View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0134_2D_low_21 (Length: 358)
Name: NF0134_2D_low_21
Description: NF0134_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0134_2D_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 20 - 356
Target Start/End: Original strand, 4882553 - 4882889
Alignment:
| Q |
20 |
aatagctggttcctaatagtatatcacaaagttagtgattataatttaaaaaattgcaaaccgtttctaatgttaaaataaatcatgtgcaaccgatttg |
119 |
Q |
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| T |
4882553 |
aatagctggttcctaatagtatatcacaaagttagtgattataatttaaaaaattgcaaaccgtttctaatgttaaaataaatcatgtgcaaccgatttg |
4882652 |
T |
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| Q |
120 |
acaatgcaattgactatagaacgttagattatttttctctttatctaatcgttaaagtcgactgtagagaatccaaacccttacgaaaacatagaaaaat |
219 |
Q |
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| T |
4882653 |
aagatgcaattgactatagaaagttagattatttttctctttatctaaccgttaaagtcgactgcagagaatccaaacccttacgaaaacatagaaaaat |
4882752 |
T |
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| Q |
220 |
agaagataaacataaaataggtagataaattttacatacaaatgcggtgaagtcatgacaatggccttgaaatgaatgacataaccacacatcatcatca |
319 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
4882753 |
agaagataaacataaagtaggtagataaattttacatacaaatgcggtgaagtcatgacaatgaccttgaaatgaatgacataaccacacatcatcatca |
4882852 |
T |
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| Q |
320 |
aaatcatatgtatctaacattagtgcccgaactccat |
356 |
Q |
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| T |
4882853 |
aaatcatatgtatctaacattagtgcccgaactccat |
4882889 |
T |
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