View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0134_2D_low_64 (Length: 231)
Name: NF0134_2D_low_64
Description: NF0134_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0134_2D_low_64
Alignment Details
Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 33817337 - 33817140
Alignment:
Q
1
tctaggtaaggttcgaaactcaaacattctgaatctaatggctcagactccccaacaacgagtctttctggtgagataccaaataggagatcatcactag
100
Q
||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
T
33817337
tctaggtaaggttcgaaactcgaacatcctgaatctaatggctcagactccccaacaacgagtctttctggtgagataccaaataggagaccatcactag
33817238
T
Q
101
cctagaaatcatgtcacaagacgtcgacatgccattaccaataaaagtgggttctcatttagtgtattaaaacttggatccatctatagtatacatat
198
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
T
33817237
cctagaaatcatgtcacaagacgtcgacatgccattaccaataaaagtgggttctcattcagtgtattaaaacttggatccatctatagtatacatat
33817140
T
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