View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0134_2D_high_3 (Length: 589)

Name: NF0134_2D_high_3
Description: NF0134_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0134_2D_high_3
NF0134_2D_high_3
[»] chr2 (20 HSPs)
chr2 (17-568)||(41845917-41846468)
chr2 (494-568)||(16366965-16367039)
chr2 (494-568)||(20911132-20911206)
chr2 (486-565)||(9694053-9694132)
chr2 (494-568)||(1149939-1150013)
chr2 (494-552)||(1150068-1150126)
chr2 (494-552)||(16367158-16367216)
chr2 (494-568)||(20911437-20911511)
chr2 (494-567)||(17285044-17285117)
chr2 (480-537)||(17580664-17580720)
chr2 (495-568)||(19606920-19606993)
chr2 (494-537)||(22309433-22309476)
chr2 (489-552)||(45663698-45663761)
chr2 (494-552)||(8089583-8089641)
chr2 (494-568)||(10446834-10446908)
chr2 (494-552)||(22309755-22309813)
chr2 (494-552)||(32519286-32519344)
chr2 (494-552)||(41846587-41846645)
chr2 (489-546)||(43682183-43682241)
chr2 (494-567)||(32519157-32519230)
[»] chr4 (21 HSPs)
chr4 (486-568)||(50245851-50245933)
chr4 (494-568)||(20086439-20086513)
chr4 (494-568)||(50246166-50246240)
chr4 (495-568)||(48507725-48507798)
chr4 (492-552)||(48507545-48507605)
chr4 (494-568)||(8287241-8287315)
chr4 (494-552)||(35730856-35730914)
chr4 (494-552)||(37678043-37678101)
chr4 (485-568)||(53559695-53559778)
chr4 (494-552)||(8287063-8287121)
chr4 (494-552)||(22249928-22249986)
chr4 (495-565)||(35730972-35731042)
chr4 (494-552)||(37677850-37677908)
chr4 (494-552)||(47862283-47862341)
chr4 (495-568)||(12691713-12691786)
chr4 (494-567)||(13872071-13872144)
chr4 (495-552)||(13872265-13872322)
chr4 (494-567)||(54961433-54961506)
chr4 (492-537)||(54961770-54961815)
chr4 (499-567)||(20600954-20601022)
chr4 (494-550)||(27813181-27813237)
[»] chr7 (18 HSPs)
chr7 (393-458)||(19506966-19507031)
chr7 (494-567)||(25049470-25049543)
chr7 (492-552)||(20947324-20947384)
chr7 (494-568)||(26825632-26825706)
chr7 (494-552)||(27557979-27558037)
chr7 (494-568)||(43937896-43937970)
chr7 (495-568)||(20947196-20947269)
chr7 (495-552)||(27557851-27557908)
chr7 (481-567)||(37563663-37563749)
chr7 (494-552)||(43938089-43938147)
chr7 (494-537)||(27558191-27558234)
chr7 (494-552)||(12929449-12929507)
chr7 (494-552)||(19980081-19980139)
chr7 (494-568)||(34454486-34454560)
chr7 (494-552)||(34454675-34454733)
chr7 (479-537)||(44545582-44545640)
chr7 (494-552)||(47081849-47081907)
chr7 (504-568)||(12931046-12931110)
[»] chr6 (26 HSPs)
chr6 (480-568)||(13480516-13480604)
chr6 (494-568)||(16704617-16704691)
chr6 (494-568)||(23291746-23291820)
chr6 (481-568)||(738005-738092)
chr6 (494-537)||(3586406-3586449)
chr6 (494-537)||(21544520-21544563)
chr6 (506-568)||(3299867-3299929)
chr6 (494-568)||(15819798-15819872)
chr6 (494-568)||(16706959-16707033)
chr6 (498-552)||(31879782-31879836)
chr6 (495-552)||(19296423-19296480)
chr6 (488-552)||(5064331-5064395)
chr6 (489-568)||(30234900-30234979)
chr6 (494-568)||(13480210-13480284)
chr6 (494-552)||(20561122-20561180)
chr6 (494-568)||(20994999-20995073)
chr6 (494-552)||(21880559-21880617)
chr6 (518-568)||(22494188-22494238)
chr6 (494-552)||(23291875-23291933)
chr6 (494-568)||(23292052-23292126)
chr6 (494-568)||(26503662-26503736)
chr6 (494-567)||(3299561-3299634)
chr6 (495-552)||(20774092-20774149)
chr6 (504-552)||(737902-737950)
chr6 (489-565)||(31386796-31386872)
chr6 (495-567)||(32337567-32337639)
[»] chr5 (29 HSPs)
chr5 (489-568)||(14745445-14745524)
chr5 (486-568)||(7015502-7015584)
chr5 (479-552)||(31118942-31119015)
chr5 (483-568)||(33735621-33735706)
chr5 (494-537)||(9915433-9915476)
chr5 (481-568)||(25253394-25253481)
chr5 (481-568)||(25317185-25317272)
chr5 (485-568)||(32052217-32052300)
chr5 (488-567)||(37944990-37945069)
chr5 (495-565)||(8323059-8323129)
chr5 (494-565)||(21260867-21260938)
chr5 (491-549)||(12628260-12628318)
chr5 (494-544)||(18934852-18934902)
chr5 (494-552)||(22024065-22024123)
chr5 (494-552)||(25253217-25253275)
chr5 (494-568)||(32052532-32052606)
chr5 (495-552)||(16117964-16118021)
chr5 (491-568)||(20705020-20705099)
chr5 (494-537)||(16118146-16118189)
chr5 (494-552)||(12990919-12990977)
chr5 (494-552)||(13064540-13064598)
chr5 (494-568)||(22533392-22533466)
chr5 (494-552)||(22533585-22533643)
chr5 (494-552)||(33735508-33735566)
chr5 (518-568)||(41339380-41339430)
chr5 (495-568)||(6421625-6421698)
chr5 (496-552)||(6421819-6421875)
chr5 (504-568)||(14745621-14745685)
chr5 (492-552)||(41339547-41339607)
[»] scaffold0233 (2 HSPs)
scaffold0233 (491-568)||(8432-8509)
scaffold0233 (494-567)||(8741-8814)
[»] chr1 (36 HSPs)
chr1 (495-568)||(35311977-35312050)
chr1 (489-568)||(19755713-19755792)
chr1 (494-568)||(33347724-33347798)
chr1 (494-568)||(49003183-49003257)
chr1 (479-568)||(25414831-25414920)
chr1 (504-568)||(37152550-37152614)
chr1 (491-562)||(34176238-34176309)
chr1 (494-552)||(2953659-2953717)
chr1 (494-568)||(2953772-2953846)
chr1 (494-552)||(5183701-5183759)
chr1 (494-552)||(19755600-19755658)
chr1 (494-552)||(24701465-24701523)
chr1 (495-553)||(34176119-34176177)
chr1 (494-552)||(46849982-46850040)
chr1 (494-568)||(48380683-48380757)
chr1 (495-568)||(29980642-29980715)
chr1 (489-562)||(46364571-46364644)
chr1 (495-568)||(49002879-49002952)
chr1 (479-567)||(5926506-5926594)
chr1 (494-537)||(2953466-2953509)
chr1 (489-552)||(33030331-33030394)
chr1 (494-552)||(1047335-1047393)
chr1 (494-568)||(1047512-1047586)
chr1 (494-552)||(5926845-5926903)
chr1 (494-536)||(8890549-8890591)
chr1 (494-532)||(10019730-10019768)
chr1 (494-552)||(12577336-12577394)
chr1 (494-552)||(29042886-29042944)
chr1 (494-552)||(33347611-33347669)
chr1 (494-552)||(46364770-46364828)
chr1 (494-567)||(739221-739294)
chr1 (487-536)||(8890207-8890256)
chr1 (494-559)||(10019568-10019633)
chr1 (484-568)||(5183498-5183582)
chr1 (481-537)||(6056365-6056421)
chr1 (508-552)||(46849674-46849718)
[»] chr8 (31 HSPs)
chr8 (484-567)||(9632612-9632695)
chr8 (495-552)||(37713699-37713756)
chr8 (494-537)||(35163697-35163740)
chr8 (494-568)||(547743-547817)
chr8 (494-552)||(11478147-11478205)
chr8 (494-552)||(20096151-20096209)
chr8 (494-552)||(37342977-37343035)
chr8 (482-552)||(40422484-40422554)
chr8 (494-552)||(40525638-40525696)
chr8 (494-552)||(41182027-41182085)
chr8 (494-567)||(7702-7775)
chr8 (494-537)||(23424514-23424557)
chr8 (497-552)||(36623551-36623606)
chr8 (494-552)||(547630-547688)
chr8 (494-568)||(22763597-22763671)
chr8 (494-568)||(25287794-25287868)
chr8 (494-552)||(25287923-25287981)
chr8 (494-552)||(26740042-26740100)
chr8 (486-568)||(27857050-27857132)
chr8 (494-552)||(31690026-31690084)
chr8 (494-568)||(40525815-40525889)
chr8 (495-537)||(40933321-40933363)
chr8 (494-552)||(41251254-41251312)
chr8 (494-552)||(43866842-43866900)
chr8 (495-552)||(7396-7453)
chr8 (494-551)||(7588-7645)
chr8 (494-567)||(41251125-41251198)
chr8 (495-567)||(20096023-20096095)
chr8 (504-568)||(20096332-20096396)
chr8 (492-568)||(31690204-31690279)
chr8 (492-568)||(41801816-41801892)
[»] scaffold0279 (3 HSPs)
scaffold0279 (494-552)||(11052-11110)
scaffold0279 (495-552)||(11181-11238)
scaffold0279 (494-537)||(10855-10898)
[»] chr3 (20 HSPs)
chr3 (494-552)||(10749320-10749378)
chr3 (494-552)||(33458242-33458300)
chr3 (479-552)||(11312722-11312795)
chr3 (495-568)||(30890515-30890588)
chr3 (495-568)||(55036672-55036745)
chr3 (490-537)||(53037366-53037413)
chr3 (494-568)||(1741389-1741463)
chr3 (494-552)||(21300328-21300386)
chr3 (495-537)||(33458062-33458104)
chr3 (506-563)||(30890221-30890278)
chr3 (495-552)||(46670452-46670508)
chr3 (494-567)||(53037029-53037102)
chr3 (495-568)||(55036977-55037050)
chr3 (504-568)||(10749704-10749768)
chr3 (490-537)||(30803844-30803891)
chr3 (494-549)||(51279541-51279596)
chr3 (494-552)||(22129137-22129195)
chr3 (494-552)||(55036800-55036858)
chr3 (492-552)||(30890338-30890398)
chr3 (495-559)||(40256998-40257062)
[»] scaffold0202 (2 HSPs)
scaffold0202 (489-552)||(14558-14621)
scaffold0202 (495-567)||(14238-14310)
[»] scaffold0321 (2 HSPs)
scaffold0321 (494-568)||(10970-11044)
scaffold0321 (496-552)||(10793-10849)
[»] scaffold0206 (1 HSPs)
scaffold0206 (494-567)||(10327-10400)
[»] scaffold0022 (1 HSPs)
scaffold0022 (492-552)||(120330-120390)
[»] scaffold1493 (2 HSPs)
scaffold1493 (494-552)||(788-846)
scaffold1493 (494-568)||(901-975)
[»] scaffold0201 (1 HSPs)
scaffold0201 (495-552)||(14089-14146)


Alignment Details
Target: chr2 (Bit Score: 479; Significance: 0; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 479; E-Value: 0
Query Start/End: Original strand, 17 - 568
Target Start/End: Original strand, 41845917 - 41846468
Alignment:
Q  17 agttctcatttgatgcattcagtcaccataaagctgtggctaggagaagttactacactgatttttggttcaggtttcctccatggaatcttaacaagtt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41845917 agttctcatttgatgcattcagtcaccataaagctgtggctaggagaagttactacactgatttttggttcaggtttcctccatggaatcttaacaagtt 41846016  T
Q  117 ccaactacttgaagaagcttaccatttaaactacattggaatacttcttgttttactcggcttgaagagttcaaaacgttcattgtatgaggcttgtaaa 216  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41846017 ccaactacttgaagaagcttaccatttaaactacactggaatacttcttgttttaatcggcttgaagagttcaaaacgttcattgtatgaggcttgtaaa 41846116  T
Q  217 tgattttcaactcacttgcttatttttacaaccatcatccaataaggatagctgattattgttattctttatttctaggcttatgatatttatgctatcc 316  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41846117 tgattttcaactcacttgcttatttttacaactatcatccaataaggatagctgattattgttattctttatttctaggcttatgatatttatgctatcc 41846216  T
Q  317 aagattctaatgtgtgttattataataaataaagagattcaagtgtgtgnnnnnnncttttacaatgtatgtcttttagacaattaaaaatataatgatt 416  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  41846217 aagattctaatgtgtgttattataataaataatgagattcaaatgtgtgtgtttttcttttacaatgtatgtcttttagacaattaaaaatataatgatt 41846316  T
Q  417 acataatttcttataaaaatttacctcttttgtcttcttaaacgcacttgttagcattctagaaaataaaaaatagacttaaatagatctttcgtcccta 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41846317 acataatttcttataaaaatttacctcttttgtcttcttaaacgcacttgttagcattctagaaaataaaaaataggcttaaatagatctttcgtcccta 41846416  T
Q  517 taaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
     |||||||||||||||||||| || ||| ||||||| |||||| ||| ||||    
T  41846417 caaatataggtcatttgaattttcgtccctgaagttagtaatccttctaatc 41846468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 568
Target Start/End: Original strand, 16366965 - 16367039
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||  |||||||||||| ||||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  16366965 cttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatc 16367039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 568
Target Start/End: Original strand, 20911132 - 20911206
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||| ||||||||||||  |||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  20911132 cttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatc 20911206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 486 - 565
Target Start/End: Complemental strand, 9694132 - 9694053
Alignment:
Q  486 aaaatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttcca 565  Q
    ||||||| ||||||||| |||||||||| |  |||||||||||||||||||| || ||| |||||||  ||||| |||||    
T  9694132 aaaataggcttaaataggtctttcgtccatgcaaatataggtcatttgaattttcgtccctgaagttactaatccttcca 9694053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 568
Target Start/End: Original strand, 1149939 - 1150013
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||| | ||||||||||  |||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  1149939 cttaaataggtatttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatc 1150013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 1150126 - 1150068
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||| |||||||||||||||||||| || ||| |||||||    
T  1150126 cttaaataggtctttcatccctacaaatataggtcatttgaattttcgtccctgaagtt 1150068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 16367158 - 16367216
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||| |||||||||||||||||||| || ||| |||||||    
T  16367158 cttaaataggtctttcatccctacaaatataggtcatttgaattttcgtccctgaagtt 16367216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 568
Target Start/End: Complemental strand, 20911511 - 20911437
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||  |||||||||||| ||||||||||||||||||||| |  ||| |||||||  ||||| ||||||||    
T  20911511 cttaaatatgtctttcgtccctgtaaatataggtcatttgaatttttgtccctgaagttactaatcattccaatc 20911437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 494 - 567
Target Start/End: Complemental strand, 17285117 - 17285044
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    ||||||||||||||||||||||  |||| ||||||||||||||| || ||  |||||||  ||||| |||||||    
T  17285117 cttaaatagatctttcgtccctgaaaatttaggtcatttgaattttcgtcaatgaagttactaatccttccaat 17285044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 480 - 537
Target Start/End: Complemental strand, 17580720 - 17580664
Alignment:
Q  480 aaataaaaaatagacttaaatagatctttcgtccctataaatataggtcatttgaatt 537  Q
    |||||||||| || ||||||||  ||||||||||||| ||||||||||||||||||||    
T  17580720 aaataaaaaa-aggcttaaatatgtctttcgtccctacaaatataggtcatttgaatt 17580664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 495 - 568
Target Start/End: Original strand, 19606920 - 19606993
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||  |||||||||||| |||||||| |||||||||||| || ||| |||||||  ||||| ||||||||    
T  19606920 ttaaatatgtctttcgtccctgtaaatatatgtcatttgaattttcgtccctgaagttactaatccttccaatc 19606993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 22309433 - 22309476
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaatt 537  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||    
T  22309433 cttaaataggtctttcgtccctgcaaatataggtcatttgaatt 22309476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 552
Target Start/End: Original strand, 45663698 - 45663761
Alignment:
Q  489 atagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    |||| ||||||||  ||||||||||||  |||||||||||||||||||| || | |||||||||    
T  45663698 ataggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgttcttgaagtt 45663761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 8089641 - 8089583
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  ||||||||||| |||||||| || |||||||||||    
T  8089641 cttaaataggtctttcatccctgcaaatataggtcgtttgaattttcgtccttgaagtt 8089583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 568
Target Start/End: Original strand, 10446834 - 10446908
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||  ||||||||||||  ||||||||| |||||||||| || ||| |||||||  ||||| ||||||||    
T  10446834 cttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatc 10446908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 22309813 - 22309755
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  22309813 cttaaataggtctttcttccctgcaaatataggtcatttgaattttcgtccctgaagtt 22309755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 32519344 - 32519286
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  32519344 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagtt 32519286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 41846587 - 41846645
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||  ||||||||||||  |||||||||||||||||||| || ||| |||||||    
T  41846587 cttaaataagtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagtt 41846645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 546
Target Start/End: Complemental strand, 43682241 - 43682183
Alignment:
Q  489 atagacttaaatagatc-tttcgtccctataaatataggtcatttgaattgtcatcctt 546  Q
    |||| ||||||||| || ||||||||||  |||||||||||||||||||| ||||||||    
T  43682241 ataggcttaaataggtcatttcgtccctccaaatataggtcatttgaattttcatcctt 43682183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 567
Target Start/End: Original strand, 32519157 - 32519230
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    ||||||||  ||||||||||||  |||||||||||||||||||| || ||| |||| ||  ||||| |||||||    
T  32519157 cttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaaattactaatccttccaat 32519230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 6e-20; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 50245851 - 50245933
Alignment:
Q  486 aaaatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||  ||||| ||||||||    
T  50245851 aaaataggtttaaatagatctttcgtccctgtaaatataggtcatttgaattttcatccatgaagttactaatcattccaatc 50245933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 568
Target Start/End: Original strand, 20086439 - 20086513
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||  ||||||||| |||||||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  20086439 cttaaatatgtctttcgtctctataaatataggtcatttgaattttcgtccctgaagttactaatccttccaatc 20086513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 568
Target Start/End: Complemental strand, 50246240 - 50246166
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||||||||||| |||||  |||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  50246240 cttaaatagatctttcatccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatc 50246166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 495 - 568
Target Start/End: Complemental strand, 48507798 - 48507725
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||| ||||||||||||| |||||||||||||||||||| || ||  |||||||  ||||| ||||||||    
T  48507798 ttaaataggtctttcgtccctacaaatataggtcatttgaattttcgtctctgaagttactaatccttccaatc 48507725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 492 - 552
Target Start/End: Complemental strand, 48507605 - 48507545
Alignment:
Q  492 gacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||| || ||| |||||||    
T  48507605 gacttaaatagatctttcgtccctgcaaatataagtcatttgaattttcgtccctgaagtt 48507545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 568
Target Start/End: Complemental strand, 8287315 - 8287241
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||| ||||||||||||  ||||||||| |||||||||| || ||| |||||||  ||||| ||||||||    
T  8287315 cttaaataggtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatc 8287241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 35730856 - 35730914
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||||||| |  |||||||||||||||||||| || |||||||||||    
T  35730856 cttaaatagttctttcgtccatgcaaatataggtcatttgaattttcgtccttgaagtt 35730914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 37678043 - 37678101
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| ||||||||||||  |||||||||||||||||||| || ||| |||||||    
T  37678043 cttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagtt 37678101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 568
Target Start/End: Complemental strand, 53559778 - 53559695
Alignment:
Q  485 aaaaatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||| || ||||||||  ||||||||||||  ||||||||| |||||||||| || ||| |||||||  ||||| ||||||||    
T  53559778 aaaaaaaggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcgttccaatc 53559695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 8287121 - 8287063
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||||| |||  |||||||||||||||||||| || ||| |||||||    
T  8287121 cttaaataggtctttcgttcctgcaaatataggtcatttgaattttcgtccctgaagtt 8287063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 22249928 - 22249986
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||  |||||| |||||  |||||||||||||||||||| |||||| |||||||    
T  22249928 cttaaataagtctttcatccctgcaaatataggtcatttgaattttcatccctgaagtt 22249986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 495 - 565
Target Start/End: Complemental strand, 35731042 - 35730972
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttcca 565  Q
    |||| ||| ||||||||||||  |||||||||||||||||||| || ||| |||||||  ||||| |||||    
T  35731042 ttaagtaggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttcca 35730972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 37677850 - 37677908
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  37677850 cttaaataggtctttcttccctgcaaatataggtcatttgaattttcgtccctgaagtt 37677908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 47862341 - 47862283
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  47862341 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagtt 47862283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 568
Target Start/End: Complemental strand, 12691786 - 12691713
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||  ||||||||||||  |||||||||||||||||||| |  ||| |||||||  ||||| ||||||||    
T  12691786 ttaaatatgtctttcgtccctgcaaatataggtcatttgaatttttgtccctgaagttactaatccttccaatc 12691713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 567
Target Start/End: Original strand, 13872071 - 13872144
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    ||||||||  ||||||||||||  |||||||||| ||||||||| || ||| |||||||  ||||| |||||||    
T  13872071 cttaaatatgtctttcgtccctgcaaatataggttatttgaattttcgtccatgaagttattaatccttccaat 13872144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 552
Target Start/End: Original strand, 13872265 - 13872322
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    |||||||| |||||| |||||  ||||||| |||||||||||| | ||||||||||||    
T  13872265 ttaaataggtctttcatccctgcaaatatatgtcatttgaatttttatccttgaagtt 13872322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 567
Target Start/End: Original strand, 54961433 - 54961506
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    ||||||||| ||||||||||||  ||||||||  |||||||||| || ||| |||||||  ||||| |||||||    
T  54961433 cttaaataggtctttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaatccttccaat 54961506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 537
Target Start/End: Complemental strand, 54961815 - 54961770
Alignment:
Q  492 gacttaaatagatctttcgtccctataaatataggtcatttgaatt 537  Q
    ||||||||||  ||||||||||||  ||||||||||||||||||||    
T  54961815 gacttaaatatgtctttcgtccctgcaaatataggtcatttgaatt 54961770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 499 - 567
Target Start/End: Original strand, 20600954 - 20601022
Alignment:
Q  499 atagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    |||| ||||||||||||  |||||||||||||||||||| || |  ||||||||| ||||  |||||||    
T  20600954 ataggtctttcgtcccttcaaatataggtcatttgaattttcgtttttgaagttgctaattcttccaat 20601022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 550
Target Start/End: Complemental strand, 27813237 - 27813181
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaag 550  Q
    ||||||||| ||||||||||||  |||||||| ||||||||||| || ||| |||||    
T  27813237 cttaaataggtctttcgtccctgcaaatatagatcatttgaattttcgtccctgaag 27813181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 6e-17; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 393 - 458
Target Start/End: Original strand, 19506966 - 19507031
Alignment:
Q  393 tagacaattaaaaatataatgattacataatttcttataaaaatttacctcttttgtcttcttaaa 458  Q
    ||||| ||||||||||||||||||||| | ||||  ||||||||||||||||||||||||||||||    
T  19506966 tagacgattaaaaatataatgattacacattttcccataaaaatttacctcttttgtcttcttaaa 19507031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 494 - 567
Target Start/End: Complemental strand, 25049543 - 25049470
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    ||||||||| |||||||||||| ||||||||||||||||||||| |  ||| |||||||  |||||||||||||    
T  25049543 cttaaataggtctttcgtccctgtaaatataggtcatttgaatttttctccctgaagttactaatctttccaat 25049470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 492 - 552
Target Start/End: Complemental strand, 20947384 - 20947324
Alignment:
Q  492 gacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||| || |||||||||||    
T  20947384 gacttaaatagatatttcgtcccttcaaatataggtcatttgaattttcgtccttgaagtt 20947324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 568
Target Start/End: Original strand, 26825632 - 26825706
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||  |||||||||||| ||||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  26825632 cttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatcattccaatc 26825706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 27558037 - 27557979
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| ||||||||||||  |||||||||||||||||||| || |||||||||||    
T  27558037 cttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccttgaagtt 27557979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 568
Target Start/End: Original strand, 43937896 - 43937970
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||  |||||||||| | ||||||||||||||||||||| |||||| |||||||  ||||| ||||||||    
T  43937896 cttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcatccctgaagttactaatccttccaatc 43937970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 495 - 568
Target Start/End: Original strand, 20947196 - 20947269
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||| ||||||||||||  |||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  20947196 ttaaataggtctttcgtcccttcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatc 20947269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 495 - 552
Target Start/End: Original strand, 27557851 - 27557908
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||| || |||||||||||| ||||||||||||||||||||| || |||||||||||    
T  27557851 ttaaacaggtctttcgtccctgtaaatataggtcatttgaattttcgtccttgaagtt 27557908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 567
Target Start/End: Complemental strand, 37563749 - 37563663
Alignment:
Q  481 aataaaaaatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    ||||||||  || ||||||||  |||||||||||| |||||||||| |||||||||| || ||| |||||||  ||||| |||||||    
T  37563749 aataaaaacaaggcttaaatatgtctttcgtccctgtaaatataggccatttgaattttcgtccctgaagttactaatccttccaat 37563663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 43938089 - 43938147
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||||| |||| |||||| |||||||||||||||||||| || ||| |||||||    
T  43938089 cttaaatagatatttcatccctacaaatataggtcatttgaattttcgtccctgaagtt 43938147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Complemental strand, 27558234 - 27558191
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaatt 537  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||    
T  27558234 cttaaataggtctttcgtccctgcaaatataggtcatttgaatt 27558191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 12929449 - 12929507
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  12929449 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccatgaagtt 12929507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 19980139 - 19980081
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||||||| |  |||||||| ||||||||||| || |||||||||||    
T  19980139 cttaaataggtctttcgtccttccaaatatagatcatttgaattttcgtccttgaagtt 19980081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 568
Target Start/End: Original strand, 34454486 - 34454560
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||  || |||||||||  |||||||||||||||||||| || || ||||||||  ||||| ||||||||    
T  34454486 cttaaatatgtccttcgtccctgcaaatataggtcatttgaattttcgtctttgaagttactaatccttccaatc 34454560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 34454675 - 34454733
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  34454675 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagtt 34454733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 537
Target Start/End: Original strand, 44545582 - 44545640
Alignment:
Q  479 aaaataaaaaatagacttaaatagatctttcgtccctataaatataggtcatttgaatt 537  Q
    |||| |||| |||||||||||||| ||||| ||| ||  ||||||||||||||||||||    
T  44545582 aaaaaaaaacatagacttaaataggtcttttgtctctgcaaatataggtcatttgaatt 44545640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 47081849 - 47081907
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| ||||||||||||  ||||||| |||||||||||| |||||  |||||||    
T  47081849 cttaaataggtctttcgtcccttcaaatatatgtcatttgaattttcatctctgaagtt 47081907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 568
Target Start/End: Complemental strand, 12931110 - 12931046
Alignment:
Q  504 tctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||||||  |||||| ||||||||||||| || ||| |||||||  ||||| ||||||||    
T  12931110 tctttcgtccctgcaaatattggtcatttgaattttcgtccctgaagttactaatccttccaatc 12931046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 480 - 568
Target Start/End: Complemental strand, 13480604 - 13480516
Alignment:
Q  480 aaataaaaaatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||||||| ||||||||  |||||||||| | ||||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  13480604 aaataaaaaataggcttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatc 13480516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 568
Target Start/End: Complemental strand, 16704691 - 16704617
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||| ||||||||||||  ||||||||| |||||||||| || |||||||||||  ||||| ||||||||    
T  16704691 cttaaataggtctttcgtccctgcaaatataggccatttgaattttcgtccttgaagttactaatccttccaatc 16704617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 568
Target Start/End: Original strand, 23291746 - 23291820
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||  ||||||||||||| ||||||||| |||||||||| |||||| |||||||  ||||| ||||||||    
T  23291746 cttaaatatgtctttcgtccctacaaatataggccatttgaattttcatccctgaagttactaatccttccaatc 23291820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 481 - 568
Target Start/End: Complemental strand, 738092 - 738005
Alignment:
Q  481 aataaaaaatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||| || | ||||||||  ||||||||||||  |||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  738092 aataaaacattggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatc 738005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 3586406 - 3586449
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaatt 537  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||    
T  3586406 cttaaataggtctttcgtccctacaaatataggtcatttgaatt 3586449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 21544520 - 21544563
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaatt 537  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  21544520 cttaaatagatctttcgtccctgcaaatataggtcatttgaatt 21544563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 568
Target Start/End: Complemental strand, 3299929 - 3299867
Alignment:
Q  506 tttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||||  |||||||||||||||||||| || |||||||||||  ||||| ||||||||    
T  3299929 tttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatc 3299867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 568
Target Start/End: Complemental strand, 15819872 - 15819798
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||  ||||||||||||  |||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  15819872 cttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatc 15819798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 568
Target Start/End: Complemental strand, 16707033 - 16706959
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||| ||| ||||| ||||||  |||||||||||||||||||| || |||||||||||  ||||| ||||||||    
T  16707033 cttaattaggtctttggtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatcattccaatc 16706959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 498 - 552
Target Start/End: Complemental strand, 31879836 - 31879782
Alignment:
Q  498 aatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||| ||||||||||||| ||||||||||||||||||||  ||||| |||||||    
T  31879836 aataggtctttcgtccctacaaatataggtcatttgaatttgcatccctgaagtt 31879782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 495 - 552
Target Start/End: Original strand, 19296423 - 19296480
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    |||||||| ||| ||||||||  |||||||||||||||||||| |||||| |||||||    
T  19296423 ttaaataggtctatcgtccctgcaaatataggtcatttgaattttcatccatgaagtt 19296480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 488 - 552
Target Start/End: Original strand, 5064331 - 5064395
Alignment:
Q  488 aatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||| ||||||||  |||||||||||| |||||||| |||||||||||| || ||| |||||||    
T  5064331 aataggcttaaatatgtctttcgtccctgtaaatataagtcatttgaattttcgtccctgaagtt 5064395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 568
Target Start/End: Complemental strand, 30234979 - 30234900
Alignment:
Q  489 atagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||| ||||||||  ||||||||||||  ||||||||||  |||||||| |||||| |||||||  ||||| ||||||||    
T  30234979 ataggcttaaatatgtctttcgtccctgcaaatataggttgtttgaattttcatccctgaagttactaatccttccaatc 30234900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 568
Target Start/End: Original strand, 13480210 - 13480284
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||  ||||||||||||  ||||||||| |||||||||| || ||| |||||||  ||||| ||||||||    
T  13480210 cttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatc 13480284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 20561122 - 20561180
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||  |||||| |||||  |||||||||||||||||||| || |||||||||||    
T  20561122 cttaaatatgtctttcatccctgcaaatataggtcatttgaattttcgtccttgaagtt 20561180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 568
Target Start/End: Complemental strand, 20995073 - 20994999
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||| ||||||||| ||  ||||| | |||||||||||| |||||| |||||||  ||||| ||||||||    
T  20995073 cttaaataggtctttcgtctctgcaaatagaagtcatttgaattttcatccctgaagttactaatccttccaatc 20994999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 21880559 - 21880617
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    |||||| || |||||| |||||| |||||||||||||||||||| || ||| |||||||    
T  21880559 cttaaacaggtctttcatccctacaaatataggtcatttgaattttcgtccctgaagtt 21880617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 518 - 568
Target Start/End: Complemental strand, 22494238 - 22494188
Alignment:
Q  518 aaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||||||||||||||| || |||||||||||  ||||| ||||||||    
T  22494238 aaatataggtcatttgaattttcgtccttgaagttactaatccttccaatc 22494188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 23291933 - 23291875
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  23291933 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagtt 23291875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 568
Target Start/End: Complemental strand, 23292126 - 23292052
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||  |||||||||| |  |||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  23292126 cttaaatatgtctttcgtccatgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatc 23292052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 568
Target Start/End: Complemental strand, 26503736 - 26503662
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||| | ||||||||||  ||||||| |||||||||||| || ||| |||||||  ||||| ||||||||    
T  26503736 cttaaataggtttttcgtccctgcaaatataagtcatttgaattttcgtccatgaagttattaatccttccaatc 26503662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 567
Target Start/End: Original strand, 3299561 - 3299634
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    ||||||||| ||||||||| ||  ||||||| |||||||||||| || ||| |||||||  ||||| |||||||    
T  3299561 cttaaataggtctttcgtctctgcaaatataagtcatttgaattttcgtccatgaagttactaatcattccaat 3299634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 552
Target Start/End: Original strand, 20774092 - 20774149
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    |||||||| |||||| ||| || ||||||| |||||||||||| || |||||||||||    
T  20774092 ttaaataggtctttcatccttacaaatatatgtcatttgaattttcgtccttgaagtt 20774149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 552
Target Start/End: Original strand, 737902 - 737950
Alignment:
Q  504 tctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||||||  |||||||||||||||||||| |||| | |||||||    
T  737902 tctttcgtccctgcaaatataggtcatttgaattttcattcctgaagtt 737950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 489 - 565
Target Start/End: Original strand, 31386796 - 31386872
Alignment:
Q  489 atagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttcca 565  Q
    |||| ||||||||| | |||| ||||| ||||||||||  ||||||||  || |||||||||||| ||||| |||||    
T  31386796 ataggcttaaataggtgtttcatccctgtaaatataggatatttgaatattcgtccttgaagttgctaatccttcca 31386872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 567
Target Start/End: Original strand, 32337567 - 32337639
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    |||||||| ||||||||||||  ||||||||  |||||||||| || ||| |||||||  ||||| |||||||    
T  32337567 ttaaataggtctttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaatccttccaat 32337639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 9e-16; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 568
Target Start/End: Original strand, 14745445 - 14745524
Alignment:
Q  489 atagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||| ||||||||| ||||||||||||  |||||||||||||||||||| |||||| |||||||  ||||| ||||||||    
T  14745445 ataggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcatccctgaagttactaatccttccaatc 14745524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 7015502 - 7015584
Alignment:
Q  486 aaaatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||| ||||||||| ||||||||||||  ||||||||| |||||||||| |||||| |||||||  ||||| ||||||||    
T  7015502 aaaataggcttaaataggtctttcgtccctgcaaatataggccatttgaattttcatccatgaagttactaatcattccaatc 7015584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 479 - 552
Target Start/End: Original strand, 31118942 - 31119015
Alignment:
Q  479 aaaataaaaaatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||| ||| || ||||||||||||||||||||||  ||||||||| |||||||||| |||||| |||||||    
T  31118942 aaaataataaaaaggcttaaatagatctttcgtccctgcaaatataggccatttgaattttcatccctgaagtt 31119015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 33735706 - 33735621
Alignment:
Q  483 taaaaaatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||| || ||||||||| ||||||||||||  |||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  33735706 taaaaaaaaggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatc 33735621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 9915433 - 9915476
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaatt 537  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  9915433 cttaaataggtctttcgtccctataaatataggtcatttgaatt 9915476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 481 - 568
Target Start/End: Complemental strand, 25253481 - 25253394
Alignment:
Q  481 aataaaaaatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||| |||||| ||||||||  ||||||||||||  |||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  25253481 aataacaaataggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatc 25253394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 481 - 568
Target Start/End: Complemental strand, 25317272 - 25317185
Alignment:
Q  481 aataaaaaatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||| |||||| ||||||||  ||||||||||||  |||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  25317272 aataacaaataggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatc 25317185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 485 - 568
Target Start/End: Original strand, 32052217 - 32052300
Alignment:
Q  485 aaaaatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||| ||||||||  | |||||||||| ||||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  32052217 aaaaataggcttaaatatgtttttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatc 32052300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 488 - 567
Target Start/End: Original strand, 37944990 - 37945069
Alignment:
Q  488 aatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    ||||| ||||||||| |||||||||| | ||||||||||||||||||||| || ||| |||||||  ||||| |||||||    
T  37944990 aataggcttaaataggtctttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaat 37945069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 495 - 565
Target Start/End: Original strand, 8323059 - 8323129
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttcca 565  Q
    |||||||| |||||| ||||||||||||||||||||||||||| || ||| |||||||  ||||| |||||    
T  8323059 ttaaataggtctttcatccctataaatataggtcatttgaattttcgtccatgaagttactaatccttcca 8323129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 565
Target Start/End: Original strand, 21260867 - 21260938
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttcca 565  Q
    ||||||||| ||||||||||||  |||||||||||||||||||| || ||| |||||||  ||||| |||||    
T  21260867 cttaaatagttctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttcca 21260938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 491 - 549
Target Start/End: Original strand, 12628260 - 12628318
Alignment:
Q  491 agacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaa 549  Q
    |||||||||||| || ||||||| | ||||||||||||||||||||| || ||||||||    
T  12628260 agacttaaataggtccttcgtccatgtaaatataggtcatttgaattttcgtccttgaa 12628318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 544
Target Start/End: Complemental strand, 18934902 - 18934852
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatcc 544  Q
    ||||||||| | |||||||||| ||||||||||||||||||||| ||||||    
T  18934902 cttaaataggtatttcgtccctgtaaatataggtcatttgaattttcatcc 18934852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 22024065 - 22024123
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    |||| |||| ||||||||||||  |||||||||||||||||||| || |||||||||||    
T  22024065 cttatataggtctttcgtccctgcaaatataggtcatttgaattttcgtccttgaagtt 22024123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 25253275 - 25253217
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  |||||||||||||||||||| || |||||||||||    
T  25253275 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccttgaagtt 25253217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 568
Target Start/End: Complemental strand, 32052606 - 32052532
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||  ||||||||||||  |||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  32052606 cttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatc 32052532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 495 - 552
Target Start/End: Original strand, 16117964 - 16118021
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    |||||||| ||||| |||||| ||||||||||||||||||||| || ||| |||||||    
T  16117964 ttaaataggtcttttgtccctgtaaatataggtcatttgaattttcgtccctgaagtt 16118021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 491 - 568
Target Start/End: Complemental strand, 20705099 - 20705020
Alignment:
Q  491 agacttaaatagatctttcgtccctataaatata--ggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||||||  |||||||||||| ||||||||  ||||||||||||| || || ||||||||  |||||||| |||||    
T  20705099 agacttaaatatgtctttcgtccctgtaaatatataggtcatttgaattttcgtctttgaagttactaatcttttcaatc 20705020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 16118146 - 16118189
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaatt 537  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||    
T  16118146 cttaaataggtctttcgtccctgcaaatataggtcatttgaatt 16118189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 12990977 - 12990919
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  12990977 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccatgaagtt 12990919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 13064598 - 13064540
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  13064598 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccatgaagtt 13064540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 568
Target Start/End: Original strand, 22533392 - 22533466
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||| ||||||| || |  |||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  22533392 cttaaataggtctttcgcccttgcaaatataggtcatttgaattttcgtccctgaagttattaatcattccaatc 22533466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 22533585 - 22533643
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| ||||||||||||  |||| ||||||||||||||| || ||| |||||||    
T  22533585 cttaaataggtctttcgtccctgcaaatttaggtcatttgaattttcgtccctgaagtt 22533643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 33735508 - 33735566
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  33735508 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagtt 33735566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 518 - 568
Target Start/End: Original strand, 41339380 - 41339430
Alignment:
Q  518 aaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||| |||||||||||| || ||| |||||||| ||||||||||||||    
T  41339380 aaatataagtcatttgaattttcgtccctgaagttgctaatctttccaatc 41339430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 568
Target Start/End: Original strand, 6421625 - 6421698
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||  ||||||||||||  ||||||| |||||||||||| |  |||||||||||  |||||||| |||||    
T  6421625 ttaaatatgtctttcgtccctgcaaatatatgtcatttgaatttttgtccttgaagttactaatcttttcaatc 6421698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 552
Target Start/End: Original strand, 6421819 - 6421875
Alignment:
Q  496 taaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  6421819 taaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagtt 6421875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 568
Target Start/End: Complemental strand, 14745685 - 14745621
Alignment:
Q  504 tctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||||||| ||||||||| |||||||||| || ||  |||||||  ||||| ||||||||    
T  14745685 tctttcgtccctacaaatataggccatttgaattttcgtcgctgaagttactaatccttccaatc 14745621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 492 - 552
Target Start/End: Original strand, 41339547 - 41339607
Alignment:
Q  492 gacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||||  ||||||||||||  |||||||| ||||||||||| || ||| |||||||    
T  41339547 gacttaaatatgtctttcgtccctgcaaatatagatcatttgaattttcgtccctgaagtt 41339607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 491 - 568
Target Start/End: Original strand, 8432 - 8509
Alignment:
Q  491 agacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||||||| ||||||||| || ||||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  8432 agacttaaataggtctttcgtctctttaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatc 8509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 494 - 567
Target Start/End: Complemental strand, 8814 - 8741
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    ||||||||| | |||||||||| |||||||||||||||||||||  |||||  ||||||  ||||| |||||||    
T  8814 cttaaataggtatttcgtccctgtaaatataggtcatttgaatttccatccgcgaagttattaatccttccaat 8741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 495 - 568
Target Start/End: Original strand, 35311977 - 35312050
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||| |||||||||||||||||||||||||||||||||| || ||  |||||||  ||||| ||||||||    
T  35311977 ttaaataggtctttcgtccctataaatataggtcatttgaattttcgtcactgaagttactaatcattccaatc 35312050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 489 - 568
Target Start/End: Complemental strand, 19755792 - 19755713
Alignment:
Q  489 atagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||| ||||||||| ||||||||||||  |||||||||||||||||||| | |||| |||||||  ||||| ||||||||    
T  19755792 ataggcttaaataggtctttcgtccctgcaaatataggtcatttgaatttttatccctgaagttactaatccttccaatc 19755713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 568
Target Start/End: Complemental strand, 33347798 - 33347724
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||| |||| ||||||||||||  |||||||||||||||||||| || |||||||||||  ||||| ||||||||    
T  33347798 cttatataggtctttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatc 33347724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 568
Target Start/End: Complemental strand, 49003257 - 49003183
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||| ||||||||||||  |||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  49003257 cttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatc 49003183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 479 - 568
Target Start/End: Original strand, 25414831 - 25414920
Alignment:
Q  479 aaaataaaaaatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||||| ||| ||||||||  ||||||||||||| ||||||||| |||||||||| || ||  |||||||  ||||| ||||||||    
T  25414831 aaaataaaaattaggcttaaatatgtctttcgtccctacaaatataggccatttgaattttcttctctgaagttactaatccttccaatc 25414920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 504 - 568
Target Start/End: Original strand, 37152550 - 37152614
Alignment:
Q  504 tctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||||||| |||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  37152550 tctttcgtccctacaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatc 37152614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 491 - 562
Target Start/End: Complemental strand, 34176309 - 34176238
Alignment:
Q  491 agacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatcttt 562  Q
    ||||||||||||  ||||||||| ||||||||||||| ||||||||| |||||| | |||||  ||||||||    
T  34176309 agacttaaatagggctttcgtccatataaatataggtaatttgaattttcatccctaaagttactaatcttt 34176238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 2953659 - 2953717
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||| ||||||| |||||||||||| || |||||||||||    
T  2953659 cttaaataggtctttcatccctacaaatataagtcatttgaattttcgtccttgaagtt 2953717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 568
Target Start/End: Complemental strand, 2953846 - 2953772
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||  ||||||||||||  |||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  2953846 cttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatc 2953772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 5183701 - 5183759
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||| |||||||||||||||||||| || ||| |||||||    
T  5183701 cttaaataggtctttcatccctacaaatataggtcatttgaattttcgtccatgaagtt 5183759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 19755600 - 19755658
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||| |||||||||||||||||||| || ||| |||||||    
T  19755600 cttaaataggtctttcatccctacaaatataggtcatttgaattttcgtccctgaagtt 19755658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 24701465 - 24701523
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| ||||||||||||  |||||||||||||||||||| || ||| |||||||    
T  24701465 cttaaatagctctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagtt 24701523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 553
Target Start/End: Original strand, 34176119 - 34176177
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttg 553  Q
    |||||||| ||||||||||||  ||||||| |||||||||||| || ||||||||||||    
T  34176119 ttaaataggtctttcgtccctgcaaatataagtcatttgaattttcgtccttgaagttg 34176177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 46850040 - 46849982
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| ||||||||||||  |||||||||||||||||||| || ||| |||||||    
T  46850040 cttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagtt 46849982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 568
Target Start/End: Original strand, 48380683 - 48380757
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||| |||||||||| | ||||||||||||||||||||| || ||  |||||||  ||||| ||||||||    
T  48380683 cttaaataggtctttcgtccttgtaaatataggtcatttgaattttcgtcgctgaagttactaatccttccaatc 48380757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 495 - 568
Target Start/End: Original strand, 29980642 - 29980715
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||  |||||||||| | ||||||||||||||||||||| ||  || |||||||  ||||||||||||||    
T  29980642 ttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcgcccatgaagttactaatctttccaatc 29980715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 46364571 - 46364644
Alignment:
Q  489 atagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatcttt 562  Q
    |||| ||||||||  ||||||||||||  |||||||||||||||||||| || ||| |||||||  ||||||||    
T  46364571 ataggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatcttt 46364644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 495 - 568
Target Start/End: Original strand, 49002879 - 49002952
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||  ||||||||||||  |||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  49002879 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatc 49002952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 479 - 567
Target Start/End: Original strand, 5926506 - 5926594
Alignment:
Q  479 aaaataaaaaatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    |||| |||||| | ||| |||||  ||||||||||||  |||||||||||||||||||| || ||| |||||||  ||||| |||||||    
T  5926506 aaaaaaaaaaaaaaactgaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaat 5926594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 2953466 - 2953509
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaatt 537  Q
    ||||||||  |||||||||||| |||||||||||||||||||||    
T  2953466 cttaaatatgtctttcgtccctgtaaatataggtcatttgaatt 2953509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 552
Target Start/End: Original strand, 33030331 - 33030394
Alignment:
Q  489 atagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    |||| ||||||||| ||||| ||||||  |||||||||||||||||||| || ||| |||||||    
T  33030331 ataggcttaaataggtcttttgtccctgcaaatataggtcatttgaattttcgtccctgaagtt 33030394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 1047393 - 1047335
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||| ||| |||| |||||| |||||||||||||||||||| || ||| |||||||    
T  1047393 cttaaatggatatttcatccctacaaatataggtcatttgaattttcgtccctgaagtt 1047335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 568
Target Start/End: Complemental strand, 1047586 - 1047512
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||  |||||| ||||| ||||||||||||||||||||| || ||  |||||||  ||||| ||||||||    
T  1047586 cttaaatatgtctttcatccctgtaaatataggtcatttgaattttcgtctctgaagttactaatccttccaatc 1047512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 5926903 - 5926845
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| ||||||||||||  ||||||||  |||||||||| |||||| |||||||    
T  5926903 cttaaataggtctttcgtccctgcaaatatagaccatttgaattttcatccctgaagtt 5926845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 536
Target Start/End: Complemental strand, 8890591 - 8890549
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaat 536  Q
    ||||||||| ||||||||||||  |||||||||||||||||||    
T  8890591 cttaaataggtctttcgtccctgcaaatataggtcatttgaat 8890549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 532
Target Start/End: Complemental strand, 10019768 - 10019730
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcattt 532  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  10019768 cttaaataggtctttcgtccctgtaaatataggtcattt 10019730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 12577394 - 12577336
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| ||||||||||||  ||||||| ||||||| |||| || |||||||||||    
T  12577394 cttaaataggtctttcgtccctgcaaatataagtcatttaaattttcgtccttgaagtt 12577336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 29042944 - 29042886
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| ||| |  |||||||||||||||||||| |||||| |||||||    
T  29042944 cttaaataggtctttcatccttgcaaatataggtcatttgaattttcatccctgaagtt 29042886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 33347611 - 33347669
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  33347611 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagtt 33347669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 46364770 - 46364828
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  46364770 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagtt 46364828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 567
Target Start/End: Original strand, 739221 - 739294
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    ||||||||| | ||||||||||  ||||||||  |||||||||| || |||||||||||  ||||| |||||||    
T  739221 cttaaataggtttttcgtccctgcaaatatagaccatttgaattttcgtccttgaagttactaatccttccaat 739294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 536
Target Start/End: Original strand, 8890207 - 8890256
Alignment:
Q  487 aaatagacttaaatagatctttcgtccctataaatataggtcatttgaat 536  Q
    |||||| ||||||||| | ||||||||||  |||||||||||||||||||    
T  8890207 aaataggcttaaataggtatttcgtccctgcaaatataggtcatttgaat 8890256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 559
Target Start/End: Original strand, 10019568 - 10019633
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatc 559  Q
    ||||||||| | ||||||||||  ||||||| |||||||||||| || ||| |||||||| |||||    
T  10019568 cttaaataggtatttcgtccctgcaaatataagtcatttgaattttcgtccctgaagttgctaatc 10019633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 568
Target Start/End: Original strand, 5183498 - 5183582
Alignment:
Q  484 aaaaaatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||  ||||||||  |||||||| |||  |||||||||||||||||||| || ||| | |||||  ||||| ||||||||    
T  5183498 aaaaaataagcttaaatatgtctttcgttcctgaaaatataggtcatttgaattttcgtccataaagttactaatccttccaatc 5183582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 537
Target Start/End: Original strand, 6056365 - 6056421
Alignment:
Q  481 aataaaaaatagacttaaatagatctttcgtccctataaatataggtcatttgaatt 537  Q
    ||||||||  || ||||||||  ||||||||||||  ||||||||||||||||||||    
T  6056365 aataaaaataaggcttaaatatgtctttcgtccctgcaaatataggtcatttgaatt 6056421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 552
Target Start/End: Original strand, 46849674 - 46849718
Alignment:
Q  508 tcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    |||||||| ||||||||||||||||||||| || ||| |||||||    
T  46849674 tcgtccctgtaaatataggtcatttgaattttcgtccctgaagtt 46849718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 484 - 567
Target Start/End: Complemental strand, 9632695 - 9632612
Alignment:
Q  484 aaaaaatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    |||||| || ||||||||| ||||| ||||||  |||||||||||||||||||| || |||||||||||  ||||| |||||||    
T  9632695 aaaaaaaaggcttaaataggtcttttgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaat 9632612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 495 - 552
Target Start/End: Original strand, 37713699 - 37713756
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    |||||||| ||||||||||||||||||||| |||||||||||| || ||| |||||||    
T  37713699 ttaaataggtctttcgtccctataaatataagtcatttgaattttcgtccatgaagtt 37713756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 35163697 - 35163740
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaatt 537  Q
    ||||||||  ||||||||||||||||||||||||||||||||||    
T  35163697 cttaaataagtctttcgtccctataaatataggtcatttgaatt 35163740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 568
Target Start/End: Complemental strand, 547817 - 547743
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||||||||||||||||  |||||||| ||||||||||| || ||| | |||||  ||||| ||||||||    
T  547817 cttaaatagatctttcgtccctgcaaatatagatcatttgaattttcgtccctaaagttactaatccttccaatc 547743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 11478147 - 11478205
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| | ||||||||||  |||||||||||||||||||| || |||||||||||    
T  11478147 cttaaataggtttttcgtccctgcaaatataggtcatttgaattttcgtccttgaagtt 11478205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 20096209 - 20096151
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||| |||||||||||||||||||| || ||| |||||||    
T  20096209 cttaaataggtctttcatccctacaaatataggtcatttgaattttcttccctgaagtt 20096151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 37342977 - 37343035
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  |||||||||||||||||||| |||||| |||||||    
T  37342977 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcatccctgaagtt 37343035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 552
Target Start/End: Complemental strand, 40422554 - 40422484
Alignment:
Q  482 ataaaaaatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||| ||||| ||||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  40422554 ataaataataggcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagtt 40422484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 40525696 - 40525638
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||| || ||| |||||||    
T  40525696 cttaaataggtctttcatccctgtaaatataggtcatttgaattttcgtccctgaagtt 40525638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 41182085 - 41182027
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| ||||||||||||  |||||||||||||||||||| || ||| |||||||    
T  41182085 cttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagtt 41182027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 494 - 567
Target Start/End: Complemental strand, 7775 - 7702
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    ||||||||| ||||||||||||  ||||||||| |||||||||| || ||| |||||||  ||||| |||||||    
T  7775 cttaaataggtctttcgtccctgcaaatataggccatttgaattttcgtccatgaagttactaatccttccaat 7702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 23424514 - 23424557
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaatt 537  Q
    ||||||||| |||||| ||||| |||||||||||||||||||||    
T  23424514 cttaaataggtctttcatccctgtaaatataggtcatttgaatt 23424557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 497 - 552
Target Start/End: Original strand, 36623551 - 36623606
Alignment:
Q  497 aaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    |||||| |||||| |||||  |||||||||||||||||||| |||||| |||||||    
T  36623551 aaataggtctttcatccctgcaaatataggtcatttgaattttcatccctgaagtt 36623606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 547630 - 547688
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  || ||||||||||||||||| || |||||||||||    
T  547630 cttaaataggtctttcatccctgcaattataggtcatttgaattttcgtccttgaagtt 547688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 568
Target Start/End: Original strand, 22763597 - 22763671
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||| | |||||||| |  |||||||||||||||||||| || ||| |||||||  ||||||||| ||||    
T  22763597 cttaaataggtatttcgtccttgcaaatataggtcatttgaattttcgtccctgaagttactaatctttctaatc 22763671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 568
Target Start/End: Original strand, 25287794 - 25287868
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||  |||||||||||| ||||||| || |||||||||| || ||| |||||||  ||||| ||||||||    
T  25287794 cttaaatatgtctttcgtccctgtaaatattggccatttgaattttcgtccctgaagttactaatccttccaatc 25287868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 25287981 - 25287923
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  25287981 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagtt 25287923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 26740100 - 26740042
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||  ||||||||||||  |||||||||||||||||||| || ||| |||||||    
T  26740100 cttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagtt 26740042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 486 - 568
Target Start/End: Complemental strand, 27857132 - 27857050
Alignment:
Q  486 aaaatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||  |||||||  ||||||||||||  ||||||||| |||||||||| || ||| |||||||  ||||| ||||||||    
T  27857132 aaaataggtttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatc 27857050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 31690084 - 31690026
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| | ||||||||||  |||||||||||||||||||| || ||| |||||||    
T  31690084 cttaaataggtttttcgtccctgaaaatataggtcatttgaattttcgtccctgaagtt 31690026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 568
Target Start/End: Complemental strand, 40525889 - 40525815
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||| ||||| ||||||| ||||||||||| ||||||||| || ||| |||| ||  ||||| ||||||||    
T  40525889 cttaaatatatcttccgtccctgtaaatataggttatttgaattttcgtccctgaaattactaatcattccaatc 40525815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 495 - 537
Target Start/End: Complemental strand, 40933363 - 40933321
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaatt 537  Q
    |||||||| ||||||||| || |||||||||||||||||||||    
T  40933363 ttaaataggtctttcgtctctgtaaatataggtcatttgaatt 40933321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 41251312 - 41251254
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  41251312 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccatgaagtt 41251254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 43866900 - 43866842
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||  |||||| |||||  |||||||||||||||||||| |||||| |||||||    
T  43866900 cttaaataagtctttcatccctgcaaatataggtcatttgaattttcatccctgaagtt 43866842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 552
Target Start/End: Original strand, 7396 - 7453
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    |||||||  ||||||||||||  |||||||||||||||||||| || ||| |||||||    
T  7396 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcttccctgaagtt 7453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 551
Target Start/End: Original strand, 7588 - 7645
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagt 551  Q
    |||||||||  ||||| ||||| ||||||||||||||||||||| || ||| ||||||    
T  7588 cttaaataggcctttcatccctgtaaatataggtcatttgaattttcgtccctgaagt 7645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 567
Target Start/End: Original strand, 41251125 - 41251198
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    ||||||||| ||||||||||||  |||||||||||| ||||||| || ||  |||||||  ||||| |||||||    
T  41251125 cttaaataggtctttcgtccctgcaaatataggtcaattgaattttcgtctctgaagttactaatccttccaat 41251198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 567
Target Start/End: Original strand, 20096023 - 20096095
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    |||||||| ||||||||||||  ||||||| |||||||||||| |  ||| |||||||  ||||| |||||||    
T  20096023 ttaaataggtctttcgtccctgcaaatatatgtcatttgaatttttgtccctgaagttactaatccttccaat 20096095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 568
Target Start/End: Complemental strand, 20096396 - 20096332
Alignment:
Q  504 tctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||||||  ||||||||| |||||||||| || ||| |||||||  ||||| ||||||||    
T  20096396 tctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatc 20096332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 492 - 568
Target Start/End: Complemental strand, 31690279 - 31690204
Alignment:
Q  492 gacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||||  | |||||||||| ||||||||||||| ||||||| || ||| |||||||  ||||| ||||||||    
T  31690279 gacttaaatatgtatttcgtccctgtaaatataggtca-ttgaattttcgtccctgaagttactaatcattccaatc 31690204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 492 - 568
Target Start/End: Original strand, 41801816 - 41801892
Alignment:
Q  492 gacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||||  | ||||||||||  |||||||||||||||||||| || | | |||||||  ||||| ||||||||    
T  41801816 gacttaaatatgtttttcgtccctgcaaatataggtcatttgaattttcgttcctgaagttactaatccttccaatc 41801892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 3)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 11052 - 11110
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| ||||||||||||  |||||||||||||||||||| || |||||||||||    
T  11052 cttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccttgaagtt 11110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 495 - 552
Target Start/End: Complemental strand, 11238 - 11181
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||| || |||||||||||| ||||||||||||||||||||| || |||||||||||    
T  11238 ttaaacaggtctttcgtccctgtaaatataggtcatttgaattttcgtccttgaagtt 11181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 537
Target Start/End: Original strand, 10855 - 10898
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaatt 537  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||    
T  10855 cttaaataggtctttcgtccctgcaaatataggtcatttgaatt 10898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 10749320 - 10749378
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||||||||| ||||||||||||||||||||| || ||| |||||||    
T  10749320 cttaaataggtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagtt 10749378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 33458300 - 33458242
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||||| ||| |||||||    
T  33458300 cttaaataggtctttcgtccctgcaaatataggtcatttgaattgtcgtccctgaagtt 33458242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 479 - 552
Target Start/End: Original strand, 11312722 - 11312795
Alignment:
Q  479 aaaataaaaaatagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    |||| |||||| || ||||||||  |||||||||||| ||||||||||||||||||||| || ||| |||||||    
T  11312722 aaaaaaaaaaaaaggcttaaatatgtctttcgtccctctaaatataggtcatttgaattttcgtccctgaagtt 11312795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 495 - 568
Target Start/End: Complemental strand, 30890588 - 30890515
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||| ||||||||  || ||||||||||||||||||||| |||||| |||||||  |||||||| |||||    
T  30890588 ttaaataggtctttcgtttctgtaaatataggtcatttgaattttcatccctgaagttactaatcttttcaatc 30890515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 495 - 568
Target Start/End: Original strand, 55036672 - 55036745
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||| ||||||||||||  |||||||||||||||||||| |||| | |||||||  ||||| ||||||||    
T  55036672 ttaaataggtctttcgtccctgcaaatataggtcatttgaattttcattcctgaagttactaatccttccaatc 55036745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 490 - 537
Target Start/End: Complemental strand, 53037413 - 53037366
Alignment:
Q  490 tagacttaaatagatctttcgtccctataaatataggtcatttgaatt 537  Q
    |||||||||||| |||||||||| || |||||||||||||||||||||    
T  53037413 tagacttaaatatatctttcgtctctgtaaatataggtcatttgaatt 53037366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 568
Target Start/End: Original strand, 1741389 - 1741463
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||  ||||||||||||  |||||||||||||||||||| || ||| |||||||  ||||| ||||||||    
T  1741389 cttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatc 1741463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 21300328 - 21300386
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  |||||||||||||||||||| |||||| |||||||    
T  21300328 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcatccctgaagtt 21300386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 537
Target Start/End: Complemental strand, 33458104 - 33458062
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaatt 537  Q
    |||||||| ||||||||||||| ||||||||||||||||||||    
T  33458104 ttaaataggtctttcgtccctacaaatataggtcatttgaatt 33458062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 506 - 563
Target Start/End: Original strand, 30890221 - 30890278
Alignment:
Q  506 tttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttc 563  Q
    |||||||||||||||||||| ||||||||||| |||||  |||||||  |||||||||    
T  30890221 tttcgtccctataaatatagatcatttgaattttcatctctgaagttactaatctttc 30890278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 495 - 552
Target Start/End: Original strand, 46670452 - 46670508
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    |||||||||||||||||||||  ||||||| |||||||||||| |||||| |||||||    
T  46670452 ttaaatagatctttcgtccctc-aaatatatgtcatttgaattttcatccctgaagtt 46670508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 494 - 567
Target Start/End: Original strand, 53037029 - 53037102
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    ||||||||  |||||| ||||| ||||||||||||||||||||| || ||| |||||||  ||||| |||||||    
T  53037029 cttaaataagtctttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaat 53037102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 495 - 568
Target Start/End: Complemental strand, 55037050 - 55036977
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    |||||||  ||||||||||||  |||||||||||||||||||| || | |||||||||  ||||| ||||||||    
T  55037050 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgttcttgaagttactaatccttccaatc 55036977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 504 - 568
Target Start/End: Complemental strand, 10749768 - 10749704
Alignment:
Q  504 tctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||||||  ||||||||||||||| |||| || ||| |||||||  ||||||||||||||    
T  10749768 tctttcgtccctgcaaatataggtcatttaaattttcgtccctgaagttactaatctttccaatc 10749704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 537
Target Start/End: Original strand, 30803844 - 30803891
Alignment:
Q  490 tagacttaaatagatctttcgtccctataaatataggtcatttgaatt 537  Q
    ||||||||||||| ||||||||||||  || |||||||||||||||||    
T  30803844 tagacttaaataggtctttcgtcccttcaactataggtcatttgaatt 30803891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 549
Target Start/End: Complemental strand, 51279596 - 51279541
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaa 549  Q
    |||||||| ||||| ||||| | ||||||||||||||||||||| || ||||||||    
T  51279596 cttaaataaatcttccgtccttgtaaatataggtcatttgaattttcgtccttgaa 51279541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 22129195 - 22129137
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||  |||||| ||||| ||||||||||||||||||||| || ||| |||||||    
T  22129195 cttaaataagtctttcatccctgtaaatataggtcatttgaattttcgtccctgaagtt 22129137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 55036858 - 55036800
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  55036858 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagtt 55036800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 492 - 552
Target Start/End: Complemental strand, 30890398 - 30890338
Alignment:
Q  492 gacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||||||| |||||||||   ||||||| |||||||||||| || ||| |||||||    
T  30890398 gacttaaatagatatttcgtcccagcaaatataagtcatttgaattttcgtccctgaagtt 30890338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 559
Target Start/End: Complemental strand, 40257062 - 40256998
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatc 559  Q
    |||||||| |||||| |||||  |||||||||||||||||||| || | | |||||||| |||||    
T  40257062 ttaaataggtctttcatccctgcaaatataggtcatttgaattttcgttcctgaagttgctaatc 40256998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 552
Target Start/End: Complemental strand, 14621 - 14558
Alignment:
Q  489 atagacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    |||| ||||||||| || ||| ||||| ||||||||||||||||||||| || |||||||||||    
T  14621 ataggcttaaataggtccttcctccctgtaaatataggtcatttgaattttcgtccttgaagtt 14558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 495 - 567
Target Start/End: Original strand, 14238 - 14310
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    |||||||| ||||||||||||  ||||||| |||||||||||| || ||||||| |||  ||||| |||||||    
T  14238 ttaaataggtctttcgtccctgcaaatataagtcatttgaattttcgtccttgaggttactaatccttccaat 14310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 568
Target Start/End: Complemental strand, 11044 - 10970
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||  ||||||||||||  |||||||||||||||||||| || ||| |||||||  |||||||| |||||    
T  11044 cttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatcttttcaatc 10970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 552
Target Start/End: Complemental strand, 10849 - 10793
Alignment:
Q  496 taaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  10849 taaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagtt 10793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 494 - 567
Target Start/End: Original strand, 10327 - 10400
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaat 567  Q
    ||||||||| ||||||||||||  |||||||| ||||||||||| || ||| |||||||  ||||| |||||||    
T  10327 cttaaataggtctttcgtccctgcaaatatagatcatttgaattttcgtccctgaagttactaatccttccaat 10400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 492 - 552
Target Start/End: Complemental strand, 120390 - 120330
Alignment:
Q  492 gacttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||||||||||||||||||  ||||||| || ||||||||| || ||| |||||||    
T  120390 gacttaaatagatctttcgtccctgcaaatatatgttatttgaattttcgtccatgaagtt 120330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 788 - 846
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    ||||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  788 cttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagtt 846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 568
Target Start/End: Complemental strand, 975 - 901
Alignment:
Q  494 cttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagttggtaatctttccaatc 568  Q
    ||||||||  |||||||||||| ||||||| || |||||||||| || ||| |||||||  ||||| ||||||||    
T  975 cttaaatatgtctttcgtccctgtaaatattggccatttgaattttcgtccctgaagttactaatccttccaatc 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 552
Target Start/End: Original strand, 14089 - 14146
Alignment:
Q  495 ttaaatagatctttcgtccctataaatataggtcatttgaattgtcatccttgaagtt 552  Q
    |||||||| |||||| |||||  |||||||||||||||||||| || ||| |||||||    
T  14089 ttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccatgaagtt 14146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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