View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0134_2D_high_17 (Length: 286)
Name: NF0134_2D_high_17
Description: NF0134_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0134_2D_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 28591462 - 28591206
Alignment:
| Q |
13 |
aattaataactcctcttataagctcaaactctcatacaaatttagttatttgacttttacactctatttgtttctttgcgcggaaaaaccgttaaatttg |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28591462 |
aattaataactcctcttataagctcaaactctcatacaaatttagttatttgacttttacactctatttgtttctttgcgcggaaaaaccgttaaatttg |
28591363 |
T |
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| Q |
113 |
aaaatggcttcttctaattctactaacttgcttacgtttcctttgtctccaactgaactgcttaactcacattttcctcaattccacaccgactctcatt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28591362 |
aaaatggcttcttctaattctactaacttgcttacgtttcctttgtctccaactgaactgcttaactcacattttcctcaattccacaccgactctcatt |
28591263 |
T |
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| Q |
213 |
acgataacttctatgtcaatgccaatggtaacttaactcttacgccatttttcaact |
269 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
28591262 |
acgataacttctatgtcaatgccaatggtaacttaactctaacgccatttttcaact |
28591206 |
T |
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