  209 attttcagtaggttttacatcaaaaatag-aggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaatt 307  Q
    ||||||||||||||||| ||  ||||||| |||||||||||||  | ||| |||||||| ||||| ||||||||||||| ||||||||||| ||||||||    
T  34574566 attttcagtaggtttta-atagaaaataggaggagtattagaacgaatgcctatgattttgggacttttgtaatgttttatatatttgagt-atgtaatt 34574469  T
Q  308 atattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
     || | |||| ||||| |||||||| ||  |  ||||||| ||||||||| |||||||||||||||||| |||| |||||    
T  34574468 ctagttttcccgaaacttagcaattttaggggggttttgaagtaattcacaaagaaatcatgcaaatcgacaaatcaaga 34574389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 237 - 386
Target Start/End: Original strand, 24086378 - 24086527
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta- 335  Q
    ||||||||||||||  ||||| |||||||||| ||| ||||||||| || |||||||||||||  |||||| || | |||  |||||||||||||| ||     
T  24086378 gaggagtattagaacgattgcctatgatttcgagacttttgtaatgcttactatatttgagtc-cgtaattctagttttctagaaacatagcaattttag 24086476  T
Q  336 tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
     |  ||||||| ||||||||||||||||||||||||||||||||| |||||    
T  24086477 gggggttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaaga 24086527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 207 - 380
Target Start/End: Original strand, 32438722 - 32438895
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacattt-gtaatgttttctatatttgagtcatgtaa 305  Q
    ||||||| |||  ||||| |||| | ||||||||||||||| ||  ||||  ||| ||||||||| |||| |||||||||||||| || |||||||||||    
T  32438722 tcattttaagttagtttttcatccagaatagaggagtattataacaattgtctataatttcgggatattttgtaatgttttctatgtt-gagtcatgtaa 32438820  T
Q  306 ttatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
     | || | |||| ||||||||||||||||| | |||||  ||||||||||||||||||||||| |||||| ||||    
T  32438821 ctctacttttcccgaaacatagcaattctagggtgtttaaatgtaattcacgaagaaatcatgtaaatcgacaaa 32438895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 238 - 386
Target Start/End: Original strand, 34579846 - 34579994
Alignment:
Q  238 aggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatg 337  Q
    |||||||||||||  ||||| ||||||||||||| |||| |||| |||| ||||||| | | |||||||| ||||  |||  | ||||||||||| || |    
T  34579846 aggagtattagaacaattgcctatgatttcgggatatttataattttttttatatttcatt-atgtaattctattagtcccaatacatagcaattttagg 34579944  T
Q  338 atgttttg-atgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
     ||||||  |||||||||||||||||||||||||||||||||||||||||    
T  34579945 gtgttttttatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 34579994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 238 - 386
Target Start/End: Original strand, 34585595 - 34585743
Alignment:
Q  238 aggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatg 337  Q
    |||||||||||||  ||||| ||||||||||||| |||| |||| |||| ||||||| | | |||||||| ||||  |||  | ||||||||||| || |    
T  34585595 aggagtattagaacaattgcctatgatttcgggatatttataattttttttatatttcatt-atgtaattctattagtcccaatacatagcaattttagg 34585693  T
Q  338 atgttttg-atgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
     ||||||  |||||||||||||||||||||||||||||||||||||||||    
T  34585694 gtgttttttatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 34585743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 231 - 386
Target Start/End: Complemental strand, 25196642 - 25196487
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    |||| |||| ||||||| ||  ||||| |||||||||||||| |||||||||||||||||||||||||| |||| || || | ||||  |||||||||||    
T  25196642 aaaaaagagaagtattaaaacgattgcctatgatttcgggacttttgtaatgttttctatatttgagtc-tgtatttctagttttcccaaaacatagcaa 25196544  T
Q  331 ttctatgatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    || || |  | |||||| |||||||||||| |||||| ||||||||||||| |||||    
T  25196543 ttttagggggattttgaagtaattcacgaaaaaatcaagcaaatcggcaaatcaaga 25196487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 167 - 379
Target Start/End: Complemental strand, 22569149 - 22568936
Alignment:
Q  167 atgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatt 265  Q
    |||| ||||||||||  ||||||||||  |||||  ||| ||| ||||||||||||||| ||  |||||| ||| ||||||||||  ||| | |||||||    
T  22569149 atgaaaggtcatcttatgttattcttaccatgtttttcagtcaatttcagtaggttttagcagaaaaaat-gagaagtattagaacgattacctatgatt 22569051  T
Q  266 tcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattct--atgatgttttgatgtaattcacgaagaaa 363  Q
    | || || |||||||||||||||||||||||||  ||||||| || | |||| |||||||||||||| |  | | | |||||| |||||||| |||||||    
T  22569050 ttggtacttttgtaatgttttctatatttgagt-ttgtaattctagttttcccgaaacatagcaattttagagggttttttgaagtaattcatgaagaaa 22568952  T
Q  364 tcatgcaaatcggcaa 379  Q
    || |||||||| ||||    
T  22568951 tcgtgcaaatctgcaa 22568936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 236 - 366
Target Start/End: Original strand, 11464389 - 11464518
Alignment:
Q  236 agaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta 335  Q
    ||||||||||||||  || ||| |||||||| ||||||||||||||||||||||||||||||| ||||| || |||| |||| |||||||||||||| ||    
T  11464389 agaggagtattagat-caatgcctatgatttagggacatttgtaatgttttctatatttgagt-atgtagttctattcttcccgaaacatagcaatttta 11464486  T
Q  336 tgatgtt-ttgatgtaattcacgaagaaatca 366  Q
     |  ||| |||| |||| ||||||||||||||    
T  11464487 gggggttattgaagtaaatcacgaagaaatca 11464518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 207 - 386
Target Start/End: Original strand, 27540307 - 27540486
Alignment:
Q  207 tcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaa 305  Q
    ||||||||||||||||||| ||| |||||| ||||| ||||||||  |||   ||||||||| |||| ||||||||||||| |||||||| ||| |||||    
T  27540307 tcattttcagtaggttttagcataaaaaat-gaggaatattagaacgattttctatgatttcaggacttttgtaatgttttgtatatttgggtc-tgtaa 27540404  T
Q  306 ttatattgttcctgaaacatagcaattctatgatg--ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    ||||| | |||| ||||||||| |||| || || |  |||||   |||||||||||||||||||||||||||| ||| |||||    
T  27540405 ttataattttcccgaaacatagaaatttta-gagggtttttgtattaattcacgaagaaatcatgcaaatcggtaaatcaaga 27540486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 32 - 155
Target Start/End: Original strand, 30999129 - 30999252
Alignment:
Q  32 tgcctcaggcgcccttgcgtgtaactctaggcgcccagatgcaggcataaagtggattttgcttattttccaagctggatcagtgcataaagcctagttt 131  Q
    |||||||||||||| |||||||| ||| ||||||||||||||||| | |||  |  ||||||||  |||||||  ||| || ||| ||||||||||||||    
T  30999129 tgcctcaggcgcccctgcgtgtagctccaggcgcccagatgcaggtaaaaacggatttttgcttgctttccaatatgggtcggtggataaagcctagttt 30999228  T
Q  132 tcttctcttaaaccctaagtaacc 155  Q
    |||||| | |||||||||||||||    
T  30999229 tcttctatgaaaccctaagtaacc 30999252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 45572444 - 45572586
Alignment:
Q  243 tattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt 342  Q
    ||||||||  ||||| |||||||| ||||||||| ||||||||| || ||||||| |||||| || |||| || || ||||||||||||| || ||||||    
T  45572444 tattagaacaattgcctatgatttggggacatttataatgttttttagatttgag-catgtagttctattctttcttaaacatagcaattttaggatgtt 45572542  T
Q  343 ttgatgt-aattcacgaagaaatcatgcaaatcggcaaagcaag 385  Q
    ||| ||| |||||||||||||||||| || || |||||| ||||    
T  45572543 ttgttgtaaattcacgaagaaatcatacatattggcaaaacaag 45572586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 45576111 - 45576253
Alignment:
Q  243 tattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt 342  Q
    ||||||||  ||||| |||||||| ||||||||| ||||||||| || ||||||| |||||| || |||| || || ||||||||||||| || ||||||    
T  45576111 tattagaacaattgcctatgatttggggacatttataatgttttttagatttgag-catgtagttctattctttcttaaacatagcaattttaggatgtt 45576209  T
Q  343 ttgatgt-aattcacgaagaaatcatgcaaatcggcaaagcaag 385  Q
    ||| ||| |||||||||||||||||| || || |||||| ||||    
T  45576210 ttgttgtaaattcacgaagaaatcatacatattggcaaaacaag 45576253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 45579778 - 45579920
Alignment:
Q  243 tattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt 342  Q
    ||||||||  ||||| |||||||| ||||||||| ||||||||| || ||||||| |||||| || |||| || || ||||||||||||| || ||||||    
T  45579778 tattagaacaattgcctatgatttggggacatttataatgttttttagatttgag-catgtagttctattctttcttaaacatagcaattttaggatgtt 45579876  T
Q  343 ttgatgt-aattcacgaagaaatcatgcaaatcggcaaagcaag 385  Q
    ||| ||| |||||||||||||||||| || || |||||| ||||    
T  45579877 ttgttgtaaattcacgaagaaatcatacatattggcaaaacaag 45579920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 45583445 - 45583587
Alignment:
Q  243 tattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt 342  Q
    ||||||||  ||||| |||||||| ||||||||| ||||||||| || ||||||| |||||| || |||| || || ||||||||||||| || ||||||    
T  45583445 tattagaacaattgcctatgatttggggacatttataatgttttttagatttgag-catgtagttctattctttcttaaacatagcaattttaggatgtt 45583543  T
Q  343 ttgatgt-aattcacgaagaaatcatgcaaatcggcaaagcaag 385  Q
    ||| ||| |||||||||||||||||| || || |||||| ||||    
T  45583544 ttgttgtaaattcacgaagaaatcatacatattggcaaaacaag 45583587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 45587112 - 45587254
Alignment:
Q  243 tattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt 342  Q
    ||||||||  ||||| |||||||| ||||||||| ||||||||| || ||||||| |||||| || |||| || || ||||||||||||| || ||||||    
T  45587112 tattagaacaattgcctatgatttggggacatttataatgttttttagatttgag-catgtagttctattctttcttaaacatagcaattttaggatgtt 45587210  T
Q  343 ttgatgt-aattcacgaagaaatcatgcaaatcggcaaagcaag 385  Q
    ||| ||| |||||||||||||||||| || || |||||| ||||    
T  45587211 ttgttgtaaattcacgaagaaatcatacatattggcaaaacaag 45587254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 45590779 - 45590921
Alignment:
Q  243 tattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt 342  Q
    ||||||||  ||||| |||||||| ||||||||| ||||||||| || ||||||| |||||| || |||| || || ||||||||||||| || ||||||    
T  45590779 tattagaacaattgcctatgatttggggacatttataatgttttttagatttgag-catgtagttctattctttcttaaacatagcaattttaggatgtt 45590877  T
Q  343 ttgatgt-aattcacgaagaaatcatgcaaatcggcaaagcaag 385  Q
    ||| ||| |||||||||||||||||| || || |||||| ||||    
T  45590878 ttgttgtaaattcacgaagaaatcatacatattggcaaaacaag 45590921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 45594446 - 45594588
Alignment:
Q  243 tattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt 342  Q
    ||||||||  ||||| |||||||| ||||||||| ||||||||| || ||||||| |||||| || |||| || || ||||||||||||| || ||||||    
T  45594446 tattagaacaattgcctatgatttggggacatttataatgttttttagatttgag-catgtagttctattctttcttaaacatagcaattttaggatgtt 45594544  T
Q  343 ttgatgt-aattcacgaagaaatcatgcaaatcggcaaagcaag 385  Q
    ||| ||| |||||||||||||||||| || || |||||| ||||    
T  45594545 ttgttgtaaattcacgaagaaatcatacatattggcaaaacaag 45594588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 45598113 - 45598255
Alignment:
Q  243 tattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt 342  Q
    ||||||||  ||||| |||||||| ||||||||| ||||||||| || ||||||| |||||| || |||| || || ||||||||||||| || ||||||    
T  45598113 tattagaacaattgcctatgatttggggacatttataatgttttttagatttgag-catgtagttctattctttcttaaacatagcaattttaggatgtt 45598211  T
Q  343 ttgatgt-aattcacgaagaaatcatgcaaatcggcaaagcaag 385  Q
    ||| ||| |||||||||||||||||| || || |||||| ||||    
T  45598212 ttgttgtaaattcacgaagaaatcatacatattggcaaaacaag 45598255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 45601780 - 45601922
Alignment:
Q  243 tattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt 342  Q
    ||||||||  ||||| |||||||| ||||||||| ||||||||| || ||||||| |||||| || |||| || || ||||||||||||| || ||||||    
T  45601780 tattagaacaattgcctatgatttggggacatttataatgttttttagatttgag-catgtagttctattctttcttaaacatagcaattttaggatgtt 45601878  T
Q  343 ttgatgt-aattcacgaagaaatcatgcaaatcggcaaagcaag 385  Q
    ||| ||| |||||||||||||||||| || || |||||| ||||    
T  45601879 ttgttgtaaattcacgaagaaatcatacatattggcaaaacaag 45601922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 45605447 - 45605589
Alignment:
Q  243 tattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt 342  Q
    ||||||||  ||||| |||||||| ||||||||| ||||||||| || ||||||| |||||| || |||| || || ||||||||||||| || ||||||    
T  45605447 tattagaacaattgcctatgatttggggacatttataatgttttttagatttgag-catgtagttctattctttcttaaacatagcaattttaggatgtt 45605545  T
Q  343 ttgatgt-aattcacgaagaaatcatgcaaatcggcaaagcaag 385  Q
    ||| ||| |||||||||||||||||| || || |||||| ||||    
T  45605546 ttgttgtaaattcacgaagaaatcatacatattggcaaaacaag 45605589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 45609114 - 45609256
Alignment:
Q  243 tattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt 342  Q
    ||||||||  ||||| |||||||| ||||||||| ||||||||| || ||||||| |||||| || |||| || || ||||||||||||| || ||||||    
T  45609114 tattagaacaattgcctatgatttggggacatttataatgttttttagatttgag-catgtagttctattctttcttaaacatagcaattttaggatgtt 45609212  T
Q  343 ttgatgt-aattcacgaagaaatcatgcaaatcggcaaagcaag 385  Q
    ||| ||| |||||||||||||||||| || || |||||| ||||    
T  45609213 ttgttgtaaattcacgaagaaatcatacatattggcaaaacaag 45609256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 45612781 - 45612923
Alignment:
Q  243 tattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt 342  Q
    ||||||||  ||||| |||||||| ||||||||| ||||||||| || ||||||| |||||| || |||| || || ||||||||||||| || ||||||    
T  45612781 tattagaacaattgcctatgatttggggacatttataatgttttttagatttgag-catgtagttctattctttcttaaacatagcaattttaggatgtt 45612879  T
Q  343 ttgatgt-aattcacgaagaaatcatgcaaatcggcaaagcaag 385  Q
    ||| ||| |||||||||||||||||| || || |||||| ||||    
T  45612880 ttgttgtaaattcacgaagaaatcatacatattggcaaaacaag 45612923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 385
Target Start/End: Original strand, 45616448 - 45616590
Alignment:
Q  243 tattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt 342  Q
    ||||||||  ||||| |||||||| ||||||||| ||||||||| || ||||||| |||||| || |||| || || ||||||||||||| || ||||||    
T  45616448 tattagaacaattgcctatgatttggggacatttataatgttttttagatttgag-catgtagttctattctttcttaaacatagcaattttaggatgtt 45616546  T
Q  343 ttgatgt-aattcacgaagaaatcatgcaaatcggcaaagcaag 385  Q
    ||| ||| |||||||||||||||||| || || |||||| ||||    
T  45616547 ttgttgtaaattcacgaagaaatcatacatattggcaaaacaag 45616590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 269 - 394
Target Start/End: Complemental strand, 34369320 - 34369195
Alignment:
Q  269 ggacatttgtaatgttttctatatttgagtcatgtaattatat-tgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcat 367  Q
    ||||||||||||||  || |||||| ||||||||||||| ||  | |||| |||||||||||||| |||| ||||||||| ||||||| || ||||||||    
T  34369320 ggacatttgtaatgaattttatatt-gagtcatgtaattctagcttttcccgaaacatagcaattttatggtgttttgatataattcaagatgaaatcat 34369222  T
Q  368 gcaaatcggcaaagcaagacacttgaa 394  Q
    ||||||||||||| ||| ||| |||||    
T  34369221 gcaaatcggcaaaacaaaacatttgaa 34369195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 373
Target Start/End: Complemental strand, 17199552 - 17199416
Alignment:
Q  236 agaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta 335  Q
    |||||||||||||||  ||||| || || ||| | || |||||||||||||||||||||||||| ||||||| || | ||||  |||||||||||||  |    
T  17199552 agaggagtattagaacgattgcatacgacttcagaacttttgtaatgttttctatatttgagtc-tgtaattctagttttcccaaaacatagcaatttga 17199454  T
Q  336 tgatgttttgatgtaattcacgaagaaatcatgcaaat 373  Q
     |  ||||||| |||||||| |||||||||||||||||    
T  17199453 gggggttttgaagtaattcatgaagaaatcatgcaaat 17199416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 278 - 386
Target Start/End: Complemental strand, 20853066 - 20852958
Alignment:
Q  278 taatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatga-tgttttgatgtaattcacgaagaaatcatgcaaatcgg 376  Q
    |||| ||||||||||||||||| |||||||||| | ||||||||||||||||||| || |  | |||||| |||||||| |||||||||||||||||||     
T  20853066 taatattttctatatttgagtc-tgtaattatagttttcctgaaacatagcaattttaagggttttttgaagtaattcaggaagaaatcatgcaaatcgt 20852968  T
Q  377 caaagcaaga 386  Q
    |||| |||||    
T  20852967 caaatcaaga 20852958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 238 - 332
Target Start/End: Complemental strand, 18545296 - 18545203
Alignment:
Q  238 aggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaatt 332  Q
    ||||||||||||   ||||| ||||||||||||||||||| | ||||||||||||||||||  ||||||| |||| |||| ||||||||||||||    
T  18545296 aggagtattagatcaattgcctatgatttcgggacatttgaattgttttctatatttgagt-ttgtaattctattcttcccgaaacatagcaatt 18545203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 384
Target Start/End: Complemental strand, 27871257 - 27871163
Alignment:
Q  291 atttgagtcatgtaattata-ttgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    ||||||||||||||||| || || || | |||||||| ||||||||   ||||||||||||||||| | ||||||||||||||||||||||||||    
T  27871257 atttgagtcatgtaattctaattttttccgaaacataacaattctagagtgttttgatgtaattcaaggagaaatcatgcaaatcggcaaagcaa 27871163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 386
Target Start/End: Original strand, 18120611 - 18120769
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttct---atatttgagtcatgtaattatattgttcctgaaacatag 327  Q
    ||||| ||||||||||||||  ||||| ||||||||||||||  | |||||||||| |   |||| |||||| ||||||| || | |||| ||||||||     
T  18120611 aaaatggaggagtattagaacgattgcctatgatttcgggactatagtaatgtttttttttatatatgagtc-tgtaattctaattttcccgaaacataa 18120709  T
Q  328 caattctatg-atgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |||||  | | || |||||| ||||||||||||||||||||||||||||| ||| |||||    
T  18120710 caatttcagggattttttgaagtaattcacgaagaaatcatgcaaatcggaaaatcaaga 18120769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 373
Target Start/End: Complemental strand, 20379311 - 20379175
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta- 335  Q
    ||||||||||||||  ||||  |||||||||||||| ||||||||||||||||||| | ||| |||||||| || | ||||  |||||||||||||  |     
T  20379311 gaggagtattagaacgattgtctatgatttcgggacttttgtaatgttttctatatctaagt-atgtaattctagttttcccaaaacatagcaatttgag 20379213  T
Q  336 tgatgttttgatgtaattcacgaagaaatcatgcaaat 373  Q
     |   |||||| ||||||||||||||||||||||||||    
T  20379212 gggctttttgaagtaattcacgaagaaatcatgcaaat 20379175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 386
Target Start/End: Complemental strand, 21905824 - 21905602
Alignment:
Q  164 ttgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatg 262  Q
    ||||||| ||||||||||  ||||||||||| |||||  ||| |||||||| ||| |||||| ||  |||||  ||||||||||||||  || |||||||    
T  21905824 ttgatgacaggtcatcttatgttattcttagcatgtttttcagtcattttctgtatgttttagcaggaaaaag-gaggagtattagaatgatagcttatg 21905726  T
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtttt---gatgtaattcacgaa 359  Q
    ||||  | ||  ||||||||||||  ||||||||||| ||||||| || | |||| | |||||||||||| || | | ||||   || |||||||| |||    
T  21905725 attttagaactcttgtaatgtttt--atatttgagtc-tgtaattctagttttcccggaacatagcaattttagggtttttttttgaagtaattcatgaa 21905629  T
Q  360 gaaatcatgcaaatcggcaaagcaaga 386  Q
    ||||||||||||||| ||||| |||||    
T  21905628 gaaatcatgcaaatcagcaaatcaaga 21905602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 386
Target Start/End: Complemental strand, 29144734 - 29144510
Alignment:
Q  163 attgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttat 261  Q
    |||||||| ||||||||||  ||||||||||| |||||  | | |||||  || ||||||||| ||   ||||  ||||| ||||||||  ||| | |||    
T  29144734 attgatgacaggtcatcttacgttattcttagcatgttttttagtcattaccaataggttttagcaagcaaaaaggaggaatattagaatgatttcctat 29144635  T
Q  262 gatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaag 360  Q
    ||||| ||||| |||||||||||||| ||||||||||| ||||||| || | || | |||||||| ||||| || |  | |||||| |||||||||| ||    
T  29144634 gattttgggacttttgtaatgttttcaatatttgagtc-tgtaattctagttttaccgaaacataacaattttagggggtttttgaagtaattcacggag 29144536  T
Q  361 aaatcatgcaaatcggcaaagcaaga 386  Q
    ||||||||||||| | |||| |||||    
T  29144535 aaatcatgcaaattgacaaatcaaga 29144510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 184 - 366
Target Start/End: Complemental strand, 28918266 - 28918084
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    ||||||||||| |||||  ||| |||||||||||||||||||  |  ||||  ||||||||||||||  ||||| |||||| |  | || ||||||||||    
T  28918266 gttattcttagcatgtttttcagtcattttcagtaggttttagctacaaaaaggaggagtattagaacaattgcctatgatattcgaacttttgtaatgt 28918167  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaagaaatca 366  Q
    ||||||||| |||||| ||||||| || | ||| ||||| ||| ||||| ||  | | ||||||  ||||||||||||||||||    
T  28918166 tttctatatatgagtc-tgtaattctagttttcttgaaatatatcaattttagaggttttttgaaataattcacgaagaaatca 28918084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 221 - 374
Target Start/End: Original strand, 30682258 - 30682411
Alignment:
Q  221 ttttacatcaaaaatagaggagtattagaaacattgcttatgattt-cgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcct- 318  Q
    |||| ||||||||||| || | ||||||||  |||||||||| ||| ||||||| | ||||||||||||||||| || ||||| || |||| | | ||      
T  30682258 tttttcatcaaaaataaagaattattagaacaattgcttatggttttcgggacagt-gtaatgttttctatatt-gaatcatgcaactatagtttccccc 30682355  T
Q  319 gaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatc 374  Q
    ||||||||||||||||| | |||| ||||||| |||| ||||||||||||||||||    
T  30682356 gaaacatagcaattctagggtgttatgatgtagttcaagaagaaatcatgcaaatc 30682411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 38796237 - 38796158
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgtttt 286  Q
    ||||||||| | |||||||| |||| |||||||||||||||||   |||| |||||||||||| ||||||||||||||||    
T  38796237 tcattttcaatgggttttacttcaagaatagaggagtattagatcaattgtttatgatttcggaacatttgtaatgtttt 38796158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 332
Target Start/End: Complemental strand, 29851040 - 29850947
Alignment:
Q  238 aggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaatt 332  Q
    ||||||||||||   ||| | |||||||| | ||||||||||||||||||||| ||||||| |||||||| |||| |||| ||||||||||||||    
T  29851040 aggagtattagatcaattccctatgattttgagacatttgtaatgttttctatctttgagt-atgtaattctattcttcccgaaacatagcaatt 29850947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 374
Target Start/End: Complemental strand, 32087071 - 32086936
Alignment:
Q  239 ggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatga 338  Q
    |||||||||||   ||||  |||||||| | ||||||||||||||||| |||||||| ||  ||||||| |||| |||| |||||||||||||| || |     
T  32087071 ggagtattagatcaattgtctatgattttgcgacatttgtaatgttttttatatttgggt-ttgtaattctattcttcccgaaacatagcaattttaggg 32086973  T
Q  339 tgtt-ttgatgtaattcacgaagaaatcatgcaaatc 374  Q
    |||| || | | ||||||||||||||||| |||||||    
T  32086972 tgttcttaaagcaattcacgaagaaatcaagcaaatc 32086936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 318 - 380
Target Start/End: Original strand, 16042813 - 16042875
Alignment:
Q  318 tgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    ||||||||||||||| || | |||||| |||||||||| ||||||||||||||||| ||||||    
T  16042813 tgaaacatagcaattttagggtgttttaatgtaattcaagaagaaatcatgcaaattggcaaa 16042875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 253 - 373
Target Start/End: Complemental strand, 19139651 - 19139533
Alignment:
Q  253 attgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaat 352  Q
    |||||||||||||| |||||||||||||||||||  |||||||||| |  ||||| |||| |||  |||||||||||||| || | | | |||| ||||     
T  19139651 attgcttatgattttgggacatttgtaatgttttaaatatttgagtta-ataattctattattctcgaaacatagcaattttaaggt-tcttgaagtaaa 19139554  T
Q  353 tcacgaagaaatcatgcaaat 373  Q
     ||||||||||||| ||||||    
T  19139553 acacgaagaaatcaagcaaat 19139533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 384
Target Start/End: Original strand, 8445649 - 8445692
Alignment:
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    ||||||||||||||| |||||||| |||||||||||||||||||    
T  8445649 ttttgatgtaattcaagaagaaattatgcaaatcggcaaagcaa 8445692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 15454212 - 15454145
Alignment:
Q  86 gattttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaa 153  Q
    ||||||| || ||||||||||||||| || | | ||||| |||||||| |||||||||||||||||||    
T  15454212 gattttgtttgttttccaagctggattagaggaaaaagcatagttttcatctcttaaaccctaagtaa 15454145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 384
Target Start/End: Original strand, 19198625 - 19198696
Alignment:
Q  314 ttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    |||| |||||||||||||| |  | |||| |||||| ||||||| |||||||||||||||||||||||||||    
T  19198625 ttcccgaaacatagcaatttttaggtgttcttgatgaaattcacaaagaaatcatgcaaatcggcaaagcaa 19198696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 19949219 - 19949153
Alignment:
Q  88 ttttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaac 154  Q
    |||||||| |||| ||||||||||| ||| |||||||||| ||||  |||||||| |||||||||||    
T  19949219 ttttgcttgtttttcaagctggatcggtggataaagcctaatttttatctcttaatccctaagtaac 19949153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 322
Target Start/End: Complemental strand, 26313255 - 26313119
Alignment:
Q  185 ttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    |||||||||| |||||  | ||||| ||||||||||||||| || |||||| | | |||||||||||  || || ||| |||| || || ||||||||||    
T  26313255 ttattcttagcatgttttttaatcaatttcagtaggttttagcagcaaaaaga-atgagtattagaacgatcgcctataattttggaacttttgtaatgt 26313157  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaa 322  Q
    ||| |||||||||||| ||||||| || | |||||||||    
T  26313156 tttttatatttgagtc-tgtaattctagttttcctgaaa 26313119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 287
Target Start/End: Original strand, 35680100 - 35680222
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| ||| ||||||  ||||||||||| |||||  | | ||||||||||||||||||||    |||| ||||||||||||||   ||||  ||||||    
T  35680100 tgatgacaggccatcttacgttattcttagcatgtttttaagtcattttcagtaggttttaccagcaaaacagaggagtattagagcaattgtctatgat 35680199  T
Q  265 ttcgggacatttgtaatgttttc 287  Q
    ||||| | ||||| |||||||||    
T  35680200 ttcggaaaatttggaatgttttc 35680222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 332
Target Start/End: Complemental strand, 29834856 - 29834796
Alignment:
Q  271 acatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaatt 332  Q
    ||||||||||||||||||||||||||||  ||||||| |||| |||| |||| |||||||||    
T  29834856 acatttgtaatgttttctatatttgagt-ttgtaattttattcttcccgaaagatagcaatt 29834796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 376
Target Start/End: Original strand, 17674166 - 17674201
Alignment:
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcgg 376  Q
    |||||| |||||||||||||||||||||||||||||    
T  17674166 ttttgaagtaattcacgaagaaatcatgcaaatcgg 17674201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 388
Target Start/End: Original strand, 32140694 - 32140733
Alignment:
Q  349 taattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    ||||||| |||||||||||||||||||||||| |||||||    
T  32140694 taattcatgaagaaatcatgcaaatcggcaaaacaagaca 32140733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 16257950 - 16257828
Alignment:
Q  172 aggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcggga 271  Q
    ||||||||||  ||||||||||  |||||  ||| || |||| ||||| ||||||    ||||  ||| ||||||||| | ||||  ||||||||||  |    
T  16257950 aggtcatcttatgttattcttaacatgtttttcagtcgtttttagtagattttaccagcaaaaccgagaagtattagagaaattgtctatgatttcgaaa 16257851  T
Q  272 catttgtaatgttttctatattt 294  Q
    |||||||||||||||||||||||    
T  16257850 catttgtaatgttttctatattt 16257828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 341 - 375
Target Start/End: Original strand, 17629090 - 17629124
Alignment:
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcg 375  Q
    |||||| ||||||||||||||||||||||||||||    
T  17629090 ttttgaagtaattcacgaagaaatcatgcaaatcg 17629124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 366
Target Start/End: Original strand, 25883455 - 25883555
Alignment:
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaa 363  Q
    |||| ||||||| || |||||| ||||||||||| ||||| |  |||| |||||||||| |||||||| || | |||| ||||||||||||| |||||||    
T  25883455 ttcgagacatttatattgtttt-tatatttgagt-atgtagtcctattcttcctgaaacgtagcaattttagggtgttcttgatgtaattcatgaagaaa 25883552  T
Q  364 tca 366  Q
    |||    
T  25883553 tca 25883555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 35708185 - 35708250
Alignment:
Q  88 ttttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaac 154  Q
    |||||||| |||| ||||||||||| | |||||| ||| | |||||||||||||| |||||||||||    
T  35708185 ttttgcttgtttttcaagctggatcggcgcataa-gcccaattttcttctcttaatccctaagtaac 35708250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 299
Target Start/End: Original strand, 18458435 - 18458499
Alignment:
Q  236 agaggagtattagaa-acattgcttatgatttcgggacatttgtaatgttttctatatttgagtc 299  Q
    ||||||||||||||| | || || ||||||||  ||||||||||||| |||| ||||||||||||    
T  18458435 agaggagtattagaagaaatcgcctatgattttaggacatttgtaatattttttatatttgagtc 18458499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 1e-63; HSPs: 72)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 165 - 388
Target Start/End: Complemental strand, 30356360 - 30356137
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| ||||||| ||| ||||||||||  |||||  | | ||||||||| ||||||||||||||| |||||||||||  ||||   ||||||||||||    
T  30356360 tgatgacaggtcattttgcgttattcttaacatgttttttagtcattttcattaggttttacatcaagaatagaggagtgatagagcaattgcttatgat 30356261  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaat 364  Q
    |||||||||||| ||||||||| ||||| |||||||||||||| |||| |||| |||||||| |||||||| ||||||||||||||||||||| ||||||    
T  30356260 ttcgggacatttataatgttttatatatatgagtcatgtaattctattattcccgaaacatatcaattctaggatgttttgatgtaattcacggagaaat 30356161  T
Q  365 catgcaaatcggcaaagcaagaca 388  Q
    ||||||||||||||||||||||||    
T  30356160 catgcaaatcggcaaagcaagaca 30356137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 174 - 388
Target Start/End: Complemental strand, 27961302 - 27961088
Alignment:
Q  174 gtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggaca 273  Q
    ||||||||  ||||||||||  |||||  ||||||||||||||||||||||  ||| ||||||||||||||||| ||| ||| |||||||||| |||||     
T  27961302 gtcatcttacgttattcttaacatgtttttcaatcattttcagtaggtttttaatccaaaatagaggagtattataaaaatttcttatgattttgggacg 27961203  T
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaat 373  Q
    |||| ||||| |||||||||||| ||||||||||  ||| |||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  27961202 tttgaaatgtattctatatttgattcatgtaattccattcttcccgaaacatagcaattctagggtgttttgatgtaattcacgaagaaatcatgcaaat 27961103  T
Q  374 cggcaaagcaagaca 388  Q
    |||||||| ||||||    
T  27961102 cggcaaagaaagaca 27961088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 207 - 388
Target Start/End: Complemental strand, 32760024 - 32759843
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    |||||||||||||||||| |||| ||||||||||| || ||||   |||||||||||||| | ||||| |||||||||||||| ||||||||||||||||    
T  32760024 tcattttcagtaggttttccatccaaaatagaggactactagagcaattgcttatgattttgagacatgtgtaatgttttctaaatttgagtcatgtaat 32759925  T
Q  307 tatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    | || | ||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  32759924 tctacttttcccaaaacatagcaattctaggatgttttgatgtaattcacgaagaaatcatgcaaatcggcaatgtaagaca 32759843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 165 - 382
Target Start/End: Original strand, 22564549 - 22564766
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    ||||| |||||||||||  ||||||||||| |||||  ||| ||||||| ||||||||||||    |||| ||||||||||||||   ||||| | ||||    
T  22564549 tgatgttaggtcatcttacgttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaacagaggagtattagagcaattgcctgtgat 22564648  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaa 363  Q
    ||||||||||||||||||||||||||||||||||| ||||||| | || |||  |||||||||||||| || | |||| |||||||||||||||||||||    
T  22564649 ttcgggacatttgtaatgttttctatatttgagtc-tgtaattctgttcttctcgaaacatagcaattttagggtgttgttgatgtaattcacgaagaaa 22564747  T
Q  364 tcatgcaaatcggcaaagc 382  Q
    |||||||||||| ||||||    
T  22564748 tcatgcaaatcgacaaagc 22564766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 203 - 388
Target Start/End: Original strand, 21079759 - 21079943
Alignment:
Q  203 tcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatg 302  Q
    |||| |||||| ||||||||||| | | |||||||||||||||||||   ||||| ||||||||  ||||||||| ||||||||||||||||||||| ||    
T  21079759 tcaaccatttttagtaggttttaaaaccaaaatagaggagtattagatcaattgcatatgatttttggacatttgcaatgttttctatatttgagtc-tg 21079857  T
Q  303 taattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    ||||| |||| || | || |||||| |||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21079858 taattctattatttccgatacatagaaattttatggtgttttgatgtaattcaagaagaaatcatgcaaatcggcaaagcaagaca 21079943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 166 - 381
Target Start/End: Original strand, 23644318 - 23644533
Alignment:
Q  166 gatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatt 265  Q
    ||||| |||| |||||  ||||||||||| |||||  |||||  |||| ||||||||||||    |||| | ||||||||||||   ||||| |||||||    
T  23644318 gatgacaggttatcttacgttattcttagcatgtttttcaattgtttttagtaggttttaccagcaaaacataggagtattagatcaattgcctatgatt 23644417  T
Q  266 tcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaat 364  Q
    |||||||||||||||||||||||||||||||||| |||| || | || ||||| ||||||||||| | || |||| ||||||||||||||||||||||||    
T  23644418 tcgggacatttgtaatgttttctatatttgagtc-tgtatttctgttcttcctaaaacatagcaaatttaggatgtttttgatgtaattcacgaagaaat 23644516  T
Q  365 catgcaaatcggcaaag 381  Q
    |||||||||| ||||||    
T  23644517 catgcaaatccgcaaag 23644533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 166 - 379
Target Start/End: Complemental strand, 24469894 - 24469681
Alignment:
Q  166 gatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttt-acatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    ||||| ||||||||||  |||||| ||||||||||  |||||||||||||||||||||| ||| ||||||  ||||||||||||||  ||||| ||||||    
T  24469894 gatgacaggtcatcttacgttatttttagtatgtttttcaatcattttcagtaggttttgacagcaaaaag-gaggagtattagaacgattgcctatgat 24469796  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaagaaa 363  Q
    |||||||| |||||||| |||||||||| |||||| |||||||||| | |||| |||||||| ||||| ||  ||  |||||| ||||||||||||||||    
T  24469795 ttcgggacttttgtaatattttctatatatgagtc-tgtaattatagttttcccgaaacataacaattttagggagtttttgaagtaattcacgaagaaa 24469697  T
Q  364 tcatgcaaatcggcaa 379  Q
    ||||| ||||| ||||    
T  24469696 tcatgaaaatcagcaa 24469681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 207 - 380
Target Start/End: Original strand, 9507312 - 9507485
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||||||||||||||||    | || || ||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  9507312 tcattttcagtaggttttaccagtagaacaggggagtattagaacaattgcttatgatttcgggacatttgtaatattttctatatttgagt-atgtaat 9507410  T
Q  307 tatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    | |||| |||| || ||||||||||| || | || |||||||||||||||||||||||||||  |||||||||||    
T  9507411 tctattattcccgagacatagcaattatagggtgtttttgatgtaattcacgaagaaatcataaaaatcggcaaa 9507485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 188 - 388
Target Start/End: Complemental strand, 3358216 - 3358017
Alignment:
Q  188 ttcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttc 287  Q
    ||||||| |||||  ||| ||||||||   || ||||||||| | |||||||||||||||||   |||| ||||||||  |||||||||| |||||||||    
T  3358216 ttcttagcatgtttttcagtcattttcgaaagattttacatccagaatagaggagtattagagtaattgtttatgattatgggacatttgaaatgttttc 3358117  T
Q  288 tatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagac 387  Q
    |||||||||||| ||||||||| || || | |||||||||||||  |||| |||||||| |||||||  ||||||||||||||||||||||||| |||||    
T  3358116 tatatttgagtc-tgtaattattttctttccgaaacatagcaatattatggtgttttgacgtaattcgtgaagaaatcatgcaaatcggcaaagaaagac 3358018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 167 - 367
Target Start/End: Original strand, 23087109 - 23087309
Alignment:
Q  167 atgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgattt 266  Q
    |||| ||||||||||   ||||||||||||||||  |||||||||||||| ||| ||| |||| | ||||  ||||||||||||| ||||||||||||||    
T  23087109 atgaaaggtcatcttacattattcttagtatgtttttcaatcattttcaggaggcttttcatccagaataatggagtattagaaaaattgcttatgattt 23087208  T
Q  267 cgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatca 366  Q
     || | |||| ||||||||||||||||| ||||||| |||| |||| |||| |||||||||| ||| || | ||||| ||| |||||||| |||||||||    
T  23087209 tggaaaatttataatgttttctatatttaagtcatgaaattttattcttcccgaaacatagctattttagggtgtttcgatataattcacaaagaaatca 23087308  T
Q  367 t 367  Q
    |    
T  23087309 t 23087309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 174 - 388
Target Start/End: Original strand, 9338987 - 9339200
Alignment:
Q  174 gtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggaca 273  Q
    ||||||||  || |||||||  |||||  ||| ||||||||| ||||| ||||||| | ||||    |||||||||   |||||||||||||| ||||||    
T  9338987 gtcatcttacgtcattcttaacatgtttttcagtcattttcaataggtattacatccagaatatctaagtattagagcaattgcttatgatttggggaca 9339086  T
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaat 373  Q
    |||||||||||||||||||||||||  ||||||| |||| || | |||||||||||||| || | | ||||||||||||||| ||||||||||| |||||    
T  9339087 tttgtaatgttttctatatttgagtt-tgtaattctattctttccgaaacatagcaattttagggtattttgatgtaattcatgaagaaatcattcaaat 9339185  T
Q  374 cggcaaagcaagaca 388  Q
    | |||||||||||||    
T  9339186 ctgcaaagcaagaca 9339200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 207 - 388
Target Start/End: Original strand, 21060446 - 21060626
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||||| ||||||||| | | |||||||||||||||||||   ||||| ||||||||  |||||||| |||||||||||||||||||||  | ||||    
T  21060446 tcattttcaataggttttaaaaccaaaatagaggagtattagatcaattgcatatgatttttggacatttttaatgttttctatatttgagt-ttataat 21060544  T
Q  307 tatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    | |||| || |||| ||||||||||| || | ||||||||||||||||| |||||||||||| |||| || |||||||||||    
T  21060545 tctattatttctgatacatagcaattttacggtgttttgatgtaattcaagaagaaatcatgtaaattgggaaagcaagaca 21060626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 264 - 388
Target Start/End: Complemental strand, 10822234 - 10822111
Alignment:
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaa 363  Q
    |||||||||||||||||||||||||||||||  || |||||||| || | ||| | |||||||||||||||| | ||||||||||||||| |||||||||    
T  10822234 tttcgggacatttgtaatgttttctatatttttgttatgtaattctaattttcttaaaacatagcaattctagggtgttttgatgtaatt-acgaagaaa 10822136  T
Q  364 tcatgcaaatcggcaaagcaagaca 388  Q
    |||||||||||||||||||||||||    
T  10822135 tcatgcaaatcggcaaagcaagaca 10822111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 231 - 374
Target Start/End: Original strand, 9897933 - 9898076
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    |||| |||||||| |||||   ||| ||||||||||||| ||||||||| ||||||||||||||||||| ||||||| |||| ||| |||||||||||||    
T  9897933 aaaacagaggagtgttagatcaattacttatgatttcggaacatttgtattgttttctatatttgagtc-tgtaattgtattcttcttgaaacatagcaa 9898031  T
Q  331 ttctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaatc 374  Q
    || || | |||| ||||||||||||||||||||||||| ||||||    
T  9898032 ttttagggtgttcttgatgtaattcacgaagaaatcatacaaatc 9898076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 204 - 384
Target Start/End: Complemental strand, 16175837 - 16175657
Alignment:
Q  204 caatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgt 303  Q
    ||||||||||||||  ||||| |||| | ||||||||||||||| |   ||||  |||||||||  || ||||||||  |||| ||||||||||||||||    
T  16175837 caatcattttcagttagtttttcatctagaatagaggagtattaaagcaattgtctatgatttcaagatatttgtaacattttttatatttgagtcatgt 16175738  T
Q  304 aattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    |||| || | | ||  |||||||| ||||||||| ||||||||||||||||||||||||||||||  || |||||||||||    
T  16175737 aattctactttccccaaaacatagtaattctatggtgttttgatgtaattcacgaagaaatcatggtaaccggcaaagcaa 16175657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 165 - 379
Target Start/End: Complemental strand, 24480121 - 24479907
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttt-acatcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||||||||||||||  ||||||||||| ||||   ||||||||||||||||||||||  || ||||||  |||||||||| |||  ||||  |||||    
T  24480121 tgatgataggtcatcttacgttattcttagcatgtatttcaatcattttcagtaggttttggcagcaaaaa-ggaggagtattggaacgattgtctatga 24480023  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaa 362  Q
    ||||||||  ||||||||||||||||||| |||||| |||||||||| | |||  |||||||| ||||| || |  | |||||| |||||||||||| ||    
T  24480022 tttcgggaattttgtaatgttttctatatgtgagtc-tgtaattatagttttctcgaaacataacaattttagggggtttttgaagtaattcacgaaaaa 24479924  T
Q  363 atcatgcaaatcggcaa 379  Q
    |||||||||||| ||||    
T  24479923 atcatgcaaatcagcaa 24479907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 240 - 386
Target Start/End: Complemental strand, 2588318 - 2588172
Alignment:
Q  240 gagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgat 339  Q
    |||||||||||  ||||  |||||||||| |||||||||||||||||||||||||||||| ||||||| |||| ||||  |||||| ||||||||  | |    
T  2588318 gagtattagaacaattgtctatgatttcgtgacatttgtaatgttttctatatttgagtc-tgtaattctattcttcccaaaacatggcaattcttgggt 2588220  T
Q  340 g-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    | ||||||||||||||||||||||||| ||  ||||||||||||||||    
T  2588219 gtttttgatgtaattcacgaagaaatcgtgataatcggcaaagcaaga 2588172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 237 - 386
Target Start/End: Complemental strand, 14723709 - 14723561
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    ||||||||||||||  ||||  |||||  ||||||| |||||||||||||||||||||||||| ||||||| || | || |||||||||||||||| ||     
T  14723709 gaggagtattagaatgattgtctatgacatcgggacttttgtaatgttttctatatttgagtc-tgtaattctagtttttctgaaacatagcaattttag 14723611  T
Q  337 gatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |   |||||| ||||||||||||||||||||||||||| ||||| |||||    
T  14723610 gggtttttgaagtaattcacgaagaaatcatgcaaatcagcaaatcaaga 14723561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 164 - 386
Target Start/End: Complemental strand, 14076494 - 14076272
Alignment:
Q  164 ttgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatg 262  Q
    ||||||| ||||||||||  ||||||||||| ||| |  ||| | |||||||||| | |||| || |||| |  ||||||||||||| | ||||| ||||    
T  14076494 ttgatgacaggtcatcttacgttattcttagcatggttttcagttattttcagtatgatttagcagcaaagag-gaggagtattagagaaattgcctatg 14076396  T
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatg-atgttttgatgtaattcacgaaga 361  Q
    ||||| |||| ||||||||||||||||||||||||||   ||||| |||| |||| |||||||||||||| || | |  |||||| ||||||||||||||    
T  14076395 atttcaggacttttgtaatgttttctatatttgagtc-cctaattctatttttcccgaaacatagcaattttaggtagtttttgaagtaattcacgaaga 14076297  T
Q  362 aatcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||| | |||| |||||    
T  14076296 aatcatgcaaattgacaaatcaaga 14076272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 237 - 386
Target Start/End: Original strand, 17822096 - 17822246
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    ||||||||||||||  ||||| |||||||| ||||| |||||||||||||||| |||||||| |||||||| || | |||| ||||||||||| || ||     
T  17822096 gaggagtattagaacgattgcctatgattttgggacttttgtaatgttttctaaatttgagt-atgtaattctagtcttcccgaaacatagcagttttaa 17822194  T
Q  337 gatg--ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
     | |  |||||| ||||||||||||||||||||||||||||||||| |||||    
T  17822195 tagggtttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaaga 17822246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 209 - 386
Target Start/End: Original strand, 19594020 - 19594198
Alignment:
Q  209 attttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcg-ggacatttgtaatgttttctatatttgagtcatgtaatt 307  Q
    |||||||||||||||||  |  ||||  ||||||||||||||  ||||| ||||||||   |||| |||||||||||||||||||||||||| |||||||    
T  19594020 attttcagtaggttttagctgcaaaaaggaggagtattagaacaattgcctatgattttacggacttttgtaatgttttctatatttgagtc-tgtaatt 19594118  T
Q  308 atattgttcctgaaacatagcaattctatg-atgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
     || | |||| |||||||| ||||| || | | ||||||| ||||||||||||||||||||||||||||| ||| |||||    
T  19594119 ctagttttcccgaaacataacaattttagggaggttttgaagtaattcacgaagaaatcatgcaaatcggaaaatcaaga 19594198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 164 - 386
Target Start/End: Original strand, 22404253 - 22404474
Alignment:
Q  164 ttgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatg 262  Q
    ||||||| | ||||||||  ||||||||||  |||||  ||| | | ||||||||||||||| || ||||||  ||||||||||| ||  ||||  ||||    
T  22404253 ttgatgacatgtcatctttcgttattcttatcatgtttttcagtaaatttcagtaggttttagcagcaaaaag-gaggagtattaaaacgattgtctatg 22404351  T
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaa 362  Q
    |||||||||| |||||||||||||||||||| |||| |||||||| |  | ||||||||||||| ||||| || |  ||||| | |||||||| ||||||    
T  22404352 atttcgggacttttgtaatgttttctatattcgagt-atgtaattctggttttcctgaaacataccaattttagggggtttttaagtaattcatgaagaa 22404450  T
Q  363 atcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||| ||||| |||||    
T  22404451 atcatgcaaatcagcaaatcaaga 22404474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 164 - 384
Target Start/End: Original strand, 8038049 - 8038269
Alignment:
Q  164 ttgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttac-atcaaaaatagaggagtattagaaacattgcttatg 262  Q
    ||||||| ||||||||||  |||||||||||  ||||  |||||| |||||| || ||| ||| | ||| ||  ||||||||||||| | | ||| ||||    
T  8038049 ttgatgacaggtcatcttacgttattcttagcctgtttttcaatctttttcactaagttataccagcaataag-gaggagtattagagaaactgcctatg 8038147  T
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaaga 361  Q
    |||||  ||||||| |||||||||||||||||||||| || |||| || | ||||  ||||||||||||| || | |||||| || |||||| |||||||    
T  8038148 atttcaagacatttataatgttttctatatttgagtc-tgcaattctagtcttcccaaaacatagcaattttagggtgtttttgaagtaatttacgaaga 8038246  T
Q  362 aatcatgcaaatcggcaaagcaa 384  Q
    |||||||||||||||||||||||    
T  8038247 aatcatgcaaatcggcaaagcaa 8038269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 209 - 386
Target Start/End: Original strand, 19577581 - 19577757
Alignment:
Q  209 attttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaatt 307  Q
    ||||||||||||||||| || ||||||  ||||||||||||||  ||||| ||||||||  |||| ||||||| |||||||||||||||||| |||||||    
T  19577581 attttcagtaggttttagcagcaaaaag-gaggagtattagaacgattgcctatgatttttggacttttgtaaggttttctatatttgagtc-tgtaatt 19577678  T
Q  308 atattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
     || | |||| || ||||| ||||| || |  | ||||| ||||||||| ||||||||||||||||||||||| |||||    
T  19577679 ctagttttcccgacacataacaattttagggaggtttgaagtaattcacaaagaaatcatgcaaatcggcaaatcaaga 19577757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 237 - 386
Target Start/End: Original strand, 18171325 - 18171473
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    ||||||||||||||  ||||| |||||||||||||| |||||||||||||||||||||||||| ||||||| || | |||| |||||| |||||||  |     
T  18171325 gaggagtattagaatgattgcctatgatttcgggacttttgtaatgttttctatatttgagtc-tgtaattgtagttttcccgaaacaaagcaatttgag 18171423  T
Q  337 gatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |  | ||| |  ||||||| |||||||||||||||||||||||| |||||    
T  18171424 gggggttttaattaattcatgaagaaatcatgcaaatcggcaaatcaaga 18171473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 235 - 386
Target Start/End: Original strand, 13216375 - 13216526
Alignment:
Q  235 tagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattct 334  Q
    ||||||||||||||||   |||||||| ||||||  |||||  ||||||||| |||||||| ||  ||||||| |||| |||||||||| ||||||||||    
T  13216375 tagaggagtattagaacatttgcttataatttcgaaacattgataatgttttttatatttgcgtt-tgtaattctattcttcctgaaacttagcaattct 13216473  T
Q  335 atgatgtttt-gatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    | | |||||| |||||||||| | ||||||||||||||||||||||| |||||    
T  13216474 agggtgtttttgatgtaattcgcaaagaaatcatgcaaatcggcaaaacaaga 13216526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 237 - 386
Target Start/End: Original strand, 23005318 - 23005467
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    |||||| |||||||  ||||| ||||||||||||||||||||||||||||| |||||||||| |||||||| || | ||||  ||||| |||||||  |     
T  23005318 gaggagcattagaacgattgcctatgatttcgggacatttgtaatgttttccatatttgagt-atgtaattctagttttcccaaaacaaagcaatttgag 23005416  T
Q  337 gatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |  | |||||| || |||||||||||||||||||||||||||||| |||||    
T  23005417 ggggattttgaagttattcacgaagaaatcatgcaaatcggcaaatcaaga 23005467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 238 - 386
Target Start/End: Complemental strand, 23783047 - 23782899
Alignment:
Q  238 aggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatg 337  Q
    ||||| |||||||  ||||| ||||||||||||||||||||||||||||| |||||||||| |||||||| || | ||||  ||||| |||||||  | |    
T  23783047 aggagcattagaacgattgcctatgatttcgggacatttgtaatgttttccatatttgagt-atgtaattctagttttcccaaaacaaagcaatttgagg 23782949  T
Q  338 atg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
      | |||||| || |||||||||||||||||||||||||||||| |||||    
T  23782948 gggattttgaagttattcacgaagaaatcatgcaaatcggcaaatcaaga 23782899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 237 - 386
Target Start/End: Complemental strand, 21932499 - 21932349
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa--ttct 334  Q
    ||||||||||||| | ||||  ||||||||  ||||||||||||||||||||||||||||||| ||||||| || | |||| ||||||||||||  |||     
T  21932499 gaggagtattagagaaattgtctatgattttaggacatttgtaatgttttctatatttgagtc-tgtaattctagtcttcccgaaacatagcaattttcg 21932401  T
Q  335 atgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
      |  ||||| | ||||||| |||||||||||||||||| ||||||||||||    
T  21932400 ggggagttttaaagtaattcgcgaagaaatcatgcaaattggcaaagcaaga 21932349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 20404167 - 20404229
Alignment:
Q  322 acatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20404167 acataacaattttatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 20404229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 386
Target Start/End: Original strand, 21760404 - 21760628
Alignment:
Q  162 tattgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgctta 260  Q
    ||||||||| |||||| ||| |||||||||||| || ||  ||| ||||||||| |||  |||| || ||||||  ||||| ||||||||  ||| | ||    
T  21760404 tattgatgacaggtcaccttaagttattcttagcatatttttcagtcattttcaatagaatttagcagcaaaaag-gaggattattagaatgatttccta 21760502  T
Q  261 tgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaa 359  Q
    ||||||||| |  ||| |||||||||||||||||||||  ||||||| || | |||  |||||||||||||| ||  |  ||||||| ||||||||||||    
T  21760503 tgatttcggtagttttataatgttttctatatttgagt-ttgtaattctagttttcgcgaaacatagcaattttaggggggttttgaagtaattcacgaa 21760601  T
Q  360 gaaatcatgcaaatcggcaaagcaaga 386  Q
    ||||||||||||||||| ||| |||||    
T  21760602 gaaatcatgcaaatcggtaaatcaaga 21760628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 207 - 332
Target Start/End: Complemental strand, 8246668 - 8246544
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||| ||||||||||||   ||||| | ||||||||||||   ||||  |||||||| ||||||||| || ||||||||||||||||||| ||||||    
T  8246668 tcatttttagtaggttttaccataaaaacataggagtattagatcaattgtctatgattttgggacatttttattgttttctatatttgagtc-tgtaat 8246570  T
Q  307 tatattgttcctgaaacatagcaatt 332  Q
    |||||| |||| ||||||||||||||    
T  8246569 tatattcttcccgaaacatagcaatt 8246544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 231 - 388
Target Start/End: Complemental strand, 20080767 - 20080611
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    |||| ||||||||||||||   ||||| |||||| | ||||||||| || ||| || |||||||||||| ||||||| |||| |||| ||||||||| ||    
T  20080767 aaaacagaggagtattagatcaattgcctatgatat-gggacatttatattgtattttatatttgagtc-tgtaattctattcttcccgaaacatagaaa 20080670  T
Q  331 ttctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    || || | | || |||||||||||||| ||||||||||| ||||||| |||||||||||    
T  20080669 ttttagggtcttcttgatgtaattcacaaagaaatcatgtaaatcggaaaagcaagaca 20080611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 375
Target Start/End: Complemental strand, 1636730 - 1636521
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| || |||||||  ||||||||||| |||||  ||| | ||||| ||||||||||| |  ||||||  |  |||||||||||  ||||| ||| |    
T  1636730 tgatgacagatcatcttacgttattcttagcatgtttttcagttatttttagtaggttttagcggcaaaaa--ggagagtattagaacaattgcctataa 1636633  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaa 362  Q
    ||| |||| ||||||||||||||| ||||||||||| | ||| | || | |||| |||||||||||||| || |  | |||||| |||||||||||||||    
T  1636632 ttttgggatatttgtaatgttttccatatttgagtc-tataactctagttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaagaa 1636534  T
Q  363 atcatgcaaatcg 375  Q
    |||||||||||||    
T  1636533 atcatgcaaatcg 1636521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 240 - 375
Target Start/End: Complemental strand, 8066674 - 8066539
Alignment:
Q  240 gagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tga 338  Q
    |||||||||||  ||||  ||||||||||| || |||||||| ||||||||||||||||| |||||||  | | |||||||||||||| |||| ||  |     
T  8066674 gagtattagaataattgtctatgatttcggaacttttgtaatattttctatatttgagtc-tgtaattcaagttttcctgaaacatagtaattttacggg 8066576  T
Q  339 tgttttgatgtaattcacgaagaaatcatgcaaatcg 375  Q
     ||||||| |||||||| |||||||||||||||||||    
T  8066575 ggttttgaagtaattcaagaagaaatcatgcaaatcg 8066539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 219 - 307
Target Start/End: Complemental strand, 10505189 - 10505101
Alignment:
Q  219 ggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaatt 307  Q
    |||||| |||| | ||| ||||||||||||||   |||||||||||||| |||||| |||||||||||||||| |||||||||||||||    
T  10505189 ggttttgcatccagaattgaggagtattagaatagttgcttatgatttcaggacatatgtaatgttttctataattgagtcatgtaatt 10505101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 388
Target Start/End: Complemental strand, 22569880 - 22569729
Alignment:
Q  236 agaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta 335  Q
    ||||||||||||||   ||| | |||||||||| ||||||| ||||||||||||||||||| | |||||||| |||| |||| |  ||||||||||| ||    
T  22569880 agaggagtattagatcaatttcctatgatttcgagacatttttaatgttttctatatttga-ttatgtaattctattcttcccg--acatagcaatttta 22569784  T
Q  336 tgatgtt-ttgatgtaattcacgaagaaatcatgcaaatc-ggcaaagcaagaca 388  Q
     ||||||  | | ||||||||||||||||||| ||||||| |||||| |||||||    
T  22569783 ggatgttccttaagtaattcacgaagaaatcaagcaaatcaggcaaaccaagaca 22569729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 231 - 388
Target Start/End: Original strand, 24389213 - 24389370
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    |||| ||||||||||||||   ||||| |||||||||||||||||| || |||||||||||||||| || | ||||| |||| |||   |||||||| ||    
T  24389213 aaaacagaggagtattagattaattgcctatgatttcgggacatttatattgttttctatatttgactc-tctaattctattcttctgaaaacatagaaa 24389311  T
Q  331 ttctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    || || | | || |||||||||||||  ||||||||||| ||||||  |||||||||||    
T  24389312 ttttagggtcttcttgatgtaattcataaagaaatcatgtaaatcgaaaaagcaagaca 24389370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 332
Target Start/End: Complemental strand, 14641729 - 14641563
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| |||| |||||  ||||||||||| |||||  ||| | ||||||||||||||||| || ||||||  ||||||||||||||  ||| | |||||    
T  14641729 tgatgacaggttatcttacgttattcttagcatgtttttcagttattttcagtaggttttagcagcaaaaag-gaggagtattagaacaattacctatga 14641631  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaatt 332  Q
    ||| || || |||||||||||||||||| ||||||| ||||||| |  | |||  ||||||||||||||    
T  14641630 ttttggaacttttgtaatgttttctataattgagtc-tgtaattctggttttctcgaaacatagcaatt 14641563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 211 - 370
Target Start/End: Original strand, 19721891 - 19722050
Alignment:
Q  211 tttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattata 310  Q
    |||||||||||||||||   | |||||||||||||||||   |||||||||||||| |||||| || ||||||||||| ||| | || | | ||| | ||    
T  19721891 tttcagtaggttttacaagcagaatagaggagtattagatcaattgcttatgattttgggacagttttaatgttttctttatctaag-cctttaactcta 19721989  T
Q  311 ttgttcctgaaacatagcaattctatgatgttttgatgt-aattcacgaagaaatcatgca 370  Q
    || | || |||||||||||| | || |||| |||| ||| |||||||||||||||||||||    
T  19721990 ttctgcccgaaacatagcaaatttaggatgatttgttgtaaattcacgaagaaatcatgca 19722050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 237 - 386
Target Start/End: Original strand, 21152563 - 21152713
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa--ttct 334  Q
    ||||||||||||||  ||||  ||||||||||| || ||||||||||||||||||||||| || |||||||  | | |||| ||||||||  ||  |||     
T  21152563 gaggagtattagaacgattgtctatgatttcggcacttttgtaatgttttctatatttgaatc-tgtaattccagttttcccgaaacatataaattttcg 21152661  T
Q  335 atgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
      | | |||||| ||||||| ||||||||||||||||||||||||| |||||    
T  21152662 gggtttttttgaagtaattctcgaagaaatcatgcaaatcggcaaatcaaga 21152713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 368
Target Start/End: Original strand, 21546841 - 21546972
Alignment:
Q  238 aggagtattagaaacattgcttat-gatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcct-gaaacatagcaattcta 335  Q
    ||||||||||||||  || ||||| | ||| |||||||||||||| ||||||||||   |||||||||||| || | ||||| |||||||||||||||||    
T  21546841 aggagtattagaaaattttcttattgtttttgggacatttgtaatattttctatatca-agtcatgtaattctagttttcctcgaaacatagcaattcta 21546939  T
Q  336 tgatgttttgatgtaattcacgaagaaatcatg 368  Q
     | ||||||  ||||||||| ||||||||||||    
T  21546940 gggtgttttagtgtaattcaagaagaaatcatg 21546972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 327
Target Start/End: Original strand, 22845870 - 22846012
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatg 282  Q
    |||| |||||| |||||  ||| | |||||||||| |||||| || ||||||  ||||||||||||||  ||||| ||| |||| ||||  |||||||||    
T  22845870 gttactcttagcatgtttttcagttattttcagtatgttttaacaacaaaaag-gaggagtattagaacaattgcctataattttgggagttttgtaatg 22845968  T
Q  283 ttttctatatttgagtcatgtaattatattgttcctgaaacatag 327  Q
    |||||||||||||||| ||||||||||| | ||| ||||||||||    
T  22845969 ttttctatatttgagt-atgtaattatagttttcttgaaacatag 22846012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 341 - 388
Target Start/End: Complemental strand, 10505092 - 10505045
Alignment:
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  10505092 ttttgatgtaattcacgaagaaatcatgcaaatcggcaaaacaagaca 10505045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 386
Target Start/End: Complemental strand, 9519757 - 9519608
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    |||||||||||||   ||||| |||||||| ||| | |||||||||| ||||||||||||||| ||||||| || | |||| |||| |  |||||| ||     
T  9519757 gaggagtattagagcaattgcctatgattttggggcttttgtaatgtgttctatatttgagtc-tgtaattctagttttcccgaaataacgcaattttag 9519659  T
Q  337 gatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    | || ||||||  ||||||||| |||||||||||||||| ||||| |||||    
T  9519658 ggtgtttttgaaataattcacggagaaatcatgcaaatcagcaaatcaaga 9519608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 384
Target Start/End: Complemental strand, 9841025 - 9840904
Alignment:
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgat-gtaattcacgaaga 361  Q
    ||||| ||| ||||||||| |||||||||||||| || | ||||| || | ||||  ||||||||||||| || | |||||| |  ||||||||||||||    
T  9841025 atttcaggatatttgtaatattttctatatttgactc-tataattctagtcttcccaaaacatagcaattttagggtgtttttaaagtaattcacgaaga 9840927  T
Q  362 aatcatgcaaatcggcaaagcaa 384  Q
    ||||| |||||||||||||||||    
T  9840926 aatcaagcaaatcggcaaagcaa 9840904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 386
Target Start/End: Original strand, 22411513 - 22411625
Alignment:
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaagaaatcatgcaaa 372  Q
    |||||||||||||| ||||||||||| | || || || | ||||  |||||||||||||  | || ||||| || |||||||||||||||||||||||||    
T  22411513 tttgtaatgttttccatatttgagtc-tctatttctagttttcccaaaacatagcaatttgaggaggtttttgaagtaattcacgaagaaatcatgcaaa 22411611  T
Q  373 tcggcaaagcaaga 386  Q
    |||||||| |||||    
T  22411612 tcggcaaatcaaga 22411625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 299
Target Start/End: Complemental strand, 19246307 - 19246239
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtc 299  Q
    |||||||| ||||||||||   |||||||||||||| |||||||||||| | |||||||||||||||||    
T  19246307 aaaatagatgagtattagatcaattgcttatgattttgggacatttgtattattttctatatttgagtc 19246239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 328
Target Start/End: Original strand, 31878953 - 31879016
Alignment:
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagc 328  Q
    |||||||||||||||||||||||||||||||||||  ||||||| |||| || ||||||||||||    
T  31878953 tttcgggacatttgtaatgttttctatatttgagt-ttgtaattctattctttctgaaacatagc 31879016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 9387590 - 9387512
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttat-gatttcgggacatttgtaatgttttctatatttgagtcatgtaattat 309  Q
    ||||||||||| ||||||||| |  | |||| | |||||||||||||||||||||||||||| |||||||||||||||||    
T  9387590 aaaatagaggattattagaaaaacggtttattgttttcgggacatttgtaatgttttctata-ttgagtcatgtaattat 9387512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 299
Target Start/End: Complemental strand, 11136943 - 11136881
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtc 299  Q
    ||||| ||||||||  ||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  11136943 gaggattattagaatgattgcatatgatttcgagacttttgtaatgttttctatatttgagtc 11136881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 299
Target Start/End: Complemental strand, 14078062 - 14078000
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtc 299  Q
    |||||||||||||   ||||| |||||||||||||| ||||||||||||| ||||||||||||    
T  14078062 gaggagtattagagcaattgcctatgatttcgggacttttgtaatgttttttatatttgagtc 14078000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 314 - 387
Target Start/End: Complemental strand, 15586041 - 15585967
Alignment:
Q  314 ttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaagaaatcatgcaaatcggcaaagcaagac 387  Q
    |||| |||||||||||||| || || ||||| || ||||||||| ||||||||||||||||||||||| ||||||    
T  15586041 ttcccgaaacatagcaattttaggaggtttttgaagtaattcacaaagaaatcatgcaaatcggcaaatcaagac 15585967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 272 - 394
Target Start/End: Complemental strand, 16167807 - 16167686
Alignment:
Q  272 catttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaa 371  Q
    ||||||||| |||||||||||||||||||||||||| || | ||||   ||||||| |||| || | ||||||||||||||||   |||||||||||  |    
T  16167807 catttgtaa-gttttctatatttgagtcatgtaattctaattttcccataacatagtaattatagggtgttttgatgtaattcttaaagaaatcatgtta 16167709  T
Q  372 atcggcaaagcaagacacttgaa 394  Q
    |  |||||||||| ||| |||||    
T  16167708 aggggcaaagcaaaacatttgaa 16167686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 388
Target Start/End: Original strand, 15600548 - 15600637
Alignment:
Q  301 tgtaattatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaagaaatcatgcaaatc-ggcaaagcaagaca 388  Q
    ||||||||| || ||||  | ||||||||||| || | |||||| |||||||||||||||||||| ||||||||| ||||||||||||||    
T  15600548 tgtaattattttcttcccaatacatagcaattttagggtgtttttgatgtaattcacgaagaaattatgcaaatcaggcaaagcaagaca 15600637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 386
Target Start/End: Complemental strand, 26820891 - 26820760
Alignment:
Q  253 attgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaat 352  Q
    ||||| ||||||||| |||| |||||||||||||||||||||| ||| || |||| || | ||| ||||||||| ||||| || ||  |||| |  ||||    
T  26820891 attgcctatgatttcaggacttttgtaatgttttctatatttgggtc-tgaaattctagttttcttgaaacataacaatttta-gaatttttaaaataat 26820794  T
Q  353 tcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    ||| | |||||||||||||||||| ||| |||||    
T  26820793 tcatgtagaaatcatgcaaatcggtaaatcaaga 26820760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 376
Target Start/End: Original strand, 34395423 - 34395573
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgattt-cgggacatttgtaatgttttctatatttgagtcatgtaattata---ttgttcctg---aaac 323  Q
    ||||||||||||||||||||  ||||| |||||||| | ||||||||||| ||||||||||  |||||||   ||||| ||   || |||||    || |    
T  34395423 aaaatagaggagtattagaacaattgcatatgattttcaggacatttgtattgttttctat--ttgagtcggataattctagtttttttccttccaaagc 34395520  T
Q  324 atagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcgg 376  Q
    ||| |||||||||| ||| || |||||||||| ||||||||||||||||||||    
T  34395521 ataacaattctatggtgtctttatgtaattcaagaagaaatcatgcaaatcgg 34395573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 278 - 380
Target Start/End: Original strand, 17295800 - 17295902
Alignment:
Q  278 taatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaatcgg 376  Q
    ||||||||| |||||| ||| | ||||||| |||| |||| ||||||||| ||||||| | || ||||| ||||  ||||||||||||||||||||| ||    
T  17295800 taatgttttttatattagagcc-tgtaattctattcttcccgaaacatagaaattctagggtggttttgttgtaggtcacgaagaaatcatgcaaattgg 17295898  T
Q  377 caaa 380  Q
    ||||    
T  17295899 caaa 17295902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 311
Target Start/End: Complemental strand, 14727231 - 14727087
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| ||||||||||  |||||| |||  |||||  ||| ||||||| |||||||||||  |  | || | |||||||||||||  ||| ||||| ||    
T  14727231 tgatgacaggtcatcttacgttattattaccatgtttttcagtcatttttagtaggttttatctgcagaacataggagtattagaataatttcttat-at 14727133  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatat 311  Q
    || || |||||| || ||||||||||||||||||| |||||||||||    
T  14727132 tttggaacatttatattgttttctatatttgagtc-tgtaattatat 14727087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 299
Target Start/End: Complemental strand, 17847884 - 17847743
Alignment:
Q  158 atgttattgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattg 256  Q
    ||||||||||||| || || ||||  ||||||||||| |||||  | | | ||||| |||| |||||| || ||||||| || |||||||||||  ||||    
T  17847884 atgttattgatgacagatcctcttatgttattcttagcatgttttttagttattttaagtaagttttagcagcaaaaat-gaagagtattagaacgattg 17847786  T
Q  257 cttatgatttcgggacatttgtaatgttttctatatttgagtc 299  Q
      |||||||| |||| |||||||||||| |||||||| |||||    
T  17847785 tctatgattttgggatatttgtaatgttctctatattagagtc 17847743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 385
Target Start/End: Original strand, 21687125 - 21687349
Alignment:
Q  161 ttattgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgctta 260  Q
    |||||||||| | ||||||||  ||||||||||| |||||  ||| ||| ||| ||||||||||||    |||| ||| ||||| ||||   ||||   |    
T  21687125 ttattgatgacatgtcatcttacgttattcttagcatgtttttcagtcaattttagtaggttttaccagcaaaacagaagagtaatagatcaattgtcga 21687224  T
Q  261 tgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaa 359  Q
     ||||| |||||||||||| |||||||||||| ||||| ||| |||| |||| |||  |||| |||| |||| || | |||| ||||| ||||| |||||    
T  21687225 ggattttgggacatttgtattgttttctatatatgagt-atgcaattctattcttctagaaatatagaaattttagggtgttcttgatctaatt-acgaa 21687322  T
Q  360 gaaatcatgcaaatc-ggcaaagcaag 385  Q
    ||||||| ||||| | |||||||||||    
T  21687323 gaaatcaagcaaaacaggcaaagcaag 21687349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 386
Target Start/End: Original strand, 20004356 - 20004401
Alignment:
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |||||| | ||||||||||||||||||||||||||||||| |||||    
T  20004356 ttttgaagaaattcacgaagaaatcatgcaaatcggcaaatcaaga 20004401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 13723912 - 13723853
Alignment:
Q  100 tccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaaccatatg 160  Q
    |||||| |||||||||| | |||||| ||||||||||||||||||||||| ||| ||||||    
T  13723912 tccaagttggatcagtgga-aaagcccagttttcttctcttaaaccctaattaatcatatg 13723853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 384
Target Start/End: Complemental strand, 9848084 - 9848041
Alignment:
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    |||||| |||||||||||| |||||||||| |||||||||||||    
T  9848084 ttttgaagtaattcacgaaaaaatcatgcatatcggcaaagcaa 9848041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 388
Target Start/End: Complemental strand, 14727048 - 14727001
Alignment:
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    |||||||||||||||||||||| ||||| |||| |||||| |||||||    
T  14727048 ttttgatgtaattcacgaagaattcatgaaaattggcaaatcaagaca 14727001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 386
Target Start/End: Complemental strand, 17383700 - 17383634
Alignment:
Q  320 aaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    ||||||||||||| || |  ||||||| ||||||| |||||||||||||||||| || ||| |||||    
T  17383700 aaacatagcaattttagggggttttgaagtaattcgcgaagaaatcatgcaaattggaaaatcaaga 17383634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 388
Target Start/End: Original strand, 24388042 - 24388198
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    |||| ||||||||||||||   ||| | |||||||||||||||||| | ||||||||||||||||| || | ||||| |||| || | ||||||||  ||    
T  24388042 aaaacagaggagtattagatcaatttcctatgatttcgggacatttat-atgttttctatatttgactc-tctaattctattctttcggaaacatataaa 24388139  T
Q  331 ttctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    || ||   | || |||||| ||||||| |||||||| || ||||| | |||||||||||    
T  24388140 ttttagagtcttcttgatgcaattcacaaagaaatcgtgtaaatcagaaaagcaagaca 24388198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 6629073 - 6629125
Alignment:
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcc 317  Q
    |||| ||| ||||||||||||||||||||||||||| ||||||| |||| ||||    
T  6629073 tttcaggatatttgtaatgttttctatatttgagtc-tgtaattctattcttcc 6629125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 386
Target Start/End: Complemental strand, 14639211 - 14639166
Alignment:
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |||||| ||||||||  ||||||||||||||||||||||| |||||    
T  14639211 ttttgaagtaattcaataagaaatcatgcaaatcggcaaatcaaga 14639166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 382
Target Start/End: Complemental strand, 20723573 - 20723481
Alignment:
Q  292 tttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg--ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagc 382  Q
    |||||||||||||||| || | ||||| ||||  |||| || || | ||  ||||||||||||||| ||  ||||||||||||||||||||||    
T  20723573 tttgagtcatgtaattctagttttcctaaaaccaagcacttttaaggtgttttttgatgtaattcaagataaaatcatgcaaatcggcaaagc 20723481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 298
Target Start/End: Original strand, 21845817 - 21845862
Alignment:
Q  253 attgcttatgatttcgggacatttgtaatgttttctatatttgagt 298  Q
    ||||| |||||||||||||  || ||||||||||||||||||||||    
T  21845817 attgcctatgatttcgggattttcgtaatgttttctatatttgagt 21845862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 22262785 - 22262849
Alignment:
Q  89 tttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaa 153  Q
    ||||||| ||||||||| |||||  ||| | || ||||||||||||| | |||||||||||||||    
T  22262785 tttgcttgttttccaagttggattggtggaaaaggcctagttttctttttttaaaccctaagtaa 22262849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 1e-60; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 174 - 388
Target Start/End: Original strand, 14235293 - 14235507
Alignment:
Q  174 gtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggaca 273  Q
    ||||||||  |||| |||||| |||||  ||| ||||||| |||||||||| |||| | ||| | |||||||||||   |||||||||||||| ||||||    
T  14235293 gtcatcttacgttactcttagcatgtttttcagtcatttttagtaggtttttcatccagaatggtggagtattagaccaattgcttatgattttgggaca 14235392  T
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaat 373  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| || | |||||||||||||||||||||||||||||||||||    
T  14235393 tttgtaatgttttctatatttgagtcatgtaattatattattcccgaaacatagcaattttagggtgttttgatgtaattcacgaagaaatcatgcaaat 14235492  T
Q  374 cggcaaagcaagaca 388  Q
     |||||| |||||||    
T  14235493 tggcaaaacaagaca 14235507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 165 - 386
Target Start/End: Original strand, 27116223 - 27116443
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| | ||||||||  ||| ||||||  |||||  ||||||||||| ||||||||||||   |||||  || |||||||||| | ||||  ||||||    
T  27116223 tgatgaaatgtcatcttacgtttttcttaacatgtttttcaatcatttttagtaggttttaccataaaaacggatgagtattagagaaattgtctatgat 27116322  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaat 364  Q
    || ||||||||||||||||||||||||||| ||| |||||||| |||| |||| ||||||||||||||||| | | |||| ||||||||||| |||||||    
T  27116323 tttgggacatttgtaatgttttctatattttagt-atgtaattctattcttcccgaaacatagcaattctagggtttttttatgtaattcacaaagaaat 27116421  T
Q  365 catgcaaatcggcaaagcaaga 386  Q
    ||||||||||||||||| ||||    
T  27116422 catgcaaatcggcaaagtaaga 27116443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 233 - 394
Target Start/End: Complemental strand, 26652605 - 26652446
Alignment:
Q  233 aatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaatt 332  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||||||||||||||||| |||| ||||   || |||| ||||    
T  26652605 aatagaggagtattagaaaaattgcttatgattttgggacatttgtaacgttttatatatttgagtcatgtaattctatttttcc--caaaatagaaatt 26652508  T
Q  333 ctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagacacttgaa 394  Q
     || | ||||||||||||||| ||||||||||||||||||| | ||||| |||||| |||||    
T  26652507 ataaggtgttttgatgtaatttacgaagaaatcatgcaaattgacaaagtaagacatttgaa 26652446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 165 - 386
Target Start/End: Complemental strand, 21450864 - 21450643
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| |||||||||| ||||||  |||| |||||  ||| ||||||||||||||||||| || ||||||  |||||||||| |||| ||||| |||||    
T  21450864 tgatgacaggtcatcttaagttatctttagcatgtttctcagtcattttcagtaggttttagcagcaaaaag-gaggagtattggaaagattgcctatga 21450766  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaagaa 362  Q
    ||||||||  |||||||||||||||||||||||||  ||||||| || | || | |||||||||||||| ||  |  ||||||| |||||||||||||||    
T  21450765 tttcgggaactttgtaatgttttctatatttgagt-ttgtaattctaattttaccgaaacatagcaattttaggggggttttgaagtaattcacgaagaa 21450667  T
Q  363 atcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||| ||||| |||||    
T  21450666 atcatgcaaatcagcaaatcaaga 21450643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 163 - 386
Target Start/End: Original strand, 21663088 - 21663312
Alignment:
Q  163 attgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttt-acatcaaaaatagaggagtattagaaacattgcttat 261  Q
    |||||||| ||||||||||  ||||||||||| |||||  ||| |||||||||||||||||| ||||||||||  ||| ||||||||||  ||||| |||    
T  21663088 attgatgacaggtcatcttacgttattcttagcatgtttttcagtcattttcagtaggttttaacatcaaaaa-ggagaagtattagaacgattgcctat 21663186  T
Q  262 gatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg--ttttgatgtaattcacgaa 359  Q
    ||||||||||| || |||||||| |||||||||||||| ||||||| || | ||||| ||||||||||||| || |  |  |||||| |  |||||||||    
T  21663187 gatttcgggactttagtaatgttctctatatttgagtc-tgtaattttagttttcctaaaacatagcaattttaggggggtttttgaagcgattcacgaa 21663285  T
Q  360 gaaatcatgcaaatcggcaaagcaaga 386  Q
    ||||||||| ||||||||||| |||||    
T  21663286 gaaatcatgtaaatcggcaaatcaaga 21663312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 253 - 386
Target Start/End: Complemental strand, 26022404 - 26022271
Alignment:
Q  253 attgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaa 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| || | ||||||||||||||||||| || || | |||||| ||||    
T  26022404 attgcttatgatttcgggacatttgtaatgttttctatatttgagtc-tttaattctagtcttcctgaaacatagcaattttaagaggtttttgaagtaa 26022306  T
Q  352 ttcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |||||| |||||||||||||||||||||| |||||    
T  26022305 ttcacggagaaatcatgcaaatcggcaaatcaaga 26022271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 163 - 386
Target Start/End: Complemental strand, 22621892 - 22621668
Alignment:
Q  163 attgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatg 262  Q
    |||||||| |||| |||||  || |||||||| |||||  ||| ||||||| |||||||||  || |||| | ||||||| ||||||   ||||| ||||    
T  22621892 attgatgacaggttatcttacgtaattcttagcatgtttttcagtcatttttagtaggtttaccagcaaaga-agaggagaattagatcaattgcctatg 22621794  T
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgt---tttgatgtaattcacgaa 359  Q
    ||||| ||| |||||||||||||||| |||| |||||  ||||||| ||| |||| |||||||| |||||||| |||||   ||||||||||||||||||    
T  22621793 atttcaggaaatttgtaatgttttctttattcgagtcg-gtaattacattcttcccgaaacataccaattctaggatgtgtttttgatgtaattcacgaa 22621695  T
Q  360 gaaatcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||||| ||||||||||||    
T  22621694 gaaatcatgcaaattggcaaagcaaga 22621668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 210 - 388
Target Start/End: Original strand, 15526841 - 15527019
Alignment:
Q  210 ttttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattat 309  Q
    |||||||||| ||||||    |||| || |||||||||||   ||||| |||||||||| ||||||||||||||||||||||||| |||| ||||||||     
T  15526841 ttttcagtagattttaccagcaaaacaggggagtattagagtaattgcctatgatttcgagacatttgtaatgttttctatattttagtc-tgtaattag 15526939  T
Q  310 attgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    | | ||||||||||||||||||| || |||||| ||| |||||||||| |||||||||||||||| ||||||| ||||||    
T  15526940 agttttcctgaaacatagcaattttaggatgttcttgttgtaattcacaaagaaatcatgcaaattggcaaagtaagaca 15527019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 165 - 386
Target Start/End: Original strand, 15542308 - 15542529
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| | ||||||||  ||||||||||  |||||  ||| ||||||||||||||||||| || ||||||   |||||||||||||  ||||| |||||    
T  15542308 tgatgacatgtcatcttacgttattcttaacatgtttttcagtcattttcagtaggttttagcagcaaaaagt-aggagtattagaacgattgcctatga 15542406  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaa 362  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||| || | || | |||||||||||||| || |  | |||||| |||||||||||||||    
T  15542407 tttcgggacttttgtaatgttttctatatctgagt-atgtaattctagtttttccgaaacatagcaattttaaggggtttttgaagtaattcacgaagaa 15542505  T
Q  363 atcatgcaaatcggcaaagcaaga 386  Q
    |||| ||||||||||||| |||||    
T  15542506 atcacgcaaatcggcaaatcaaga 15542529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 237 - 394
Target Start/End: Complemental strand, 26581599 - 26581441
Alignment:
Q  237 gaggagtattagaaacattgcttatgattt-cgggacatttgtaatgttttctatatttgagtcatgtaattata-ttgttcctgaaacatagcaattct 334  Q
    ||||||||||||||  ||||| |||| ||| ||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||| |    
T  26581599 gaggagtattagaattattgcctatggttttcgggacatttgtaatgttttctatatt-gagtcatgtaattatagttcttcctgaaacatagcaatttt 26581501  T
Q  335 atgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagacacttgaa 394  Q
    | | ||||||||||||||  | ||||||||||| ||||||||| |||||| ||| |||||    
T  26581500 agggtgttttgatgtaatcaaagaagaaatcatccaaatcggctaagcaaaacatttgaa 26581441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 237 - 386
Target Start/End: Original strand, 22426587 - 22426736
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta- 335  Q
    ||||||||||||||  ||||| |||||||||||||| |||||||||||||||||||||||||| ||||||| || | ||||||||||||||||||| ||     
T  22426587 gaggagtattagaacgattgcctatgatttcgggacttttgtaatgttttctatatttgagtc-tgtaattctagtcttcctgaaacatagcaattttag 22426685  T
Q  336 tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
     | | ||||||  |||||||||||||||||||||||||||| ||| |||||    
T  22426686 gggttttttgaaataattcacgaagaaatcatgcaaatcggaaaatcaaga 22426736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 165 - 386
Target Start/End: Original strand, 18527496 - 18527717
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| | ||||||||  ||||||||||| || ||  ||| ||||||||| ||||||||| |  ||||||  ||||||||||||||  ||||| |||||    
T  18527496 tgatgacaagtcatcttacgttattcttagcatctttttcactcattttcaataggttttagcggcaaaaag-gaggagtattagaatgattgcctatga 18527594  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaa 362  Q
    ||||||||  |||||||| ||||||||||||||||| ||||||| || | |||| |||||||||||||| || |  | |||||| |||||||||||||||    
T  18527595 tttcgggagttttgtaatcttttctatatttgagtc-tgtaattctagttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaagaa 18527693  T
Q  363 atcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||||| ||| |||||    
T  18527694 atcatgcaaatcggtaaatcaaga 18527717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 165 - 386
Target Start/End: Original strand, 25402435 - 25402656
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| ||||||||||| ||||||||||| |||||  ||| |   ||| |||||| |||| || |||||| |||||||||||||||  |||| ||||||    
T  25402435 tgatgacaggtcatcttgcgttattcttagcatgtttttcagtttattttagtaggatttagcagcaaaaa-agaggagtattagaacgattgtttatga 25402533  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaagaa 362  Q
    |||| |||| |||||||||||||||||||||||||| | ||||| || | ||||||||| ||||||||| ||  |  ||||||| |||||||||||||||    
T  25402534 tttcaggacttttgtaatgttttctatatttgagtc-tctaattctagttttcctgaaatatagcaattttaggggggttttgaagtaattcacgaagaa 25402632  T
Q  363 atcatgcaaatcggcaaagcaaga 386  Q
    |||| |||||| |||||| |||||    
T  25402633 atcaagcaaattggcaaatcaaga 25402656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 184 - 386
Target Start/End: Complemental strand, 17445144 - 17444944
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    ||||||||||  |||||  ||| | ||||| |||||||||||||   | |||||| ||| ||||||   |||||||||||||| |||| ||||||| |||    
T  17445144 gttattcttaacatgtttttcagttatttttagtaggttttacaagcataatagatgagcattagatcaattgcttatgattttgggatatttgtattgt 17445045  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagca 383  Q
    ||| |||||||||||| ||||||| |||| ||||||| | ||||||||| || ||||||||| ||||||||||||||||| |||||| |||||||||| |    
T  17445044 tttttatatttgagtc-tgtaattctattcttcctgagaaatagcaattttaggatgttttgttgtaattcacgaagaaa-catgcatatcggcaaagta 17444947  T
Q  384 aga 386  Q
    |||    
T  17444946 aga 17444944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 172 - 388
Target Start/End: Original strand, 22626161 - 22626377
Alignment:
Q  172 aggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcggga 271  Q
    ||||||||||  ||||||||||| |||||  | |||  |||| ||||| ||||||    |||| |||||||||||||| |  || | |||||||| ||||    
T  22626161 aggtcatcttacgttattcttagcatgtttttgaattttttttagtagcttttaccagcaaaacagaggagtattagagaatttacctatgattttggga 22626260  T
Q  272 catttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgca 370  Q
     ||||||||||||||||||||||||||| |||||| | | | |||||||||||| |||||| || | |||| ||||||||||||||||| | ||||||||    
T  22626261 aatttgtaatgttttctatatttgagtc-tgtaatcagagttttcctgaaacatggcaattttagggtgttcttgatgtaattcacgaaaagatcatgca 22626359  T
Q  371 aatcggcaaagcaagaca 388  Q
    ||||||||||| ||||||    
T  22626360 aatcggcaaagtaagaca 22626377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 259 - 386
Target Start/End: Complemental strand, 26101863 - 26101736
Alignment:
Q  259 tatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacg 357  Q
    ||||||||||||| ||||||||||||||||||||| || | |||||||| |||| |||| |||||||||||||| || | |||||| |||||| ||||||    
T  26101863 tatgatttcgggatatttgtaatgttttctatattggaat-atgtaattctattcttcccgaaacatagcaattatagggtgtttttgatgtagttcacg 26101765  T
Q  358 aagaaatcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||||||| ||||||||||||    
T  26101764 aagaaatcatgcaaattggcaaagcaaga 26101736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 237 - 386
Target Start/End: Original strand, 18734657 - 18734806
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    ||||||||||||||  ||||| |||||||| | ||| |||||||||||||| |||||||||| |||||||| || | ||||||||||||||||||| |      
T  18734657 gaggagtattagaacgattgcctatgattttgagacttttgtaatgttttcaatatttgagt-atgtaattctagttttcctgaaacatagcaatttttg 18734755  T
Q  337 gatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |  | |||||| ||||||||||||||||||||||||||||||||| |||||    
T  18734756 ggggtttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaaga 18734806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 384
Target Start/End: Complemental strand, 21848657 - 21848504
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    |||| ||||||||||||||   ||||||||||||||||  |||||||||| |||||||||||||  ||| | | ||||| || |||||||||||||| ||    
T  21848657 aaaacagaggagtattagagcaattgcttatgatttcgacacatttgtaacgttttctatatttaggtc-tattattatgttcttcctgaaacatagaaa 21848559  T
Q  331 ttctatgatgtttt-gatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    || || | |||||| |||||||||||| |||||||||||||||||||||||||||    
T  21848558 ttttagggtgtttttgatgtaattcacaaagaaatcatgcaaatcggcaaagcaa 21848504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 164 - 380
Target Start/End: Original strand, 26611330 - 26611546
Alignment:
Q  164 ttgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatg 262  Q
    ||||||| ||||||||||  ||||||||||| |||||  ||||| | | | |||||| |||| || ||||||  |||||||||| |||  ||||| ||||    
T  26611330 ttgatgacaggtcatcttacgttattcttagcatgtttttcaattaatattagtaggatttagcagcaaaaag-gaggagtattggaatgattgcctatg 26611428  T
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttt-tgatgtaattcacgaaga 361  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||| || | ||||||||| |||||||||  |||  |||| ||| ||||||||| ||||    
T  26611429 atttcaggacttttgtaatgttttctatatttgagtc-tgtaattctagttttcctgaaatatagcaatttgatggggtttctgaagtaattcacaaaga 26611527  T
Q  362 aatcatgcaaatcggcaaa 380  Q
    |||||||||||| ||||||    
T  26611528 aatcatgcaaattggcaaa 26611546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 260 - 388
Target Start/End: Original strand, 15811540 - 15811668
Alignment:
Q  260 atgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacga 358  Q
    |||||||| ||||||||||||||||||||||||||||||| |||| | | | | ||||||||||||||||||| || |  ||| ||||||||||||||||    
T  15811540 atgatttctggacatttgtaatgttttctatatttgagtc-tgtactcagagttttcctgaaacatagcaattttagggggttcttgatgtaattcacga 15811638  T
Q  359 agaaatcatgcaaatcggcaaagcaagaca 388  Q
    ||||||||||||||| || |||||||||||    
T  15811639 agaaatcatgcaaattggaaaagcaagaca 15811668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 237 - 386
Target Start/End: Complemental strand, 20107879 - 20107731
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    ||||||||||||||  | | |||||||||| || || |||||||||||||||||||||||||  |||||||||| | |||| |||||||||||||| ||     
T  20107879 gaggagtattagaacgactacttatgattttggaacttttgtaatgttttctatatttgagtt-tgtaattatagttttcccgaaacatagcaattttag 20107781  T
Q  337 gatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |   |||||| |||| |||||||||||||||||||||||||||| |||||    
T  20107780 gggtttttgaagtaaatcacgaagaaatcatgcaaatcggcaaatcaaga 20107731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 174 - 306
Target Start/End: Complemental strand, 7221604 - 7221472
Alignment:
Q  174 gtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggaca 273  Q
    ||||||||  ||||||||||  |||||  ||| |||||||||  || |||| |||||| |||||| |||||||||||  |||| ||||||||||||||||    
T  7221604 gtcatcttacgttattcttaacatgtttttcagtcattttcaaaagatttttcatcaagaatagatgagtattagaacaattggttatgatttcgggaca 7221505  T
Q  274 tttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||||| |||||||||||||||||||||||    
T  7221504 tttgtaatgctttctatatttgagtcatgtaat 7221472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 165 - 388
Target Start/End: Original strand, 26647357 - 26647579
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| ||||||||||  ||||||||||| || ||  ||| || |||||||||||||||||    ||||  |||||||||||||  || ||| ||||||    
T  26647357 tgatgacaggtcatcttacgttattcttagcatatttttcagtctttttcagtaggttttaccaacaaaacggaggagtattagag-caatgcctatgat 26647455  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaa 363  Q
    |||| | |||||||||||||||||||||||||||| |||||| | | | |||| ||| |||||||||| || | ||||  | ||||||||||||||||||    
T  26647456 ttcgaggcatttgtaatgttttctatatttgagtc-tgtaatcagagttttcccgaatcatagcaattttaaggtgttcattatgtaattcacgaagaaa 26647554  T
Q  364 tcatgcaaatcggcaaagcaagaca 388  Q
    |||||||||| |  |||||||||||    
T  26647555 tcatgcaaattgctaaagcaagaca 26647579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 165 - 388
Target Start/End: Complemental strand, 35133981 - 35133758
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| ||||||||||  |||||   ||| |||||  ||| || |||| ||||||||||||    ||||| ||||||||||| |   ||||| || |||    
T  35133981 tgatgacaggtcatcttacgttatctgtagcatgtttttcagtcttttttagtaggttttaccaacaaaatggaggagtattaaagtaattgcctacgat 35133882  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaa 363  Q
    || || ||||||||||||||||||||||||||||  |||||| | | | || |||||||||||||||| || | |||| |||||||||||||||||||||    
T  35133881 tttggaacatttgtaatgttttctatatttgagtt-tgtaatcagaatttttctgaaacatagcaattttagggtgttcttgatgtaattcacgaagaaa 35133783  T
Q  364 tcatgcaaatcggcaaagcaagaca 388  Q
    ||||| ||||| |||||||||||||    
T  35133782 tcatgaaaatcagcaaagcaagaca 35133758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 163 - 386
Target Start/End: Complemental strand, 14782629 - 14782406
Alignment:
Q  163 attgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttat 261  Q
    |||||||| ||||||||||  ||||||||||| |||||  ||| ||| ||||| ||||||||| || ||||||  ||||| |||||| |  | ||| ||     
T  14782629 attgatgacaggtcatcttacgttattcttagcatgtttttcactcaatttcaataggttttagcagcaaaaag-gaggactattaggacgactgcataa 14782531  T
Q  262 gatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatg--atgttttgatgtaattcacgaa 359  Q
    ||||| | ||| ||||||||||||||||||||| ||||| |||||| || | |||| |||||||||||||| ||||  || |||||| ||||||||||||    
T  14782530 gattttgagacttttgtaatgttttctatatttcagtca-gtaattctagttttcccgaaacatagcaattttatgggat-ttttgaagtaattcacgaa 14782433  T
Q  360 gaaatcatgcaaatcggcaaagcaaga 386  Q
    ||||||||||||||||| ||| |||||    
T  14782432 gaaatcatgcaaatcggaaaatcaaga 14782406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 237 - 386
Target Start/End: Original strand, 15630995 - 15631146
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta- 335  Q
    ||||||||||||||  ||||| |||||||||| ||| ||||||||||||||||||||||||| |||||||| || | |||| |||||||||||||| ||     
T  15630995 gaggagtattagaacgattgcctatgatttcgagacttttgtaatgttttctatatttgagt-atgtaattctagttttcccgaaacatagcaattttag 15631093  T
Q  336 --tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
      | || |||||| ||||||||| |||||||||| ||||| |||||| |||||    
T  15631094 gttaattttttgaagtaattcacaaagaaatcatccaaattggcaaatcaaga 15631146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 185 - 386
Target Start/End: Complemental strand, 16180794 - 16180594
Alignment:
Q  185 ttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    |||||||||| |||||  ||| | |||||||||||  |||| || ||||||  |||||||||||||| |||||| |||||||||||||| ||||||||||    
T  16180794 ttattcttagcatgtttttcagttattttcagtagagtttagcaacaaaaag-gaggagtattagaa-cattgcctatgatttcgggacttttgtaatgt 16180697  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagc 382  Q
    ||||| |||||||||| ||||||| || | ||||| ||||||| ||||| || |  | |||||| |||||||||||||||||  ||||||||| |||| |    
T  16180696 tttctgtatttgagtc-tgtaattctaattttcctaaaacataacaattttagggggtttttgaagtaattcacgaagaaattgtgcaaatcgacaaatc 16180598  T
Q  383 aaga 386  Q
    ||||    
T  16180597 aaga 16180594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 253 - 388
Target Start/End: Original strand, 17543203 - 17543337
Alignment:
Q  253 attgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaat 352  Q
    ||||||||| |||||||||||||||||||||||| | |||| |||| |||||||| |||| ||||  ||||||||||||| ||  |||||||  ||||||    
T  17543203 attgcttattatttcgggacatttgtaatgttttatgtattggagt-atgtaattctattcttccctaaacatagcaattttagcatgttttattgtaat 17543301  T
Q  353 tcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    ||| |||||||| ||||| || ||||||||||||||    
T  17543302 tcatgaagaaataatgcatataggcaaagcaagaca 17543337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 184 - 388
Target Start/End: Complemental strand, 16114878 - 16114674
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    ||||||||||| |||||  |||||||||||||| | |||||||    | || ||| ||||||||||   ||| |  ||||||| ||||||||||||||||    
T  16114878 gttattcttagcatgtttttcaatcattttcagcatgttttaccagcataacagatgagtattagagcaatttcccatgatttagggacatttgtaatgt 16114779  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaatcggcaaagc 382  Q
    |||||||| |||| | |||||||| | || ||||  ||||||||||||| || |||||| ||||||||||||| |||||||||||||| |||   |||||    
T  16114778 tttctataattgaat-atgtaattttgttcttccaaaaacatagcaattttaggatgttcttgatgtaattcatgaagaaatcatgcatatcattaaagc 16114680  T
Q  383 aagaca 388  Q
    ||||||    
T  16114679 aagaca 16114674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 165 - 375
Target Start/End: Complemental strand, 12210362 - 12210150
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||||||||||||||   |||||||||| |||||  ||| ||| ||||||||||||||| || ||||||  ||||||||||||||| ||||  ||| |    
T  12210362 tgatgataggtcatcttacattattcttagcatgtttttcagtcaatttcagtaggttttagcagcaaaaag-gaggagtattagaaagattgtctataa 12210264  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattat-attgttcctgaaacatagcaattctatgatg--ttttgatgtaattcacgaag 360  Q
    ||| || || ||||||||||||||||||||||| |  |||| || | ||| ||||  ||||||||||||| || |  |  |||||| |||||||||||||    
T  12210263 ttttggaacttttgtaatgttttctatatttga-ttttgtatttctaatttttccaaaaacatagcaattttaggggggcttttgaagtaattcacgaag 12210165  T
Q  361 aaatcatgcaaatcg 375  Q
    |||||||||||||||    
T  12210164 aaatcatgcaaatcg 12210150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 278 - 380
Target Start/End: Original strand, 16786206 - 16786308
Alignment:
Q  278 taatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaagaaatcatgcaaatcgg 376  Q
    |||| ||| |||||||||||| |||||||| |||| |||| |||||||||||||| |||| |||||| ||| ||||||||||||||||||||||||||||    
T  16786206 taatatttactatatttgagt-atgtaattctattcttcccgaaacatagcaattttatggtgtttttgatctaattcacgaagaaatcatgcaaatcgg 16786304  T
Q  377 caaa 380  Q
    ||||    
T  16786305 caaa 16786308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 254 - 388
Target Start/End: Original strand, 23035009 - 23035142
Alignment:
Q  254 ttgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaat 352  Q
    |||| ||||||||  ||| ||||||||||||||||||||||||||| |||||| | | | |||| |||||||| ||||| || | |||| ||||||||||    
T  23035009 ttgcatatgattttaggatatttgtaatgttttctatatttgagtc-tgtaatcagagttttcccgaaacataccaattttagggtgttcttgatgtaat 23035107  T
Q  353 tcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
     ||||||||||||||||||||| |||||||||||||    
T  23035108 -cacgaagaaatcatgcaaatcagcaaagcaagaca 23035142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 386
Target Start/End: Original strand, 16915268 - 16915417
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta- 335  Q
    ||||||||||||||  ||||| |||||||| || || ||||||||||||||||||||||||| | |||||| || | |||  ||||||||||||||  |     
T  16915268 gaggagtattagaacgattgcctatgattttggaacttttgtaatgttttctatatttgagt-aagtaattctacttttctcgaaacatagcaatttgag 16915366  T
Q  336 tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
     | | |||||| ||||||||||||||||||||||||||||| ||| |||||    
T  16915367 aggttttttgaagtaattcacgaagaaatcatgcaaatcggaaaatcaaga 16915417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 165 - 362
Target Start/End: Complemental strand, 24464711 - 24464518
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| | ||||||||  ||||||||||| |||||  ||| |||||| ||  ||||||| |||| | |||||||||||||||||   |||||  ||  |    
T  24464711 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcatttccaacaggtttttcatctagaatagaggagtattagagcaattgcg-at--t 24464615  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaa 362  Q
    || |||| ||||||||| ||| ||||||||||||||||||||| || | |||| |||||||||||||| |||| ||||||||| ||| ||||||||||    
T  24464614 tttgggatatttgtaatatttactatatttgagtcatgtaattctact-ttcccgaaacatagcaattatatgttgttttgatataactcacgaagaa 24464518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 231 - 384
Target Start/End: Complemental strand, 27912095 - 27911943
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgattt-cgggacattt-gtaatgttttctatatttgagtcatgtaattata-ttgttcctgaaacatag 327  Q
    ||||||||||||||||||||  ||||  |||||||| | |||||||| ||||||||| ||||  |||||||||  |||| || || || | |||||||||    
T  27912095 aaaatagaggagtattagaacaattgtctatgattttcaggacattttgtaatgtttgctat--ttgagtcat--aattctagttttttcggaaacatag 27912000  T
Q  328 caattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    |||||||| | ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  27911999 caattctagggtgttttgatgtaattcaagaaaaaatcatgcaaatcggcaaagcaa 27911943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 231 - 388
Target Start/End: Complemental strand, 44797148 - 44796991
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    |||| |||| |||||||||   ||||| |||||||||  ||||||||||||||||| |||||||||||| |||||| | | | |||| ||||||||| ||    
T  44797148 aaaacagagaagtattagagtaattgcctatgatttcaagacatttgtaatgttttttatatttgagtc-tgtaatcagagttttcccgaaacatagtaa 44797050  T
Q  331 ttctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    || || | |||| |||||||||||||||||||| ||||||||||||  ||| |||||||    
T  44797049 ttttagggtgttcttgatgtaattcacgaagaagtcatgcaaatcgaaaaaccaagaca 44796991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 165 - 388
Target Start/End: Original strand, 9782979 - 9783203
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| || |||||||  |||||| |||| |||||  ||||||  ||| |||||||||||| |  |||  |||| |||||||||   ||||| ||| ||    
T  9782979 tgatgacagatcatcttacgttattattagcatgtttttcaatctattttagtaggttttacctgcaaaccagagaagtattagagcaattgcctattat 9783078  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaa 363  Q
    ||||| |||| |||||| ||||||||||||||||| ||||||| |||| |||||||||||||| ||||  ||| |||| ||||||||| |||| ||||||    
T  9783079 ttcggaacatatgtaatattttctatatttgagtc-tgtaattctattcttcctgaaacatagaaatttaatggtgttcttgatgtaaatcactaagaaa 9783177  T
Q  364 tcatgcaaatc-ggcaaagcaagaca 388  Q
    |   ||||||| || |||||||||||    
T  9783178 tagagcaaatcaggtaaagcaagaca 9783203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 163 - 386
Target Start/End: Complemental strand, 33192451 - 33192227
Alignment:
Q  163 attgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatg 262  Q
    |||||||| | ||||||||  | ||||||||| |||||  ||| ||| ||||||||||||||||    |||  |||  |||||||||   ||||  || |    
T  33192451 attgatgacaagtcatcttacgctattcttagcatgtttttcagtcaatttcagtaggttttaccagcaaagcagaaaagtattagattaattgtctacg 33192352  T
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaaga 361  Q
    |||||| ||  |||||||||||||||||||||||||| ||||||| |||| ||||  ||||||||||||| || | || |||||| ||||||||| ||||    
T  33192351 atttcgagatgtttgtaatgttttctatatttgagtc-tgtaattctattcttccctaaacatagcaattttagggtgtttttgaagtaattcacaaaga 33192253  T
Q  362 aatcatgcaaatc-ggcaaagcaaga 386  Q
    ||||| ||||||| ||||||||||||    
T  33192252 aatcaagcaaatcaggcaaagcaaga 33192227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 242 - 380
Target Start/End: Original strand, 14780570 - 14780708
Alignment:
Q  242 gtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tgatg 340  Q
    |||||||||  ||||| |||||||||||||| |||||||||||||||||||||||||| | ||||| || | |||| |||||||| |||||  |  |  |    
T  14780570 gtattagaacgattgcctatgatttcgggacttttgtaatgttttctatatttgagtc-tataattctaattttcccgaaacatatcaatttgagggggg 14780668  T
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    |||||| |||||||||||| |||||||||||||| |||||    
T  14780669 ttttgaagtaattcacgaataaatcatgcaaatcagcaaa 14780708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 207 - 388
Target Start/End: Complemental strand, 16363678 - 16363496
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||||||||| ||||||    |||||||||||||||||||   ||||| ||||||||||| ||||||||| | |||||| |||||| ||| | ||||    
T  16363678 tcattttcagtagtttttaccaacaaaatagaggagtattagatcaattgcctatgatttcggaacatttgtattcttttctttatttgtgtc-tataat 16363580  T
Q  307 tatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaatc-ggcaaagcaagaca 388  Q
    | |||| |||| |||||||  || || || | || ||||||||||||||||||| |||||| | ||||| ||||||||||||||    
T  16363579 tctattcttcccgaaacatgtcatttttagggtgtttttgatgtaattcacgaataaatcaagtaaatcaggcaaagcaagaca 16363496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 185 - 388
Target Start/End: Original strand, 25959479 - 25959681
Alignment:
Q  185 ttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgtt 284  Q
    |||||||||| |||||  ||| || |||||||||||||||||    |||| | | ||||||||||   | | | |||||||||| || ||||||| | ||    
T  25959479 ttattcttaggatgtttctcagtctttttcagtaggttttaccggcaaaacatatgagtattagatcaactacctatgatttcgagatatttgtattatt 25959578  T
Q  285 ttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaatc-ggcaaagc 382  Q
    |||||||||||||||   |  || |||| ||||||||||||||||||| |||| |||| ||||| |||||||||||||||||| |||||||  |||||||    
T  25959579 ttctatatttgagtc---tctttctattcttcctgaaacatagcaattttatggtgttcttgatttaattcacgaagaaatcaagcaaatcatgcaaagc 25959675  T
Q  383 aagaca 388  Q
    ||||||    
T  25959676 aagaca 25959681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 237 - 386
Target Start/End: Original strand, 16817180 - 16817329
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta- 335  Q
    ||||||| ||||||  ||||| |||||||||||||| || |||||||||||||||||||| || ||||||  || | |||||||||||||||||||  |     
T  16817180 gaggagtgttagaactattgcctatgatttcgggactttagtaatgttttctatatttgactc-tgtaatactagttttcctgaaacatagcaatttgag 16817278  T
Q  336 tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
     |  ||||||| || |||||||||||||||||||| |||| |||| |||||    
T  16817279 gggggttttgaagtcattcacgaagaaatcatgcatatcgacaaatcaaga 16817329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 161 - 386
Target Start/End: Original strand, 21333067 - 21333288
Alignment:
Q  161 ttattgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgctt 259  Q
    |||||||||| | ||||||||  |||||||||| ||||||   || | | ||||| ||||||||| ||  |||||  ||| ||||||| ||  ||||| |    
T  21333067 ttattgatgacatgtcatcttatgttattcttaatatgttttgcacttagtttcaataggttttagcaggaaaaag-gagaagtattaaaacgattgcct 21333165  T
Q  260 atgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacga 358  Q
    ||||||||||||| ||||||||||||||||||||||| | ||||||    | | ||||  ||||||||||||| || |  | |||||| |||||||||||    
T  21333166 atgatttcgggacttttgtaatgttttctatatttgaat-atgtaa----agttttccaaaaacatagcaattttaggggggttttgaagtaattcacga 21333260  T
Q  359 agaaatcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||||||||||||| |||||    
T  21333261 agaaatcatgcaaatcggcaaatcaaga 21333288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 236 - 388
Target Start/End: Complemental strand, 24283028 - 24282875
Alignment:
Q  236 agaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta 335  Q
    ||||||||||||||   ||| | ||| ||||| |||  ||| |||||||||||||||||| ||| ||||||| |||| |||| ||| |||||||||| ||    
T  24283028 agaggagtattagatcaatttcctataatttcaggaattttttaatgttttctatatttgtgtc-tgtaattctattcttcccgaaccatagcaatttta 24282930  T
Q  336 tgatgtt-ttgatgtaattcacgaagaaatcatgcaaatc-ggcaaagcaagaca 388  Q
     | |||| |||||||||||||||||||||||| ||||| | ||||||||||||||    
T  24282929 gggtgttcttgatgtaattcacgaagaaatcaagcaaaccaggcaaagcaagaca 24282875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 165 - 370
Target Start/End: Complemental strand, 729233 - 729027
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| ||||||||||  ||||||||||| ||| |  ||| ||||||||||||||||||| || ||||||  ||||||||||||||  ||||  |||||    
T  729233 tgatgaaaggtcatcttacgttattcttagcatgcttttcagtcattttcagtaggttttagcagcaaaaag-gaggagtattagaacgattgtctatga 729135  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatga--tgttttgatgtaattcacgaaga 361  Q
    |||| |||| |||||||||||||||| || || ||| | ||| | || | |||| |||| ||||||||| || ||  | |||| | ||||||||||||||    
T  729134 tttcaggacttttgtaatgttttctagatctgtgtc-tctaaatctagttttcccgaaatatagcaattttaggaggtttttttaagtaattcacgaaga 729036  T
Q  362 aatcatgca 370  Q
    |||||||||    
T  729035 aatcatgca 729027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 237 - 386
Target Start/End: Complemental strand, 22624641 - 22624492
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    ||||||||||| ||  ||||| ||||||||||||||  || ||||||||||||||||| |||| ||||||| || | || | ||||||||| |||| ||     
T  22624641 gaggagtattaaaatgattgcctatgatttcgggactcttttaatgttttctatattttagtc-tgtaattctagtttttccgaaacatagaaattttag 22624543  T
Q  337 g--atgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |  || |||||| ||||||||||||||||||||||||||||| ||| |||||    
T  22624542 gggat-ttttgaagtaattcacgaagaaatcatgcaaatcggaaaatcaaga 22624492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 17365826 - 17365747
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgtttt 286  Q
    |||||||||||||||||| |||| ||||||||| ||||||||| | |||| |||||||||||| |||||| |||||||||    
T  17365826 tcattttcagtaggtttttcatccaaaatagagaagtattagagaaattgtttatgatttcggaacatttttaatgtttt 17365747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 374
Target Start/End: Complemental strand, 18827418 - 18827284
Alignment:
Q  240 gagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat-ga 338  Q
    |||||||||||  ||||| |||||||||||||| |||||||| ||||||||||||||||| | ||||| || | ||||  ||||||| ||||| ||| ||    
T  18827418 gagtattagaatgattgcctatgatttcgggacttttgtaattttttctatatttgagtc-tataattctagttttcccaaaacatatcaattttatgga 18827320  T
Q  339 tgttttgatgtaattcacgaagaaatcatgcaaatc 374  Q
      |||||| |||||||| ||||||| ||||||||||    
T  18827319 gtttttgaagtaattcatgaagaaaacatgcaaatc 18827284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 320 - 384
Target Start/End: Complemental strand, 7881738 - 7881673
Alignment:
Q  320 aaacatagcaattctatgatgtttt-gatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  7881738 aaacatagcaattttaggatgtttttgatgtaattcacgaagaaatcatgcaaattggcaaagcaa 7881673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 239 - 332
Target Start/End: Complemental strand, 22665809 - 22665717
Alignment:
Q  239 ggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaatt 332  Q
    |||||| |||| | ||||| ||||||||| ||||||||||||||||||||||||||||||  ||||||| |||| |||  ||||||||||||||    
T  22665809 ggagtactagagaaattgcctatgatttcaggacatttgtaatgttttctatatttgagt-ttgtaattctattcttctcgaaacatagcaatt 22665717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 236 - 386
Target Start/End: Complemental strand, 27546410 - 27546259
Alignment:
Q  236 agaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta 335  Q
    |||||||||||||||  ||||  |||||||| | ||| |||||||||||||||||||||||||| || |||| || | ||||  |||| ||||||||  |    
T  27546410 agaggagtattagaatgattgtctatgattttgagacttttgtaatgttttctatatttgagtc-tgcaattctagttttcccaaaacgtagcaatttga 27546312  T
Q  336 --tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
       | | ||||||  |||||||||||||||||||||||||||||||| |||||    
T  27546311 ggggtttttttgaaataattcacgaagaaatcatgcaaatcggcaaatcaaga 27546259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 208 - 386
Target Start/End: Original strand, 12011227 - 12011404
Alignment:
Q  208 cattttcagtaggttttac-atcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||||||||||||||| | |||||  | | ||||||||||   ||||| ||||||||||  ||||||| ||||||||| ||||||||||| | |||     
T  12011227 cattttcagtaggttttaccagcaaaacga-atgagtattagagcaattgcctatgatttcgaaacatttggaatgttttcaatatttgagtc-tataac 12011324  T
Q  307 tatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    | || | ||||  ||||| ||||||| || | | ||||||  |||||||||||||||||||||||||  |||||||||||    
T  12011325 tctagtcttccctaaacaaagcaattttagggtcttttgagataattcacgaagaaatcatgcaaattagcaaagcaaga 12011404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 184 - 380
Target Start/End: Original strand, 15158807 - 15159004
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaaca-ttgcttatgatttcgggacatttgtaat 281  Q
    ||||||||||| |||||  ||| | ||||| |||||| |||| || ||||||  ||||||||||||||| | |||| ||| |||||||||| ||||||||    
T  15158807 gttattcttagcatgtttttcagttattttaagtaggatttagcagcaaaaag-gaggagtattagaaaaaattgcctataatttcgggacttttgtaat 15158905  T
Q  282 gttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    ||||| ||||||||| |  |||||||  | | ||||  ||||||||||||| || |  | |||| | |||||||||||||||||||||||||| ||||||    
T  15158906 gttttttatatttgaat-ttgtaattcaagttttcccaaaacatagcaattttagggggtttttaaagtaattcacgaagaaatcatgcaaattggcaaa 15159004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 394
Target Start/End: Original strand, 10063028 - 10063189
Alignment:
Q  233 aatagaggagtattagaaacattgcttatgatttcgggacattt-gtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaat 331  Q
    ||||||| ||| ||||||   |||||||||||||| ||| |||| |||||||||| |||| |   ||||||||||| |||| ||    ||||||| ||||    
T  10063028 aatagagaagtgttagaatagttgcttatgatttcaggatattttgtaatgttttttatactat-gtcatgtaattctatttttttcaaaacataacaat 10063126  T
Q  332 tctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagacacttgaa 394  Q
    |||| ||||||||||||||||| ||||| ||||||| |||||| ||||| ||| ||| |||||    
T  10063127 tctaggatgttttgatgtaatttacgaataaatcatacaaatctgcaaaacaaaacatttgaa 10063189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 386
Target Start/End: Complemental strand, 18832240 - 18832091
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    ||||||||||||||  ||| | ||||||||| |||| |||||||||||||| ||||||||||| ||||||| |  | ||||  |||||||||||||  |     
T  18832240 gaggagtattagaacgattacctatgatttcaggacttttgtaatgttttccatatttgagtc-tgtaattctgattttcccaaaacatagcaatttaag 18832142  T
Q  337 gatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |  | |||||| ||| |||||||||||||||||||||| || ||| |||||    
T  18832141 ggggtttttgaagtacttcacgaagaaatcatgcaaattggaaaatcaaga 18832091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 312
Target Start/End: Complemental strand, 24901297 - 24901160
Alignment:
Q  174 gtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggaca 273  Q
    ||||||||  |||||| |||| || ||  ||||||||||||||||| ||||||    |||| |||| |||||||||   ||||||||| ||||| |||||    
T  24901297 gtcatcttacgttatttttagcatatttttcaatcattttcagtagattttaccagcaaaacagagaagtattagatcaattgcttatcatttcaggaca 24901198  T
Q  274 tttgtaatgttttctatatttgagtcatgtaattatatt 312  Q
    |||||| ||||||| ||||||||||| ||||||| ||||    
T  24901197 tttgtattgttttcaatatttgagtc-tgtaattctatt 24901160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 373
Target Start/End: Complemental strand, 28009823 - 28009635
Alignment:
Q  185 ttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    |||||||||| |||||  ||| ||||||||  || |||||| || ||||||  |||||| ||||||   ||||| ||| |||||| |||||||||||| |    
T  28009823 ttattcttagcatgtttttcagtcattttcgctaagttttagcagcaaaaag-gaggagcattagagcaattgcctataatttcgagacatttgtaatct 28009725  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaat 373  Q
    ||||||||||||||| ||||||||  | | |||| |||||||||||||| || |  | |||||  |||| |||||||||||||||||||||    
T  28009724 tttctatatttgagt-atgtaattccagttttcccgaaacatagcaattttagggggtttttggagtaaatcacgaagaaatcatgcaaat 28009635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 388
Target Start/End: Original strand, 15571688 - 15571912
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    ||||||||| |||||||  |||||| |||| |||||  ||| ||| ||| ||||||||||||    |||  ||||||||||||||   ||||  ||||||    
T  15571688 tgatgatagatcatcttacgttatttttagcatgtttttcagtcaattttagtaggttttactagcaaagcagaggagtattagatcaattgtctatgat 15571787  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaa 363  Q
    ||  |||| |||||||| |||||||||||| ||| |||||||| |||| ||||  ||||||| ||||| || |  ||| |||| ||||||||| ||||||    
T  15571788 tttaggacgtttgtaatattttctatatttaagt-atgtaattctattcttcccaaaacataacaattttagggagttcttgaagtaattcacaaagaaa 15571886  T
Q  364 tcatgcaaatc-ggcaaagcaagaca 388  Q
    ||| | ||||| |||||| |||||||    
T  15571887 tcaagaaaatcaggcaaaacaagaca 15571912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 23521419 - 23521346
Alignment:
Q  80 aaagtggattttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaa 153  Q
    |||||||||||||||| ||||||||| |||||| ||||| |||||| | |||||||| ||||||| ||||||||    
T  23521419 aaagtggattttgcttgttttccaagttggatcggtgcaaaaagcccaattttcttcccttaaactctaagtaa 23521346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 386
Target Start/End: Complemental strand, 13267848 - 13267721
Alignment:
Q  259 tatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacg 357  Q
    |||||||| ||||| ||| ||| |||||||||||||||||  ||||||| || | ||||  ||||||| ||||| ||||  ||||| || ||||||||||    
T  13267848 tatgattttgggacttttttaacgttttctatatttgagtt-tgtaattctagttttcccaaaacataacaattttatggggtttttgaagtaattcacg 13267750  T
Q  358 aagaaatcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||||| |||| ||| |||||    
T  13267749 aagaaatcatgcaagtcgggaaatcaaga 13267721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 380
Target Start/End: Original strand, 20033156 - 20033332
Alignment:
Q  203 tcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgattt-cgggacatttgtaatgttttctatatttgagtcat 301  Q
    |||| ||||||||||  |||||| ||||| ||||||||||||||||||  ||| | |||| ||| ||| |||||||||||||||||  || |||| | ||    
T  20033156 tcaaccattttcagttagtttta-atcaagaatagaggagtattagaacaattacctatggttttcggaacatttgtaatgttttc--taattgaattat 20033252  T
Q  302 gtaattatattgttc-ctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    |||||| || | ||| |  ||||||| |||||||| | |||||| || || |||| ||||||||||||||||||| ||||    
T  20033253 gtaattctagttttctccaaaacataccaattctagggtgttttaatttagttcaagaagaaatcatgcaaatcgacaaa 20033332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 292 - 386
Target Start/End: Original strand, 22507501 - 22507595
Alignment:
Q  292 tttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |||||||| ||||||| || | |||| |||||||||||||| || |  ||||| || ||||||||||||||||||||||||||||||||| |||||    
T  22507501 tttgagtc-tgtaattctagttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaaga 22507595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 298 - 384
Target Start/End: Original strand, 31260759 - 31260845
Alignment:
Q  298 tcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    ||||||||||||| | ||||  ||||||| ||||| || | ||||||||||||||| | |||||||||||||||| || ||||||||    
T  31260759 tcatgtaattatagttttcccaaaacatatcaattttaaggtgttttgatgtaatttaagaagaaatcatgcaaaacgacaaagcaa 31260845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 320 - 380
Target Start/End: Original strand, 17016987 - 17017047
Alignment:
Q  320 aaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    ||||||||||||||||   |||||||||||||| || ||| ||||||||||||||||||||    
T  17016987 aaacatagcaattctagagtgttttgatgtaatccaagaataaatcatgcaaatcggcaaa 17017047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 378
Target Start/End: Original strand, 13134256 - 13134295
Alignment:
Q  339 tgttttgatgtaattcacgaagaaatcatgcaaatcggca 378  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  13134256 tgttttgatgtaattcatgaagaaatcatgcaaatcggca 13134295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 380
Target Start/End: Original strand, 12262163 - 12262312
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcggga-ca-tttgtaatgttttctatatttgagtcatgtaattata-ttgttcctgaaacatag 327  Q
    |||||||||||||||||||| |||||| |||| |||  ||| || ||| |||||||||||||  |||||| |||||||| || || |||| |||| ||||    
T  12262163 aaaatagaggagtattagaa-cattgcctatggttttcggagcactttttaatgttttctat--ttgagttatgtaattctagtttttcccgaaaaatag 12262259  T
Q  328 caattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    ||    || ||||||||||||||||| | |||||||||||| |||| ||||||    
T  12262260 cagccataggatgttttgatgtaatttaagaagaaatcatgaaaattggcaaa 12262312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 18098319 - 18098375
Alignment:
Q  236 agaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatat 292  Q
    ||||||||||||||   ||||| |||||||||| |||||||||||| ||||||||||    
T  18098319 agaggagtattagatcaattgcctatgatttcgagacatttgtaatattttctatat 18098375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 23519449 - 23519369
Alignment:
Q  80 aaagtggattttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaaccatatg 160  Q
    |||||||||||  ||| |||| |||| ||||| |||||| ||| |  | |||||||||||||||||| |||||||||||||    
T  23519449 aaagtggatttaacttgtttttcaagttggattagtgcaaaaaacacaattttcttctcttaaacccaaagtaaccatatg 23519369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 25726333 - 25726297
Alignment:
Q  128 gttttcttctcttaaaccctaagtaaccatatgttat 164  Q
    |||||||||||||||||||||||||| ||||||||||    
T  25726333 gttttcttctcttaaaccctaagtaatcatatgttat 25726297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 25734741 - 25734705
Alignment:
Q  128 gttttcttctcttaaaccctaagtaaccatatgttat 164  Q
    |||||||||||||||||||||||||| ||||||||||    
T  25734741 gttttcttctcttaaaccctaagtaatcatatgttat 25734705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 27460586 - 27460522
Alignment:
Q  89 tttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaa 153  Q
    ||||||||||||||  |||||||  ||| | ||||| ||||||||||||||||| ||||||||||    
T  27460586 tttgcttattttccgggctggattggtggaaaaagcttagttttcttctcttaacccctaagtaa 27460522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 18300708 - 18300674
Alignment:
Q  130 tttcttctcttaaaccctaagtaaccatatgttat 164  Q
    |||||||||||||||||||||||| ||||||||||    
T  18300708 tttcttctcttaaaccctaagtaatcatatgttat 18300674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 21451690 - 21451624
Alignment:
Q  88 ttttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaac 154  Q
    |||||||| |||||| ||||||||| | | |||||||| | ||||||||||||||  ||||||||||    
T  21451690 ttttgcttgttttcctagctggatcggcggataaagcccaattttcttctcttaatacctaagtaac 21451624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 286
Target Start/End: Complemental strand, 9403686 - 9403610
Alignment:
Q  210 ttttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgtttt 286  Q
    |||||||||||||||| || |||||| | |||||||||||||   |||| |||||||||||||| |||||||| ||||    
T  9403686 ttttcagtaggttttagcagcaaaaaga-aggagtattagaacgtttgcctatgatttcgggacttttgtaatttttt 9403610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 1e-54; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 164 - 388
Target Start/End: Complemental strand, 20886966 - 20886743
Alignment:
Q  164 ttgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatga 263  Q
    ||||||| ||||||||||  ||||||||||| |||||  |||||| |||||| ||||||||||||| | |||||||||||||||     || ||||||||    
T  20886966 ttgatgacaggtcatcttacgttattcttagcatgtttttcaatcgttttcaataggttttacatccagaatagaggagtattaacgcaatcgcttatga 20886867  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaa 363  Q
    |||||||||||||||  ||||||||||||||||||| | ||||| |||| |||| ||||||| |||||| || |  ||||||||||||||||||||||||    
T  20886866 tttcgggacatttgttttgttttctatatttgagtc-tataattctattcttcccgaaacatggcaattttaaggcgttttgatgtaattcacgaagaaa 20886768  T
Q  364 tcatgcaaatcggcaaagcaagaca 388  Q
    |||||||||||||||||||||||||    
T  20886767 tcatgcaaatcggcaaagcaagaca 20886743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 165 - 382
Target Start/End: Complemental strand, 7805839 - 7805623
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| ||||||||||  ||||||||||| |||||  |||||||||||||||| |||||||||| |||||||||||||||||||   ||| ||||||||    
T  7805839 tgatgacaggtcatcttacgttattcttagcatgtttttcaatcattttcagtatgttttacatccaaaatagaggagtattagagcaattacttatgat 7805740  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaat 364  Q
    || |  ||||||||||||||||| ||||||||||| | ||||||||||  |||  |||| |||||||  || | ||||||| ||||||||||||||||||    
T  7805739 tttgatacatttgtaatgttttcaatatttgagtc-tttaattatattcgtcccaaaacgtagcaatattacggtgttttgttgtaattcacgaagaaat 7805641  T
Q  365 catgcaaatcggcaaagc 382  Q
    || ||| |||| ||||||    
T  7805640 cacgcatatcgtcaaagc 7805623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 165 - 386
Target Start/End: Original strand, 31283903 - 31284125
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| |||||||||   ||||||||||  |||||  ||||||||||| ||||||||||||    ||  |||| ||||||||||   ||||||||||||    
T  31283903 tgatgacaggtcatctaacgttattcttatcatgtttttcaatcattttaagtaggttttaccaacaatgtagaagagtattagagcaattgcttatgat 31284002  T
Q  265 ttcgggacatttgtaatg-ttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaa 362  Q
    |||||||||||||||||| |||| |||||||||||| ||||||| |||| ||||  ||||||||||||| || | || ||||||||||||| ||||||||    
T  31284003 ttcgggacatttgtaatgtttttttatatttgagtc-tgtaattctattattcccaaaacatagcaattttagggtgtttttgatgtaattgacgaagaa 31284101  T
Q  363 atcatgcaaatcggcaaagcaaga 386  Q
    ||||||||||||||||||||||||    
T  31284102 atcatgcaaatcggcaaagcaaga 31284125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 172 - 380
Target Start/End: Complemental strand, 8145338 - 8145130
Alignment:
Q  172 aggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcggg 270  Q
    ||||||||||   |||||||||| |||||  ||||||| ||||||||||||||| || ||||||| ||||||||||| ||  ||||| ||||||||||||    
T  8145338 aggtcatcttacattattcttagcatgtttttcaatcaatttcagtaggttttagcagcaaaaat-gaggagtattaaaacaattgcctatgatttcggg 8145240  T
Q  271 acatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgc 369  Q
    || ||||||||||||||||||||||||| ||||||||||| | |||| |||||||||||||| || |  | ||||||  ||||||||||| |||||||||    
T  8145239 acttttgtaatgttttctatatttgagt-atgtaattatagttttcccgaaacatagcaattttagggggtttttgaaataattcacgaacaaatcatgc 8145141  T
Q  370 aaatcggcaaa 380  Q
    |||||||||||    
T  8145140 aaatcggcaaa 8145130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 183 - 380
Target Start/End: Original strand, 13906601 - 13906798
Alignment:
Q  183 agttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatg 282  Q
    |||||||||||| |||||  ||  ||| ||| |||||||||| ||   | ||| |||||||||||||   ||||||||||||||||||||||||||||||    
T  13906601 agttattcttagcatgtttttctgtcaattttagtaggttttgcaagtataatggaggagtattagatcaattgcttatgatttcgggacatttgtaatg 13906700  T
Q  283 ttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgt-aattcacgaagaaatcatgcaaatcggcaaa 380  Q
    ||||||||||||||||| ||||||| |||| |||| |||||||||||||| || ||||||||| ||| ||||||| ||||||||||||| |||||||||    
T  13906701 ttttctatatttgagtc-tgtaattctattcttcccgaaacatagcaattttaggatgttttgttgtaaattcacaaagaaatcatgcatatcggcaaa 13906798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 174 - 386
Target Start/End: Complemental strand, 22247084 - 22246873
Alignment:
Q  174 gtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggaca 273  Q
    ||||||||  ||||||||||| || ||  ||| ||||||||||||||||||||    |||||||||||||||||||   ||||  |||||||| ||||||    
T  22247084 gtcatcttacgttattcttagcattttt-tcagtcattttcagtaggttttaccagcaaaatagaggagtattagagcaattgactatgattttgggaca 22246986  T
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaa 372  Q
    ||||||||||||||||||||| |||| ||||||| | || ||||| |||||||| |||| || |||| |||||||||||||||||||||||||||| | |    
T  22246985 tttgtaatgttttctatatttaagtc-tgtaattctgttcttcctaaaacatagaaattttaggatgtttttgatgtaattcacgaagaaatcatgtata 22246887  T
Q  373 tcggcaaagcaaga 386  Q
    ||||||||||||||    
T  22246886 tcggcaaagcaaga 22246873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 220 - 388
Target Start/End: Original strand, 28326189 - 28326356
Alignment:
Q  220 gttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctg 319  Q
    |||||||||| | |||||| |||||||||| | ||||||||||||||||||||||||| |||||||||| |||||||||| ||  ||| |||| |||| |    
T  28326189 gttttacatctagaatagatgagtattagagaaattgcttatgatttcgggacatttggaatgttttctgtatttgagtc-tgcgattctattcttcccg 28326287  T
Q  320 aaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    ||||||||  ||| || | ||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  28326288 aaacatagttattttagggtgttttgatgtaattgacgaagaaatcatgcaaatcggcaatgcaagaca 28326356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 165 - 379
Target Start/End: Complemental strand, 8765771 - 8765557
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    ||||||||| ||||| |  ||||||||||| |||||  ||| ||||||||| |||||||||  |  |||| |||||||||||||||  ||| | ||||||    
T  8765771 tgatgatagatcatcctacgttattcttagcatgtttttcagtcattttcaataggttttagctgcaaaaaagaggagtattagaacgatttcctatgat 8765672  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaa 363  Q
    |||||||| |||||||||||||||||||||||||| ||||||| || | ||| ||||||||||||||| || |  | |||||| ||||||||||||||||    
T  8765671 ttcgggacttttgtaatgttttctatatttgagtc-tgtaattctagttttcttgaaacatagcaattttagggggtttttgaagtaattcacgaagaaa 8765573  T
Q  364 tcatgcaaatcggcaa 379  Q
    ||||||| ||||||||    
T  8765572 tcatgcagatcggcaa 8765557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 165 - 388
Target Start/End: Original strand, 819846 - 820068
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||||||||||||||  ||||||||||| |||||  ||| ||| |||||||||||||||||   | |||||||||||||||||    |||||||||||    
T  819846 tgatgataggtcatcttacgttattcttagcatgtttttcagtcaatttcagtaggttttacaagcataatagaggagtattagatcatttgcttatgat 819945  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgt-aattcacgaagaaa 363  Q
    ||||||| ||||| |||||||| |||||||||    ||||||| |||| |||| |||||||||||||| || |||| |||| ||| || ||| |||||||    
T  819946 ttcgggatatttgaaatgttttttatatttga--actgtaattctattattcccgaaacatagcaattttaggatgatttgttgtaaaatcaagaagaaa 820043  T
Q  364 tcatgcaaatcggcaaagcaagaca 388  Q
    ||||||| |||| ||||||||||||    
T  820044 tcatgcatatcgacaaagcaagaca 820068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 226 - 384
Target Start/End: Complemental strand, 3003095 - 3002935
Alignment:
Q  226 catcaaaaatagaggag--tattagaaacattgcttatgattt-cgggacattt-gtaatgttttctatatttgagtcatgtaattatattgttcctgaa 321  Q
    |||||| ||||||||||  |||||||   |||||||||||||| | ||| |||| ||||||||||||||  ||||||||||||||| || | ||||||||    
T  3003095 catcaagaatagaggagcatattagagcaattgcttatgattttcaggatattttgtaatgttttctat--ttgagtcatgtaattctacttttcctgaa 3002998  T
Q  322 acatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||    
T  3002997 acatagcaattctacggtgttttgatgtaattcaagaagaaatcatgcaaatcggcaaagcaa 3002935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 162 - 388
Target Start/End: Original strand, 22470399 - 22470628
Alignment:
Q  162 tattgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttat 261  Q
    ||||||||| | ||||||||  ||||||||||| |||||  ||| |||||||||||| |||||||    |||| |||||||| |||||   ||||| |||    
T  22470399 tattgatgacatgtcatcttacgttattcttagcatgtttttcagtcattttcagtatgttttaccagcaaaacagaggagtgttagagcaattgcatat 22470498  T
Q  262 gatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg---ttttgatgtaattc-acg 357  Q
    ||||||| ||||||||||||||||| |||||||||||| ||||||| | || ||| ||||||||||||||| || ||||   |||| ||||||||| ||     
T  22470499 gatttcgtgacatttgtaatgttttttatatttgagtc-tgtaattctgttcttcgtgaaacatagcaattttaggatgtttttttaatgtaattcaaca 22470597  T
Q  358 aagaaatcatgcaaatcggcaaagcaagaca 388  Q
    ||||||||||||||||| ||||| |||||||    
T  22470598 aagaaatcatgcaaatcagcaaaacaagaca 22470628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 388
Target Start/End: Complemental strand, 5510100 - 5509943
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    ||||||||||||||||| |   ||| | ||| ||||| ||||||||||||||||||||||||||||||| | |||| | | | |||| ||||||||||||    
T  5510100 aaaatagaggagtattaaagtaatttcctataatttcaggacatttgtaatgttttctatatttgagtc-tataatcagagttttcccgaaacatagcaa 5510002  T
Q  331 ttctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    || || |||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  5510001 ttttaggatgttcttgatgtaattcacgaagaaatcatgcaaatcggaaaagcaagaca 5509943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 185 - 393
Target Start/End: Complemental strand, 26092982 - 26092773
Alignment:
Q  185 ttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgattt-cgggacatttgtaatgt 283  Q
    |||||||||| || ||  ||||| |||||||||  ||||| |||| | ||||||||||||||||||  ||||  |||| ||| ||||||||||||||| |    
T  26092982 ttattcttagcatatttttcaattattttcagttagtttt-catctagaatagaggagtattagaacaattgtctatggttttcgggacatttgtaat-t 26092885  T
Q  284 tttctatatttgagtcatgtaattata---ttgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    |||||||||| ||||||| ||||| ||   || || | ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||    
T  26092884 tttctatatt-gagtcatataattctagttttttttccgaaacatagcaattctatggtgttttgatgtaattcaagaagaaatcatgcaaatcggtaaa 26092786  T
Q  381 gcaagacacttga 393  Q
    |||| ||| ||||    
T  26092785 gcaaaacatttga 26092773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 388
Target Start/End: Original strand, 3114728 - 3114932
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    ||||||||||| |||||  ||| || ||| |||||||||||||    |||| ||||||||||||||   ||||| |||||||||| || ||||| |||||    
T  3114728 gttattcttagcatgtttttcagtcttttacagtaggttttaccagcaaaacagaggagtattagagtaattgcctatgatttcgagatatttgaaatgt 3114827  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaatcggcaaagc 382  Q
    |||||||||||||||  | |||| | | | |||| |||||||||||||| || | |||| ||||||| ||||||||||||||||||||||||| ||||||    
T  3114828 tttctatatttgagtttt-taatcagaattttcccgaaacatagcaattttagggtgttcttgatgttattcacgaagaaatcatgcaaatcgacaaagc 3114926  T
Q  383 aagaca 388  Q
    ||||||    
T  3114927 aagaca 3114932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 237 - 386
Target Start/End: Original strand, 8881473 - 8881621
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    ||||||||||||||  ||||| ||||||||  |||| ||| |||||||||||||||||||||| |||||||||| | ||||  ||| ||||||||| ||     
T  8881473 gaggagtattagaacgattgcctatgattttaggacttttataatgttttctatatttgagtc-tgtaattatagttttcccaaaatatagcaattttag 8881571  T
Q  337 gatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |  ||||||| ||||||||||||||||||||||||||||||||| |||||    
T  8881572 ggggttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaaga 8881621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 231 - 386
Target Start/End: Original strand, 20021883 - 20022038
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    ||||| ||||||||||||||  ||||  | ||||||| |||| ||||||||||||||||||||||||| ||||||||||| | ||||| |||||||||||    
T  20021883 aaaatggaggagtattagaacgattgtctgtgatttcaggacttttgtaatgttttctatatttgagt-atgtaattatagttttcctaaaacatagcaa 20021981  T
Q  331 ttcta-tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    ||  | ||   |||||| ||||||||||||||||||||||||||||||||| |||||    
T  20021982 ttagagtgggtttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaaga 20022038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 165 - 386
Target Start/End: Original strand, 18457111 - 18457331
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| ||||||||||  | ||||||||| |||||  ||| | ||||||||||||||||| || ||||||  ||||||||||||||  ||||| |||||    
T  18457111 tgatgacaggtcatcttacgctattcttaggatgttattcagttattttcagtaggttttagcagcaaaaag-gaggagtattagaacaattgcctatga 18457209  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaagaa 362  Q
    ||||||||| ||||||||||||||||||||||||| | ||| || ||   |||| |||||||| ||||| ||  | |||||||| |||||||||||||||    
T  18457210 tttcgggacttttgtaatgttttctatatttgagt-aggtatttttagctttcccgaaacata-caattttaggggtgttttgaagtaattcacgaagaa 18457307  T
Q  363 atcatgcaaatcggcaaagcaaga 386  Q
    |||||| ||||| ||||| |||||    
T  18457308 atcatgtaaatcagcaaatcaaga 18457331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 207 - 376
Target Start/End: Complemental strand, 17135147 - 17134978
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||| ||||||||||||    ||||||||||||||||| |   ||||  ||||||||| ||||||||||| |||||||||||||||||| |||||||    
T  17135147 tcatttttagtaggttttactagcaaaatagaggagtattatattaattgtctatgatttccggacatttgtattgttttctatatttgagt-atgtaat 17135049  T
Q  307 tatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaatcgg 376  Q
    | |||| |||| ||||||||||||||  | | |||| |||||||||||||||||||||||| | |||||||    
T  17135048 tctattattcccgaaacatagcaatttaagggtgttcttgatgtaattcacgaagaaatcaagaaaatcgg 17134978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 388
Target Start/End: Original strand, 18735364 - 18735493
Alignment:
Q  259 tatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacg 357  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||||||||||| |||  | |||||||||||| || | |||| ||||||||||||||     
T  18735364 tatgatttcgggacatttgtattgttttctatatttcagtc-tgtaattatattcttctcggaacatagcaattttaggttgttcttgatgtaattcaca 18735462  T
Q  358 aagaaatcatgcaaatcggcaaagcaagaca 388  Q
    ||||||||||||||||| |||| ||||||||    
T  18735463 aagaaatcatgcaaatcagcaatgcaagaca 18735493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 164 - 386
Target Start/End: Complemental strand, 19912678 - 19912455
Alignment:
Q  164 ttgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatg 262  Q
    ||||||| ||||||||||  ||||||||||| || ||  ||| ||||||||||||||||||| || |||||| |||||||||||||||  ||||  ||||    
T  19912678 ttgatgacaggtcatcttacgttattcttagcatatttttcagtcattttcagtaggttttagcagcaaaaa-agaggagtattagaacgattgtgtatg 19912580  T
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg--ttttgatgtaattcacgaag 360  Q
    || || | || |||||||||||||||||||||||| | ||||||| || | |||| |||||||| ||||| || |  |  |||||| |||||||| ||||    
T  19912579 atatcagaacttttgtaatgttttctatatttgagac-tgtaattctagttttcccgaaacataacaattttaagggggtttttgaagtaattcatgaag 19912481  T
Q  361 aaatcatgcaaatcggcaaagcaaga 386  Q
    ||||||||||||| |||||| |||||    
T  19912480 aaatcatgcaaattggcaaatcaaga 19912455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 386
Target Start/End: Original strand, 12372370 - 12372551
Alignment:
Q  203 tcaatcattttcagtaggttttac-atcaaaaatagaggagtattagaaacattg-cttatgatttcgggacatttgtaatgttttctatatttgagtca 300  Q
    |||||||||||||||||||||||| | ||||||  |||||||||||||| || || | |||||||| ||||||||||||||||||||| ||||||||||     
T  12372370 tcaatcattttcagtaggttttacgagcaaaaag-gaggagtattagaa-cagtgacctatgattttgggacatttgtaatgttttctgtatttgagtc- 12372466  T
Q  301 tgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    ||||||| || | |||| ||||||||| |||| || | | |||||| |||||||||||| ||||||||  ||||||||||||||||    
T  12372467 tgtaattctagtcttccagaaacatagtaattttagggt-ttttgaagtaattcacgaacaaatcatgtgaatcggcaaagcaaga 12372551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 237 - 376
Target Start/End: Complemental strand, 14977831 - 14977692
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta- 335  Q
    ||||||||||| ||  ||||| |||||||||||||| ||||||||||||||||||||||||| |||||||| || | |||| ||||||||||| || ||     
T  14977831 gaggagtattataacaattgcctatgatttcgggacttttgtaatgttttctatatttgagt-atgtaattctagttttcccgaaacatagcatttttag 14977733  T
Q  336 tgatgttttgatgtaattcacgaagaaatcatgcaaatcgg 376  Q
     |  ||||||| |||||||||||||||||||||||||||||    
T  14977732 gggggttttgaagtaattcacgaagaaatcatgcaaatcgg 14977692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 388
Target Start/End: Original strand, 23054626 - 23054799
Alignment:
Q  210 ttttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattat 309  Q
    ||||||||||||||| |||| | ||||||| ||||||| ||  ||||||||||||||||| |||| | ||   |||||||||||||| ||||| |||| |    
T  23054626 ttttcagtaggtttttcatctagaatagagaagtattacaacaattgcttatgatttcgg-acatgtata---ttttctatatttgaatcatgaaattct 23054721  T
Q  310 attgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    | | || | |||||||| ||||| || ||| |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  23054722 actttttc-gaaacatatcaattttaagatattttgatgtaattcacgaagaaatcatgtaaatcggaaaagcaagaca 23054799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 231 - 386
Target Start/End: Complemental strand, 27073983 - 27073828
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    ||||| ||||||||||||||  ||| | ||||||||||| |  |||||||||||||||||||||||||| ||||||| || | |||| ||||||||||||    
T  27073983 aaaatggaggagtattagaacaattccctatgatttcggaaattttgtaatgttttctatatttgagtc-tgtaattctagttttcccgaaacatagcaa 27073885  T
Q  331 ttcta-tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    || ||  |   |||||| ||||||||||||||||||||||||||||||||| |||||    
T  27073884 ttttagcgggtttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaaga 27073828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 165 - 386
Target Start/End: Original strand, 13938846 - 13939067
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| ||||||| ||  ||||||||||| |||||  | || || ||||||||||||||| || ||||||  ||||||||||||||  |||||  ||||    
T  13938846 tgatgacaggtcattttacgttattcttagcatgttgttaaagcaatttcagtaggttttagcaccaaaaag-gaggagtattagaacgattgccaatga 13938944  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaa 362  Q
    ||||||||| |||||||||||| ||||||||| ||| |||| || || | || | ||||||| |||||| ||||  | |||||| |||||||||||||||    
T  13938945 tttcgggacttttgtaatgtttgctatatttgtgtc-tgtagttctagtttttccgaaacattgcaattttatggggtttttgaagtaattcacgaagaa 13939043  T
Q  363 atcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||||| ||| |||||    
T  13939044 atcatgcaaatcggaaaatcaaga 13939067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 211 - 388
Target Start/End: Complemental strand, 16223542 - 16223365
Alignment:
Q  211 tttcagtaggttttac-atcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattat 309  Q
    |||||||||||||||| |||||||  | |||||||||||| | ||| | ||||||||  |||||||| ||||||||||||||||||||| |||||||||     
T  16223542 tttcagtaggttttaccatcaaaac-ataggagtattagagaaatttcctatgattttaggacatttataatgttttctatatttgagt-atgtaattag 16223445  T
Q  310 attgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    | | |||| ||||||||| |||| || | |||| |||||||||||||||||||||||||| |||| | ||||||| ||||    
T  16223444 agttttcccgaaacatagaaattttagggtgttcttgatgtaattcacgaagaaatcatggaaattgacaaagcatgaca 16223365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 242 - 377
Target Start/End: Complemental strand, 18747826 - 18747691
Alignment:
Q  242 gtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg- 340  Q
    |||||||||  ||||| ||| |||||||||| ||||||||||||||||||||||||| |||||||| || | |||| |||||||||| ||| ||||  |     
T  18747826 gtattagaacgattgcctatcatttcgggacttttgtaatgttttctatatttgagt-atgtaattctagttttcccgaaacatagctattttatgggga 18747728  T
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcggc 377  Q
    |||||| |||||||||||||||||||| |||||||||    
T  18747727 ttttgaagtaattcacgaagaaatcatccaaatcggc 18747691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 207 - 386
Target Start/End: Original strand, 2166076 - 2166256
Alignment:
Q  207 tcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaa 305  Q
    ||||||||||||||||||| || ||||||  ||||||||||| ||  ||||  |||| ||||||||| ||||||||||||||||||||||| |  |||||    
T  2166076 tcattttcagtaggttttagcaacaaaaag-gaggagtattaaaacgattgaatatgctttcgggacttttgtaatgttttctatatttgaat-ttgtaa 2166173  T
Q  306 ttatattgttcctgaaacatagcaattcta--tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    || || | |||| |||||||||||||| ||   | | |||||| |||||||||||||||||||||||||| |||||| |||||    
T  2166174 ttctagttttcccgaaacatagcaattttaggggtttttttgaagtaattcacgaagaaatcatgcaaattggcaaatcaaga 2166256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 165 - 332
Target Start/End: Complemental strand, 8770661 - 8770495
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    ||||||||| ||||| |  ||||||||||| |||||  ||| ||||||||| |||||||||  |  |||| |||||||||||||||  ||| | ||||||    
T  8770661 tgatgatagatcatcctacgttattcttagcatgtttttcagtcattttcaataggttttagctgcaaaaaagaggagtattagaacgatttcctatgat 8770562  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaatt 332  Q
    ||||| || |||||||||||||||||||||||||  ||||||| || | ||| |||||||||||||||    
T  8770561 ttcggaacttttgtaatgttttctatatttgagt-ttgtaattctagttttcttgaaacatagcaatt 8770495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 388
Target Start/End: Original strand, 19387944 - 19388073
Alignment:
Q  259 tatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacg 357  Q
    |||||||| | || |||| || ||||||||||||||||||| ||||||| |||| ||||  ||||||| ||||| |||| |||| |||||||||||||||    
T  19387944 tatgattttgagatatttatattgttttctatatttgagtc-tgtaattctattcttcccaaaacatatcaattttatggtgttcttgatgtaattcacg 19388042  T
Q  358 aagaaatcatgcaaatcggcaaagcaagaca 388  Q
    |||||||||| |||||||| |||||||||||    
T  19388043 aagaaatcattcaaatcgggaaagcaagaca 19388073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 165 - 310
Target Start/End: Original strand, 52935533 - 52935674
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||||||||||||||  ||||||||||| |||||  ||||||||||||||||||||||||    |||| ||| || |||||||   |||||   ||||    
T  52935533 tgatgataggtcatcttacgttattcttagcatgtttttcaatcattttcagtaggttttaccagcaaaacagatgaatattagagtaattgc---tgat 52935629  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattata 310  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||    
T  52935630 ttcgggacatttgtaacgtttgctatatttgagtc-tgtaattata 52935674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 361
Target Start/End: Complemental strand, 18535868 - 18535671
Alignment:
Q  164 ttgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatga 263  Q
    ||||||| | ||||||||  ||||||||||| |||||  ||| ||| ||| ||||||||||||    |||  ||||||||||||||   |||||||||||    
T  18535868 ttgatgacaagtcatcttacgttattcttagcatgtttttcagtcaattttagtaggttttaccagcaaagcagaggagtattagatcaattgcttatga 18535769  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaaga 361  Q
    |||||||||||||||| ||||||||||||| ||||| | ||||| |||| |||| |||  |||  |||| || | |||| |||||||||||||||||||    
T  18535768 tttcgggacatttgtattgttttctatattcgagtc-tataattctattattcccgaagtataaaaattttagggtgttcttgatgtaattcacgaaga 18535671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 237 - 386
Target Start/End: Complemental strand, 19170079 - 19169931
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    |||||||||||| |  ||||| ||||||||| |||  |||||||||| || |||||||||||| ||||||| || | |||| ||||| || |||||  |     
T  19170079 gaggagtattagcacgattgcctatgatttccggaattttgtaatgtcttatatatttgagtc-tgtaattctagttttcccgaaacgtaacaatttgag 19169981  T
Q  337 gatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |  ||||||| ||||||||||||||||||||||||||||||||| |||||    
T  19169980 ggggttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaaga 19169931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 388
Target Start/End: Complemental strand, 6075964 - 6075845
Alignment:
Q  269 ggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaa-ttcacgaagaaatcat 367  Q
    ||||||||||||||||||| |||||||||| |||||||||| || || ||||||| ||| |||| || |||||||||  |||| ||||||||||||||||    
T  6075964 ggacatttgtaatgttttccatatttgagt-atgtaattatgttctttctgaaacttagaaattttaggatgttttgtcgtaaattcacgaagaaatcat 6075866  T
Q  368 gcaaatcggcaaagcaagaca 388  Q
    ||| || ||||| ||||||||    
T  6075865 gcatataggcaatgcaagaca 6075845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 165 - 380
Target Start/End: Original strand, 34276437 - 34276654
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| ||||||| ||  ||||||||||| || ||  ||| ||||||||||||||||||| || ||||||  ||||||||||| ||  ||||| |||||    
T  34276437 tgatgacaggtcattttacgttattcttagcatatttttcagtcattttcagtaggttttagcagcaaaaag-gaggagtattataacgattgcctatga 34276535  T
Q  264 tttcgggacatttgtaatgttttctata-tttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg--ttttgatgtaattcacgaag 360  Q
    ||| ||||| |||||||| ||||||||| |||||||| ||||||| || | ||||  ||||| | ||||| || |  |  |||||| ||||||||||||     
T  34276536 ttttgggacttttgtaatattttctatattttgagtc-tgtaattctagttttcccaaaacacaacaattttaagggggtttttgaagtaattcacgaaa 34276634  T
Q  361 aaatcatgcaaatcggcaaa 380  Q
    ||||||||||||||||||||    
T  34276635 aaatcatgcaaatcggcaaa 34276654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 237 - 386
Target Start/End: Original strand, 16228416 - 16228565
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta- 335  Q
    ||||||||||||||  ||||| |||||||| ||||| ||||| |||||||||||||||||||  ||| ||| || | |||| ||||||||| |||| ||     
T  16228416 gaggagtattagaactattgcctatgattttgggacttttgtcatgttttctatatttgagt-ttgtgattctaattttcccgaaacatagaaattttag 16228514  T
Q  336 tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
     | | |||||| |||||||| |||||||||||||||||||| ||| |||||    
T  16228515 gggttttttgaagtaattcaagaagaaatcatgcaaatcggaaaatcaaga 16228565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 386
Target Start/End: Original strand, 8115366 - 8115505
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    ||||||||||||||  ||||| |||||| | ||||| |||||||| |||||||||||||||| |||||||| || | || | ||||||||||| ||        
T  8115366 gaggagtattagaacgattgcctatgatattgggacttttgtaatattttctatatttgagt-atgtaattctagtttttcagaaacatagcattt---- 8115460  T
Q  337 gatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
         ||||| ||||||||||||||||||||||||||||||||| |||||    
T  8115461 -----tttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaaga 8115505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 366
Target Start/End: Complemental strand, 19533802 - 19533678
Alignment:
Q  242 gtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg- 340  Q
    |||||||||  ||||| |||||||||| ||| |||||||||||||||||||||||||| ||||||| || | |||| ||||||||||||||  | |  |     
T  19533802 gtattagaacgattgcctatgatttcgagacttttgtaatgttttctatatttgagtc-tgtaattctagttttcccgaaacatagcaatttgagggggt 19533704  T
Q  341 ttttgatgtaattcacgaagaaatca 366  Q
    |||||| |||||||||||||||||||    
T  19533703 ttttgaagtaattcacgaagaaatca 19533678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 238 - 374
Target Start/End: Original strand, 19909102 - 19909238
Alignment:
Q  238 aggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatg 337  Q
    |||||||||||||  ||| | |||||||||||||| ||||| ||||||||||||||| |||| ||||||| || | |||| | |||||||||||| || |    
T  19909102 aggagtattagaacgattccctatgatttcgggacttttgttatgttttctatatttaagtc-tgtaattgtagttttcccggaacatagcaattttagg 19909200  T
Q  338 atg-ttttgatgtaattcacgaagaaatcatgcaaatc 374  Q
      | ||||||  ||||||||||||||||||||||||||    
T  19909201 gggtttttgaaataattcacgaagaaatcatgcaaatc 19909238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 207 - 312
Target Start/End: Original strand, 27852645 - 27852749
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||||||||||||||||||| | |||| ||||||| ||||    |||| ||||||||||||||||||||||  |||| ||||||||||| |||||||    
T  27852645 tcattttcagtaggttttacatccagaataaaggagtaatagagcagttgcatatgatttcgggacatttgtaacattttatatatttgagt-atgtaat 27852743  T
Q  307 tatatt 312  Q
    ||||||    
T  27852744 tatatt 27852749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 307 - 388
Target Start/End: Original strand, 27853056 - 27853137
Alignment:
Q  307 tatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    |||||| || |||||||||||||||| || ||| ||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  27853056 tatattctttctgaaacatagcaattttaggatattttgttgtaattcatgaagaaatcatgcatatcggcaaagcaagaca 27853137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 380
Target Start/End: Original strand, 12771206 - 12771416
Alignment:
Q  169 gataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttc 267  Q
    |||||||||||||  ||||||||||| |||||  ||| ||||||||||||  ||||| || ||||||| || |||||||||||  ||| | | ||||||     
T  12771206 gataggtcatcttacgttattcttagcatgtttttcagtcattttcagtatattttagcagcaaaaat-gatgagtattagaacgatttcctgtgatttt 12771304  T
Q  268 gggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcat 367  Q
    |  || |||||||||||||| ||||||||||  ||||||| || | |||  |||||||||||||| || |   |||||| ||||| ||||||||||||      
T  12771305 gaaacttttgtaatgttttcgatatttgagt-ttgtaattctagttttctcgaaacatagcaattttaggggtttttgaagtaatccacgaagaaatcga 12771403  T
Q  368 gcaaatcggcaaa 380  Q
    |||||||||||||    
T  12771404 gcaaatcggcaaa 12771416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 172 - 373
Target Start/End: Original strand, 20891652 - 20891850
Alignment:
Q  172 aggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcggga 271  Q
    ||||||||||  ||||||||||| || ||  ||| || |||||||||||||||||    |||| | |||| ||||| |   ||||| |||||| ||||||    
T  20891652 aggtcatcttacgttattcttagcatatttttcagtcgttttcagtaggttttaccaacaaaacataggaatattatatcaattgcctatgatatcggga 20891751  T
Q  272 catttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgca 370  Q
    |||||||| |||||||||| ||||||| |||   ||||||| ||||  ||||||||||||| || | |||| |||| ||||||||||||||||||| |||    
T  20891752 catttgtattgttttctatgtttgagt-atg---ttatattattcccaaaacatagcaattttagggtgttcttgaggtaattcacgaagaaatcaagca 20891847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 165 - 296
Target Start/End: Complemental strand, 22450546 - 22450414
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttat-ga 263  Q
    |||| ||||||||||||  ||||||||||| ||| |  ||| || |||||| |||||||||| || | |||||||||||||||||   |||||||||  |    
T  22450546 tgataataggtcatcttacgttattcttagcatgcttttcagtcgttttcattaggttttacttccagaatagaggagtattagagtaattgcttataaa 22450447  T
Q  264 tttcgggacatttgtaatgttttctatatttga 296  Q
    ||| ||||||||||| |||||||||||||||||    
T  22450446 ttttgggacatttgtgatgttttctatatttga 22450414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 379
Target Start/End: Original strand, 16242191 - 16242405
Alignment:
Q  162 tattgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttat 261  Q
    ||||||||| ||||||||||  ||||||||||| || ||  ||| ||||||| ||||| |||  ||  ||||| | |||||||||||||  ||||| |||    
T  16242191 tattgatgacaggtcatcttacgttattcttagcatatttttcactcatttttagtagttttagcagaaaaaaga-aggagtattagaacgattgcctat 16242289  T
Q  262 gatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaag 360  Q
    ||||| | ||| ||||||| ||||||  |||||||||| ||||||| || | || | |||||||||||||| ||  |  |||||||  ||||||||||||    
T  16242290 gattttgagacttttgtaaagttttc--tatttgagtc-tgtaattctagttttgccgaaacatagcaattttaggggggttttgaattaattcacgaag 16242386  T
Q  361 aaatcatgcaaatcggcaa 379  Q
    ||||||||||||| |||||    
T  16242387 aaatcatgcaaattggcaa 16242405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 375
Target Start/End: Complemental strand, 20431497 - 20431359
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattct-a 335  Q
    ||||||||||||||  ||||| ||||||||| |||| |||||||||||||||| |||||||| |||||||| || | |||| |||||||| ||||| | |    
T  20431497 gaggagtattagaacgattgcctatgatttcaggacttttgtaatgttttctaaatttgagt-atgtaattctagttttcccgaaacataacaattttaa 20431399  T
Q  336 tgatgttttgatgtaattcacgaagaaatcatgcaaatcg 375  Q
     | | |||||| |||| ||| ||||||||||||| |||||    
T  20431398 gggtattttgaagtaactcatgaagaaatcatgctaatcg 20431359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 332
Target Start/End: Original strand, 3429295 - 3429390
Alignment:
Q  236 agaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaatt 332  Q
    ||||||||||||||   ||||| |||||||||||||||| ||||||| ||| |||||||||||| ||||||| |||| |||| ||||||||| ||||    
T  3429295 agaggagtattagaggaattgcatatgatttcgggacatctgtaatgatttttatatttgagtc-tgtaattttattcttcccgaaacatagaaatt 3429390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 388
Target Start/End: Complemental strand, 23637574 - 23637486
Alignment:
Q  301 tgtaattatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    ||||||| |||| ||||||||| |||||||||||| | |||||| ||||||||||||||| |||||||| |||||| |||| |||||||    
T  23637574 tgtaattctatttttcctgaaatatagcaattctagggtgtttttgatgtaattcacgaataaatcatggaaatcgacaaatcaagaca 23637486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 384
Target Start/End: Complemental strand, 8448834 - 8448680
Alignment:
Q  230 aaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagca 329  Q
    ||||| |||||||||||| |   ||||| |||||||||| || ||||||||||||||||||||||||||  |||| || | || || | ||||||| |||    
T  8448834 aaaaacagaggagtattatagcaattgcctatgatttcgagatatttgtaatgttttctatatttgagt-ttgtatttttgttcttaccgaaacatggca 8448736  T
Q  330 attctatgatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    ||| || | || ||||||||||| | || | |||||||||||||||| ||||||||    
T  8448735 attttagggtgtttttgatgtaactaacaacgaaatcatgcaaatcgacaaagcaa 8448680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 384
Target Start/End: Original strand, 18466807 - 18466915
Alignment:
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaat 373  Q
    |||||||||||||||||  | ||||||||||||| |||| |||| ||||||||| |||| |||| |||||| |||||| | | ||| |||| ||||||||    
T  18466807 tttgtaatgttttctat--tcgagtcatgtaattttatttttcccgaaacatagaaattatatggtgttttaatgtaactaaagaaaaaataatgcaaat 18466904  T
Q  374 cggcaaagcaa 384  Q
     ||||||||||    
T  18466905 tggcaaagcaa 18466915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 19218902 - 19218832
Alignment:
Q  89 tttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaaccatat 159  Q
    ||||||||||||||||| ||||| |||| | |||||| ||||||||||||||||||| ||||||| |||||    
T  19218902 tttgcttattttccaagatggatgagtgaaaaaagcccagttttcttctcttaaaccttaagtaatcatat 19218832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 300 - 384
Target Start/End: Complemental strand, 7208485 - 7208400
Alignment:
Q  300 atgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    ||||||||||| | | || |||||||||||||||||||||| ||||||||||||| | ||| ||||||||||||| | ||||||||    
T  7208485 atgtaattatagtttacccgaaacatagcaattctatgatgtttttgatgtaatttaagaaaaaatcatgcaaattgacaaagcaa 7208400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 242 - 386
Target Start/End: Original strand, 19573652 - 19573796
Alignment:
Q  242 gtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg- 340  Q
    |||||||||  ||||| ||||||||| |||  ||||||||| |||||| ||||||||  ||||||| || | |||||||||||||||||||  | |  |     
T  19573652 gtattagaacaattgcctatgatttcaggatttttgtaatgctttctacatttgagtt-tgtaattttagttttcctgaaacatagcaatttgagggggt 19573750  T
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |||||| |||||||||||||||||||| ||||| || ||| |||||    
T  19573751 ttttgaagtaattcacgaagaaatcatacaaattggaaaatcaaga 19573796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 230 - 299
Target Start/End: Original strand, 27412724 - 27412793
Alignment:
Q  230 aaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtc 299  Q
    |||||| ||||||||||| ||  ||||| ||||||||||| || ||||||||||||||||||||||||||    
T  27412724 aaaaatggaggagtattaaaacaattgcctatgatttcggaacttttgtaatgttttctatatttgagtc 27412793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 155
Target Start/End: Original strand, 11521585 - 11521652
Alignment:
Q  88 ttttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaacc 155  Q
    |||||||| |||||||||||||| | | | ||||||||||||||||||||||||| |||| |||||||    
T  11521585 ttttgcttgttttccaagctggaccggcgaataaagcctagttttcttctcttaatccctcagtaacc 11521652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 386
Target Start/End: Original strand, 25850955 - 25851171
Alignment:
Q  172 aggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcggg 270  Q
    ||||||||||  ||||||||||| |||||  ||| | ||||| |||||| |||| || || |||  ||||||||||| ||  ||||| |||||||||  |    
T  25850955 aggtcatcttatgttattcttagcatgtttttcagttatttttagtaggatttagcagcagaaag-gaggagtattaaaacgattgcctatgatttcatg 25851053  T
Q  271 acatttgtaatgttttctatatttga--gtcatgtaattatattgttcctgaaacatagcaattctatgatgtttt--gatgtaattcacgaagaaatca 366  Q
    |  ||||||||||| |||||||||||  || ||||||||||| | |||| |||||||||| | | || | | ||||  || |||||||||||||||||||    
T  25851054 atttttgtaatgttctctatatttgaaagt-atgtaattatagt-ttcccgaaacatagccactttagggttttttttgaagtaattcacgaagaaatca 25851151  T
Q  367 tgcaaatcggcaaagcaaga 386  Q
    || ||||||||||| |||||    
T  25851152 tgtaaatcggcaaatcaaga 25851171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 386
Target Start/End: Original strand, 19170250 - 19170361
Alignment:
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaagaaatcatgcaaa 372  Q
    ||||||||||||||||||||| |||  ||||||| || | ||||||||| ||||||||| || |  ||||| || |||||||||||| |||||||||| |    
T  19170250 tttgtaatgttttctatatttaagtt-tgtaattctagttttcctgaaa-atagcaattttaaggggtttttgaagtaattcacgaaaaaatcatgcata 19170347  T
Q  373 tcggcaaagcaaga 386  Q
    ||| |||| |||||    
T  19170348 tcgacaaatcaaga 19170361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 19263594 - 19263533
Alignment:
Q  90 ttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagt 151  Q
    |||||||||||||||| ||||| |||| | |||  | |||||||||||||||||||||||||    
T  19263594 ttgcttattttccaagatggattagtggaaaaattccagttttcttctcttaaaccctaagt 19263533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 165 - 267
Target Start/End: Complemental strand, 12517387 - 12517285
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| ||||||||||  ||||||||||| || ||  ||| |||||||||||||||||||  | ||||||  ||||||||||||||  ||||| |||||    
T  12517387 tgatgacaggtcatcttacgttattcttagcatctttttcagtcattttcagtaggttttagtagcaaaaa-ggaggagtattagaatgattgcctatga 12517289  T
Q  264 tttc 267  Q
    ||||    
T  12517288 tttc 12517285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 388
Target Start/End: Original strand, 15669439 - 15669507
Alignment:
Q  320 aaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    ||||||||||||| || | ||||| | |||||||||  ||||||| |||||||||| | ||||||||||    
T  15669439 aaacatagcaattttagggtgtttcgttgtaattcaaaaagaaatgatgcaaatcgacgaagcaagaca 15669507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 21828910 - 21828846
Alignment:
Q  89 tttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaa 153  Q
    |||||||||||| |||| || ||| ||| | |||||||||||||||||||  || ||||||||||    
T  21828910 tttgcttatttttcaagatgaatcggtggaaaaagcctagttttcttctccgaacccctaagtaa 21828846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 165 - 388
Target Start/End: Complemental strand, 38388 - 38165
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| |||||| |||  | ||||||||| |||||  ||| | |||||||||||||||| |||| | ||||||||| |||||||   ||||||||||||    
T  38388 tgatgacaggtcaccttacgctattcttagcatgtttgtcagttattttcagtaggtttttcatctagaatagaggaatattagagcaattgcttatgat 38289  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaat 364  Q
    |||  |||||||||||||||||||||||||||||||||||||| | || |||| |||||||| ||||| || | ||||||||||||||||||||||||||    
T  38288 ttcaagacatttgtaatgttttctatatttgagtcatgtaattctctttttcccgaaacataacaattttagggtgttttgatgtaattcacgaagaaat 38189  T
Q  365 catgcaaatcggcaaagcaagaca 388  Q
    || ||||||||| ||| |||||||    
T  38188 cacgcaaatcggaaaaacaagaca 38165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 1e-51; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 203 - 388
Target Start/End: Original strand, 5046874 - 5047056
Alignment:
Q  203 tcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatg 302  Q
    ||||||||||||| ||| |||| |||| | ||||||||| ||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  5046874 tcaatcattttcaatagattttccatccagaatagaggattattagaataattgcttatgaattcgggacatttgtaatgttttctatatttgagttatg 5046973  T
Q  303 taattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    |||||   || |||| |||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5046974 taatt---ttcttcccgaaacatagcaattttagagtgttttgatgtaattcacgaagaaatcatgcaaatcggcaaatcaagaca 5047056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 210 - 388
Target Start/End: Original strand, 2506855 - 2507033
Alignment:
Q  210 ttttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgattt-cgggacatttgtaatgttttctatatttgagtcatgtaatta 308  Q
    ||||||||||||||| |||| | ||| ||||||||||||||  |||||||||||||| || ||||||||||||||||||||||||||||||||||||||     
T  2506855 ttttcagtaggtttt-catccagaatcgaggagtattagaacaattgcttatgattttcgagacatttgtaatgttttctatatttgagtcatgtaattc 2506953  T
Q  309 tattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    |||| ||||  |||||||| |||| || | ||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  2506954 tattattcccaaaacatagaaattttagggtgttttgatctaattcacgaagaaatcatgcaaatcagcaaagcaagaca 2507033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 165 - 394
Target Start/End: Original strand, 1254696 - 1254924
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| | ||||||||  |||||| |||| |||||  ||| ||||||||||| |||||| |||| | ||||||| | |||||| |  ||| ||||||||    
T  1254696 tgatgacaagtcatcttacgttatt-ttagcatgtttttcagtcattttcagttggtttttcatccagaatagagcaatattagcacaatttcttatgat 1254794  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaat 364  Q
    ||||||| ||||||| |||||||||||| |||| ||| |||||||| | ||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  1254795 ttcgggatatttgtagtgttttctatatgtgaggcatttaattatacttttcctgaaacatagcaattatagggtgttttgatgtaattcacgaagaaat 1254894  T
Q  365 catgcaaatcggcaaagcaagacacttgaa 394  Q
    || |||||||| |||||||||||| |||||    
T  1254895 caagcaaatcgacaaagcaagacatttgaa 1254924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 207 - 388
Target Start/End: Complemental strand, 10418612 - 10418431
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||||||||||||||||    |||| ||||||||||||||   ||||| ||||||||||| ||||||||||||||||||||||||||||| | ||||    
T  10418612 tcattttcagtaggttttactagcaaaacagaggagtattagagcaattgcctatgatttcggaacatttgtaatgttttctatatttgagtc-tataat 10418514  T
Q  307 tatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    ||| || |||| ||||||||| |||| || |||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  10418513 tatgttcttcccgaaacatagaaattttaggatgttttttatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 10418431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 233 - 388
Target Start/End: Original strand, 5221036 - 5221191
Alignment:
Q  233 aatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaatt 332  Q
    |||||||||||| |||||  ||||||||||||||||| ||||||||||||||||||||||||||||| | ||||| |||| |||  ||||||||||||||    
T  5221036 aatagaggagtactagaacaattgcttatgatttcggtacatttgtaatgttttctatatttgagtc-tataattctattcttctcgaaacatagcaatt 5221134  T
Q  333 ctatgatgttttgatgt-aattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
     || ||||||||| ||| ||||||||||||||||||||| |||||||||||||||||    
T  5221135 ttaggatgttttgttgtaaattcacgaagaaatcatgcatatcggcaaagcaagaca 5221191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 165 - 388
Target Start/End: Complemental strand, 10332501 - 10332278
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| | ||||||||  ||||||||||| |||||  ||| |||||||||||| ||||||||   | || ||||||||||||||   ||||||||| ||    
T  10332501 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcattttcagtatgttttacaagtagaaaagaggagtattagatcaattgcttatcat 10332402  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaa 363  Q
    || |||||||||||||||||||||||||| ||| | |||| || |||| |||| |||||||| |||||||| |||| ||||||||||||||| |||||||    
T  10332401 tttgggacatttgtaatgttttctatattcgag-cctgtagttctatttttcccgaaacatatcaattctaggatgtttttgatgtaattcatgaagaaa 10332303  T
Q  364 tcatgcaaatcggcaaagcaagaca 388  Q
    ||||||| ||||||||| |||||||    
T  10332302 tcatgcatatcggcaaaacaagaca 10332278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 207 - 386
Target Start/End: Complemental strand, 21502909 - 21502730
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||| ||||||||||||     ||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||||| | ||||||| ||||||    
T  21502909 tcatttttagtaggttttacgagctaaacagaggagtattagaacaattgcctatgatttcgggacatttgtaatgttttctagacttgagtc-tgtaat 21502811  T
Q  307 tatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    | |||| |||| ||||||||||||||||| | || |||||| |||||||||||||||||||||||||||| ||||||||||    
T  21502810 tctattcttcccgaaacatagcaattctagggtgtttttgaggtaattcacgaagaaatcatgcaaatcgacaaagcaaga 21502730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 175 - 386
Target Start/End: Original strand, 8052439 - 8052650
Alignment:
Q  175 tcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggaca 273  Q
    |||||||  ||||||||||| |||||  ||| ||||||||||||||||||| || ||||||| ||||||||||||||  ||||| ||||||||||| ||     
T  8052439 tcatcttacgttattcttagcatgttt-tcagtcattttcagtaggttttagcagcaaaaat-gaggagtattagaatgattgcctatgatttcggaact 8052536  T
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta--tgatgttttgatgtaattcacgaagaaatcatgcaa 371  Q
    |||||||||||||||||||||||||  ||||||| || | |||| |||||||||||||| ||   || ||||||| ||||||||||||||||||||||||    
T  8052537 tttgtaatgttttctatatttgagt-ttgtaattttagttttcccgaaacatagcaattttaggggaggttttgaagtaattcacgaagaaatcatgcaa 8052635  T
Q  372 atcggcaaagcaaga 386  Q
    |||| |||| |||||    
T  8052636 atcgacaaatcaaga 8052650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 185 - 388
Target Start/End: Complemental strand, 20176170 - 20175968
Alignment:
Q  185 ttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgtt 284  Q
    |||||||||| |||||   || |||||||||||| ||||| |||| | | |||  ||||||||||   |||||||||||||| |||||||||||||| ||    
T  20176170 ttattcttagcatgttttccagtcattttcagtatgtttttcatctagagtagcagagtattagattaattgcttatgattttgggacatttgtaat-tt 20176072  T
Q  285 ttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    |||||||||| | |||||||||| || | |||| |||||| |||||||||| | ||||||||||||||||| ||||||||  ||||||||||||||||||    
T  20176071 ttctatattttattcatgtaattctaattttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaatcggcaaagcaa 20175972  T
Q  385 gaca 388  Q
    ||||    
T  20175971 gaca 20175968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 257 - 388
Target Start/End: Complemental strand, 9722456 - 9722325
Alignment:
Q  257 cttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcac 356  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||  ||||||||||||| || | |||||||||||||| |||    
T  9722456 cttatgatttcgggacatttgttatgttttctatatttgagtcatataataatattcttccaaaaacatagcaattatagggtgttttgatgtaatccac 9722357  T
Q  357 gaagaaatcatgcaaatcggcaaagcaagaca 388  Q
     |||||||||||||||||| |||||| |||||    
T  9722356 aaagaaatcatgcaaatcgacaaagctagaca 9722325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 164 - 380
Target Start/End: Original strand, 26249074 - 26249290
Alignment:
Q  164 ttgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatg 262  Q
    ||||||| ||||||||||  ||||||| ||| |||||  ||| ||||||||||||||||||| || ||||||  || |||||||||||  |||| |||||    
T  26249074 ttgatgacaggtcatcttacgttattcatagcatgtttttcagtcattttcagtaggttttagcagcaaaaag-gatgagtattagaacaattgtttatg 26249172  T
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaaga 361  Q
    ||||| |||  |||||||||||||||||||||||||  ||||||| || | ||||| ||||||||||||| || |  ||||| || ||||||||||||||    
T  26249173 atttcaggatttttgtaatgttttctatatttgagtt-tgtaattctagttttcctaaaacatagcaattttagggggtttttgaagtaattcacgaaga 26249271  T
Q  362 aatcatgcaaatcggcaaa 380  Q
    |||||||||||||||||||    
T  26249272 aatcatgcaaatcggcaaa 26249290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 165 - 378
Target Start/End: Original strand, 9078881 - 9079095
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcat-caatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatg 262  Q
    |||||| | ||||||||  ||||||||||| |||||  | || | ||||||||||||||| | || ||||||  |||||||||| |||  ||||  ||||    
T  9078881 tgatgacatgtcatcttacgttattcttagcatgttttttcagttattttcagtaggtttcagcagcaaaaag-gaggagtattggaacgattgtctatg 9078979  T
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaaga 361  Q
    ||||| |||| |||||||||||||||||||||||||  |||||||||| | |||| |||||||||||||| ||||| | |||||| ||||||||||||||    
T  9078980 atttcaggacttttgtaatgttttctatatttgagt-ttgtaattatagttttcccgaaacatagcaattatatgaggtttttgaagtaattcacgaaga 9079078  T
Q  362 aatcatgcaaatcggca 378  Q
    |||||||||||||||||    
T  9079079 aatcatgcaaatcggca 9079095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 165 - 386
Target Start/End: Complemental strand, 2927971 - 2927750
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttac-atcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| ||||||||||  ||||||||||| |||||  ||| |   ||| |||||| ||||  | ||||||| ||||||||||||||| ||| | |||||    
T  2927971 tgatgacaggtcatcttacgttattcttagcatgtttttcagtttattttagtaggatttagtagcaaaaat-gaggagtattagaaagattacctatga 2927873  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaagaa 362  Q
    ||||||||  |||||||||||||||||||||||||  | ||||| || | ||||||||||||||||||| || ||  ||||||| |||||||||||||||    
T  2927872 tttcgggatttttgtaatgttttctatatttgagt-ttataattctagttttcctgaaacatagcaattttagtggggttttgaagtaattcacgaagaa 2927774  T
Q  363 atcatgcaaatcggcaaagcaaga 386  Q
    |||| ||||||||||||| |||||    
T  2927773 atcacgcaaatcggcaaatcaaga 2927750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 165 - 394
Target Start/End: Complemental strand, 6018455 - 6018225
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||||| ||||||||  |||||| |||| |||||  ||| ||  ||| ||||||||||||    |||| ||||||||||||||   ||||| ||||||    
T  6018455 tgatgatatgtcatcttatgttatttttagcatgtttttcagtcgattttagtaggttttaccaacaaaacagaggagtattagattaattgcctatgat 6018356  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgat-gttttgatgtaattcacgaagaaa 363  Q
    ||  ||||||||||| ||||||||||||||||| |||||||||||||| ||||  ||||||| ||||| || | |  |||||||||||||||||||||||    
T  6018355 tttaggacatttgtattgttttctatatttgag-catgtaattatatttttcccaaaacataacaattttagggtatttttgatgtaattcacgaagaaa 6018257  T
Q  364 tcatgcaaatc-ggcaaagcaagacacttgaa 394  Q
    ||| ||||||| ||||||| |||||| |||||    
T  6018256 tcaagcaaatcaggcaaagtaagacatttgaa 6018225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 165 - 371
Target Start/End: Complemental strand, 9767882 - 9767676
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| |||||||||   ||||||||||| |||||  |||  |||||||||||||||||||   ||||||||||||||||||||   ||||| ||||||    
T  9767882 tgatgacaggtcatctcacgttattcttagcatgtttttcagccattttcagtaggttttaccagaaaaatagaggagtattagatcaattgcctatgat 9767783  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaa 363  Q
    |||| ||||||| || ||||||||||||||||||| ||||||| |||| |||  |||| ||||||| | || | |||| || ||||||||||||||||||    
T  9767782 ttcgagacatttatattgttttctatatttgagtc-tgtaattctattcttctcgaaatatagcaactttagggtgttcttaatgtaattcacgaagaaa 9767684  T
Q  364 tcatgcaa 371  Q
    ||| ||||    
T  9767683 tcaagcaa 9767676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 233 - 388
Target Start/End: Original strand, 15611107 - 15611261
Alignment:
Q  233 aatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaatt 332  Q
    ||||||||||||||||| | ||| ||||||||||||||||| || ||||||||| |||||||||| | ||||||| |||| |||| |||||||||||| |    
T  15611107 aatagaggagtattagataaatttcttatgatttcgggacagttttaatgttttttatatttgag-cttgtaattctattcttcccgaaacatagcaaat 15611205  T
Q  333 ctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
     ||   ||||||| |||||||||||||||||||||||| || ||||||| ||||||    
T  15611206 ttagagtgttttgttgtaattcacgaagaaatcatgcatattggcaaagaaagaca 15611261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 207 - 380
Target Start/End: Complemental strand, 145031 - 144859
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||| ||||||||||||    ||||  || ||||||||||   ||||| ||||||||||||| |||| ||||||||||||||||||||| |||||||    
T  145031 tcatttttagtaggttttaccagcaaaacggatgagtattagagcaattgcctatgatttcggga-atttataatgttttctatatttgagt-atgtaat 144934  T
Q  307 tatattgttcctgaaacatagcaattctatgatgttttg-atgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    ||| || |||| |||||||||||||| || ||||||||  |||||||||||||| ||||||||||||||||||||    
T  144933 tatgttcttcccgaaacatagcaattgtaggatgttttttatgtaattcacgaacaaatcatgcaaatcggcaaa 144859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 174 - 386
Target Start/End: Original strand, 5236875 - 5237087
Alignment:
Q  174 gtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggac 272  Q
    ||||||||  ||||||||||| |||||  ||| | ||||||||||||||||| || ||||||  |||||| |||||||  ||| | |||||||| |||||    
T  5236875 gtcatcttacgttattcttagcatgtttttcagttattttcagtaggttttagcagcaaaaag-gaggaggattagaacaatttcctatgattttgggac 5236973  T
Q  273 atttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaagaaatcatgcaa 371  Q
     ||||||||||||||| |||||||||| ||||||| || | |||| | |||||||||||| ||  |  ||||||| ||||||||||||||||||||||||    
T  5236974 ttttgtaatgttttctgtatttgagtc-tgtaattctagttttcccgtaacatagcaattttaggggggttttgaagtaattcacgaagaaatcatgcaa 5237072  T
Q  372 atcggcaaagcaaga 386  Q
    ||||||||| |||||    
T  5237073 atcggcaaatcaaga 5237087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 165 - 386
Target Start/End: Complemental strand, 11804795 - 11804575
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| || |||||||  ||||||| ||  |||||  ||| ||||||||||||||||||| || ||||||  ||| ||||||||||  ||||| |||||    
T  11804795 tgatgacagatcatcttacgttattcataacatgtttttcagtcattttcagtaggttttagcagcaaaaag-gagcagtattagaacgattgcctatga 11804697  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaa 363  Q
    |||| |||| ||||||||||||||||||||||||| |||||||| || | |||| |||||||||||||| |  |   |||||| | ||||||||||||||    
T  11804696 tttcaggacttttgtaatgttttctatatttgagt-atgtaattctagttttcccgaaacatagcaattttgggggtttttgaagaaattcacgaagaaa 11804598  T
Q  364 tcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||| |||| |||||    
T  11804597 tcatgcaaatcgacaaatcaaga 11804575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 164 - 374
Target Start/End: Complemental strand, 1589338 - 1589127
Alignment:
Q  164 ttgatgataggtcatcttgagttattcttagtatgttcatcaatcatttt-cagtaggttttacatcaaaaatagaggagtattagaaacattgcttatg 262  Q
    ||||||| ||||||||||  | ||||||||| |||||  |||  |||||| ||||||||||||  |  ||| |||||||||||||||   ||||| ||||    
T  1589338 ttgatgacaggtcatcttatgctattcttagcatgtttttcagccatttttcagtaggttttatctgcaaagtagaggagtattagattaattgcatatg 1589239  T
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaaga 361  Q
    |||||  |||||||||| |||| ||||||||||||| |||||||| |||| |||| |||| ||||||||| || | |||| |||||||||||||||||||    
T  1589238 atttcaagacatttgtattgttgtctatatttgagt-atgtaattctattcttcccgaaatatagcaattttagggtgttcttgatgtaattcacgaaga 1589140  T
Q  362 aatcatgcaaatc 374  Q
    ||||| |||||||    
T  1589139 aatcaagcaaatc 1589127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 241 - 394
Target Start/End: Original strand, 5471810 - 5471959
Alignment:
Q  241 agtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg 340  Q
    ||||||||||  ||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||| |||  ||   ||||||||| || | |     
T  5471810 agtattagaacaattgcttataatttcgggatatttgtaatgttttctatatttgagtc-tgtaattatattcttctcga---atagcaattttagggtc 5471905  T
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagacacttgaa 394  Q
    |||| | |||||||| |||||||||||||||||||||||||||| |||| ||||    
T  5471906 ttttaaagtaattcaagaagaaatcatgcaaatcggcaaagcaatacacctgaa 5471959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 237 - 386
Target Start/End: Original strand, 8317513 - 8317662
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    ||||||||||||||  ||||| |||||||||||||| |||||||||||||||||||||||||| ||||||| || | || | ||||||||||||||  |     
T  8317513 gaggagtattagaacgattgcctatgatttcgggacttttgtaatgttttctatatttgagtc-tgtaattctagtttttccgaaacatagcaatttgag 8317611  T
Q  337 gatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    | || |||||| ||||||||||||||||||||||||| ||| ||| |||||    
T  8317612 ggtgtttttgaagtaattcacgaagaaatcatgcaaaccggaaaatcaaga 8317662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 380
Target Start/End: Complemental strand, 20577535 - 20577386
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    ||||| ||||||||||||||  ||||| |||||||||| ||| |||||||||||||||||||||||| | ||||||| || | |||| ||||||||||||    
T  20577535 aaaattgaggagtattagaacgattgcctatgatttcgagacttttgtaatgttttctatatttgag-cctgtaattctagtattcccgaaacatagcaa 20577437  T
Q  331 ttcta-tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    ||  |  |  ||||||| |||||||||||||||||||||||||||||||||    
T  20577436 tttgaggggggttttgaagtaattcacgaagaaatcatgcaaatcggcaaa 20577386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 185 - 386
Target Start/End: Original strand, 3585542 - 3585744
Alignment:
Q  185 ttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    |||||||||| |||||  ||||||||||||||||||||||| || ||||| | ||||||||||| ||  ||||| |||||||||| ||| ||| ||||||    
T  3585542 ttattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaa-tggaggagtattaaaatgattgcctatgatttcgtgacttttataatgt 3585640  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta--tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaag 381  Q
    |||||||||||||||| ||||||| || | || | |||||||||||||| ||   | | |||| | ||| ||||||||||||||||||||||||| |||     
T  3585641 tttctatatttgagtc-tgtaattctagtttttccgaaacatagcaattttaggggttttttttaagtatttcacgaagaaatcatgcaaatcggaaaat 3585739  T
Q  382 caaga 386  Q
    |||||    
T  3585740 caaga 3585744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 165 - 386
Target Start/End: Complemental strand, 4450768 - 4450546
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| || |||||||  ||||||||||| |||||   || ||||||||||||||||||| || ||||| | ||||||||||||||  ||||| | |||    
T  4450768 tgatgacagatcatcttacgttattcttagcatgttttccagtcattttcagtaggttttagcaacaaaa-tggaggagtattagaacgattgcctgtga 4450670  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgta-attcacgaaga 361  Q
    ||||||||| |||||||||||||||||||||||| | | ||||| || | ||||  ||||||||||||| || |  | ||||||||||  ||||||||||    
T  4450669 tttcgggacttttgtaatgttttctatatttgagac-tataattctagttttcccaaaacatagcaattttagggggtttttgatgtagtttcacgaaga 4450571  T
Q  362 aatcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||||| |||| |||||    
T  4450570 aatcatgcaaatcgacaaatcaaga 4450546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 231 - 386
Target Start/End: Complemental strand, 9978316 - 9978161
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    ||||| ||||||||||||||   |||| |||||||| ||||| |||||||||||||||||||||||||| ||||||| || | || ||||||||||||||    
T  9978316 aaaatggaggagtattagaacggttgcctatgattttgggacttttgtaatgttttctatatttgagtc-tgtaattctagtttttctgaaacatagcaa 9978218  T
Q  331 ttcta-tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    ||  |  |  ||||| | ||||||||||||||||||||||||||||||||| |||||    
T  9978217 tttgaggggggttttaaagtaattcacgaagaaatcatgcaaatcggcaaatcaaga 9978161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 163 - 374
Target Start/End: Complemental strand, 1811003 - 1810793
Alignment:
Q  163 attgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatg 262  Q
    |||||||| | ||||||||  ||||||| ||| |||||  ||| ||||||| |||| |||||||||| | |||||| ||||||||||   |||||||||     
T  1811003 attgatgacatgtcatcttacgttattcgtagcatgtttttcagtcattttaagtaagttttacatccagaatagatgagtattagattaattgcttatt 1810904  T
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaa 362  Q
    |||| |||| ||||||| | |||||||||||||||| |||||||| |||| |||| ||||||||  | || || | || ||||| || |||||| |||||    
T  1810903 attttgggatatttgtattattttctatatttgagt-atgtaattctattcttcccgaaacatataatttttagggtggtttgacgtcattcacaaagaa 1810805  T
Q  363 atcatgcaaatc 374  Q
    ||||||||||||    
T  1810804 atcatgcaaatc 1810793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 174 - 332
Target Start/End: Original strand, 8977479 - 8977636
Alignment:
Q  174 gtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggac 272  Q
    ||||||||  ||||||||||| || ||  ||||||||||||||||||||||| || ||||||  ||||||||||||||  | ||| ||||||||| ||||    
T  8977479 gtcatcttacgttattcttagcatctttttcaatcattttcagtaggttttagcagcaaaaag-gaggagtattagaacaactgcctatgatttcaggac 8977577  T
Q  273 atttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaatt 332  Q
     |||||||||||||||||||||||||| ||||||| || | |||| ||||||||||||||    
T  8977578 ttttgtaatgttttctatatttgagtc-tgtaattctaattttcccgaaacatagcaatt 8977636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 241 - 386
Target Start/End: Complemental strand, 9288931 - 9288786
Alignment:
Q  241 agtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg 340  Q
    ||||||||||  ||||  |||||||| | |||| |||||||||||||||||||||| | |||||||| |||| ||| ||||||||||||||| || |||     
T  9288931 agtattagaacaattgtctatgattttgtgacacttgtaatgttttctatatttgatt-atgtaattctattcttcttgaaacatagcaattttaggatt 9288833  T
Q  341 tttt-gatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |||| |||||||||| |||||||||||||||||||| ||||| ||||    
T  9288832 tttttgatgtaattcgcgaagaaatcatgcaaatcgtcaaagtaaga 9288786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 241 - 386
Target Start/End: Complemental strand, 9298723 - 9298578
Alignment:
Q  241 agtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg 340  Q
    ||||||||||  ||||  |||||||| | |||| |||||||||||||||||||||| | |||||||| |||| ||| ||||||||||||||| || |||     
T  9298723 agtattagaacaattgtctatgattttgtgacacttgtaatgttttctatatttgatt-atgtaattctattcttcttgaaacatagcaattttaggatt 9298625  T
Q  341 tttt-gatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |||| |||||||||| |||||||||||||||||||| ||||| ||||    
T  9298624 tttttgatgtaattcgcgaagaaatcatgcaaatcgtcaaagtaaga 9298578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 237 - 386
Target Start/End: Complemental strand, 20597625 - 20597476
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    ||||||||||||||  ||| ||||||||||| |||| ||||| |||||||||||||||||||| ||||||| || | |||| |||||||||||||| ||     
T  20597625 gaggagtattagaacaattacttatgatttcaggacttttgttatgttttctatatttgagtc-tgtaattctagttttcccgaaacatagcaattttag 20597527  T
Q  337 gatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |  | |||||| |||| |||||||||||||||||||||| ||||| |||||    
T  20597526 ggggtttttgaagtaagtcacgaagaaatcatgcaaatcagcaaaccaaga 20597476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 175 - 386
Target Start/End: Original strand, 18986754 - 18986965
Alignment:
Q  175 tcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggaca 273  Q
    |||||||  ||||||||||| |||||  ||| ||| ||||||||| ||||| || ||||||  ||||||||||||||  | ||| ||||||||| ||||     
T  18986754 tcatcttacgttattcttagcatgtttttcagtcaatttcagtagattttagcagcaaaaag-gaggagtattagaacgactgcctatgatttcaggact 18986852  T
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagc-aattctatgatgttttgatgtaattcacgaagaaatcatgcaaa 372  Q
    |||||||| ||||||||||||||||  ||||||| || | ||| ||||||||||| | || || |   |||||| |||||||||||||||||||||||||    
T  18986853 tttgtaatattttctatatttgagt-ttgtaattctagttttcttgaaacatagctatttgtaggggtttttgaagtaattcacgaagaaatcatgcaaa 18986951  T
Q  373 tcggcaaagcaaga 386  Q
    |||||||| |||||    
T  18986952 tcggcaaatcaaga 18986965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 175 - 386
Target Start/End: Original strand, 19001382 - 19001593
Alignment:
Q  175 tcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggaca 273  Q
    |||||||  ||||||||||| |||||  ||| ||| ||||||||| ||||| || ||||||  ||||||||||||||  | ||| ||||||||| ||||     
T  19001382 tcatcttacgttattcttagcatgtttttcagtcaatttcagtagattttagcagcaaaaag-gaggagtattagaacgactgcctatgatttcaggact 19001480  T
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagc-aattctatgatgttttgatgtaattcacgaagaaatcatgcaaa 372  Q
    |||||||| ||||||||||||||||  ||||||| || | ||| ||||||||||| | || || |   |||||| |||||||||||||||||||||||||    
T  19001481 tttgtaatattttctatatttgagt-ttgtaattctagttttcttgaaacatagctatttgtaggggtttttgaagtaattcacgaagaaatcatgcaaa 19001579  T
Q  373 tcggcaaagcaaga 386  Q
    |||||||| |||||    
T  19001580 tcggcaaatcaaga 19001593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 207 - 394
Target Start/End: Complemental strand, 9918222 - 9918035
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    |||||||||||| |||| ||||| |||||||||| ||||||||   |||| |||||| ||||||| ||||||||||||||||||||||||||| | ||||    
T  9918222 tcattttcagtaagtttaacatccaaaatagaggggtattagagcaattgtttatgacttcgggagatttgtaatgttttctatatttgagtc-tctaat 9918124  T
Q  307 tatattgttcctgaaacatagcaattctatgatgttttgatgt-aattcacgaagaaatcatgcaaatcggcaaagcaagacacttgaa 394  Q
     ||||| |||| |||| ||||||||| |  | | |||  | ||   || |||||||||||||||||| ||||||||||||||| |||||    
T  9918123 catattcttcccgaaatatagcaatttttgggtatttctaggtgttttaacgaagaaatcatgcaaaccggcaaagcaagacatttgaa 9918035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 207 - 394
Target Start/End: Complemental strand, 9926134 - 9925947
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    |||||||||||| |||| ||||| |||||||||| ||||||||   |||| |||||| ||||||| ||||||||||||||||||||||||||| | ||||    
T  9926134 tcattttcagtaagtttaacatccaaaatagaggggtattagagcaattgtttatgacttcgggagatttgtaatgttttctatatttgagtc-tctaat 9926036  T
Q  307 tatattgttcctgaaacatagcaattctatgatgttttgatgt-aattcacgaagaaatcatgcaaatcggcaaagcaagacacttgaa 394  Q
     ||||| |||| |||| ||||||||| |  | | |||  | ||   || |||||||||||||||||| ||||||||||||||| |||||    
T  9926035 catattcttcccgaaatatagcaatttttgggtatttctaggtgttttaacgaagaaatcatgcaaaccggcaaagcaagacatttgaa 9925947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 237 - 388
Target Start/End: Original strand, 15170836 - 15170986
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    ||||||||||| | | ||||| | ||||||| |||||||||||||||||||||||||||| || | ||||| | || ||||  ||| |||| |||| ||     
T  15170836 gaggagtattaaataaattgcatgtgatttcaggacatttgtaatgttttctatatttga-tctt-taattttgttcttcccaaaatatagtaattttag 15170933  T
Q  337 gatgttttg-atgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  15170934 gatgttttggatgtaattcacgaagaaatcatgtaaatcggcaaagcaagaca 15170986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 165 - 386
Target Start/End: Complemental strand, 6046624 - 6046403
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||||| ||||||||  ||||||||||  |||||  | | |||||||||||| ||| || || | ||||  |||||||||| |||  ||||| |||||    
T  6046624 tgatgataagtcatcttatgttattcttaacatgttttttagtcattttcagtaagttgtagcagctaaaag-gaggagtatttgaattattgcctatga 6046526  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaagaa 362  Q
    ||| ||||| |||||||||||||||||||||||||| ||||||| || | |||| |||||||  ||||| ||  | | |||||| |||||||||||||||    
T  6046525 ttttgggacttttgtaatgttttctatatttgagtc-tgtaattctagttttcccgaaacatgacaattttaggggttttttgaagtaattcacgaagaa 6046427  T
Q  363 atcatgcaaatcggcaaagcaaga 386  Q
    ||||||||||||| |||| |||||    
T  6046426 atcatgcaaatcgacaaatcaaga 6046403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 174 - 344
Target Start/End: Original strand, 21707346 - 21707516
Alignment:
Q  174 gtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtatt-agaaacattgcttatgatttcgggac 272  Q
    ||||||||  ||||||||||| || ||  ||||||||||| ||||||||||||    | || ||| ||||||| ||||  ||||| ||||| |||| |||    
T  21707346 gtcatcttacgttattcttagcatatttttcaatcatttttagtaggttttaccagtataacagaagagtatttagaacaattgcctatgagttcgagac 21707445  T
Q  273 atttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtttt 344  Q
    |||||||||||||||||||||||| || ||||||| |||| |||||||||||||||||||||| | ||||||    
T  21707446 atttgtaatgttttctatatttgaatc-tgtaattctattcttcctgaaacatagcaattctagggtgtttt 21707516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 236 - 366
Target Start/End: Original strand, 23127965 - 23128095
Alignment:
Q  236 agaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta 335  Q
    ||||||||||||||   |||||||||||||| || |||||||||| |||||||||||| ||||| |||||||  ||| |||| |||||||||||||| ||    
T  23127965 agaggagtattagatcaattgcttatgattttggaacatttgtaaggttttctatattcgagtc-tgtaattccattcttcccgaaacatagcaatttta 23128063  T
Q  336 tgatgtt-ttgatgtaattcacgaagaaatca 366  Q
     | |||| ||||||||||||||||||||||||    
T  23128064 gggtgttcttgatgtaattcacgaagaaatca 23128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 210 - 388
Target Start/End: Complemental strand, 5485685 - 5485499
Alignment:
Q  210 ttttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttct--------atatttgagtcat 301  Q
    ||||||||||||||||||   | |||||||||||||||||   |||||||||||||||  ||||||| ||||||||| |        |||||||||| ||    
T  5485685 ttttcagtaggttttacaagcagaatagaggagtattagatcaattgcttatgatttcaagacatttataatgttttttttttatatatatttgagt-at 5485587  T
Q  302 gtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaa-ttcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    |||||| | || ||||||||||||| ||||| || ||||||||| ||||| |||||||||||| |||||| |||||| ||||||||||    
T  5485586 gtaattctgttcttcctgaaacatatcaattttaggatgttttgttgtaaattcacgaagaaaacatgcatatcggcgaagcaagaca 5485499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 386
Target Start/End: Complemental strand, 9134796 - 9134684
Alignment:
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaa 372  Q
    |||||||| |||||||||||||||| ||||||||||| | |||| |||||||||||||| || ||| || |||| ||||||||||||||||||||| |||    
T  9134796 tttgtaattttttctatatttgagt-atgtaattatagttttcccgaaacatagcaattttaggattttattgaagtaattcacgaagaaatcatgtaaa 9134698  T
Q  373 tcggcaaagcaaga 386  Q
    |||||||| |||||    
T  9134697 tcggcaaatcaaga 9134684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 274 - 394
Target Start/End: Original strand, 24751309 - 24751426
Alignment:
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaat 373  Q
    |||||||| ||||||||||| ||||||||||||| |||| ||||  ||||||  |||||||| | ||||||||||||||||||||||||| |||||||||    
T  24751309 tttgtaatcttttctatatt-gagtcatgtaattctatttttccaaaaacat--caattctagggtgttttgatgtaattcacgaagaaaccatgcaaat 24751405  T
Q  374 cggcaaagcaagacacttgaa 394  Q
    || |||||||| ||| |||||    
T  24751406 cgacaaagcaaaacatttgaa 24751426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 381
Target Start/End: Original strand, 6039400 - 6039513
Alignment:
Q  268 gggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatca 366  Q
    ||||||||||||| |||||||||||||||||| ||||||||| || |||| |||| |||| |||| || |||| ||||||||||||||||||| || |||    
T  6039400 gggacatttgtaaagttttctatatttgagtc-tgtaattatgttcttcccgaaagatagaaattttaggatgattttgatgtaattcacgaaaaactca 6039498  T
Q  367 tgcaaatcggcaaag 381  Q
    |||| ||||||||||    
T  6039499 tgcatatcggcaaag 6039513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 394
Target Start/End: Original strand, 10414276 - 10414507
Alignment:
Q  162 tattgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttat 261  Q
    ||||||||| ||||||||||   |||||||||| |||||  ||  | |||||||||  ||||| |||||| |||| |||||||||||||  | | | |||    
T  10414276 tattgatgacaggtcatcttacattattcttagcatgtttttcggttattttcagttagtttt-catcaagaataaaggagtattagaagaaattcctat 10414374  T
Q  262 -gatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaaca-tagcaattctatgatgttttgatgtaattcacgaa 359  Q
     | |||||||||||||||||||||| |||| || ||||| |||||||||| | ||||| ||| | |||||||||||   ||||||||| ||||||| |||    
T  10414375 agttttcgggacatttgtaatgttt-ctatgtt-gagtcgtgtaattatagttttcctaaaaaaatagcaattctagagtgttttgatataattcaagaa 10414472  T
Q  360 gaaatcatgcaaatcggcaaagcaagacacttgaa 394  Q
    |||||||||||||||| |||| ||| ||| |||||    
T  10414473 gaaatcatgcaaatcgacaaaacaaaacatttgaa 10414507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 379
Target Start/End: Complemental strand, 10611800 - 10611596
Alignment:
Q  175 tcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggaca 273  Q
    |||||||| ||||||||||| |||||  ||| | ||||| | ||||||||| || ||||||  || |||||||||||  ||||| ||||||| ||||||     
T  10611800 tcatcttgcgttattcttagcatgtttctcagtgattttaaataggttttagcagcaaaaag-gatgagtattagaacgattgcctatgattacgggact 10611702  T
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaagaaatcatgcaaa 372  Q
    |||||||||||||||||||||||||| | ||||| || | ||||  ||||||||||||| ||  | | |||||| ||||| |||||| |||| |||||||    
T  10611701 tttgtaatgttttctatatttgagtc-tctaattctagttttccctaaacatagcaattttaggggttttttgaagtaatccacgaaaaaattatgcaaa 10611603  T
Q  373 tcggcaa 379  Q
    |||||||    
T  10611602 tcggcaa 10611596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 277 - 393
Target Start/End: Complemental strand, 8039004 - 8038888
Alignment:
Q  277 gtaatgttttctatatttgagtcatgtaattata-ttgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcg 375  Q
    ||||||||||||||||| || |||||||||| || || |||||||||||||||||||||| | |||||||||||||||||  |||||||||| |||||||    
T  8039004 gtaatgttttctatatt-gattcatgtaattctagtttttcctgaaacatagcaattctagggtgttttgatgtaattcaaaaagaaatcatccaaatcg 8038906  T
Q  376 gcaaagcaagacacttga 393  Q
     |||| ||| ||| ||||    
T  8038905 acaaaacaaaacatttga 8038888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 236 - 388
Target Start/End: Complemental strand, 21234129 - 21233977
Alignment:
Q  236 agaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta 335  Q
    |||||||||||||| |  |||  |||||||  |||||||||||||||||||||||||||||||  | ||||| |||| ||||  ||| ||||||| | ||    
T  21234129 agaggagtattagagaatttgtctatgattctgggacatttgtaatgttttctatatttgagt-ttataattctattcttcccaaaatatagcaaattta 21234031  T
Q  336 tgatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
     |||| ||||||||||| ||||| |||||||||||| ||||| |||||||||||    
T  21234030 ggatgtttttgatgtaactcacggagaaatcatgcatatcggaaaagcaagaca 21233977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 388
Target Start/End: Complemental strand, 1586222 - 1586067
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    |||||||||||| ||||||   ||||  ||||||||| |||||||||||||||||||| ||||||||| ||||||| | | |  | |  ||||||| ||     
T  1586222 aaaatagaggagcattagagcaattgtctatgatttcaggacatttgtaatgttttctttatttgagt-atgtaatcagagttatac--aaacatatcag 1586126  T
Q  331 ttctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    || |||| |||| |||| ||||||||||||||||||||||||||||||||| |||||||    
T  1586125 ttttatggtgttcttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaagaca 1586067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 165 - 299
Target Start/End: Complemental strand, 13280856 - 13280722
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| | ||||||||  ||||||||||| |||||  ||||| | ||||||||||||||| || |||||| | | |||||||||||  ||||| |||||    
T  13280856 tgatgacatgtcatcttacgttattcttagcatgtttttcaattaatttcagtaggttttagcagcaaaaaga-acgagtattagaatgattgcctatga 13280758  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtc 299  Q
    ||||||||| ||||||||||||||| ||||||||||    
T  13280757 tttcgggacttttgtaatgttttctttatttgagtc 13280722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 165 - 388
Target Start/End: Complemental strand, 3736433 - 3736212
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||| ||||||||||||  ||||||||||| |||||  | | ||  ||||||||||||||||    |||  | |||| |||||||   ||||| ||||||    
T  3736433 tgattataggtcatcttacgttattcttagcatgttttttagtctatttcagtaggttttaccagcaaagcataggattattagatcaattgcctatgat 3736334  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaa 363  Q
    |||| |||||||||||| |||||||||||||||| |||||||| |||| |||  |||||  ||||||| || | |||| |||||||||||||| ||||||    
T  3736333 ttcgagacatttgtaat-ttttctatatttgagt-atgtaattctatttttctcgaaac--agcaattttagggtgttattgatgtaattcacaaagaaa 3736238  T
Q  364 tcatgcaaatc-ggcaaagcaagaca 388  Q
    |||  |||||| ||||||||||||||    
T  3736237 tcaatcaaatcaggcaaagcaagaca 3736212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 157 - 298
Target Start/End: Complemental strand, 3173815 - 3173674
Alignment:
Q  157 tatgttattgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattg 256  Q
    ||||| |||||||| || |||||||| ||||||||||| |||||  ||| ||||||||| ||||||| |     |||   ||||||||||||||| ||||    
T  3173815 tatgtcattgatgacagatcatcttgcgttattcttagcatgtttttcagtcattttcattaggtttcagcagtaaatgggaggagtattagaaagattg 3173716  T
Q  257 cttatgatttcgggacatttgtaatgttttctatatttgagt 298  Q
    | |||||||| ||||| |||||||| ||||||||||||||||    
T  3173715 cctatgattttgggacttttgtaatattttctatatttgagt 3173674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 210 - 386
Target Start/End: Complemental strand, 25692842 - 25692665
Alignment:
Q  210 ttttcagtaggttttaca--tcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaatt 307  Q
    |||||||||||||||| |  | ||||||| |||||||||||||  ||||  |||||| |||| || |||||||| ||||||||||||||||| |||||||    
T  25692842 ttttcagtaggttttagaagtaaaaaata-aggagtattagaacgattgtctatgatatcggaacttttgtaatattttctatatttgagtc-tgtaatt 25692745  T
Q  308 atattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
     || | |||| ||||||||  |||| || |||| ||||||  ||||||| ||||||||||| ||||| |||||| |||||    
T  25692744 ctagttttcccgaaacataataattttaggatgtttttgaaataattcaagaagaaatcattcaaattggcaaatcaaga 25692665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 384
Target Start/End: Complemental strand, 2455336 - 2455223
Alignment:
Q  268 gggacatttgtaatgttttctatatttgagtcatgtaattata-ttgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatca 366  Q
    |||||||||||||||||||||||  ||||||||||||||| || || |||  |||||| |||||||||| | ||||| ||||||||| | ||||||||||    
T  2455336 gggacatttgtaatgttttctat--ttgagtcatgtaattctagtttttcgcgaaacaaagcaattctagg-tgttt-gatgtaatttaagaagaaatca 2455241  T
Q  367 tgcaaatcggcaaagcaa 384  Q
     |||||||||||||||||    
T  2455240 cgcaaatcggcaaagcaa 2455223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 386
Target Start/End: Original strand, 4900397 - 4900551
Alignment:
Q  233 aatagaggagtattagaaacattgcttatgatttcgggacattt-gtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaat 331  Q
    |||||| ||||||||||   ||||| || ||||||| ||||||| ||||  ||||||||||||| ||||||||||  || | ||||  ||||||||||||    
T  4900397 aatagaagagtattagatcaattgcatacgatttcgagacatttcgtaaaattttctatatttgtgtcatgtaatcctacttttccctaaacatagcaat 4900496  T
Q  332 tctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    | || | ||||||||  |||||  |||||||||||||||||| | ||||||||||    
T  4900497 tatagggtgttttgacctaattaccgaagaaatcatgcaaattgacaaagcaaga 4900551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 2505811 - 2505724
Alignment:
Q  295 gagtcatgtaattatattgttcctgaaacatagcaattctatga-tgttttgatgtaattcacgaagaaatcatgcaaatcggcaaag 381  Q
    ||||||||||||| || | |||| |||||||||||||| || |  ||||||||||||||||| ||||||||||||||||||| |||||    
T  2505811 gagtcatgtaattctagttttcccgaaacatagcaattttaagggtgttttgatgtaattcaagaagaaatcatgcaaatcgtcaaag 2505724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 240 - 386
Target Start/End: Original strand, 13287785 - 13287931
Alignment:
Q  240 gagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tga 338  Q
    |||||||||||  ||||| ||||||||| |||| |||||||| ||||||||||||||||  ||||||| || | |||| ||||||||||||||  |  |     
T  13287785 gagtattagaacgattgcctatgatttcaggacttttgtaatattttctatatttgagt-ttgtaattctagttttcccgaaacatagcaatttgagggg 13287883  T
Q  339 tgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    | |||| | |||||| |||||||| |||| |||||||||||| |||||    
T  13287884 tttttttaagtaattgacgaagaagtcattcaaatcggcaaatcaaga 13287931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 381
Target Start/End: Complemental strand, 7399328 - 7399219
Alignment:
Q  272 catttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaagaaatcatgca 370  Q
    |||||||||  ||||||||||||||||  | |||||||||| ||||  |||||||| |||| || | |||||| ||||||||| |||| |||||||||||    
T  7399328 catttgtaacattttctatatttgagtttt-taattatattcttcccaaaacatagtaattttagggtgtttttgatgtaattaacgacgaaatcatgca 7399230  T
Q  371 aatcggcaaag 381  Q
    |||||||||||    
T  7399229 aatcggcaaag 7399219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 386
Target Start/End: Original strand, 13252766 - 13252878
Alignment:
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaagaaatcatgcaaa 372  Q
    ||||||||||||||||| |||||||| ||||||| || | ||||  ||||||| ||||| ||  |  ||||||| |||||||||||||||||||||||||    
T  13252766 tttgtaatgttttctatttttgagtc-tgtaattctagttttcccaaaacataacaattttaggggggttttgaagtaattcacgaagaaatcatgcaaa 13252864  T
Q  373 tcggcaaagcaaga 386  Q
    ||| |||| |||||    
T  13252865 tcgacaaatcaaga 13252878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 236 - 388
Target Start/End: Complemental strand, 22468755 - 22468603
Alignment:
Q  236 agaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta 335  Q
    |||| ||||||||||  |||  |||||||||||  | |||||||||||||| ||||| |||||| |||| || |||| ||| ||||||||| ||||| ||    
T  22468755 agagcagtattagaacaatttattatgatttcgaaaaatttgtaatgttttatatatatgagtc-tgtatttctatttttcttgaaacataacaatttta 22468657  T
Q  336 tgatgttttgatgtaat-tcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
     |   ||||| |||||  |||||||||||||||||| ||||||||| |||||||    
T  22468656 ggtgattttgttgtaaaatcacgaagaaatcatgcatatcggcaaaacaagaca 22468603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 288
Target Start/End: Complemental strand, 14195826 - 14195722
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    ||||||||||| |||||  ||| ||||||| ||||||||||||    |||| ||||||||||||||    |||||||||||||||||| |||||||| ||    
T  14195826 gttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaacagaggagtattagagcagttgcttatgatttcgggaaatttgtaacgt 14195727  T
Q  284 tttct 288  Q
    |||||    
T  14195726 tttct 14195722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 384
Target Start/End: Original strand, 17887729 - 17887948
Alignment:
Q  164 ttgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatga 263  Q
    ||||||| |||||||| |  ||||||||||| || ||  ||| ||||||| |||  |||||  ||| || |||||||||| ||||| | ||||| ||||     
T  17887729 ttgatgacaggtcatcctacgttattcttagcatatttttcagtcatttttagttagttttg-atccaagatagaggagttttagagaaattgcctatgg 17887827  T
Q  264 tttc-gggacattt-gtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaag 360  Q
    |||  ||||||||| ||||||||||| || |||||||||||||||| || | || |  || || |||||||||||| |||||| ||||||||||| ||||    
T  17887828 ttttagggacattttgtaatgttttc-at-tttgagtcatgtaattgtactttttcaaaatca-agcaattctatggtgtttttgatgtaattcaagaag 17887924  T
Q  361 aaatcatgcaaatcggcaaagcaa 384  Q
    ||| |||||||||||| |||||||    
T  17887925 aaaacatgcaaatcggaaaagcaa 17887948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 298
Target Start/End: Original strand, 23173684 - 23173818
Alignment:
Q  164 ttgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatga 263  Q
    ||||||| | ||||||||  ||||||||||| |||||  ||| | ||||| | |||||||||  |  ||||  ||||||||||||||  ||||  |||||    
T  23173684 ttgatgacatgtcatcttacgttattcttagcatgtttttcagttatttttaataggttttagctgcaaaaaggaggagtattagaacaattgtctatga 23173783  T
Q  264 tttcgggacatttgtaatgttttctatatttgagt 298  Q
    ||| || || |||||||||||||||||||||||||    
T  23173784 ttttggaacttttgtaatgttttctatatttgagt 23173818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 377
Target Start/End: Original strand, 11578710 - 11578850
Alignment:
Q  236 agaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta 335  Q
    ||||||||||||||   ||| | ||||||||| |||| |||||||| |||| |||||||||||| | ||||| || | |||| |||||||| ||||| ||    
T  11578710 agaggagtattagagcaattacctatgatttcaggacttttgtaatattttttatatttgagtc-tataattctagttttcccgaaacataacaatttta 11578808  T
Q  336 tgatgttttgatgtaattcacgaagaaatcatgcaaatcggc 377  Q
     |   |||||| |||| ||||||||||||  |||||||||||    
T  11578809 ggggattttgaagtaaatcacgaagaaatattgcaaatcggc 11578850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 388
Target Start/End: Complemental strand, 9501974 - 9501886
Alignment:
Q  301 tgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaatt-cacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    ||||||| || | |||| |||||||||||||| || ||||||||| ||||| | ||||||||||||||||  |||||| ||||||||||    
T  9501974 tgtaattctaatcttcccgaaacatagcaattttaggatgttttgttgtaaatgcacgaagaaatcatgcttatcggctaagcaagaca 9501886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 274 - 386
Target Start/End: Original strand, 39270381 - 39270492
Alignment:
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaat 373  Q
    ||||||||||||||||||||||||| |||||||| || | |||   ||||||  ||||| || |  | ||| | |||||||||||||||| |||||||||    
T  39270381 tttgtaatgttttctatatttgagt-atgtaattctagttttctcaaaacatgacaattttaggggggttttaagtaattcacgaagaaaccatgcaaat 39270479  T
Q  374 cggcaaagcaaga 386  Q
    ||||||| |||||    
T  39270480 cggcaaatcaaga 39270492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 283 - 388
Target Start/End: Complemental strand, 19154816 - 19154710
Alignment:
Q  283 ttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaa-tcatgcaaatcggcaaa 380  Q
    ||||||||||||||||| |||||| | | | |||| ||||||||| |||| || | |||| ||||||||||||||||| ||| |||||||||| ||||||    
T  19154816 ttttctatatttgagtc-tgtaatcagagttttcccgaaacataggaattatagggtgttcttgatgtaattcacgaaaaaaatcatgcaaattggcaaa 19154718  T
Q  381 gcaagaca 388  Q
    | ||||||    
T  19154717 gtaagaca 19154710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 283 - 388
Target Start/End: Complemental strand, 20754215 - 20754109
Alignment:
Q  283 ttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaa-tcatgcaaatcggcaaa 380  Q
    ||||||||||||||||| |||||| | | | |||| ||||||||| |||| || | |||| ||||||||||||||||| ||| |||||||||| ||||||    
T  20754215 ttttctatatttgagtc-tgtaatcagagttttcccgaaacataggaattatagggtgttcttgatgtaattcacgaaaaaaatcatgcaaattggcaaa 20754117  T
Q  381 gcaagaca 388  Q
    | ||||||    
T  20754116 gtaagaca 20754109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 3400239 - 3400293
Alignment:
Q  98 tttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagta 152  Q
    |||||||| |||||||||| | ||| || ||||||||||||||||||||||||||    
T  3400239 tttccaagatggatcagtggaaaaaacccagttttcttctcttaaaccctaagta 3400293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 332
Target Start/End: Complemental strand, 4988248 - 4988148
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    ||||||||||||||||| |   ||||| ||||||||   |||||||| ||||||||  |||||||| | |||||||| |||| |||| ||||||||||||    
T  4988248 aaaatagaggagtattatatcaattgcctatgattttccgacatttgaaatgtttttcatatttgaat-atgtaattctattcttcccgaaacatagcaa 4988150  T
Q  331 tt 332  Q
    ||    
T  4988149 tt 4988148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 332
Target Start/End: Complemental strand, 4992346 - 4992246
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    ||||||||||||||||| |   ||||| ||||||||   |||||||| ||||||||  |||||||| | |||||||| |||| |||| ||||||||||||    
T  4992346 aaaatagaggagtattatatcaattgcctatgattttccgacatttgaaatgtttttcatatttgaat-atgtaattctattcttcccgaaacatagcaa 4992248  T
Q  331 tt 332  Q
    ||    
T  4992247 tt 4992246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 315533 - 315589
Alignment:
Q  88 ttttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaac 144  Q
    |||||||| ||||||||||||||  || | ||||||||| |||||||||||||||||    
T  315533 ttttgcttgttttccaagctggaagagcgaataaagccttgttttcttctcttaaac 315589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 384
Target Start/End: Original strand, 13281882 - 13281946
Alignment:
Q  320 aaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    |||||||||||||||| | |||| | | |||||||| ||||| |||||||||||| |||||||||    
T  13281882 aaacatagcaattctacggtgttctcacgtaattcaagaagatatcatgcaaatcagcaaagcaa 13281946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 384
Target Start/End: Complemental strand, 1732592 - 1732549
Alignment:
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    ||||||||||||||| ||  ||||||||||||||||||||||||    
T  1732592 ttttgatgtaattcaagacaaaatcatgcaaatcggcaaagcaa 1732549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 20446618 - 20446681
Alignment:
Q  89 tttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagta 152  Q
    ||||||| ||||||||| |||||||  | |||||||  |||||||||||||||| |||||||||    
T  20446618 tttgcttgttttccaagatggatcaacgaataaagctcagttttcttctcttaatccctaagta 20446681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 326
Target Start/End: Complemental strand, 23897271 - 23897177
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacata 326  Q
    |||| |||||||||||| |   ||||| ||||||||| ||||||||||||| |||| ||||||| |||| ||||||| |||| || | ||||||||    
T  23897271 aaaacagaggagtattatatcaattgcctatgatttcaggacatttgtaatattttttatattttagtc-tgtaattctattctttccgaaacata 23897177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 380
Target Start/End: Complemental strand, 3173217 - 3173128
Alignment:
Q  291 atttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    |||||||| |||||||| || | ||||||||||||||||||  || |  | |||||| ||||||||| ||||||||||| |||||||||||    
T  3173217 atttgagt-atgtaattctagttttcctgaaacatagcaatattagggggtttttgaagtaattcactaagaaatcatgaaaatcggcaaa 3173128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 7493689 - 7493751
Alignment:
Q  88 ttttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaag 150  Q
    |||||||| |||||||||||||| | ||| | ||| || ||||||||| ||||||||||||||    
T  7493689 ttttgcttgttttccaagctggacctgtgtaaaaaacccagttttcttttcttaaaccctaag 7493751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 394
Target Start/End: Original strand, 10991127 - 10991193
Alignment:
Q  329 aattctatgatgttttgatgtaattcacgaagaaatc-atgcaaatcggcaaagcaagacacttgaa 394  Q
    ||||||| | ||||||||||||||| | |||||||||  |||||||||||||||||| ||| |||||    
T  10991127 aattctagggtgttttgatgtaatttaagaagaaatctttgcaaatcggcaaagcaaaacatttgaa 10991193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 3189516 - 3189561
Alignment:
Q  344 tgatgtaattcacgaagaaatcatgcaaatc-ggcaaagcaagaca 388  Q
    ||||||||||||||||||||||| |||| || ||||||||||||||    
T  3189516 tgatgtaattcacgaagaaatcacgcaactcaggcaaagcaagaca 3189561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 7777759 - 7777726
Alignment:
Q  127 agttttcttctcttaaaccctaagtaaccatatg 160  Q
    ||||||||| ||||||||||||||||||||||||    
T  7777759 agttttcttatcttaaaccctaagtaaccatatg 7777726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 374
Target Start/End: Original strand, 10585260 - 10585396
Alignment:
Q  238 aggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatg 337  Q
    ||||||||||| |  ||| | ||||||||||||| ||||||||| ||||||| || | ||| |||||||| | || || | |||||||| ||||| || |    
T  10585260 aggagtattaggacaatttcctatgatttcgggagatttgtaatattttctacatctaagt-atgtaattcttttttttccgaaacataacaattttagg 10585358  T
Q  338 atgtt-ttgatgtaattcacgaagaaatcatgcaaatc 374  Q
      ||| |||| ||||||||| ||||||||| |||||||    
T  10585359 gggttcttgaagtaattcacaaagaaatcaagcaaatc 10585396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 20470442 - 20470405
Alignment:
Q  127 agttttcttctcttaaaccctaagtaaccatatgttat 164  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  20470442 agttttcttctattaaaccctaagtaatcatatgttat 20470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 388
Target Start/End: Complemental strand, 12170 - 11967
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    |||||||||| | ||||  ||| |||||||||||||||||||||   | ||||||||||||||| |   ||| |||||||||||||||||||| ||||||    
T  12170 gttattcttactttgtttttcattcattttcagtaggttttacaaacagaatagaggagtattatattaattccttatgatttcgggacatttataatgt 12071  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagca 383  Q
    |||||||||||||||| ||||||| |||| ||||  |||||||||||||||| | ||||||||| ||||| ||||||||||||| |||||| ||||||||    
T  12070 tttctatatttgagtc-tgtaattctattcttcccaaaacatagcaattctagggtgttttgatttaatttacgaagaaatcatacaaatcagcaaagca 11972  T
Q  384 agaca 388  Q
    |||||    
T  11971 agaca 11967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 207 - 386
Target Start/End: Original strand, 12828 - 13014
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgg-------gacatttgtaatgttttctatatttgagtc 299  Q
    ||||||||| |||||||| |||| | |||||||||||||||||   ||||| |||||||| ||       || ||||||||||||||  |||||||||||    
T  12828 tcattttcaataggtttttcatctagaatagaggagtattagagcaattgcctatgattttggattttgggatatttgtaatgtttttcatatttgagtc 12927  T
Q  300 atgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |||| ||| || | |||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||| ||||||||||    
T  12928 atgttattctacttttcctgaaacatagcaattctaggatgttttgatgtaattcacaaagaaatcaagcaaatcgacaaagcaaga 13014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 165 - 388
Target Start/End: Original strand, 88436 - 88659
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| | ||||||||  ||||||||||| |||||  ||||||||||||||||||||||||   |||||||||||||| |||||   ||||  ||||||    
T  88436 tgatgacatgtcatcttacgttattcttagcatgtttttcaatcattttcagtaggttttaccaaaaaaatagaggagtcttagagcaattgtctatgat 88535  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaa 363  Q
    || |||||||||||| |||||||||||||| |||| |||||||||||| || | | ||||||| |||| || |||||| |||||||||||||| ||||||    
T  88536 tttgggacatttgtattgttttctatatttcagtc-tgtaattatattctttccggaacatagaaattttaggatgttcttgatgtaattcacaaagaaa 88634  T
Q  364 tcatgcaaatcggcaaagcaagaca 388  Q
    |||||||||||||||| ||||||||    
T  88635 tcatgcaaatcggcaatgcaagaca 88659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 1e-47; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 184 - 388
Target Start/End: Original strand, 18447459 - 18447662
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    ||||||||||| ||||| || | ||||||| ||||||||||||||| | | |||||| |||||||| | ||||||||||||||||||| ||||||||| |    
T  18447459 gttattcttagcatgtttatgagtcatttttagtaggttttacatccagattagaggggtattagagaaattgcttatgatttcgggatatttgtaattt 18447558  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagca 383  Q
    |||||||||||||||  ||||||| |||| |||  |||||||| ||||| || | |||||| |||||||||||||| |||||||||||||||| ||||||    
T  18447559 tttctatatttgagt-ttgtaattctattcttctcgaaacataacaattttagggtgttttaatgtaattcacgaacaaatcatgcaaatcggaaaagca 18447657  T
Q  384 agaca 388  Q
    |||||    
T  18447658 agaca 18447662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 165 - 384
Target Start/End: Original strand, 1832054 - 1832272
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| | ||||||||  ||||||||  | |||||  ||| |||| || ||||||||||||||| | |||||||||||||||||   |||||| || ||    
T  1832054 tgatgacatgtcatcttatgttattctaggcatgtttttcagtcatattaagtaggttttacatccagaatagaggagtattagagcaattgctcataat 1832153  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaat 364  Q
    || | || |||||||||||||||||||||| ||||| ||||||||||| |||| |||||||| ||||||| || ||||||||||||||||||||| ||||    
T  1832154 tttgagatatttgtaatgttttctatatttaagtcaagtaattatattcttcccgaaacataacaattct-tggtgttttgatgtaattcacgaaaaaat 1832252  T
Q  365 catgcaaatcggcaaagcaa 384  Q
    ||||||||||||||||||||    
T  1832253 catgcaaatcggcaaagcaa 1832272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 165 - 371
Target Start/End: Original strand, 12246565 - 12246770
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| ||||||||||  |||||| |||  |||||  ||  ||||||||| |||||||| |||| | |||| |||||||||| ||  ||||||||||||    
T  12246565 tgatgacaggtcatcttatgttatttttaacatgtttttcgctcattttcaataggtttttcatccagaataaaggagtattaaaacaattgcttatgat 12246664  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaat 364  Q
    | ||||||| ||||||||||||||||| |||||||||||||||||||| |||| |||| ||||||||| || | | |||||||||||||||| |||||||    
T  12246665 t-cgggacacttgtaatgttttctatacttgagtcatgtaattatattcttcccgaaatatagcaattttagggtattttgatgtaattcacaaagaaat 12246763  T
Q  365 catgcaa 371  Q
    |||||||    
T  12246764 catgcaa 12246770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 165 - 384
Target Start/End: Original strand, 9849707 - 9849926
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| ||||||||||  |||||||||||||||||  ||| ||||||| ||||||||||||    |||| | ||||||||||||   ||||| ||||||    
T  9849707 tgatgacaggtcatcttacgttattcttagtatgtttttcagtcatttttagtaggttttaccaacaaaacaaaggagtattagatcaattgcctatgat 9849806  T
Q  265 ttcgggaca-tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaa 363  Q
    |||  || | ||||||| |||| |||||||||||| |||||||| | || |||| |||||||||||||| || | |||||| ||||||||||||||||||    
T  9849807 ttcaagaaaatttgtaaagtttcctatatttgagt-atgtaattttgttcttcccgaaacatagcaattttagggtgtttttatgtaattcacgaagaaa 9849905  T
Q  364 tcatgcaaatcggcaaagcaa 384  Q
    |||||||||||||||||||||    
T  9849906 tcatgcaaatcggcaaagcaa 9849926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 187 - 368
Target Start/End: Original strand, 19883534 - 19883715
Alignment:
Q  187 attcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgtttt 286  Q
    ||||||||||||||  || |||||||||||||||||||||    |||  || ||||||||||||  ||||  ||||||||||||||||||||||||||||    
T  19883534 attcttagtatgtttttcgatcattttcagtaggttttaccaacaaagcaggggagtattagaacaattgtctatgatttcgggacatttgtaatgtttt 19883633  T
Q  287 ctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatg 368  Q
    ||||||||||||| | |||||||||| |||| ||||||||| |||| || | || ||||||||||||||||||||||||||||    
T  19883634 ctatatttgagtc-tataattatattcttcccgaaacatagaaattatagggtgtttttgatgtaattcacgaagaaatcatg 19883715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 184 - 388
Target Start/End: Original strand, 16669740 - 16669944
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    ||||||||||| |||||  ||||||| |||||||||||||||||   | || ||   ||||||||||  |||||||||||||||| || ||||||||| |    
T  16669740 gttattcttagcatgtttttcaatcaatttcagtaggttttacaagcagaagaggaaagtattagaacaattgcttatgatttcgagaaatttgtaatat 16669839  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgt-aattcacgaagaaatcatgcaaatcggcaaagc 382  Q
    ||||||||||||||| ||||||||||||| ||||  ||||| ||||||| || ||||||||| | | |||||||||| |||||||||| |||||||||||    
T  16669840 tttctatatttgagt-atgtaattatattcttcccaaaacaaagcaattttaggatgttttgttttaaattcacgaaaaaatcatgcatatcggcaaagc 16669938  T
Q  383 aagaca 388  Q
    ||||||    
T  16669939 aagaca 16669944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 257 - 388
Target Start/End: Complemental strand, 13588723 - 13588592
Alignment:
Q  257 cttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcac 356  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||  ||||||||||||| || | |||||||||||||| |||    
T  13588723 cttatgatttcgggacatttgttatgttttctatatttgagtcatataataatattcttccaaaaacatagcaattatagggtgttttgatgtaatccac 13588624  T
Q  357 gaagaaatcatgcaaatcggcaaagcaagaca 388  Q
     |||||||||||||||||| |||||| |||||    
T  13588623 aaagaaatcatgcaaatcgacaaagctagaca 13588592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 165 - 380
Target Start/End: Complemental strand, 25025203 - 25024989
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| ||||||||||  ||||||||||| |||||  ||| ||||||| ||||||||||||    |||| | ||||| |||||    ||||| ||||||    
T  25025203 tgatgacaggtcatcttacgttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaacaaaggagcattagtgcaattgcctatgat 25025104  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaat 364  Q
    || ||||||||||||||||||||||||||||||| |||||||  | || || | ||||||||| |||| || | |||||| |||||||||||||||||||    
T  25025103 tttgggacatttgtaatgttttctatatttgagt-atgtaatcctgttctttccgaaacatagtaattttagggtgtttttatgtaattcacgaagaaat 25025005  T
Q  365 catgcaaatcggcaaa 380  Q
    ||||||||||||||||    
T  25025004 catgcaaatcggcaaa 25024989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 165 - 388
Target Start/End: Complemental strand, 17434531 - 17434305
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| ||||||||||  |||||| |||| |||||  | | |||||||||||||||||||  |    |||||||||||||||||   ||||||||||||    
T  17434531 tgatgacaggtcatcttacgttatttttagcatgtttttaagtcattttcagtaggttttaattgcggaatagaggagtattagatcaattgcttatgat 17434432  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaa----acatagcaattctatgatgttttgatgtaattcacgaag 360  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| |||| |||| |||    |  ||||||||||| | | |||||||||| ||||| |||    
T  17434431 ttcgggacatttgtaatgttttctatatttgggtc-tgtaattctattcttcccgaaagttaattagcaattctagggtattttgatgtatttcacaaag 17434333  T
Q  361 aaatcatgcaaatcggcaaagcaagaca 388  Q
    |||||||| ||||||||||| |||||||    
T  17434332 aaatcatgaaaatcggcaaaacaagaca 17434305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 207 - 394
Target Start/End: Complemental strand, 9054060 - 9053874
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    |||||||||||||||||||||   | |||||| ||||||||||   |||| |||||||||| ||||||||||||| ||||||||||||||||| | ||||    
T  9054060 tcattttcagtaggttttacaagcagaatagatgagtattagatcaattggttatgatttcaggacatttgtaatattttctatatttgagtc-tataat 9053962  T
Q  307 tatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagacacttgaa 394  Q
       ||| |||  |||||||||||||| || | | |||||||||||| ||||||||||||||||||||| |||||| |||||| |||||    
T  9053961 acaattcttctcgaaacatagcaattttagggtattttgatgtaatgcacgaagaaatcatgcaaatcagcaaagtaagacatttgaa 9053874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 209 - 386
Target Start/End: Complemental strand, 17108771 - 17108594
Alignment:
Q  209 attttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaatt 307  Q
    ||||||||||||||||| || ||||||  || |||||||||||| ||||| ||||||||| |||| ||||||||||||| |||||||||||| |||||||    
T  17108771 attttcagtaggttttaacagcaaaaag-gatgagtattagaaaaattgcctatgatttcaggacttttgtaatgttttttatatttgagtc-tgtaatt 17108674  T
Q  308 atattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
     || | |||| |||||||||||||| ||||  | |||||| |||||||||||||||||||||||||||||| || |||||    
T  17108673 ctagttttcccgaaacatagcaattttatggggtttttgaagtaattcacgaagaaatcatgcaaatcggcgaatcaaga 17108594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 185 - 386
Target Start/End: Complemental strand, 17711383 - 17711182
Alignment:
Q  185 ttattcttagtatgttcatcaatcattttcagtaggttttacat-caaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    |||||||||| |||||  | | |||||||||||||||||||  | ||||||| ||||||||||||||  ||||| ||| |||||||||| ||||| ||||    
T  17711383 ttattcttagcatgttttttagtcattttcagtaggttttagctgcaaaaat-gaggagtattagaacgattgcctataatttcgggacttttgtgatgt 17711285  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagc 382  Q
    |||||||||||||||| | ||||| || | |||| |||||||||||||| ||  |  ||||||| ||||||||||||||||||||||||||||||||| |    
T  17711284 tttctatatttgagtc-tttaattctagttttcccgaaacatagcaattttaggggggttttgaagtaattcacgaagaaatcatgcaaatcggcaaatc 17711186  T
Q  383 aaga 386  Q
    ||||    
T  17711185 aaga 17711182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 231 - 388
Target Start/End: Original strand, 20828205 - 20828362
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    |||||| |||||||||| ||  ||||| |||||||| ||||||||||||||| ||||| |||||||||| |||||| | | | |||| ||||||||||||    
T  20828205 aaaataaaggagtattacaacaattgcctatgattttgggacatttgtaatggtttctgtatttgagtc-tgtaatgagagttttcccgaaacatagcaa 20828303  T
Q  331 ttctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    || || |  ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20828304 ttttagggcgttcttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 20828362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 238 - 386
Target Start/End: Original strand, 11252202 - 11252349
Alignment:
Q  238 aggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatg 337  Q
    |||||||||||||  ||||| |||||||||||||| |||||||| ||||||||||||||||| ||| ||| || | || | |||||||||||||| || |    
T  11252202 aggagtattagaacgattgcctatgatttcgggacttttgtaatattttctatatttgagtc-tgtgattctagtttttccgaaacatagcaattttagg 11252300  T
Q  338 atgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
      ||||||| ||||||||||||||||||||||||||||||||| |||||    
T  11252301 gggttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaaga 11252349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 165 - 386
Target Start/End: Complemental strand, 15166565 - 15166344
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| ||||||||||   |||||||||| |||||  ||| ||||||||||||||||||| || ||||||  ||||||||||||||  ||||| | |||    
T  15166565 tgatgacaggtcatcttacattattcttagcatgtttttcagtcattttcagtaggttttagcagcaaaaac-gaggagtattagaacgattgcctgtga 15166467  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaa 362  Q
    ||||||||| |||||||||||||||||||||||||  ||||||| || | |||| ||||||||| |||| || |  | |||||| |||||||||| | ||    
T  15166466 tttcgggacttttgtaatgttttctatatttgagt-ttgtaattctaattttcccgaaacataggaattttagggggtttttgaagtaattcacggaaaa 15166368  T
Q  363 atcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||| ||||| |||||    
T  15166367 atcatgcaaatcagcaaatcaaga 15166344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 210 - 333
Target Start/End: Original strand, 23970706 - 23970831
Alignment:
Q  210 ttttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttat--gatttcgggacatttgtaatgttttctatatttgagtcatgtaatt 307  Q
    |||||||||||||||||||| |||||| ||||||||||||   |||||||||  |||||||| |||||||||||||||||| ||||||||||||||||||    
T  23970706 ttttcagtaggttttacatccaaaataaaggagtattagagcaattgcttatatgatttcggaacatttgtaatgttttctgtatttgagtcatgtaatt 23970805  T
Q  308 atattgttcctgaaacatagcaattc 333  Q
     |||| |||| |||||||| ||||||    
T  23970806 gtattcttcccgaaacataacaattc 23970831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 233 - 384
Target Start/End: Original strand, 25117933 - 25118086
Alignment:
Q  233 aatagaggagtattagaaacattgcttatgattt-cgggacatttgtaatgtttt-ctatatttgagtcatgtaattata-ttgttcctgaaacatagca 329  Q
    ||||||||| ||||||||  ||| | |||||||| | ||||||||||||| |||| ||||||| ||||||||||||| || || ||||||||||||||||    
T  25117933 aatagaggactattagaacaattacctatgattttcaggacatttgtaatttttttctatatt-gagtcatgtaattctagtttttcctgaaacatagca 25118031  T
Q  330 attctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    |||||| | ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  25118032 attctaaggtgttttgatgtaattcaagaagaaatcatgcaaatcgacaaagcaa 25118086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 184 - 332
Target Start/End: Complemental strand, 7583870 - 7583723
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatg 282  Q
    ||||||||||| || ||  ||||||||||||||||||||||| || ||||||  ||||||||||||||  ||||| ||||||||| |||| |||||||||    
T  7583870 gttattcttagcatctttttcaatcattttcagtaggttttagcagcaaaaag-gaggagtattagaacaattgcctatgatttcaggacttttgtaatg 7583772  T
Q  283 ttttctatatttgagtcatgtaattatattgttcctgaaacatagcaatt 332  Q
    ||||||||||||||||| ||||||| || | |||| ||||||||||||||    
T  7583771 ttttctatatttgagtc-tgtaattctagttttcccgaaacatagcaatt 7583723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 207 - 386
Target Start/End: Complemental strand, 14573504 - 14573325
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||| ||||||||||||    |||| ||||||||||||||   ||||  ||| |||||  || |||||||||||||||||||||||| | |||||||    
T  14573504 tcattttaagtaggttttactagcaaaacagaggagtattagagcaattgtctattatttcatgatatttgtaatgttttctatatttgaat-atgtaat 14573406  T
Q  307 tatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    | |||| |||| |||||||||||||| ||   |||||| |||||||||||| |||||||||||||||||| ||||||||||    
T  14573405 tctattcttcccgaaacatagcaattttagtgtgtttttgatgtaattcacaaagaaatcatgcaaatcgtcaaagcaaga 14573325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 237 - 370
Target Start/End: Complemental strand, 11241123 - 11240989
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttc-gggacatttgtaatgttttctatatttgagtcatgtaattata-ttgttcctgaaacatagcaattct 334  Q
    ||||||||||||||  |||| |||||||||  ||||||||||||||||||||||| |||||||||||||||| || || |||| ||||||||| ||||||    
T  11241123 gaggagtattagaacaattgtttatgatttttgggacatttgtaatgttttctat-tttgagtcatgtaattctagtttttcccgaaacatagaaattct 11241025  T
Q  335 atgatgttttgatgtaattcacgaagaaatcatgca 370  Q
    | |||||||||| |||||||| |||||||| |||||    
T  11241024 aggatgttttgaggtaattcaagaagaaattatgca 11240989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 165 - 374
Target Start/End: Original strand, 19556541 - 19556746
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| ||||||||||  ||||||||||| |||||  ||| ||||||||| ||||||||| || ||| ||  | ||||||||||||  ||||| |||||    
T  19556541 tgatgacaggtcatcttacgttattcttagcatgttt-tcagtcattttcaataggttttagcaccaataa--ggggagtattagaacgattgcctatga 19556637  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaa 363  Q
    ||| || || |||||||||||||||||||||||||| || |||| || | |||| |||||||||| ||| || |  ||||||| ||||||||||||||||    
T  19556638 ttttggaacttttgtaatgttttctatatttgagtc-tg-aattctaattttcccgaaacatagctattttagggggttttgaagtaattcacgaagaaa 19556735  T
Q  364 tcatgcaaatc 374  Q
    |||||||||||    
T  19556736 tcatgcaaatc 19556746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 175 - 394
Target Start/End: Original strand, 12836080 - 12836295
Alignment:
Q  175 tcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacat 274  Q
    |||||||  ||||||||||| |||||  ||| ||||||| ||||  |||||||   |||||| |||||||||||||  ||| | |||||||||| |||||    
T  12836080 tcatcttacgttattcttagcatgtttttcagtcatttttagtatattttacaaggaaaataaaggagtattagaacaattacatatgatttcgtgacat 12836179  T
Q  275 ttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatc 374  Q
    ||   ||||||||||| |||||||| ||||||| |||| |||| ||| |||| |||||  | | ||||||| | |||||||  ||||||||||||| |||    
T  12836180 tt---atgttttctatttttgagtc-tgtaattctattcttcccgaagcataacaatttaagggtgttttgttctaattcataaagaaatcatgcatatc 12836275  T
Q  375 ggcaaagcaagacacttgaa 394  Q
    |||||||||||||| |||||    
T  12836276 ggcaaagcaagacatttgaa 12836295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 207 - 379
Target Start/End: Complemental strand, 16928979 - 16928807
Alignment:
Q  207 tcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaa 305  Q
    ||||||||||||||||||| |  ||||||| ||||||||||||||  ||||  ||| ||||||| || |||||||||||||||||||||||||| |||||    
T  16928979 tcattttcagtaggttttagcggcaaaaat-gaggagtattagaatgattgtctataatttcggaacttttgtaatgttttctatatttgagtc-tgtaa 16928882  T
Q  306 ttatattgttcctgaaacatagcaattcta--tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaa 379  Q
    || || | || |  ||||||||||||| ||   ||| |||||| ||||||||||||||||||||||||||||||||    
T  16928881 ttctagtttttccaaaacatagcaattttaagggat-ttttgaagtaattcacgaagaaatcatgcaaatcggcaa 16928807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 268 - 380
Target Start/End: Original strand, 19547155 - 19547266
Alignment:
Q  268 gggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcat 367  Q
    |||||| |||||||||||||||||||  |||||||||||| || | |||| |||||| | |||||||| | ||||||||||||||||| |||||||||||    
T  19547155 gggacacttgtaatgttttctatatta-agtcatgtaattctagttttcccgaaacaaaacaattctagggtgttttgatgtaattcaagaagaaatcat 19547253  T
Q  368 gcaaatcggcaaa 380  Q
    |||||||||||||    
T  19547254 gcaaatcggcaaa 19547266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 386
Target Start/End: Original strand, 11512045 - 11512247
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    ||||||||||  |||||  ||| ||| || ||||||||||||||   |||| | |||||||||||||  ||||  ||||||||| ||||||||||||| |    
T  11512045 gttattcttatcatgtttttcagtcaattgcagtaggttttacaagcaaaacaaaggagtattagaataattgtctatgatttcaggacatttgtaatat 11512144  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagc 382  Q
    |||| |||||| || | ||||||| |||| |||  |||| |||||||||||| | || ||||||| |||| ||| ||||||||||||||||||||||||     
T  11512145 tttcaatatttaagac-tgtaattctattcttctcgaaagatagcaattctagggtgtttttgatataatccacaaagaaatcatgcaaatcggcaaagg 11512243  T
Q  383 aaga 386  Q
    ||||    
T  11512244 aaga 11512247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 185 - 386
Target Start/End: Complemental strand, 10106372 - 10106171
Alignment:
Q  185 ttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgtt 284  Q
    |||||||||| |||||  ||  |||||||||||||||||||  |  ||||  ||||||||||| ||  ||||  |||||||||||||| | |||||||||    
T  10106372 ttattcttagcatgtttttctgtcattttcagtaggttttagctgcaaaaaggaggagtattacaacaattgtctatgatttcgggacttctgtaatgtt 10106273  T
Q  285 ttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagca 383  Q
    ||||||||||||||| |||||||||| | |||| |||||||||||||| || |  | |||| |  ||||||| ||||||||||| |||||||| ||| ||    
T  10106272 ttctatatttgagtc-tgtaattatagttttcccgaaacatagcaattttagggggtttttaaaataattcatgaagaaatcatacaaatcggtaaatca 10106174  T
Q  384 aga 386  Q
    |||    
T  10106173 aga 10106171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 374
Target Start/End: Complemental strand, 25096323 - 25096188
Alignment:
Q  239 ggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tg 337  Q
    ||||||||||||  ||||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||| | || |||||| ||| ||||| ||  |    
T  25096323 ggagtattagaacgattgcctatgatttcgggacttttgtaatgttttctgtatttgagtc-tgtaattatagtttttctgaaaaatatcaattttaggg 25096225  T
Q  338 atgttttgatgtaattcacgaagaaatcatgcaaatc 374  Q
      ||||||| |||||||||||||||||| ||||||||    
T  25096224 gggttttgaagtaattcacgaagaaatcctgcaaatc 25096188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 236 - 388
Target Start/End: Complemental strand, 5691782 - 5691629
Alignment:
Q  236 agaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta 335  Q
    ||||||||||||||   ||||  ||||||||| | ||||||||| ||||||||||||||||||| | ||||| |||| |||| || ||||||||||| ||    
T  5691782 agaggagtattagatcaattgtctatgatttcagaacatttgtattgttttctatatttgagtc-tataattctattcttcccgagacatagcaatttta 5691684  T
Q  336 tgatgtt-ttgatgtaattcacgaagaaatcatgcaaatc-ggcaaagcaagaca 388  Q
     | |||| ||||||||||||||||||||||||  |||| | ||||||||||||||    
T  5691683 gggtgttcttgatgtaattcacgaagaaatcaaacaaaccaggcaaagcaagaca 5691629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 165 - 386
Target Start/End: Original strand, 17335355 - 17335576
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| | ||||||||  ||||||||| | |||||  ||| |||||||||||| |||||| |   ||||  ||||||||||||||  ||||| ||||||    
T  17335355 tgatgacatgtcatcttacgttattcttggcatgtttttcagtcattttcagtaagttttagaagcaaaaaggaggagtattagaacgattgcctatgat 17335454  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaa 363  Q
    || | ||| |||||||| ||||||||| ||||||| ||||| | || | ||||  ||||||| ||||| || |  | |||||| ||||||||||||||||    
T  17335455 tttgagacttttgtaattttttctataattgagtc-tgtaactctagttttccataaacataacaattttagggggtttttgaagtaattcacgaagaaa 17335553  T
Q  364 tcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||| |||| |||||    
T  17335554 tcatgcaaatcgacaaatcaaga 17335576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 386
Target Start/End: Complemental strand, 22171801 - 22171625
Alignment:
Q  209 attttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaatt 307  Q
    ||||||| ||||||||| || ||||||  ||||||||||||||  ||||| ||||||||| |||  ||||||||||||||||||||||||| ||||||||    
T  22171801 attttcattaggttttagcagcaaaaag-gaggagtattagaatgattgcctatgatttcaggatttttgtaatgttttctatatttgagt-atgtaatt 22171704  T
Q  308 atattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
     ||   |||| ||||| ||| | || || |  ||||||| ||||||||||||||||||||| |||| |||||| |||||    
T  22171703 ctagctttcccgaaacgtagtagttttagggggttttgaagtaattcacgaagaaatcatgaaaattggcaaatcaaga 22171625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 166 - 386
Target Start/End: Original strand, 9536756 - 9536978
Alignment:
Q  166 gatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    ||||| ||||| ||||  ||||||||||| |||||  ||||| ||||||||||||||||| || ||||||  ||||||||||| ||  ||| | ||||||    
T  9536756 gatgacaggtcctcttatgttattcttagcatgtttttcaattattttcagtaggttttagcagcaaaaag-gaggagtattacaacaattacctatgat 9536854  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattat-attgttcctgaaacatagcaattctatgatg--ttttgatgtaattcacgaaga 361  Q
    || || || |||||||||||||||||||||||||| | ||||| | ||| ||||  ||||||||||||| || |  |  |||||| ||||||||||||||    
T  9536855 tttggaacttttgtaatgttttctatatttgagtc-tataattttaatttttccctaaacatagcaattttaggggggtttttgaagtaattcacgaaga 9536953  T
Q  362 aatcatgcaaatcggcaaagcaaga 386  Q
    |||||||  |||| ||||| |||||    
T  9536954 aatcatgttaatcagcaaatcaaga 9536978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 268 - 380
Target Start/End: Complemental strand, 10108241 - 10108129
Alignment:
Q  268 gggacatttgtaatgttttctatatttgagtcatgtaattata-ttgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatca 366  Q
    ||||||||| |||||||||||||||| || ||||||||||||| || |||| ||||||||| |||| || | ||||||||||||||| | ||||||||||    
T  10108241 gggacatttctaatgttttctatatt-gaatcatgtaattataatttttccagaaacatagtaattatagggtgttttgatgtaattgaagaagaaatca 10108143  T
Q  367 tgcaaatcggcaaa 380  Q
    ||||||||| ||||    
T  10108142 tgcaaatcgacaaa 10108129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 233 - 375
Target Start/End: Complemental strand, 23083729 - 23083588
Alignment:
Q  233 aatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaatt 332  Q
    |||||||||||||||||   |||| ||||||||| ||||| | |||||||||||||||||||||||  ||||| | |||| ||||  ||||||| |||||    
T  23083729 aatagaggagtattagagcaattgtttatgattttgggacgtctgtaatgttttctatatttgagt-ttgtaactctattcttccccaaacatatcaatt 23083631  T
Q  333 ctatgatgttttgatgtaattcacgaagaaatcatgcaaatcg 375  Q
     || |  |||||| |||||||||||||||||||| ||| ||||    
T  23083630 ttagggagttttgttgtaattcacgaagaaatcaggcatatcg 23083588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 174 - 373
Target Start/End: Original strand, 8968080 - 8968279
Alignment:
Q  174 gtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggac 272  Q
    ||||||||  ||||||||||| |||||  ||| ||||||| ||||||||||| || |||||| | || ||  ||||||  ||| | |||||||| || ||    
T  8968080 gtcatcttacgttattcttagcatgtttttcagtcattttaagtaggttttagcagcaaaaagatag-agatttagaacgattccctatgattttggtac 8968178  T
Q  273 atttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatg-atgttttgatgtaattcacgaagaaatcatgcaa 371  Q
     |||||||| ||||||||||||||||  ||||||| || | |||| |||| ||||||||| || | || |||||| ||||||||||||||||||||||||    
T  8968179 ttttgtaatattttctatatttgagtt-tgtaattctagttttcccgaaatatagcaattttagggattttttgaagtaattcacgaagaaatcatgcaa 8968277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 51885044 - 51885101
Alignment:
Q  98 tttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaacc 155  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  51885044 tttccaagctggatcggtgcagaaagcctagttttcttctcttaaaccctaagtaacc 51885101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 231 - 386
Target Start/End: Original strand, 17024756 - 17024913
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    |||| |||||| ||||||||  ||| | |||||||||||||||||||||||| |||||||||||||||| ||||||| || | |||| ||||||||| ||    
T  17024756 aaaaaagaggattattagaatgattccctatgatttcgggacatttgtaatggtttctatatttgagtc-tgtaattctagttttcccgaaacatagaaa 17024854  T
Q  331 ttctatgatg---ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    ||  | |  |   |||||| ||||||||| |||||||||||| |||||| ||| |||||    
T  17024855 tttgagggggggtttttgaagtaattcacaaagaaatcatgctaatcggaaaatcaaga 17024913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 333
Target Start/End: Original strand, 9263348 - 9263517
Alignment:
Q  163 attgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttat 261  Q
    ||||||||||||| |||||  |||||| |||| |||||  ||| |||  |||| ||||||||| || || || | ||||||||||||||  ||||  |||    
T  9263348 attgatgataggttatcttacgttatttttagcatgtttttcagtcaaattcaataggttttatcagcagaact-gaggagtattagaacaattgtctat 9263446  T
Q  262 gatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattc 333  Q
     |||| ||| ||||||||||||||| |||||||||||| ||||||| |||| |||| |||||||||||||||    
T  9263447 aattttgggtcatttgtaatgttttatatatttgagtc-tgtaattctattattcccgaaacatagcaattc 9263517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 394
Target Start/End: Complemental strand, 10236598 - 10236457
Alignment:
Q  253 attgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaa 351  Q
    ||||| ||||||||||| ||||||||||||| || |||| ||||||  ||||||| |||| ||||||||| ||||||||| || | |||| |||| ||||    
T  10236598 attgcctatgatttcggtacatttgtaatgtattttata-ttgagt-ttgtaattctattcttcctgaaaaatagcaattttagggtgttgttgaagtaa 10236501  T
Q  352 ttcacgaagaaatcatgcaaatc-ggcaaagcaagacacttgaa 394  Q
    ||||||||||||||| ||||||| | ||| |||||||| |||||    
T  10236500 ttcacgaagaaatcaagcaaatcagacaatgcaagacatttgaa 10236457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 15047770 - 15047654
Alignment:
Q  259 tatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttt---tgatgtaattca 355  Q
    |||||||||| |||| ||||| ||||||||||||||||||| |||||||||||| |||| ||| ||||| ||||||| | |||||   |||| |||||||    
T  15047770 tatgatttcgagacaattgtagtgttttctatatttgagtc-tgtaattatattcttccagaaccatagaaattctagggtgtttttctgatataattca 15047672  T
Q  356 cgaagaaatcatgcaaat 373  Q
     ||| |||||||||||||    
T  15047671 tgaataaatcatgcaaat 15047654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 15106654 - 15106770
Alignment:
Q  259 tatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttt---tgatgtaattca 355  Q
    |||||||||| |||| ||||| ||||||||||||||||||| |||||||||||| |||| ||| ||||| ||||||| | |||||   |||| |||||||    
T  15106654 tatgatttcgagacaattgtagtgttttctatatttgagtc-tgtaattatattcttccagaaccatagaaattctagggtgtttttctgatataattca 15106752  T
Q  356 cgaagaaatcatgcaaat 373  Q
     ||| |||||||||||||    
T  15106753 tgaataaatcatgcaaat 15106770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 380
Target Start/End: Original strand, 20316237 - 20316385
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacattt-gtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagca 329  Q
    |||||||| |||||||||||  ||| | || ||||| ||||||||| |||||| |||||||  ||||||||||||||| || | || |  |||||| | |    
T  20316237 aaaatagatgagtattagaataatttcctacgattttgggacattttgtaatgctttctat--ttgagtcatgtaattctagtttttccaaaacattgta 20316334  T
Q  330 attctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    ||| |||| ||||||||||||||||| ||||||||||||||| | ||||||    
T  20316335 attttatggtgttttgatgtaattcaagaagaaatcatgcaacttggcaaa 20316385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 384
Target Start/End: Original strand, 22217060 - 22217212
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattata-ttgttcctgaaacatagca 329  Q
    |||||| ||||| |||||||  ||||| |||||||||  |||||||   |||||||||||  |||||||||| |||| || || |||| |||||||| ||    
T  22217060 aaaataaaggagcattagaacaattgcctatgatttcatgacattttgtatgttttctat--ttgagtcatgaaattctagtttttcccgaaacatatca 22217157  T
Q  330 attctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
     ||||| | ||||||||||||||||| ||||| |||||||||||||  |||||||    
T  22217158 gttctagggtgttttgatgtaattcaagaagatatcatgcaaatcgataaagcaa 22217212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 155
Target Start/End: Original strand, 27303130 - 27303197
Alignment:
Q  88 ttttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaacc 155  Q
    |||||||| |||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||    
T  27303130 ttttgcttgttttccaagctggatcggtgcagaaagcccaattttcttctcttaaaccctaagtaacc 27303197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 378
Target Start/End: Complemental strand, 17661892 - 17661834
Alignment:
Q  320 aaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggca 378  Q
    |||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||    
T  17661892 aaacatagcaattctagggtgttttgatgtaattcaagaagaaatcatgcaaatcggca 17661834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 384
Target Start/End: Complemental strand, 7613768 - 7613614
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgat-ttcgggacattt-gtaatgttttctatatttgagtcatgtaattatattgttcct-gaaacatag 327  Q
    ||||||||||||||||||||  ||||| |||| | |||| || |||| ||||||||||||||  |||||| |||||||| || | || || ||||||| |    
T  7613768 aaaatagaggagtattagaacaattgcatatggtcttcgagatattttgtaatgttttctat--ttgagttatgtaattctagtttttctcgaaacatgg 7613671  T
Q  328 caattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    ||||| |  | |||||||| || ||||| ||||||||||||||||||||||||||||    
T  7613670 caattatggggtgttttgacgtgattcaagaagaaatcatgcaaatcggcaaagcaa 7613614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 386
Target Start/End: Complemental strand, 17218625 - 17218404
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||||||||||||||  ||||||||||| |||||  ||| ||| || ||||| |||||  |   ||||  ||||||||||||||  ||||| |||| |    
T  17218625 tgatgataggtcatcttacgttattcttagcatgtttttcagtcaatt-cagtaagttttcgaagcaaaaaggaggagtattagaacgattgcctatgtt 17218527  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg--ttttgatgtaattcacgaagaa 362  Q
    |||||||| |||||| |||||||||| |||||||| ||||||  || | |||| |||||||||||||| || |  |  ||| || | ||||||| |||||    
T  17218526 ttcgggacttttgtagtgttttctatctttgagtc-tgtaatcctaattttcccgaaacatagcaattttaggggggttttggaagcaattcacaaagaa 17218428  T
Q  363 atcatgcaaatcggcaaagcaaga 386  Q
    || |||||||||| |||| |||||    
T  17218427 ataatgcaaatcgacaaatcaaga 17218404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 209 - 386
Target Start/End: Original strand, 19603901 - 19604077
Alignment:
Q  209 attttcagtaggttttac-atcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaatt 307  Q
    |||||||||||||||||  | ||||||  |||||||||||||   ||||  || ||||||||||| ||| ||| |||||||||||||||||| | |||||    
T  19603901 attttcagtaggttttagtagcaaaaag-gaggagtattagagcaattgtctaagatttcgggacttttctaa-gttttctatatttgagtc-tataatt 19603997  T
Q  308 atattgttcctgaaacatagcaattctatga-tgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    ||| | |||| |||||||| ||||| || |  | |||||| |||||||||||||||||||||||||| || ||| |||||    
T  19603998 atagttttcccgaaacataacaattttaggcgttttttgaagtaattcacgaagaaatcatgcaaattggaaaatcaaga 19604077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 331
Target Start/End: Complemental strand, 4617119 - 4617026
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaat 331  Q
    ||||||||||||||| ||| | |||||||| ||||| |||||||||||||||||||||||||  ||||| | || | |||| |||||||||||||    
T  4617119 gaggagtattagaaagattacctatgatttagggacttttgtaatgttttctatatttgagt-ttgtaaatctagttttcccgaaacatagcaat 4617026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 209 - 332
Target Start/End: Complemental strand, 18750877 - 18750755
Alignment:
Q  209 attttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaatt 307  Q
    |||||||||||| |||| || ||||||  |||||||||||||   ||||| |||||||| ||||| ||||||||||||| ||||||||||| ||||||||    
T  18750877 attttcagtagggtttagcagcaaaaag-gaggagtattagagcaattgcctatgattttgggacttttgtaatgttttttatatttgagt-atgtaatt 18750780  T
Q  308 atattgttcctgaaacatagcaatt 332  Q
     || | |||  ||||||||||||||    
T  18750779 ctagttttctcgaaacatagcaatt 18750755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 340 - 386
Target Start/End: Complemental strand, 4616988 - 4616942
Alignment:
Q  340 gttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||    
T  4616988 gttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaaga 4616942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 19538951 - 19539022
Alignment:
Q  233 aatagaggagtattagaaacattgcttatgatttc-gggacatttgtaatgttttctatatttgagtcatgtaa 305  Q
    ||||||||||||||||||  ||||| ||||||||| | ||||||||||||||||||  ||||||||||||||||    
T  19538951 aatagaggagtattagaacaattgcctatgatttctgagacatttgtaatgttttc--tatttgagtcatgtaa 19539022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 290
Target Start/End: Original strand, 19667016 - 19667074
Alignment:
Q  233 aatagaggagtattagaaacattgcttatgatttc-gggacatttgtaatgttttctat 290  Q
    ||||||||||||||||||  ||||| ||||||||| |||||||||||||||||||||||    
T  19667016 aatagaggagtattagaacaattgcctatgatttctgggacatttgtaatgttttctat 19667074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 297
Target Start/End: Complemental strand, 12616811 - 12616679
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| | ||||||||  || |||||||  |||||  ||| || |||||||||||||||| || ||||||  || |||||||||||  ||| | |||||    
T  12616811 tgatgacatgtcatcttacgtaattcttaacatgtttttcagtctttttcagtaggttttagcagcaaaaag-gatgagtattagaacaatttcctatga 12616713  T
Q  264 tttcgggacatttgtaatgttttctatatttgag 297  Q
    ||||||||| |||||||||||||||| |||||||    
T  12616712 tttcgggacttttgtaatgttttctacatttgag 12616679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 209 - 277
Target Start/End: Complemental strand, 8140458 - 8140390
Alignment:
Q  209 attttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttg 277  Q
    |||||||||||||||| |||| | ||||||||||||||| ||  ||||||| |||||| ||||||||||    
T  8140458 attttcagtaggtttttcatctagaatagaggagtattaaaacaattgcttttgattttgggacatttg 8140390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 22527868 - 22527820
Alignment:
Q  340 gttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    |||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  22527868 gttttgttgtaattcatgaaaaaatcatgcaaatcggcaaagcaagaca 22527820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 394
Target Start/End: Complemental strand, 8140378 - 8140323
Alignment:
Q  339 tgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagacacttgaa 394  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||| |||||| |||||    
T  8140378 tgttttgatgtaattcacgaagaaatcttgctaattggcaaagtaagacatttgaa 8140323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 384
Target Start/End: Original strand, 19335386 - 19335429
Alignment:
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    ||||||||||||||| |||||||||||||||||||| |||||||    
T  19335386 ttttgatgtaattcaagaagaaatcatgcaaatcggtaaagcaa 19335429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 19919232 - 19919297
Alignment:
Q  259 tatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacata 326  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||| |||| |||  ||||||||    
T  19919232 tatgatttcggga-atttgtaatgttttctatatttgagtc-tgtaattctattattctcgaaacata 19919297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 385
Target Start/End: Original strand, 22350338 - 22350460
Alignment:
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaa 362  Q
    ||||||||||||||||||| | || |||||||||||| ||||||| |||| || | |||||||||||||| ||||   | |||| ||||||  |||| ||    
T  22350338 atttcgggacatttgtaatttattttatatttgagtc-tgtaattctattttttccgaaacatagcaattttatgggttcttgaagtaattagcgaacaa 22350436  T
Q  363 atcatgcaaatc-ggcaaagcaag 385  Q
    |||| | ||||| |||||||||||    
T  22350437 atcaagtaaatcaggcaaagcaag 22350460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 383
Target Start/End: Complemental strand, 9750589 - 9750481
Alignment:
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttg-atgtaattcacgaagaaatcatgcaaa 372  Q
    |||||||||||||| || || ||||||| ||||| || | |||||||||| ||| ||||| | | ||||||  |||||||||| |||||||||||| |||    
T  9750589 tttgtaatgttttc-at-ttcgagtcatctaattttagttttcctgaaacctagtaattccaaggtgttttttatgtaattcaagaagaaatcatgaaaa 9750492  T
Q  373 tcggcaaagca 383  Q
    |||||||||||    
T  9750491 tcggcaaagca 9750481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 386
Target Start/End: Complemental strand, 11782401 - 11782356
Alignment:
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |||||| |||||||||||||||||||| |||||||||||| |||||    
T  11782401 ttttgaagtaattcacgaagaaatcattcaaatcggcaaatcaaga 11782356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 379
Target Start/End: Complemental strand, 22346050 - 22345961
Alignment:
Q  290 tatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaa 379  Q
    |||||||||||||||||| || | | ||| ||| ||||||| |  | | |||| |||||||||||| ||||||||||||||||| |||||    
T  22346050 tatttgagtcatgtaattctagtttccctaaaatatagcaaattcaaggtgttatgatgtaattcaagaagaaatcatgcaaattggcaa 22345961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 387
Target Start/End: Complemental strand, 17277854 - 17277719
Alignment:
Q  253 attgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaa 351  Q
    ||||| |||||||||  ||||| ||||||||||| |||||||| || ||| |||| |||| ||||  ||||||||||||| || |  ||| |||| ||||    
T  17277854 attgcctatgatttcatgacatctgtaatgttttttatatttgtgt-atgcaattctattcttcccaaaacatagcaattttagggggttcttgaagtaa 17277756  T
Q  352 ttcacgaagaaatcatgcaaatc-ggcaaagcaagac 387  Q
      ||||||||||||| ||||||| |||||| ||||||    
T  17277755 aacacgaagaaatcaagcaaatcaggcaaaacaagac 17277719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 388
Target Start/End: Original strand, 15046726 - 15046772
Alignment:
Q  339 tgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    ||||||||||||||||| ||||||||   |||||||||||||||||||||    
T  15046726 tgttttgatgtaattcaggaagaaat---gcaaatcggcaaagcaagaca 15046772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 15107698 - 15107652
Alignment:
Q  339 tgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    ||||||||||||||||| ||||||||   |||||||||||||||||||||    
T  15107698 tgttttgatgtaattcaggaagaaat---gcaaatcggcaaagcaagaca 15107652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 97 - 148
Target Start/End: Original strand, 18898421 - 18898472
Alignment:
Q  97 ttttccaagctggatcagtgcataaagcctagttttcttctcttaaacccta 148  Q
    ||||||||||| |||||||||| |||||| | ||||||||||| ||||||||    
T  18898421 ttttccaagctagatcagtgcaaaaagcccaattttcttctctgaaacccta 18898472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 155
Target Start/End: Complemental strand, 25314949 - 25314882
Alignment:
Q  88 ttttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaacc 155  Q
    |||||||| ||||||||||||||||| || | || |   ||||||||||||||||||| |||||||||    
T  25314949 ttttgcttgttttccaagctggatcattggaaaatgttcagttttcttctcttaaaccttaagtaacc 25314882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 380
Target Start/End: Original strand, 26114377 - 26114416
Alignment:
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  26114377 ttttgatgtaattaacgaagaaattatgcaaatcggcaaa 26114416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 386
Target Start/End: Complemental strand, 10432203 - 10432054
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta- 335  Q
    ||||||||||||||  ||||  ||||||||||| || ||| |||| ||||||||||||||||  ||||||| ||   || |  ||||||||||||| ||     
T  10432203 gaggagtattagaactattgtctatgatttcggaacttttataatattttctatatttgagt-gtgtaattctagcttttccaaaacatagcaattttag 10432105  T
Q  336 tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
     | | | |||| |||||||| |||||||||||| ||||||| ||| |||||    
T  10432104 gggtttattgaagtaattcaggaagaaatcatgaaaatcggaaaatcaaga 10432054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 388
Target Start/End: Complemental strand, 19094235 - 19094120
Alignment:
Q  274 tttgtaatgttttctatatttgagtcatgtaattata-ttgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgcaa 371  Q
    |||||||||||||||||||||||||  || ||||||| || ||||| ||| ||||||||| || | |||| || || ||||||| ||| |||||| ||||    
T  19094235 tttgtaatgttttctatatttgagt--tgcaattatattttttccttaaagatagcaattttagggtgttcttaatataattcatgaaaaaatcaagcaa 19094138  T
Q  372 atc-ggcaaagcaagaca 388  Q
    ||| |||||||| |||||    
T  19094137 atcaggcaaagccagaca 19094120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 23975763 - 23975729
Alignment:
Q  339 tgttttgatgtaattcacgaagaaatcatgcaaat 373  Q
    |||||||||||||||||| ||||||||||||||||    
T  23975763 tgttttgatgtaattcacaaagaaatcatgcaaat 23975729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 5676679 - 5676712
Alignment:
Q  127 agttttcttctcttaaaccctaagtaaccatatg 160  Q
    ||||||||||||||||||||||||||| ||||||    
T  5676679 agttttcttctcttaaaccctaagtaatcatatg 5676712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 380
Target Start/End: Complemental strand, 10089621 - 10089561
Alignment:
Q  320 aaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    |||||||| ||||||| | |||||| || ||||||| ||||||||||||||| || |||||    
T  10089621 aaacatagaaattctagggtgttttaatataattcaagaagaaatcatgcaagtctgcaaa 10089561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 15192637 - 15192701
Alignment:
Q  89 tttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaa 153  Q
    ||||||| |||| |||| |||||  ||||| |||||  |||||||||||||||||| ||||||||    
T  15192637 tttgcttgtttttcaaggtggattggtgcaaaaagctcagttttcttctcttaaactctaagtaa 15192701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 5e-44; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 184 - 385
Target Start/End: Original strand, 17469577 - 17469778
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    ||||||||||| |||||  |||||||||||||| |||||||||    |||| ||||||||||||||   ||||| |||||||| || ||| |||||||||    
T  17469577 gttattcttagcatgtttttcaatcattttcagcaggttttaccagcaaaacagaggagtattagagcaattgcctatgattttggaacagttgtaatgt 17469676  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaagaaatcatgcaaatcggcaaagc 382  Q
    ||||||||||||||| |||||||||| || ||||  ||||||||||||| || |||||||| || |||||||||||||||||||||||||| ||||||||    
T  17469677 tttctatatttgagt-atgtaattatgttcttcccaaaacatagcaattttaggatgtttttgaagtaattcacgaagaaatcatgcaaataggcaaagc 17469775  T
Q  383 aag 385  Q
    |||    
T  17469776 aag 17469778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 207 - 388
Target Start/End: Complemental strand, 28254946 - 28254765
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||||||||| |||| |||| |||| || ||||||||| |   ||| |||||||||| ||||||||| |||| |||||||||||||||| |||||||    
T  28254946 tcattttcagtagttttttcatccaaaaaagtggagtattatagcaattacttatgattttgggacatttataatattttctatatttgagtaatgtaat 28254847  T
Q  307 tatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    | || | |||| |||||||||||||||| |  |||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  28254846 tctacttttcccgaaacatagcaattctttagtgttttgatgcaattcacgaagaaatcatgcaaattggcaaagcaagaca 28254765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 164 - 388
Target Start/End: Original strand, 19761580 - 19761803
Alignment:
Q  164 ttgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatga 263  Q
    ||||||| ||||||||||  |||||| |||| |||||  ||| ||||||||||||||||| |||  ||||||| |||| |||||||   ||| ||||| |    
T  19761580 ttgatgacaggtcatcttacgttattattagcatgttattcagtcattttcagtaggtttaacaggaaaaataaaggattattagattaatttcttatta 19761679  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaa 363  Q
    ||| | |||||| |||||||||||||||||| |||| ||||||| |||| ||||  ||||||||||||| || ||||||||| |||||||||||||||||    
T  19761680 ttttgtgacattcgtaatgttttctatatttaagtc-tgtaattctattcttcccaaaacatagcaattttaggatgttttgttgtaattcacgaagaaa 19761778  T
Q  364 tcatgcaaatcggcaaagcaagaca 388  Q
    ||||||| |||||  ||||||||||    
T  19761779 tcatgcatatcggttaagcaagaca 19761803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 167 - 388
Target Start/End: Complemental strand, 26348537 - 26348316
Alignment:
Q  167 atgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgattt 266  Q
    |||| ||||||| ||  |||||||||||||||||  ||| |||||| |||||| ||||||    | || |||||||||||| ||   |||||||||||||    
T  26348537 atgacaggtcattttacgttattcttagtatgtttttcagtcatttccagtagattttaccaacagaacagaggagtattataacatttgcttatgattt 26348438  T
Q  267 cgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgat-gttttgatgtaattcacgaagaaatc 365  Q
    ||| |||||||||||||||||||||||||||| |||||||| |||| ||||  ||| |||||||||||| | | ||||||||||||||||||||||||||    
T  26348437 cggaacatttgtaatgttttctatatttgagt-atgtaattctattcttccaaaaaaatagcaattctagggtggttttgatgtaattcacgaagaaatc 26348339  T
Q  366 atgcaaatcggcaaagcaagaca 388  Q
    |||||||| || ||| |||||||    
T  26348338 atgcaaattggaaaatcaagaca 26348316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 164 - 386
Target Start/End: Original strand, 23387546 - 23387768
Alignment:
Q  164 ttgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatg 262  Q
    ||||||||||||| ||||  ||||||| ||| |||||  ||| ||||||||||||||||||| || ||||||  ||||||||||||||  ||||| ||||    
T  23387546 ttgatgataggtcgtcttatgttattcgtagcatgtttttcagtcattttcagtaggttttagcagcaaaaag-gaggagtattagaacgattgcctatg 23387644  T
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaaga 361  Q
    ||||| | || |||||||||||||||||||||||||| ||||| | || | ||| | ||||||||||||| ||||  | ||||||  |||||||||||||    
T  23387645 atttcagcacttttgtaatgttttctatatttgagtc-tgtaaatctagttttcttaaaacatagcaattttatggggcttttgaaataattcacgaaga 23387743  T
Q  362 aatcatgcaaatcggcaaagcaaga 386  Q
    ||||||||||||||||||| |||||    
T  23387744 aatcatgcaaatcggcaaatcaaga 23387768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 165 - 388
Target Start/End: Complemental strand, 17831790 - 17831567
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| | ||||||||  ||||||||||| |||||  |||  ||||||||||  ||||| |||| | |||| |||||||| ||| | ||||| ||||||    
T  17831790 tgatgacatgtcatcttacgttattcttagcatgtttttcag-cattttcagttagtttttcatccataatataggagtataagata-attgcctatgat 17831693  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgt--aattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaa 362  Q
    |||||||||||||||||| ||||||||||||||||||||  ||||||| | ||||  ||||||||||||| || | ||||||||| || ||||| |||||    
T  17831692 ttcgggacatttgtaatgatttctatatttgagtcatgtaaaattatacttttcccaaaacatagcaattttagggtgttttgatatatttcacaaagaa 17831593  T
Q  363 atcatgcaaatcggcaaagcaagaca 388  Q
    |||||||||||| |||||| ||||||    
T  17831592 atcatgcaaatctgcaaagtaagaca 17831567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 167 - 384
Target Start/End: Complemental strand, 18832317 - 18832100
Alignment:
Q  167 atgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgattt 266  Q
    |||||||||||||||   ||||| |||| |||||  ||| || |||||| ||||||||||    |||| ||||||||||||||   ||||  ||||||||    
T  18832317 atgataggtcatcttacattatttttagcatgtttttcagtctttttcaataggttttaccaacaaaacagaggagtattagagcaattgtctatgattt 18832218  T
Q  267 cgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatc 365  Q
    |||||||||||||||||||||||||||||||| ||||||| | | | ||||  ||| | ||||| | || | |||| |||||||||||||||||||||||    
T  18832217 cgggacatttgtaatgttttctatatttgagt-atgtaatcagagttttcccaaaaaaaagcaaatatagggtgttcttgatgtaattcacgaagaaatc 18832119  T
Q  366 atgcaaatcggcaaagcaa 384  Q
    |||||||||||||||||||    
T  18832118 atgcaaatcggcaaagcaa 18832100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 164 - 387
Target Start/End: Complemental strand, 29988055 - 29987831
Alignment:
Q  164 ttgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatg 262  Q
    ||||||| ||||||||||  |||||| |||| |||||  ||| ||||||| ||||| ||||| || ||||||  | ||||||||||||  ||||| ||||    
T  29988055 ttgatgacaggtcatcttacgttatttttagcatgtttttcagtcatttttagtagattttagcagcaaaaaaggtggagtattagaacgattgcatatg 29987956  T
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaaga 361  Q
    |||||||||| ||||||||||||||||||||| ||| |||||||| || | |||| |||||||| ||||| ||  | | |||||| ||| ||||||||||    
T  29987955 atttcgggacttttgtaatgttttctatattttagt-atgtaattctagttttcccgaaacataacaattttaggggttttttgaagtacttcacgaaga 29987857  T
Q  362 aatcatgcaaatcggcaaagcaagac 387  Q
    |||||||||||||| |||| ||||||    
T  29987856 aatcatgcaaatcgacaaatcaagac 29987831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 234 - 388
Target Start/End: Complemental strand, 18227638 - 18227486
Alignment:
Q  234 atagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattc 333  Q
    ||||||||||||||||   |||||||| |||||||| | |||||||||||||| ||||||||| || ||||||| | || ||||  |||| ||||||||     
T  18227638 atagaggagtattagagcaattgctta-gatttcggaaaatttgtaatgttttttatatttgactc-tgtaattctgttcttcccaaaacctagcaattt 18227541  T
Q  334 tatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    || ||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  18227540 taggatgtttagatgtaattcacgaagaaatcatgcaaatcagcaaagcaagaca 18227486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 384
Target Start/End: Original strand, 24162030 - 24162229
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    ||||||||||| |||||  ||| ||||||||| ||| ||||||    ||||| ||| ||||||||||  ||||| ||||||||| | |||||||||||||    
T  24162030 gttattcttagcatgtttttcagtcattttcaatagattttaccagcaaaatggagaagtattagaataattgcctatgatttcagaacatttgtaatgt 24162129  T
Q  284 tttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagc 382  Q
    |||||||||||||||| ||||||||| || |||   ||||||| ||||| || |||| |||||||||||||||| || ||||||||||||| ||||||||    
T  24162130 tttctatatttgagtc-tgtaattatgttcttctcaaaacataacaattttaggatgtttttgatgtaattcac-aaaaaatcatgcaaattggcaaagc 24162227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 163 - 386
Target Start/End: Original strand, 24658297 - 24658520
Alignment:
Q  163 attgatgataggtcatcttgagttattcttag-tatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgctta 260  Q
    |||||||| ||||||||||  |||||| |||  | ||||  ||||||||||| ||||||||||| || ||||||  |||||||||||| || || || ||    
T  24658297 attgatgaaaggtcatcttacgttatttttaactttgtttttcaatcatttttagtaggttttagcagcaaaaag-gaggagtattagtaagatagccta 24658395  T
Q  261 tgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaag 360  Q
    |||||||  ||| ||||||||||||||||||||||||| |||||||| || | |||| |||||| | ||||| || |  ||||||| |||||||| ||||    
T  24658396 tgatttcaagacttttgtaatgttttctatatttgagt-atgtaattttagttttcccgaaacacaacaattttagggagttttgaagtaattcatgaag 24658494  T
Q  361 aaatcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||||||||||| |||||    
T  24658495 aaatcatgcaaatcggcaaatcaaga 24658520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 184 - 386
Target Start/End: Original strand, 19003784 - 19003986
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatg 282  Q
    ||||||||| | |||||  ||| | ||||||||||||||||| || ||||||  || |||||||||||  ||||  ||||||||| |||| |||||||||    
T  19003784 gttattcttggcatgtttttcagttattttcagtaggttttagcagcaaaaag-gatgagtattagaacaattgtctatgatttcaggacttttgtaatg 19003882  T
Q  283 ttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaagaaatcatgcaaatcggcaaag 381  Q
    ||||||||||||||||| ||||||| || | |||| |||||||| ||||| || |  ||||| || |||||||||||||||||||||||||||||||||     
T  19003883 ttttctatatttgagtc-tgtaattctagttttcccgaaacataacaattttagggggtttttgaagtaattcacgaagaaatcatgcaaatcggcaaat 19003981  T
Q  382 caaga 386  Q
    |||||    
T  19003982 caaga 19003986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 184 - 386
Target Start/End: Complemental strand, 19053179 - 19052977
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggtttt-acatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatg 282  Q
    ||||||||||| ||||| |||| | ||||||||||| |||| ||| ||||||  ||||||||||||||  ||||| ||| |||||||||| |||||||||    
T  19053179 gttattcttagcatgtttatcagttattttcagtagatttttacagcaaaaag-gaggagtattagaacaattgcctataatttcgggacttttgtaatg 19053081  T
Q  283 ttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaag 381  Q
     ||||||||||||| || ||||||| || | ||||  ||||||||||||| ||  |  ||||||| ||||||||||||||||||||||||||| |||||     
T  19053080 atttctatatttgactc-tgtaattctagttttcccaaaacatagcaattttaggggggttttgaagtaattcacgaagaaatcatgcaaatctgcaaat 19052982  T
Q  382 caaga 386  Q
    |||||    
T  19052981 caaga 19052977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 253 - 388
Target Start/End: Original strand, 25572550 - 25572685
Alignment:
Q  253 attgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgt-aa 351  Q
    |||||||||||||| |||||||||||  |||||| |||||||||||| |||||||||||| ||||  ||||||| ||||| || ||||||||| ||| ||    
T  25572550 attgcttatgatttagggacatttgtcttgttttttatatttgagtc-tgtaattatattattcccaaaacatatcaattttaggatgttttgttgtaaa 25572648  T
Q  352 ttcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  25572649 ttcacgaagaaatcatgcatatcgacaaagcaagaca 25572685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 162 - 376
Target Start/End: Complemental strand, 26122482 - 26122268
Alignment:
Q  162 tattgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttat 261  Q
    ||||||||| |||| ||||| | |||||||||| |||||  | | || |||| ||||||||||||    |||| ||||||||||||||   ||||  |||    
T  26122482 tattgatgacaggttatcttaaattattcttagcatgttttttagtcgtttttagtaggttttaccagcaaaacagaggagtattagagcaattgtctat 26122383  T
Q  262 gatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaag 360  Q
    |||||||||||||||||||| |||  |||||||| ||| ||||||||| || ||||||||||||||||||| || | || ||||||||||||||| || |    
T  26122382 gatttcgggacatttgtaatttttaatatatttgtgtc-tgtaattatgttcttcctgaaacatagcaattttaaggtgtttttgatgtaattcatgacg 26122284  T
Q  361 aaatcatgcaaatcgg 376  Q
    ||||| ||||||||||    
T  26122283 aaatcttgcaaatcgg 26122268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 386
Target Start/End: Original strand, 19006914 - 19007070
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    ||||| ||||||||||||||  ||||| |||||||||||||| |||||||||||||||||||||||||| ||||||| || | |||   |||||||||||    
T  19006914 aaaatggaggagtattagaacgattgcctatgatttcgggacttttgtaatgttttctatatttgagtc-tgtaattctaattttctcaaaacatagcaa 19007012  T
Q  331 ttctat--gatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    ||  ||  | |||||| | ||||||||||||||||| ||||||||||||||| |||||    
T  19007013 tttgatggggtgttttaaagtaattcacgaagaaattatgcaaatcggcaaatcaaga 19007070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 172 - 388
Target Start/End: Complemental strand, 34488947 - 34488730
Alignment:
Q  172 aggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcggga 271  Q
    ||||||||||  ||||||||||| |||||  ||| ||||||| |||||| |||||    |||| ||| ||||||||||   |||||  ||||||| ||||    
T  34488947 aggtcatcttacgttattcttagcatgtttttcagtcatttttagtaggatttaccagcaaaacagatgagtattagatcaattgccaatgatttaggga 34488848  T
Q  272 catttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgca 370  Q
     ||||||| || ||||||||||||||| |||||||| |||| ||||||||||||||||||| || | |||| |||||||||||||| ||||||||| |||    
T  34488847 aatttgtattgatttctatatttgagt-atgtaattgtattcttcctgaaacatagcaattttagggtgttcttgatgtaattcacaaagaaatcaagca 34488749  T
Q  371 aatc-ggcaaagcaagaca 388  Q
     ||| |||||| |||||||    
T  34488748 tatcaggcaaaacaagaca 34488730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 240 - 388
Target Start/End: Complemental strand, 18939542 - 18939394
Alignment:
Q  240 gagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgat 339  Q
    ||||||||||   ||||| ||||||||||||||||||||| |||||| |||||| |||| ||||||| | | | ||||  ||||||||||||| || | |    
T  18939542 gagtattagagtaattgcatatgatttcgggacatttgtagtgttttatatattagagt-atgtaatcagagttttcccaaaacatagcaattttagggt 18939444  T
Q  340 gtt-ttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    ||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  18939443 gttcttgatgtaattcacgaagaaatcatgcaaatcgacaaagcaagaca 18939394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 226 - 386
Target Start/End: Complemental strand, 24142442 - 24142283
Alignment:
Q  226 catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacat 325  Q
    ||||||||| |||||||||||||||| ||| | ||||||||||| || ||||||| |||||||||||||||||| ||||||| || | |||| |||||||    
T  24142442 catcaaaaa-agaggagtattagaaagatttcctatgatttcggtacttttgtaaagttttctatatttgagtc-tgtaattctagttttcccgaaacat 24142345  T
Q  326 agcaattcta-tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    ||||||| ||  |  |||||||  |||||||||||||||||||| ||||||||||| |||||    
T  24142344 agcaattttaggggggttttgaaataattcacgaagaaatcatggaaatcggcaaatcaaga 24142283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 165 - 386
Target Start/End: Complemental strand, 20860436 - 20860215
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| ||||||||||  |||| | |||| |||||  ||| | ||||||||||||||||| || ||||||  ||| ||||||||||  ||||| |||||    
T  20860436 tgatgacaggtcatcttacgttactgttagcatgtttttcattaattttcagtaggttttagcagcaaaaag-gagaagtattagaacaattgcctatga 20860338  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaa 362  Q
    ||| ||||| |||||||| ||||||||||||||||| ||||||| || | |||  |||||||||||||| || |  | |||||| |||||||||||| ||    
T  20860337 ttttgggacttttgtaatattttctatatttgagtc-tgtaattctagttttctcgaaacatagcaattttagggggtttttgaagtaattcacgaataa 20860239  T
Q  363 atcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||||| ||| |||||    
T  20860238 atcatgcaaatcggaaaatcaaga 20860215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 185 - 380
Target Start/End: Complemental strand, 29799121 - 29798926
Alignment:
Q  185 ttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgtt 284  Q
    ||||||||||||||||  | | ||||||| | |||||| |||    ||||||||||||||| ||||  ||||  |||||||  ||||||||| |||||||    
T  29799121 ttattcttagtatgttttttagtcatttttaataggttctaccagcaaaatagaggagtataagaacaattgtctatgattctgggacatttataatgtt 29799022  T
Q  285 ttctatatttgagtcatgtaattatattgttcctgaaacatagcaattct--atgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    ||||||||||||||  |||||||||||| ||||  ||||||||||||| |  |  || ||||||||||||||||||||||||||| ||||||||||||    
T  29799021 ttctatatttgagt-ttgtaattatattcttcccaaaacatagcaattatggagtat-ttttgatgtaattcacgaagaaatcatacaaatcggcaaa 29798926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 165 - 388
Target Start/End: Original strand, 31600075 - 31600298
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| ||||| ||||  ||||||||||| |||||  | | || ||||| |||||||||||    |||| ||| ||||||||||   ||||  ||||||    
T  31600075 tgatgacaggtcctcttacgttattcttagcatgtttttaagtctttttccgtaggttttaccaacaaaacagaagagtattagagtaattgtctatgat 31600174  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg--ttttgatgtaattcacgaagaa 362  Q
    ||||||||||||||||| ||||||||||||||||  |||||| | | | |||| | |||||||||||| || | ||  |||| |||||||| ||||||||    
T  31600175 ttcgggacatttgtaatattttctatatttgagt-ttgtaatcagagttttcccg-aacatagcaattttagggtgtttttttatgtaatttacgaagaa 31600272  T
Q  363 atcatgcaaatcggcaaagcaagaca 388  Q
    ||||||||||||||||||||||||||    
T  31600273 atcatgcaaatcggcaaagcaagaca 31600298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 185 - 380
Target Start/End: Complemental strand, 26117514 - 26117319
Alignment:
Q  185 ttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgtt 284  Q
    |||||||||| |||||  | |||||||||||| ||||||||||   | || ||| |||| ||||||  |||||||||||||||||||| || ||||||||    
T  26117514 ttattcttagcatgttttttaatcattttcagcaggttttacaagcagaagagatgagttttagaacaattgcttatgatttcgggacgttagtaatgtt 26117415  T
Q  285 ttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgt-aattcacgaagaaatcatgcaaatcggcaaa 380  Q
    || |||||||||||| ||||||| | || ||||  ||||||||||||| |  | ||||||  ||| ||||||||||||||||||| | |||||||||    
T  26117414 ttttatatttgagtc-tgtaattctgttcttcccaaaacatagcaatttttgggtgttttattgtaaattcacgaagaaatcatgtatatcggcaaa 26117319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 233 - 388
Target Start/End: Original strand, 107728 - 107881
Alignment:
Q  233 aatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaatt 332  Q
    ||||||||||||||||||  |||||||| ||||| ||  ||||||||||||||| |||||| |||||||||| || |||| |||||||||||||| || |    
T  107728 aatagaggagtattagaacaattgcttacgattttggagcatttgtaatgttttttatattcgagtcatgtagttgtatt-ttcctgaaacatagaaact 107826  T
Q  333 ctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
     || | ||||||||||| |||||| |||||||| | |||||  |||||||||||||    
T  107827 ttagggtgttttgatgtgattcacaaagaaatcgtacaaat-tgcaaagcaagaca 107881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 167 - 388
Target Start/End: Original strand, 24263752 - 24263974
Alignment:
Q  167 atgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgattt 266  Q
    |||||||||||||||  ||||||||||| |||||  ||| ||  ||| ||||||||||||    |||  |||||| ||||| |   ||| | ||||||||    
T  24263752 atgataggtcatcttacgttattcttagcatgtttttcagtctattttagtaggttttaccaacaaatcagaggattattatatcaatttcctatgattt 24263851  T
Q  267 cgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatc 365  Q
     |||||||||||||||||||||||||||||||| ||||||| |||| || |  ||||||||||||| || | |||| |||||||||||||| ||||||||    
T  24263852 tgggacatttgtaatgttttctatatttgagtc-tgtaattctattctttccaaaacatagcaattttagggtgttcttgatgtaattcacaaagaaatc 24263950  T
Q  366 atgcaaatc-ggcaaagcaagaca 388  Q
    | | ||||| ||||| ||||||||    
T  24263951 aagaaaatcaggcaatgcaagaca 24263974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 231 - 382
Target Start/End: Complemental strand, 28280314 - 28280162
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttc-gggacattt-gtaatgttttctatatttgagtcatgtaattatattgttcct-gaaacatag 327  Q
    ||||||||||||||||||||  ||||  |||| |||  ||||||||| ||||||||||  |||||||||| ||||||||||| | || || ||||||||     
T  28280314 aaaatagaggagtattagaacaattgtctatggtttttgggacattttgtaatgtttt--atatttgagttatgtaattatagtttttctagaaacataa 28280217  T
Q  328 caattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagc 382  Q
    ||||||||   ||||||||||||||||| ||||||||||||||||||||||||||    
T  28280216 caattctagagtgttttgatgtaattcaagaagaaatcatgcaaatcggcaaagc 28280162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 210 - 384
Target Start/End: Complemental strand, 24262119 - 24261944
Alignment:
Q  210 ttttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattat 309  Q
    |||||||||||||||||    |||| |||||||||||||| |  || | ||||||||| | ||||||||||||||||||||||||||||  |||||||||    
T  24262119 ttttcagtaggttttactagcaaaacagaggagtattagacaattttcctatgatttcagaacatttgtaatgttttctatatttgagt-ttgtaattat 24262021  T
Q  310 attgttcctgaaacatagcaattctatgatg--ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
     || || | ||||||||||||||  | ||||  |||| |||||||||||||||||||||  ||||||  ||||||||    
T  24262020 gttctttcagaaacatagcaatttaaggatgtttttttatgtaattcacgaagaaatcacacaaatcaccaaagcaa 24261944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 175 - 386
Target Start/End: Complemental strand, 28666579 - 28666368
Alignment:
Q  175 tcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggaca 273  Q
    |||||||  ||||||||||  |||||  ||| ||||||||||||||||||| || ||||||  ||| ||||||||||  | ||| |||||||| |||||     
T  28666579 tcatcttatgttattcttatcatgtttttcattcattttcagtaggttttagcagcaaaaag-gagaagtattagaatgactgcctatgattttgggact 28666481  T
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaa 372  Q
    ||||||||||||| |||||||||||| ||||||| || | |||| |||||||| ||||| || || | |||| | ||||||||| |||||||| ||||||    
T  28666480 tttgtaatgttttttatatttgagtc-tgtaattttagttttcccgaaacatatcaattttaggaggtttttaaagtaattcacaaagaaatcctgcaaa 28666382  T
Q  373 tcggcaaagcaaga 386  Q
    |||| ||| |||||    
T  28666381 tcggaaaatcaaga 28666368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 253 - 388
Target Start/End: Original strand, 22845883 - 22846019
Alignment:
Q  253 attgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaa 351  Q
    ||||| ||||||||  |||||||| |||||||||||||||||||||  ||||||| |||| ||||  ||||||||||||| || | |||| |||||||||    
T  22845883 attgcctatgatttttggacatttataatgttttctatatttgagt-ttgtaattctattcttcccaaaacatagcaattttagggtgttcttgatgtaa 22845981  T
Q  352 ttcacgaagaaatcatgcaaatc-ggcaaagcaagaca 388  Q
    |||||||||| |||| ||||||| || |||||||||||    
T  22845982 ttcacgaagagatcaagcaaatcaggaaaagcaagaca 22846019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 231 - 374
Target Start/End: Original strand, 24513252 - 24513395
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    |||| |||||||||||||| |  |||| |||||||| ||||||||||||||||||| ||||||||| |  ||||||| || | |||| |||||||| |||    
T  24513252 aaaaaagaggagtattagagaatttgcctatgattttgggacatttgtaatgttttatatatttgaat-ttgtaattctagttttcccgaaacatatcaa 24513350  T
Q  331 ttctatgatg-ttttgatgtaattcacgaagaaatcatgcaaatc 374  Q
    || || |  | |||||| |||||||||||||||||||||||||||    
T  24513351 ttttagggggtttttgaagtaattcacgaagaaatcatgcaaatc 24513395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 207 - 380
Target Start/End: Original strand, 24320564 - 24320737
Alignment:
Q  207 tcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaa 305  Q
    ||||||||||||||||||| || ||||||  | |||||||||| |  ||| | || ||||||||||| | || ||| ||||||||||||||||| ||| |    
T  24320564 tcattttcagtaggttttagcagcaaaaag-gcggagtattagcacgatttcctacgatttcgggacttctgaaattttttctatatttgagtc-tgtca 24320661  T
Q  306 ttatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    || || | |||| |||||||| ||||| || | |||||| || |||||||||||||||||||||||||||||||||    
T  24320662 ttctagttttcccgaaacatatcaattttagggtgtttttgaagtaattcacgaagaaatcatgcaaatcggcaaa 24320737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 207 - 373
Target Start/End: Complemental strand, 25920886 - 25920721
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    |||||||||||||| |||||    ||||  || ||||||||||   ||||| ||||||||||||||| |||||| | |||||||||||||||  |||||     
T  25920886 tcattttcagtaggatttaccagcaaaacggatgagtattagagcaattgcctatgatttcgggacaattgtaaggctttctatatttgagt-ttgtaa- 25920789  T
Q  307 tatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaagaaatcatgcaaat 373  Q
    | |||| |||| |||||||| |||||| | | |||||| |||||||||||||||||||||||||||||    
T  25920788 tctattcttcccgaaacataacaattccagggtgttttggatgtaattcacgaagaaatcatgcaaat 25920721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 299
Target Start/End: Complemental strand, 26253570 - 26253455
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgt 283  Q
    ||||||||||  |||||  |||||||||||||| | |||||||||| | ||||||||||||||| |   ||||||||||||||| | ||||||||||| |    
T  26253570 gttattcttaacatgtttttcaatcattttcagcaagttttacatccacaatagaggagtattaaagcaattgcttatgatttcagaacatttgtaatat 26253471  T
Q  284 tttctatatttgagtc 299  Q
    |||||||| |||||||    
T  26253470 tttctatacttgagtc 26253455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 231 - 386
Target Start/End: Original strand, 16521969 - 16522125
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    ||||| ||||||||||||||  ||||| |||||||| ||||| |||| |||||||||||||||||| || ||||||| || | |||| ||||||||||||    
T  16521969 aaaatggaggagtattagaacgattgcctatgattttgggacttttgcaatgttttctatatttgaatc-tgtaattctagttttcccgaaacatagcaa 16522067  T
Q  331 tt--ctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    ||      |  ||||||| |||||||| |||||||||||||||||||| ||| |||||    
T  16522068 tttggaggggggttttgaagtaattcatgaagaaatcatgcaaatcggaaaatcaaga 16522125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 381
Target Start/End: Original strand, 24849666 - 24849782
Alignment:
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaa 363  Q
    |||||| |||||| |||| ||||||||||||||||| ||||||| | || |||| ||||||||| |||| || ||| | ||||||||||||| |||||||    
T  24849666 tttcggaacatttttaatattttctatatttgagtc-tgtaattttgttcttccggaaacatagaaattttaggatttattgatgtaattcatgaagaaa 24849764  T
Q  364 tcatgcaaatcggcaaag 381  Q
    ||||||| ||| ||||||    
T  24849765 tcatgcatatcagcaaag 24849782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 231 - 386
Target Start/End: Original strand, 20548519 - 20548673
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    ||||| ||||||||||||||  ||||| | |||||||||||| |||||||| ||||||||||||| ||| ||||||| || | |||| |||||||||||     
T  20548519 aaaatggaggagtattagaacgattgcctgtgatttcgggacttttgtaat-ttttctatatttgtgtc-tgtaattctagttttcccgaaacatagcag 20548616  T
Q  331 ttcta-tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    ||  |  | | |||||| |||||||||| |||||||||||||||||| ||| |||||    
T  20548617 tttgaggggttttttgaagtaattcacggagaaatcatgcaaatcggaaaatcaaga 20548673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 374
Target Start/End: Original strand, 25400735 - 25400945
Alignment:
Q  162 tattgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgctta 260  Q
    ||||||||| ||||||| ||  ||||||||||| |||||  ||| ||||||||| ||||||||| ||  |||||  ||||| ||||||||  ||||  |     
T  25400735 tattgatgagaggtcattttacgttattcttagcatgtttttcagtcattttcattaggttttagcaggaaaaag-gaggaatattagaacgattg--tc 25400831  T
Q  261 tgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatg-atgttttgatgtaattcacgaa 359  Q
    |||||||||||| ||||||||||||| |||||||||||  ||||||| || | |||| |||||||||||||| || |   | ||||| |||||||| |||    
T  25400832 tgatttcgggacctttgtaatgttttatatatttgagt-ttgtaattctaattttcccgaaacatagcaattttaggtgggatttgaagtaattcatgaa 25400930  T
Q  360 gaaatcatgcaaatc 374  Q
    |||||| ||||||||    
T  25400931 gaaatcgtgcaaatc 25400945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 386
Target Start/End: Complemental strand, 34132139 - 34131962
Alignment:
Q  209 attttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaatt 307  Q
    ||||||| ||||||||| || ||||||  ||| ||||||||||  | ||| |||||||||||||| |||||||| |||||||| | |||||| |||||||    
T  34132139 attttcattaggttttagcagcaaaaag-gagaagtattagaacgactgcctatgatttcgggacttttgtaatattttctatgtctgagtc-tgtaatt 34132042  T
Q  308 atattgttcctgaaacatagcaattctatga-tgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
     || | |||  |||||||||||||| || |  | |||||| |||||||||||||||||||| ||||||| |||| |||||    
T  34132041 ctagttttcacgaaacatagcaattttaggggttttttgaagtaattcacgaagaaatcatacaaatcgtcaaatcaaga 34131962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 380
Target Start/End: Original strand, 17336474 - 17336540
Alignment:
Q  314 ttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    ||||||||||||| |||||||| | ||||||||||||||||| ||| ||||||||||||||||||||    
T  17336474 ttcctgaaacatatcaattctagggtgttttgatgtaattcaagaataaatcatgcaaatcggcaaa 17336540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 165 - 380
Target Start/End: Original strand, 23214825 - 23215042
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatga 263  Q
    |||||| ||||||||||  ||||||||||| |||||  ||| | ||||||| ||   |||| || ||||||  ||||||||| ||| | ||||| |||||    
T  23214825 tgatgacaggtcatcttacgttattcttagcatgtttttcagttattttcaatacagtttagcaacaaaaag-gaggagtatgagagaaattgcctatga 23214923  T
Q  264 tttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta-tg--atgttttgatgtaattcacgaag 360  Q
    |||||||||  ||||||||||||| |||||||| | |||||||| || | |||| |||||||||||||| || ||   | |||| | ||||||||| |||    
T  23214924 tttcgggactattgtaatgttttccatatttga-ttatgtaattctagttttcccgaaacatagcaattttagtggtttttttttaagtaattcacaaag 23215022  T
Q  361 aaatcatgcaaatcggcaaa 380  Q
    | ||||||||||||||||||    
T  23215023 agatcatgcaaatcggcaaa 23215042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 23266832 - 23266776
Alignment:
Q  240 gagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttga 296  Q
    |||||||| | | ||||||||||||||||||||||||||||||||||||||||||||    
T  23266832 gagtattacagaaattgcttatgatttcgggacatttgtaatgttttctatatttga 23266776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 377
Target Start/End: Complemental strand, 26253430 - 26253354
Alignment:
Q  301 tgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggc 377  Q
    ||||||| |||| ||| | ||||||||||||| || | ||||||||||||||||||||| |||||||||||||||||    
T  26253430 tgtaattctattcttcatcaaacatagcaattttagggtgttttgatgtaattcacgaaaaaatcatgcaaatcggc 26253354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 318 - 384
Target Start/End: Complemental strand, 15520920 - 15520853
Alignment:
Q  318 tgaaacatagcaattctatgatgtttt-gatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    ||||| ||||||||| |||| |||||| ||||||||||| ||||||||||||||||||||||||||||    
T  15520920 tgaaatatagcaattttatggtgtttttgatgtaattcaagaagaaatcatgcaaatcggcaaagcaa 15520853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 88 - 155
Target Start/End: Original strand, 22230153 - 22230220
Alignment:
Q  88 ttttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaacc 155  Q
    ||||| |||||||||||||||| || ||||| |||||| |||||||||||| ||||||||||||||||    
T  22230153 ttttggttattttccaagctgggtcggtgcaaaaagcccagttttcttctcataaaccctaagtaacc 22230220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 207 - 300
Target Start/End: Complemental strand, 24188953 - 24188860
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtca 300  Q
    ||||||| ||||||||||| |   | |||||||||||||||||   ||||  |||||||||| |||| ||||||||||||||||||||||||||    
T  24188953 tcatttttagtaggttttaaaaggagaatagaggagtattagagcaattgaatatgatttcgagacaattgtaatgttttctatatttgagtca 24188860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 351
Target Start/End: Original strand, 23115060 - 23115151
Alignment:
Q  259 tatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaa 351  Q
    ||||||||| ||| |||||||||||||||||||||||||||| || ||| | || ||||| ||||||| ||||| ||  ||||||||||||||    
T  23115060 tatgatttcaggatatttgtaatgttttctatatttgagtca-gtgattttgttcttcctaaaacataacaattttagcatgttttgatgtaa 23115151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 26315211 - 26315105
Alignment:
Q  236 agaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattcta 335  Q
    |||||||||||||||   ||||||||||||| | ||||||||||||||||||||| |||||||  ||||||| | || |||| || ||||||||||| ||    
T  26315211 agaggagtattagaacggttgcttatgattttgagacatttgtaatgttttctat-tttgagt-ttgtaattctgttattcccgatacatagcaatttta 26315114  T
Q  336 tgatgtttt 344  Q
     ||||||||    
T  26315113 ggatgtttt 26315105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 386
Target Start/End: Complemental strand, 23338883 - 23338817
Alignment:
Q  320 aaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    ||||||||||||| |||   ||||| | ||||||||||||||||||||||||||||||||| |||||    
T  23338883 aaacatagcaattttatagggttttaaagtaattcacgaagaaatcatgcaaatcggcaaatcaaga 23338817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 207 - 293
Target Start/End: Complemental strand, 26069304 - 26069218
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatt 293  Q
    ||||||||||||| ||||||    | || |||||||||||||||  ||||||||||||||| | ||||||||||| |||||||||||    
T  26069304 tcattttcagtagattttaccagcagaacagaggagtattagaacaattgcttatgatttcagaacatttgtaatattttctatatt 26069218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 22755367 - 22755444
Alignment:
Q  87 attttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaaccatatgttat 164  Q
    ||||||||| |||||||||||||||||||| |||||||| | || | ||||||||| || |||||||||  |||||||    
T  22755367 attttgcttgttttccaagctggatcagtggataaagcccaattcttttctcttaacccataagtaacctaatgttat 22755444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 386
Target Start/End: Original strand, 22797606 - 22797649
Alignment:
Q  343 ttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |||| ||||||||||||||||||||||||||||||||| |||||    
T  22797606 ttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaaga 22797649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 23338988 - 23338928
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta 225  Q
    |||||| ||||||||||  ||||||||||| |||||  ||||||||||||| |||||||||    
T  23338988 tgatgacaggtcatcttaggttattcttagcatgtttttcaatcattttcattaggtttta 23338928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 24842113 - 24842169
Alignment:
Q  92 gcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaacccta 148  Q
    |||| |||||||||||||||| ||||| ||||| ||| ||||||||| |||||||||    
T  24842113 gcttgttttccaagctggatcggtgcaaaaagcttagctttcttctcctaaacccta 24842169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 26329753 - 26329702
Alignment:
Q  97 ttttccaagctggatcagtgcataaagcctagttttcttctcttaaacccta 148  Q
    |||||||||||||||| ||||| |||||  |||||||||||| |||||||||    
T  26329753 ttttccaagctggatcggtgcaaaaagctcagttttcttctcctaaacccta 26329702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 22797508 - 22797561
Alignment:
Q  253 attgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaatt 307  Q
    ||||| ||||||||||| || ||||||||||||||||||||| ||| ||||||||    
T  22797508 attgcctatgatttcggaacttttgtaatgttttctatatttaagt-atgtaatt 22797561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 342 - 384
Target Start/End: Original strand, 24807369 - 24807411
Alignment:
Q  342 tttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 384  Q
    |||||||||||||| |||||||| |||||||||||||| ||||    
T  24807369 tttgatgtaattcaagaagaaattatgcaaatcggcaatgcaa 24807411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 17028707 - 17028736
Alignment:
Q  124 cctagttttcttctcttaaaccctaagtaa 153  Q
    ||||||||||||||||||||||||||||||    
T  17028707 cctagttttcttctcttaaaccctaagtaa 17028736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 164 - 386
Target Start/End: Complemental strand, 4922 - 4700
Alignment:
Q  164 ttgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatg 262  Q
    ||||||||||||| ||||  ||||||| ||| |||||  ||| ||||||||||||||||||| || ||||||  ||||||||||||||  ||||| ||||    
T  4922 ttgatgataggtcgtcttatgttattcgtagcatgtttttcagtcattttcagtaggttttagcagcaaaaag-gaggagtattagaacgattgcctatg 4824  T
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaaga 361  Q
    ||||| | || |||||||||||||||||||||||||| ||||| | || | ||| | ||||||||||||| ||||  | ||||||  |||||||||||||    
T  4823 atttcagcacttttgtaatgttttctatatttgagtc-tgtaaatctagttttcttaaaacatagcaattttatggggcttttgaaataattcacgaaga 4725  T
Q  362 aatcatgcaaatcggcaaagcaaga 386  Q
    ||||||||||||||||||| |||||    
T  4724 aatcatgcaaatcggcaaatcaaga 4700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 165 - 374
Target Start/End: Complemental strand, 41435 - 41227
Alignment:
Q  165 tgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgat 264  Q
    |||||| || ||||||| |||||||||||| |||||  ||| | ||||| ||||||||||||    |||| ||||||||||||||   ||||| ||||||    
T  41435 tgatgacagctcatctt-agttattcttagcatgtttttcagttatttttagtaggttttaccagcaaaacagaggagtattagatcaattgcctatgat 41337  T
Q  265 ttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaa 363  Q
    ||| | |||||||||||||||||||||||| |||| ||||||| |||| |||| |||||||  ||||| || | |||| |||||||||||||||||||||    
T  41336 ttcagaacatttgtaatgttttctatatttaagtc-tgtaattctattattccagaaacattacaattttagggtgttcttgatgtaattcacgaagaaa 41238  T
Q  364 tcatgcaaatc 374  Q
    |||||||||||    
T  41237 tcatgcaaatc 41227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 207 - 388
Target Start/End: Original strand, 16509 - 16689
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||| |||||||||||||   | |||||| || |||||||   |||| |||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  16509 tcatttttagtaggttttacaagcagaatagatgaatattagatcaattgtttatgatttcgggacatttgtaatattttctacatttgagtc-tgtaat 16607  T
Q  307 tatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaca 388  Q
    | ||||  |||||||||||| |||||  | ||||||||| || |||||||||||||||||| || |||| ||||||||||||    
T  16608 tctattcctcctgaaacataacaatttaaggatgttttgttgaaattcacgaagaaatcatacatatcgacaaagcaagaca 16689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 175 - 376
Target Start/End: Complemental strand, 12317 - 12117
Alignment:
Q  175 tcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacat 274  Q
    |||||| | ||||||||||| |||||  ||||||| ||| ||||||||||||||| | |||||| ||||||| ||   |||||||||| ||| |||||||    
T  12317 tcatctagcgttattcttagcatgtttttcaatcaattttagtaggttttacatcgagaatagatgagtattggagcaattgcttatgtttttgggacat 12218  T
Q  275 ttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatc 374  Q
    | || |||||||||||||||||||| | ||||| |||| ||||  ||| |||| ||||  |   ||||||| |||||||||||||||||||||||| |||    
T  12217 tagtcatgttttctatatttgagtc-tctaattctattcttcccaaaagatagaaatttaagcgtgttttgttgtaattcacgaagaaatcatgcatatc 12119  T
Q  375 gg 376  Q
    ||    
T  12118 gg 12117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 207 - 386
Target Start/End: Original strand, 243872 - 244051
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||| ||||||||||||    |||| ||||||||||||||   ||||  ||| |||||  || |||||||||||||||||||||||| | |||||||    
T  243872 tcattttaagtaggttttactagcaaaacagaggagtattagagcaattgtctattatttcatgatatttgtaatgttttctatatttgaat-atgtaat 243970  T
Q  307 tatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    | |||| |||| |||||||||||||| ||   |||||| |||||||||||| |||||||||||||||||| ||||||||||    
T  243971 tctattcttcccgaaacatagcaattttagtgtgtttttgatgtaattcacaaagaaatcatgcaaatcgtcaaagcaaga 244051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 231 - 387
Target Start/End: Complemental strand, 95655 - 95499
Alignment:
Q  231 aaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaa 330  Q
    |||| |||||||||||||||  ||||| ||||||||  || | ||||||| ||||||||||||||| || ||||||| || | ||||||||||||| |||    
T  95655 aaaaaagaggagtattagaacgattgcctatgattttagggcttttgtaaagttttctatatttgaatc-tgtaattctagttttcctgaaacataacaa 95557  T
Q  331 ttctatgatgtttt-gatgtaattcacgaagaaatcatgcaaatcggcaaagcaagac 387  Q
    || || ||  |||| || ||||||||||||||||||||||||||||||||| ||||||    
T  95556 ttttaagagatttttgaagtaattcacgaagaaatcatgcaaatcggcaaaccaagac 95499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 237 - 380
Target Start/End: Complemental strand, 5755 - 5612
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    ||||||||||||||  ||||  |||||||| ||||| |||||||||||||||||||||||| | ||||||| || | ||||||||| | ||||||| |||    
T  5755 gaggagtattagaacaattgtctatgattttgggacttttgtaatgttttctatatttgagac-tgtaattctagttttcctgaaatagagcaattttat 5657  T
Q  337 -gatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
     |  ||||| | |||||||||||||||||||||||||||||||||    
T  5656 aggggttttaaagtaattcacgaagaaatcatgcaaatcggcaaa 5612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 207 - 388
Target Start/End: Original strand, 10135 - 10315
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||||||||||||||||    |||| ||||||||||||||   ||||  |||||||||   ||||||||| ||||||||||||||||||  ||||||    
T  10135 tcattttcagtaggttttactagcaaaacagaggagtattagatcaattgtctatgatttcataacatttgtattgttttctatatttgagt-ttgtaat 10233  T
Q  307 tatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaatc-ggcaaagcaagaca 388  Q
    | |||| ||||||||||  ||||||| || | |||| |||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  10234 tctattcttcctgaaac--agcaattttagggtgttcttgatgtaattcacgaagaaatcaagcaaatcaggcaaagaaagaca 10315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 237 - 380
Target Start/End: Original strand, 20324 - 20466
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    ||||||||||||||  ||||| |||||||||||||| || |||||||||||||||||||||| |||||||| || | ||||  |||||||||||||  |     
T  20324 gaggagtattagaacgattgcctatgatttcgggac-ttggtaatgttttctatatttgagt-atgtaattctagttttcccaaaacatagcaatttgag 20421  T
Q  337 gatg-ttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
    |  | |||||| |||||||||||||||||||||||||||||||||    
T  20422 ggggtttttgaagtaattcacgaagaaatcatgcaaatcggcaaa 20466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 237 - 380
Target Start/End: Complemental strand, 23061 - 22918
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattct-a 335  Q
    ||||||||||||||  ||||| |||| ||||||||| ||| |||||||||||||||||||||| ||||||| || | |||| |||||||||||||| | |    
T  23061 gaggagtattagaacgattgcctatggtttcgggacttttttaatgttttctatatttgagtc-tgtaattctagttttcccgaaacatagcaattataa 22963  T
Q  336 tgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaa 380  Q
     ||  |||||| ||| |||||||||||||||||||||| ||||||    
T  22962 ggagtttttgaagtatttcacgaagaaatcatgcaaattggcaaa 22918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 184 - 376
Target Start/End: Complemental strand, 6531 - 6339
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatg 282  Q
    ||||||||||| |||||  ||| | ||||||| |||| |||| || ||||||| ||||||||||||||  || |  ||||||||| |||  |||||||||    
T  6531 gttattcttagcatgtttttcagttattttcaataggatttagcaacaaaaat-gaggagtattagaacgatcgtctatgatttcaggatttttgtaatg 6433  T
Q  283 ttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtttt-gatgtaattcacgaagaaatcatgcaaatcgg 376  Q
    ||||||||||||||||| ||||| | || | ||||||||| ||||||||| || | | |||| || |||||||||||||||||||||||||||||    
T  6432 ttttctatatttgagtc-tgtaactctagttttcctgaaatatagcaattatagggtttttttgaagtaattcacgaagaaatcatgcaaatcgg 6339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1017 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold1017
Description:

Target: scaffold1017; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 243 - 370
Target Start/End: Complemental strand, 618 - 491
Alignment:
Q  243 tattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-t 341  Q
    ||||||||  ||||||||||||||||| |||||| ||||||||||||||||||||||| |||||| |||| |||| ||||||| |||||| || |||| |    
T  618 tattagaacaattgcttatgatttcggaacatttttaatgttttctatatttgagtca-gtaattctattcttcccgaaacattgcaattttaggatgtt 520  T
Q  342 tttgatgtaattcacgaagaaatcatgca 370  Q
    |||  ||||| | ||||||||||||||||    
T  519 ttttttgtaaattacgaagaaatcatgca 491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 386
Target Start/End: Original strand, 182583 - 182732
Alignment:
Q  237 gaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctat 336  Q
    ||||||||||||||  ||||| |||||||||||||  |||||||||||||||||||||||||| ||||||| || | || | |||||| | ||||| ||     
T  182583 gaggagtattagaacgattgcctatgatttcgggaattttgtaatgttttctatatttgagtc-tgtaattctagtttttccgaaacacaacaattttag 182681  T
Q  337 gatgtt-ttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |  ||| |||| | ||||||||||||||||||||||||||| ||| |||||    
T  182682 ggagttcttgaagaaattcacgaagaaatcatgcaaatcggaaaatcaaga 182732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 273
Target Start/End: Complemental strand, 24890 - 24791
Alignment:
Q  174 gtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggaca 273  Q
    ||||||||  ||||||||||| |||||  ||| ||||||| | ||||||||||||| | ||||||||||||||||| | ||| ||||| |||||| ||||    
T  24890 gtcatcttatgttattcttagcatgtttttcagtcattttgaataggttttacatccagaatagaggagtattagagaaattacttatcatttcgagaca 24791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 35256 - 35193
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtatta 247  Q
    ||||||||||| |||||  ||| ||||||||| ||||||||| ||| | |||||||||||||||    
T  35256 gttattcttagcatgtttttcagtcattttcaataggttttatatccataatagaggagtatta 35193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 211 - 373
Target Start/End: Complemental strand, 21491 - 21329
Alignment:
Q  211 tttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattat 309  Q
    ||||||||||||||| || ||||||  || ||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||| ||  |||| |    
T  21491 tttcagtaggttttagcagcaaaaag-gatgagtagtagaacaattgcttatgatttcgggacttttgtaatgttttctatatttgagt-atacaattct 21394  T
Q  310 attgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaat 373  Q
    | | ||||  || |||||||||| || || | |||||| ||||||||| ||||||||||||||||    
T  21393 agttttcccaaagcatagcaattttaggaggtttttgaagtaattcacaaagaaatcatgcaaat 21329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 184 - 372
Target Start/End: Original strand, 92847 - 93035
Alignment:
Q  184 gttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatg 282  Q
    ||||||||||| |||||  ||| | ||||| |||||| |||| || |||||| |||||| |||||||  |||||| |||  |||| |||  |||||||||    
T  92847 gttattcttagcatgtttttcagttatttttagtagggtttagcagcaaaaa-agaggaatattagagccattgcctatcgtttcaggaattttgtaatg 92945  T
Q  283 ttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaattcacgaagaaatcatgcaaa 372  Q
    ||||||||||||||||| | ||||| || | |||| |||||||||||||| || |  | |||||| |||||||||||||||||||||||||    
T  92946 ttttctatatttgagtc-tataattctagttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaagaaatcatgcaaa 93035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 271 - 386
Target Start/End: Original strand, 201938 - 202053
Alignment:
Q  271 acatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgc 369  Q
    ||||||||||||||||||||||||||||| |||||| | | | |||  |||||||| ||||| |  |||||| ||||||||||||| | |||||||||||    
T  201938 acatttgtaatgttttctatatttgagtc-tgtaatcagagttttctcgaaacataacaatttttcgatgttcttgatgtaattcatggagaaatcatgc 202036  T
Q  370 aaatcggcaaagcaaga 386  Q
    |||||| ||||||||||    
T  202037 aaatcgacaaagcaaga 202053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 394
Target Start/End: Complemental strand, 7441 - 7254
Alignment:
Q  207 tcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaat 306  Q
    ||||||| ||||||||||| ||| | |||| |||||| || ||   ||||| |||||| | | | ||||||||||||||| | |||||  |||  |||||    
T  7441 tcatttttagtaggttttatatccataataaaggagtttttgagcaattgcctatgatattgagtcatttgtaatgttttatgtatttatgtccagtaat 7342  T
Q  307 tatattgttcctgaaacatagcaattctatgatgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagacacttgaa 394  Q
    | || | |||| ||||||||||||||||| | |||||  || ||||||||||||||||||||||||| | | || ||||||| |||||    
T  7341 tctaattttcccgaaacatagcaattctagggtgtttacatctaattcacgaagaaatcatgcaaattgcctaaacaagacatttgaa 7254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 387
Target Start/End: Original strand, 41624 - 41759
Alignment:
Q  254 ttgcttatgatttcgggacatttgtaatgttttctatatttgagtcat-gtaattatattgttcctgaaacatagcaattctatgatgttttgatgtaat 352  Q
    |||| |||||||| |||||||||||||| |||||||||||||| |  | ||||||  ||| |||   ||||||||||||| || | | |||||| ||||     
T  41624 ttgcatatgattttgggacatttgtaatattttctatatttgaatatttgtaattcgattcttctcaaaacatagcaattttagggttttttgaggtaaa 41723  T
Q  353 tcacgaagaaatcatgcaaatc-ggcaaagcaagac 387  Q
    |||||||||||||||||||||| |||||||||||||    
T  41724 tcacgaagaaatcatgcaaatcaggcaaagcaagac 41759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 298
Target Start/End: Complemental strand, 192220 - 192086
Alignment:
Q  164 ttgatgataggtcatcttgagttattcttagtatgttcatcaatcattttcagtaggtttta-catcaaaaatagaggagtattagaaacattgcttatg 262  Q
    ||||||| ||||||||||  |||||| |||| ||| |  ||| ||||||||| ||||||||| || |||||  | |||||| |||||   ||||||||||    
T  192220 ttgatgacaggtcatcttacgttatttttagcatggttttcagtcattttcaataggttttagcagcaaaatga-aggagtgttagagcgattgcttatg 192122  T
Q  263 atttcgggacatttgtaatgttttctatatttgagt 298  Q
    |||||||||| |||||||||||||||||||||||||    
T  192121 atttcgggacttttgtaatgttttctatatttgagt 192086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 361
Target Start/End: Original strand, 4881 - 5066
Alignment:
Q  174 gtcatcttgagttattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggaca 273  Q
    ||||||||  ||||||||||| |||||  ||| ||| ||| ||||||||||||    ||| |||||||||||||||   |||||  ||||||| || |||    
T  4881 gtcatcttacgttattcttagcatgtttttcagtcaattttagtaggttttaccagcaaagtagaggagtattagatcaattgc--atgattttggaaca 4978  T
Q  274 tttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaaga 361  Q
    |||||| ||||||||||||| ||||| | ||||| |||| ||||  |||||||| |||| || | |||| |||||||||||||||||||    
T  4979 tttgtattgttttctatattcgagtc-tataattctattattcccaaaacatagaaattttagggtgttcttgatgtaattcacgaaga 5066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 388
Target Start/End: Original strand, 13495 - 13698
Alignment:
Q  186 tattcttagtatgttcatcaatcattttcagtaggttttacatcaaaaatagaggagtattagaaacattgcttatgatttcgggacatttgtaatgttt 285  Q
    ||||||||| |||||  ||||||| ||| ||||||||||||    ||| ||||||| |||||||   ||| |||||||||||||| |||||||| || ||    
T  13495 tattcttagcatgtttttcaatcaattttagtaggttttaccaacaaagtagaggaatattagatcaatttcttatgatttcgggtcatttgtattgatt 13594  T
Q  286 tctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacgaagaaatcatgcaaatc-ggcaaagca 383  Q
    ||||||||| |||| | ||||| || | ||||  ||||| | ||||| || | | || ||||||||||| |||||||||||| ||||||| | |||||||    
T  13595 tctatattttagtc-tataattctactattcccaaaacacatcaattttagggtattcttgatgtaatttacgaagaaatcaagcaaatcagacaaagca 13693  T
Q  384 agaca 388  Q
    |||||    
T  13694 agaca 13698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 388
Target Start/End: Original strand, 9204 - 9333
Alignment:
Q  259 tatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatgtt-ttgatgtaattcacg 357  Q
    |||||||| ||||||||| || || |||||||||||||||| | | ||| |||| ||||||||| ||||||||| ||   |||| ||||||||||| ||     
T  9204 tatgattttgggacatttttattgctttctatatttgagtc-tat-attctattcttcctgaaatatagcaattttaaagtgttcttgatgtaatttaca 9301  T
Q  358 aagaaatcatgcaaatc-ggcaaagcaagaca 388  Q
    ||||||| | ||||||| ||||||||||||||    
T  9302 aagaaataaagcaaatcaggcaaagcaagaca 9333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 8053 - 8132
Alignment:
Q  80 aaagtggattttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccctaagtaaccatatg 160  Q
    ||||| |||||||||| ||||||| | |||||| ||||  |||||||||||||||||||||||||||| ||||||||||||    
T  8053 aaagttgattttgcttgttttccatgttggatcggtgcgaaaagcctagttttcttctcttaaaccct-agtaaccatatg 8132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 253 - 386
Target Start/End: Complemental strand, 3426 - 3293
Alignment:
Q  253 attgcttatgatttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaacatagcaattctatgatg-ttttgatgtaa 351  Q
    ||||| ||| |||||||||| ||| ||||||||||||||||||||||| |||||| || | || |  |||||||||||||  | |  | |||||| ||||    
T  3426 attgcctatcatttcgggacttttataatgttttctatatttgagtca-gtaattttagtttttccaaaacatagcaatttgaaggggattttgaagtaa 3328  T
Q  352 ttcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    || |||||||||||||||||||||| ||| |||||    
T  3327 ttaacgaagaaatcatgcaaatcggaaaatcaaga 3293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0441 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 341 - 386
Target Start/End: Original strand, 2141 - 2186
Alignment:
Q  341 ttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaaga 386  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||    
T  2141 ttttgatgtaattcacgaagaaatcatgtaaatcggcaatgcaaga 2186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 37281 - 37225
Alignment:
Q  90 ttgcttattttccaagctggatcagtgcataaagcctagttttcttctcttaaaccc 146  Q
    |||||| |||| ||||||||||| | | |||||| ||||||||||||||||||||||    
T  37281 ttgcttgttttgcaagctggatcggcggataaagactagttttcttctcttaaaccc 37225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 324
Target Start/End: Original strand, 36229 - 36289
Alignment:
Q  263 atttcgggacatttgtaatgttttctatatttgagtcatgtaattatattgttcctgaaaca 324  Q
    |||||||||||||  || |||||||||||||||||| |||||||| |||| |||| ||||||    
T  36229 atttcgggacattaatattgttttctatatttgagt-atgtaattctattcttcccgaaaca 36289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 1890 times since January 2019
Visitors: 1433