View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0135-INSERTION-6 (Length: 488)

Name: NF0135-INSERTION-6
Description: NF0135
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0135-INSERTION-6
NF0135-INSERTION-6
[»] chr5 (64 HSPs)
chr5 (8-488)||(18624997-18625477)
chr5 (350-488)||(17574315-17574453)
chr5 (8-108)||(35660565-35660665)
chr5 (356-487)||(36057603-36057734)
chr5 (8-108)||(37266750-37266850)
chr5 (8-105)||(11775812-11775909)
chr5 (356-488)||(7267846-7267978)
chr5 (8-108)||(13032137-13032237)
chr5 (8-108)||(14349822-14349922)
chr5 (8-108)||(32129573-32129673)
chr5 (356-488)||(2179790-2179922)
chr5 (8-100)||(4895699-4895791)
chr5 (356-488)||(34327638-34327770)
chr5 (8-109)||(34827211-34827312)
chr5 (8-108)||(40753118-40753218)
chr5 (356-488)||(8539678-8539810)
chr5 (358-488)||(30468269-30468399)
chr5 (16-109)||(39902442-39902535)
chr5 (351-442)||(12738736-12738827)
chr5 (351-442)||(12801559-12801650)
chr5 (356-442)||(30463903-30463989)
chr5 (8-108)||(29341014-29341113)
chr5 (356-459)||(24541230-24541333)
chr5 (353-440)||(41493844-41493931)
chr5 (356-442)||(8541271-8541357)
chr5 (8-92)||(8440943-8441027)
chr5 (350-442)||(32134228-32134320)
chr5 (10-106)||(43309129-43309225)
chr5 (356-442)||(7269446-7269532)
chr5 (363-476)||(18728603-18728716)
chr5 (363-444)||(43492131-43492212)
chr5 (356-479)||(2854325-2854447)
chr5 (352-487)||(40780549-40780684)
chr5 (356-487)||(42473597-42473728)
chr5 (13-101)||(18653385-18653472)
chr5 (13-84)||(3057135-3057205)
chr5 (350-442)||(28813765-28813859)
chr5 (356-487)||(29621771-29621902)
chr5 (356-442)||(34328827-34328913)
chr5 (12-69)||(36290625-36290682)
chr5 (363-476)||(38596878-38596991)
chr5 (13-108)||(3057440-3057534)
chr5 (8-47)||(4592819-4592858)
chr5 (13-103)||(27428843-27428932)
chr5 (356-442)||(40782211-40782297)
chr5 (399-476)||(32087560-32087637)
chr5 (363-476)||(35395343-35395456)
chr5 (363-488)||(38178082-38178207)
chr5 (363-488)||(38205306-38205431)
chr5 (363-476)||(43318061-43318174)
chr5 (12-108)||(31546509-31546604)
chr5 (363-482)||(15459184-15459303)
chr5 (8-103)||(32793393-32793487)
chr5 (363-442)||(32835886-32835965)
chr5 (23-102)||(35650352-35650430)
chr5 (363-442)||(40330517-40330596)
chr5 (356-442)||(29620141-29620227)
chr5 (44-101)||(9460599-9460655)
chr5 (9-110)||(10361969-10362069)
chr5 (396-477)||(24496786-24496867)
chr5 (409-478)||(27349212-27349281)
chr5 (369-442)||(35291064-35291137)
chr5 (8-69)||(41660125-41660186)
chr5 (13-109)||(31653059-31653154)
[»] chr1 (63 HSPs)
chr1 (109-488)||(15104200-15104576)
chr1 (7-108)||(50294019-50294120)
chr1 (8-114)||(50484405-50484511)
chr1 (8-108)||(12151786-12151886)
chr1 (8-108)||(48327110-48327210)
chr1 (350-488)||(25278357-25278495)
chr1 (350-488)||(31238484-31238622)
chr1 (350-487)||(4855956-4856093)
chr1 (356-488)||(2869582-2869714)
chr1 (351-488)||(27087281-27087418)
chr1 (356-488)||(6818667-6818799)
chr1 (356-488)||(34778127-34778259)
chr1 (356-488)||(37344345-37344477)
chr1 (356-488)||(50556086-50556218)
chr1 (356-488)||(3013459-3013597)
chr1 (34-108)||(12380833-12380907)
chr1 (34-108)||(12384900-12384974)
chr1 (358-488)||(51896141-51896271)
chr1 (356-488)||(33602633-33602765)
chr1 (356-455)||(25278975-25279074)
chr1 (8-109)||(7840634-7840735)
chr1 (10-104)||(40328299-40328390)
chr1 (25-108)||(45978041-45978124)
chr1 (356-487)||(46583546-46583677)
chr1 (12-109)||(23861907-23862007)
chr1 (356-444)||(52643648-52643736)
chr1 (356-434)||(52641891-52641969)
chr1 (8-108)||(18976260-18976361)
chr1 (350-433)||(25278851-25278934)
chr1 (351-442)||(31236817-31236908)
chr1 (8-107)||(32361264-32361363)
chr1 (356-442)||(3011858-3011944)
chr1 (356-442)||(50554166-50554252)
chr1 (363-476)||(35479976-35480089)
chr1 (363-488)||(42134492-42134617)
chr1 (350-442)||(27089279-27089371)
chr1 (10-93)||(24977261-24977343)
chr1 (351-442)||(26223585-26223676)
chr1 (356-442)||(2871076-2871162)
chr1 (356-442)||(34776572-34776658)
chr1 (356-442)||(46582013-46582099)
chr1 (356-440)||(8167945-8168029)
chr1 (8-96)||(39426229-39426317)
chr1 (356-487)||(9121658-9121789)
chr1 (351-442)||(25276740-25276831)
chr1 (356-487)||(47013072-47013203)
chr1 (356-442)||(8169568-8169654)
chr1 (363-488)||(51121915-51122040)
chr1 (8-52)||(12380922-12380966)
chr1 (8-52)||(12384989-12385033)
chr1 (41-108)||(1228496-1228563)
chr1 (356-434)||(37088144-37088222)
chr1 (8-69)||(30077639-30077700)
chr1 (12-69)||(52280034-52280091)
chr1 (39-107)||(30860726-30860794)
chr1 (396-442)||(51894610-51894656)
chr1 (363-460)||(18183960-18184057)
chr1 (399-488)||(36895499-36895588)
chr1 (451-488)||(43868712-43868749)
chr1 (363-488)||(46638796-46638921)
chr1 (12-69)||(6948825-6948884)
chr1 (396-472)||(27940651-27940727)
chr1 (351-383)||(45044947-45044979)
[»] chr8 (76 HSPs)
chr8 (8-108)||(28069738-28069838)
chr8 (356-488)||(13282481-13282613)
chr8 (351-488)||(8609796-8609933)
chr8 (350-488)||(26242323-26242461)
chr8 (350-488)||(41825653-41825791)
chr8 (8-109)||(30426624-30426725)
chr8 (349-488)||(9673174-9673313)
chr8 (8-108)||(36991375-36991475)
chr8 (356-488)||(41042593-41042725)
chr8 (356-488)||(42941777-42941909)
chr8 (356-488)||(13108345-13108477)
chr8 (356-488)||(7745121-7745253)
chr8 (8-109)||(10672469-10672568)
chr8 (356-488)||(38547231-38547363)
chr8 (356-488)||(22272337-22272471)
chr8 (13-108)||(40695204-40695298)
chr8 (356-477)||(5036448-5036569)
chr8 (8-108)||(10652573-10652673)
chr8 (350-488)||(13486108-13486246)
chr8 (356-485)||(27691157-27691286)
chr8 (356-434)||(26238729-26238807)
chr8 (356-442)||(42943426-42943512)
chr8 (8-105)||(44859128-44859223)
chr8 (16-108)||(37966400-37966491)
chr8 (356-434)||(34681074-34681152)
chr8 (353-442)||(9671977-9672066)
chr8 (351-434)||(43262145-43262228)
chr8 (406-488)||(40339689-40339771)
chr8 (356-434)||(41823893-41823971)
chr8 (47-108)||(5033310-5033371)
chr8 (8-108)||(45113289-45113390)
chr8 (12-100)||(41511285-41511373)
chr8 (356-442)||(33761072-33761158)
chr8 (7-103)||(6014212-6014309)
chr8 (363-476)||(42897775-42897888)
chr8 (399-487)||(33708814-33708902)
chr8 (356-442)||(601704-601790)
chr8 (356-442)||(22273891-22273977)
chr8 (356-442)||(27692837-27692923)
chr8 (356-442)||(33762713-33762799)
chr8 (356-442)||(35510819-35510905)
chr8 (356-442)||(38548831-38548917)
chr8 (8-106)||(28318854-28318958)
chr8 (350-442)||(35509211-35509303)
chr8 (351-442)||(13106802-13106893)
chr8 (363-442)||(33160183-33160262)
chr8 (13-55)||(5033108-5033150)
chr8 (356-442)||(29239187-29239273)
chr8 (363-476)||(1320627-1320740)
chr8 (402-487)||(15305846-15305931)
chr8 (402-487)||(15486215-15486300)
chr8 (13-70)||(24102040-24102097)
chr8 (8-69)||(26749543-26749604)
chr8 (363-476)||(32822371-32822484)
chr8 (350-442)||(13283995-13284087)
chr8 (363-442)||(461186-461265)
chr8 (351-442)||(5038062-5038152)
chr8 (363-470)||(5075378-5075485)
chr8 (20-70)||(12177575-12177625)
chr8 (20-70)||(12422003-12422053)
chr8 (356-442)||(13484548-13484634)
chr8 (10-96)||(18689512-18689597)
chr8 (9-59)||(34612584-34612634)
chr8 (371-472)||(31201148-31201249)
chr8 (363-476)||(31821428-31821541)
chr8 (363-488)||(38882786-38882911)
chr8 (356-442)||(15308261-15308347)
chr8 (356-442)||(15488630-15488716)
chr8 (12-69)||(17867654-17867712)
chr8 (368-442)||(24526911-24526985)
chr8 (363-421)||(38881438-38881496)
chr8 (10-84)||(42761734-42761808)
chr8 (363-460)||(462387-462484)
chr8 (431-488)||(15145751-15145808)
chr8 (428-477)||(37801541-37801590)
chr8 (356-412)||(600763-600819)
[»] chr7 (87 HSPs)
chr7 (8-109)||(9559009-9559110)
chr7 (8-108)||(4888486-4888586)
chr7 (8-109)||(21151171-21151272)
chr7 (356-488)||(39859218-39859350)
chr7 (9-108)||(44647984-44648083)
chr7 (356-488)||(6602338-6602470)
chr7 (353-488)||(37796170-37796305)
chr7 (12-107)||(45260384-45260479)
chr7 (11-108)||(12139349-12139446)
chr7 (8-108)||(16366537-16366637)
chr7 (356-488)||(37115515-37115647)
chr7 (356-488)||(47386198-47386330)
chr7 (350-488)||(34776904-34777042)
chr7 (8-108)||(18198275-18198375)
chr7 (356-488)||(24228398-24228530)
chr7 (356-488)||(38474132-38474264)
chr7 (10-108)||(7362589-7362686)
chr7 (8-105)||(47226035-47226130)
chr7 (396-488)||(13168163-13168258)
chr7 (350-479)||(27666063-27666192)
chr7 (8-108)||(33450525-33450626)
chr7 (356-488)||(30940414-30940546)
chr7 (396-488)||(45359379-45359471)
chr7 (356-442)||(13169683-13169769)
chr7 (8-100)||(989148-989239)
chr7 (8-100)||(25084690-25084784)
chr7 (356-458)||(56333-56435)
chr7 (8-108)||(47500238-47500339)
chr7 (8-112)||(39855766-39855869)
chr7 (350-442)||(39857642-39857734)
chr7 (356-487)||(29996504-29996635)
chr7 (356-430)||(38549550-38549624)
chr7 (31-105)||(47271107-47271180)
chr7 (346-442)||(47384287-47384383)
chr7 (351-442)||(35403619-35403710)
chr7 (356-442)||(24226584-24226670)
chr7 (356-442)||(35401972-35402058)
chr7 (356-442)||(46437110-46437196)
chr7 (363-488)||(27955380-27955505)
chr7 (431-487)||(23906251-23906307)
chr7 (396-488)||(35693359-35693453)
chr7 (353-476)||(13018033-13018158)
chr7 (356-442)||(37113944-37114030)
chr7 (362-443)||(13039641-13039722)
chr7 (363-476)||(33038798-33038911)
chr7 (16-100)||(34985909-34985994)
chr7 (363-488)||(46996691-46996816)
chr7 (350-442)||(6605397-6605489)
chr7 (350-442)||(22155847-22155939)
chr7 (350-442)||(22211762-22211854)
chr7 (356-487)||(20478045-20478176)
chr7 (8-110)||(29631067-29631166)
chr7 (8-59)||(46802336-46802387)
chr7 (363-442)||(47341721-47341800)
chr7 (409-488)||(48852336-48852415)
chr7 (356-442)||(48227941-48228027)
chr7 (357-442)||(35691431-35691516)
chr7 (363-476)||(46812583-46812696)
chr7 (8-69)||(47799895-47799956)
chr7 (409-488)||(1546343-1546422)
chr7 (377-472)||(35344295-35344390)
chr7 (363-442)||(38613516-38613595)
chr7 (363-442)||(46810715-46810794)
chr7 (356-442)||(78014-78100)
chr7 (356-442)||(20479719-20479805)
chr7 (356-442)||(27664433-27664519)
chr7 (8-90)||(32915975-32916056)
chr7 (431-488)||(6056844-6056901)
chr7 (371-472)||(8423286-8423387)
chr7 (363-488)||(23953815-23953940)
chr7 (39-96)||(33608845-33608901)
chr7 (8-69)||(35737132-35737193)
chr7 (14-62)||(29844316-29844364)
chr7 (363-442)||(4321048-4321127)
chr7 (12-62)||(19027685-19027736)
chr7 (12-62)||(20726900-20726951)
chr7 (363-442)||(36762682-36762761)
chr7 (363-442)||(40785550-40785629)
chr7 (12-69)||(14696752-14696810)
chr7 (426-488)||(23962377-23962439)
chr7 (363-477)||(40784356-40784470)
chr7 (10-103)||(7712329-7712421)
chr7 (356-413)||(29994909-29994966)
chr7 (431-488)||(31913547-31913604)
chr7 (396-476)||(2167522-2167602)
chr7 (355-443)||(37791656-37791744)
chr7 (24-108)||(44390813-44390896)
[»] chr3 (89 HSPs)
chr3 (356-488)||(53190768-53190900)
chr3 (351-488)||(51684608-51684745)
chr3 (356-488)||(27899090-27899222)
chr3 (8-109)||(19830386-19830487)
chr3 (351-488)||(54898435-54898572)
chr3 (356-488)||(21348726-21348858)
chr3 (352-488)||(42279506-42279642)
chr3 (12-109)||(2230006-2230103)
chr3 (8-109)||(43719902-43720003)
chr3 (356-488)||(2226161-2226293)
chr3 (8-108)||(24754676-24754776)
chr3 (8-108)||(24763673-24763773)
chr3 (356-488)||(30599927-30600059)
chr3 (16-111)||(34373858-34373953)
chr3 (12-109)||(27033674-27033771)
chr3 (356-488)||(43765140-43765272)
chr3 (7-106)||(40851792-40851891)
chr3 (7-105)||(46167411-46167509)
chr3 (356-488)||(23293179-23293311)
chr3 (396-484)||(35905725-35905813)
chr3 (356-487)||(41977753-41977884)
chr3 (356-488)||(17515313-17515445)
chr3 (356-481)||(46112490-46112615)
chr3 (8-108)||(48084838-48084939)
chr3 (356-488)||(2377032-2377164)
chr3 (8-90)||(34373559-34373641)
chr3 (359-479)||(2660218-2660338)
chr3 (396-488)||(46197763-46197855)
chr3 (356-487)||(44794211-44794341)
chr3 (356-442)||(611222-611308)
chr3 (356-442)||(23291573-23291659)
chr3 (356-442)||(42282473-42282559)
chr3 (363-488)||(48633887-48634012)
chr3 (356-487)||(3152228-3152359)
chr3 (356-442)||(38193510-38193596)
chr3 (356-442)||(41979352-41979438)
chr3 (356-442)||(46308810-46308896)
chr3 (356-434)||(51686402-51686480)
chr3 (356-442)||(53094273-53094359)
chr3 (399-488)||(19987603-19987692)
chr3 (363-460)||(23774162-23774259)
chr3 (56-109)||(24647905-24647958)
chr3 (350-442)||(46609146-46609238)
chr3 (346-442)||(53187735-53187831)
chr3 (8-91)||(550790-550872)
chr3 (417-488)||(48830815-48830886)
chr3 (364-442)||(2975471-2975549)
chr3 (356-442)||(3150255-3150341)
chr3 (356-442)||(30598340-30598426)
chr3 (356-442)||(44267984-44268070)
chr3 (356-442)||(44795890-44795976)
chr3 (356-434)||(48829359-48829437)
chr3 (356-442)||(54900074-54900160)
chr3 (363-488)||(2977318-2977443)
chr3 (431-488)||(7884882-7884939)
chr3 (363-488)||(18430260-18430385)
chr3 (363-488)||(23888761-23888886)
chr3 (363-476)||(40508912-40509025)
chr3 (8-84)||(12402985-12403061)
chr3 (356-442)||(35903828-35903914)
chr3 (356-442)||(38191898-38191984)
chr3 (356-442)||(46310436-46310522)
chr3 (356-442)||(46611303-46611389)
chr3 (8-92)||(566746-566830)
chr3 (8-69)||(31523663-31523724)
chr3 (363-488)||(31887441-31887566)
chr3 (427-488)||(44276205-44276266)
chr3 (363-488)||(45257209-45257334)
chr3 (425-488)||(5133068-5133131)
chr3 (343-442)||(7883318-7883417)
chr3 (363-442)||(48635375-48635454)
chr3 (22-108)||(33632855-33632940)
chr3 (8-69)||(42613099-42613160)
chr3 (8-69)||(49679265-49679326)
chr3 (431-488)||(54092764-54092821)
chr3 (448-488)||(600804-600844)
chr3 (363-442)||(1847647-1847726)
chr3 (363-442)||(23887208-23887287)
chr3 (9-108)||(29586356-29586454)
chr3 (363-442)||(45897060-45897139)
chr3 (363-442)||(51454285-51454364)
chr3 (356-414)||(7884927-7884985)
chr3 (363-473)||(33113184-33113294)
chr3 (396-442)||(54412547-54412593)
chr3 (363-476)||(24382894-24383007)
chr3 (363-472)||(41021008-41021117)
chr3 (40-108)||(3009272-3009339)
chr3 (436-488)||(5125884-5125936)
chr3 (436-488)||(41623735-41623787)
[»] chr4 (71 HSPs)
chr4 (8-109)||(19901873-19901974)
chr4 (8-108)||(56558298-56558398)
chr4 (9-109)||(3952125-3952225)
chr4 (8-108)||(24073635-24073735)
chr4 (356-488)||(41761735-41761867)
chr4 (8-107)||(34778440-34778539)
chr4 (8-108)||(23610661-23610761)
chr4 (10-108)||(33247086-33247184)
chr4 (8-109)||(5416421-5416521)
chr4 (8-108)||(12312431-12312532)
chr4 (8-109)||(18206995-18207096)
chr4 (8-108)||(5763118-5763218)
chr4 (356-488)||(49523127-49523259)
chr4 (10-96)||(30567922-30568008)
chr4 (20-108)||(12153185-12153273)
chr4 (372-488)||(48646736-48646852)
chr4 (356-482)||(48813790-48813916)
chr4 (16-108)||(33262508-33262600)
chr4 (356-488)||(35404434-35404566)
chr4 (12-108)||(38079676-38079772)
chr4 (356-488)||(41781542-41781674)
chr4 (356-488)||(51011929-51012061)
chr4 (8-103)||(47922327-47922423)
chr4 (351-442)||(35401747-35401838)
chr4 (356-479)||(43519427-43519550)
chr4 (40-109)||(33524313-33524382)
chr4 (20-109)||(52018794-52018883)
chr4 (16-108)||(39862544-39862636)
chr4 (396-488)||(42980678-42980770)
chr4 (356-434)||(48645258-48645336)
chr4 (363-476)||(44558494-44558607)
chr4 (353-488)||(2693242-2693376)
chr4 (363-442)||(39345574-39345653)
chr4 (356-442)||(4173740-4173826)
chr4 (22-108)||(23474144-23474229)
chr4 (356-442)||(43507170-43507256)
chr4 (356-442)||(43508653-43508739)
chr4 (356-442)||(49524733-49524819)
chr4 (8-101)||(1871296-1871388)
chr4 (8-69)||(56269071-56269132)
chr4 (352-488)||(11601670-11601805)
chr4 (8-108)||(56453777-56453876)
chr4 (356-442)||(20493830-20493916)
chr4 (396-488)||(52868138-52868230)
chr4 (356-442)||(33266010-33266096)
chr4 (14-99)||(34927510-34927596)
chr4 (10-108)||(48914475-48914572)
chr4 (10-108)||(47922035-47922129)
chr4 (396-488)||(35996106-35996198)
chr4 (356-443)||(2691377-2691463)
chr4 (356-443)||(20819988-20820075)
chr4 (8-69)||(5524466-5524527)
chr4 (363-472)||(10372711-10372820)
chr4 (9-81)||(26428988-26429061)
chr4 (8-69)||(36688183-36688244)
chr4 (431-488)||(44972489-44972546)
chr4 (12-48)||(25442190-25442226)
chr4 (396-472)||(44794765-44794841)
chr4 (356-439)||(320903-320986)
chr4 (401-476)||(2827452-2827527)
chr4 (353-476)||(7149539-7149662)
chr4 (12-69)||(17493025-17493083)
chr4 (20-69)||(5361457-5361506)
chr4 (363-472)||(10762591-10762700)
chr4 (357-442)||(11254123-11254208)
chr4 (8-69)||(37002246-37002307)
chr4 (8-69)||(42010136-42010197)
chr4 (350-442)||(833220-833312)
chr4 (8-101)||(13493291-13493385)
chr4 (396-472)||(47941854-47941930)
chr4 (431-483)||(50131240-50131292)
[»] chr2 (69 HSPs)
chr2 (8-105)||(13238700-13238797)
chr2 (8-108)||(35316844-35316944)
chr2 (356-488)||(39664757-39664889)
chr2 (356-488)||(16763079-16763211)
chr2 (356-488)||(17696209-17696341)
chr2 (8-108)||(28564911-28565011)
chr2 (349-488)||(40560219-40560358)
chr2 (350-488)||(44709754-44709892)
chr2 (356-488)||(14389093-14389225)
chr2 (12-108)||(23259443-23259539)
chr2 (356-488)||(19908255-19908388)
chr2 (356-488)||(2766937-2767069)
chr2 (396-488)||(16377206-16377298)
chr2 (20-108)||(45625035-45625123)
chr2 (393-487)||(6797547-6797641)
chr2 (356-488)||(39455172-39455304)
chr2 (357-488)||(42519214-42519346)
chr2 (33-108)||(11864913-11864988)
chr2 (10-109)||(2063374-2063473)
chr2 (350-442)||(16764611-16764703)
chr2 (356-434)||(19581417-19581495)
chr2 (363-488)||(17946104-17946229)
chr2 (351-442)||(16376734-16376825)
chr2 (356-435)||(19906685-19906764)
chr2 (356-478)||(6786000-6786122)
chr2 (356-442)||(14387352-14387438)
chr2 (356-442)||(34400317-34400403)
chr2 (356-442)||(39663157-39663243)
chr2 (367-488)||(37417287-37417408)
chr2 (26-102)||(40640706-40640783)
chr2 (351-443)||(31475079-31475171)
chr2 (10-100)||(4446860-4446950)
chr2 (356-478)||(24208061-24208183)
chr2 (353-487)||(37645487-37645621)
chr2 (356-442)||(40561878-40561964)
chr2 (8-69)||(375012-375073)
chr2 (7-108)||(35315520-35315620)
chr2 (20-97)||(36929747-36929823)
chr2 (363-442)||(41144-41223)
chr2 (409-488)||(7744099-7744178)
chr2 (23-110)||(36758816-36758902)
chr2 (356-487)||(37020511-37020642)
chr2 (356-442)||(2577480-2577566)
chr2 (10-96)||(15709789-15709874)
chr2 (356-442)||(24205601-24205687)
chr2 (12-62)||(30709133-30709183)
chr2 (353-443)||(37646477-37646567)
chr2 (356-442)||(39456780-39456866)
chr2 (431-484)||(62813-62866)
chr2 (8-69)||(8988874-8988935)
chr2 (8-69)||(23459841-23459902)
chr2 (363-476)||(29909661-29909774)
chr2 (25-108)||(38824061-38824145)
chr2 (363-442)||(33203-33282)
chr2 (363-442)||(11021543-11021622)
chr2 (12-69)||(13780521-13780579)
chr2 (10-84)||(21454476-21454548)
chr2 (371-476)||(39574-39679)
chr2 (371-472)||(15372517-15372618)
chr2 (72-105)||(32009934-32009967)
chr2 (26-102)||(373127-373202)
chr2 (391-459)||(4046334-4046402)
chr2 (436-488)||(13999890-13999942)
chr2 (428-488)||(15807908-15807968)
chr2 (8-108)||(19908799-19908897)
chr2 (428-488)||(32608056-32608116)
chr2 (8-108)||(38397100-38397199)
chr2 (376-472)||(41706562-41706658)
chr2 (351-383)||(42517556-42517588)
[»] scaffold0012 (1 HSPs)
scaffold0012 (8-108)||(208082-208182)
[»] chr6 (56 HSPs)
chr6 (8-108)||(4804467-4804567)
chr6 (11-108)||(13089705-13089802)
chr6 (10-108)||(12412658-12412756)
chr6 (8-107)||(1249105-1249202)
chr6 (356-488)||(6899488-6899620)
chr6 (8-108)||(17944181-17944281)
chr6 (8-108)||(21159325-21159425)
chr6 (8-105)||(27826557-27826654)
chr6 (8-108)||(7162103-7162203)
chr6 (356-488)||(32439080-32439212)
chr6 (357-488)||(10568403-10568534)
chr6 (396-488)||(7372947-7373039)
chr6 (356-488)||(20523369-20523501)
chr6 (27-109)||(32737895-32737977)
chr6 (351-488)||(32516875-32517012)
chr6 (356-484)||(11355225-11355353)
chr6 (12-105)||(227522-227616)
chr6 (356-488)||(13613571-13613703)
chr6 (406-488)||(9398713-9398795)
chr6 (20-108)||(1516163-1516250)
chr6 (20-108)||(1518252-1518339)
chr6 (368-487)||(14338465-14338584)
chr6 (356-434)||(10569927-10570005)
chr6 (8-100)||(7215816-7215908)
chr6 (431-486)||(7049835-7049890)
chr6 (356-434)||(6902906-6902983)
chr6 (356-442)||(9400035-9400121)
chr6 (8-109)||(13888477-13888579)
chr6 (356-442)||(32518497-32518583)
chr6 (353-434)||(21068625-21068706)
chr6 (8-69)||(24484898-24484959)
chr6 (29-109)||(1515497-1515576)
chr6 (351-442)||(7371173-7371264)
chr6 (356-415)||(8605352-8605411)
chr6 (356-442)||(11357194-11357280)
chr6 (8-101)||(2800574-2800667)
chr6 (371-472)||(4641373-4641474)
chr6 (368-488)||(3018421-3018541)
chr6 (399-487)||(3456794-3456882)
chr6 (356-487)||(32455881-32456012)
chr6 (357-414)||(7049790-7049847)
chr6 (12-109)||(17828524-17828620)
chr6 (39-96)||(28696624-28696680)
chr6 (396-472)||(2968182-2968258)
chr6 (353-385)||(21091106-21091138)
chr6 (40-96)||(30460875-30460930)
chr6 (343-442)||(32454238-32454337)
chr6 (356-442)||(3480657-3480743)
chr6 (12-69)||(7545660-7545718)
chr6 (8-46)||(29698182-29698220)
chr6 (363-472)||(29077338-29077447)
chr6 (25-69)||(2142288-2142332)
chr6 (396-432)||(7051255-7051291)
chr6 (428-488)||(11163875-11163935)
chr6 (432-488)||(25172098-25172154)
chr6 (44-100)||(29229149-29229204)
[»] scaffold0008 (1 HSPs)
scaffold0008 (12-109)||(9156-9253)
[»] scaffold1454 (1 HSPs)
scaffold1454 (356-488)||(1266-1398)
[»] scaffold0035 (1 HSPs)
scaffold0035 (8-108)||(16353-16453)
[»] scaffold0250 (1 HSPs)
scaffold0250 (10-108)||(7168-7270)
[»] scaffold0058 (3 HSPs)
scaffold0058 (350-487)||(3291-3428)
scaffold0058 (350-487)||(4463-4600)
scaffold0058 (350-442)||(14343-14435)
[»] scaffold0564 (1 HSPs)
scaffold0564 (356-488)||(8265-8395)
[»] scaffold0006 (1 HSPs)
scaffold0006 (25-104)||(73817-73896)
[»] scaffold0456 (1 HSPs)
scaffold0456 (20-108)||(13710-13799)
[»] scaffold0009 (1 HSPs)
scaffold0009 (10-103)||(6396-6489)
[»] scaffold0126 (1 HSPs)
scaffold0126 (13-109)||(22398-22493)
[»] scaffold0345 (1 HSPs)
scaffold0345 (356-442)||(1555-1641)
[»] scaffold0477 (1 HSPs)
scaffold0477 (371-472)||(6639-6740)
[»] scaffold0004 (1 HSPs)
scaffold0004 (353-432)||(106670-106747)
[»] scaffold0002 (1 HSPs)
scaffold0002 (353-429)||(436265-436341)
[»] scaffold0062 (1 HSPs)
scaffold0062 (10-96)||(58701-58786)
[»] scaffold0171 (1 HSPs)
scaffold0171 (8-59)||(17311-17362)
[»] scaffold0664 (1 HSPs)
scaffold0664 (12-69)||(4695-4753)
[»] scaffold0204 (1 HSPs)
scaffold0204 (431-488)||(30460-30517)
[»] scaffold0092 (1 HSPs)
scaffold0092 (428-488)||(36839-36899)


Alignment Details
Target: chr5 (Bit Score: 469; Significance: 0; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 469; E-Value: 0
Query Start/End: Original strand, 8 - 488
Target Start/End: Complemental strand, 18625477 - 18624997
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18625477 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 18625378  T
Q  108 cagtttcaccttatgaataagtggagaatcctaaatttgagcctcaacatcgtgcatattgtaatgtcacttccaatatatgccaaaactttgttaatag 207  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18625377 caatttcaccttatgaataagtggagaatcctaaatttgagcctcaacatcgtgcatattgtaatgtcacttccaatatatgccaaaactttgttaatag 18625278  T
Q  208 ttgtttaaaacatggattgacgattgggagaacgataaggatttgtataaaactagaactgaggctattaaatttacgattaaccttatgacaatgggac 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  18625277 ttgtttaaaacatggattgacgattgggagaacgataaggatttgtataaaactagaactgaggctatcaaatttacgattaaacttatgacaatgggac 18625178  T
Q  308 tttgagtccatatacacaaaggactctagaaacatcatatacattgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccct 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18625177 tttgagtccatatacacaaaggactctagaaacatcatatacattgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccct 18625078  T
Q  408 gaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18625077 gaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 18624997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 350 - 488
Target Start/End: Original strand, 17574315 - 17574453
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactc 449  Q
    ||||| |||||||||||||||||||||||||||| |   ||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||  |    
T  17574315 attgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagac 17574414  T
Q  450 gtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  17574415 gtccatcaaaatggtccctccgtccaaaagctccgttag 17574453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 35660665 - 35660565
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35660665 ggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacc 35660566  T
Q  108 c 108  Q
    |    
T  35660565 c 35660565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 356 - 487
Target Start/End: Complemental strand, 36057734 - 36057603
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||||||||||||||||||||||||||||   ||| || |||||||||||||||||||| ||||||||||||||| ||||||||||||||  |||||||    
T  36057734 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgtccat 36057635  T
Q  456 caaaatggtccttccgtccaaaagctccgtta 487  Q
    ||||||||||| ||||||||||||||||||||    
T  36057634 caaaatggtccctccgtccaaaagctccgtta 36057603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 37266750 - 37266850
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37266750 ggacccacttagtggtatgacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacc 37266849  T
Q  108 c 108  Q
    |    
T  37266850 c 37266850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 11775812 - 11775909
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttca 105  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  11775812 ggacccacttagtggtaggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttca 11775909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 7267846 - 7267978
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   |||  | ||||||||| |||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  7267846 taatacctcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 7267945  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||| ||| |||||||||||||||||||||    
T  7267946 caaaatgatccctccgtccaaaagctccgttag 7267978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 13032137 - 13032237
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13032137 ggacccatttagtggtaggactcaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacc 13032236  T
Q  108 c 108  Q
    |    
T  13032237 c 13032237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 14349822 - 14349922
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||| |||||| |||||||||||||||    
T  14349822 ggacccacttagtggtaggacccaccatctattttttgtgtctgtctctctccaacttacaaaactccatttattttaccaaatagagaggatcttcacc 14349921  T
Q  108 c 108  Q
    |    
T  14349922 c 14349922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 32129673 - 32129573
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||    
T  32129673 ggacccacttagtggtaggacccaccatctatttttggtgtctatctctctccaacttataaaactccatttattttgccaaatggagaggatcttcacc 32129574  T
Q  108 c 108  Q
    |    
T  32129573 c 32129573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 2179790 - 2179922
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||| ||||||||||||| |   ||| |  ||||||||||||||||||||||||||||||||||| |||||||||||||||  | |||||    
T  2179790 taatacctcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacatccat 2179889  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||||||| ||||    
T  2179890 caaaatggtccctccgtccaaaagctccattag 2179922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 4895791 - 4895699
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||  |||||||    
T  4895791 ggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaataaagaggat 4895699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 34327638 - 34327770
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||||    ||  || ||||||||| |||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  34327638 taatacctcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 34327737  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||  ||||||||||||||| |||||    
T  34327738 caaaatggtctctccgtccaaaagctctgttag 34327770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 34827211 - 34827312
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||| | ||||||||||||||| ||||||||| ||||||||||    
T  34827211 ggacccacttagtggtaggatccaccatctattttttttgtctatctctctccaacttgcataactccatttattttgctaaatggagatgatcttcacc 34827310  T
Q  108 ca 109  Q
    ||    
T  34827311 ca 34827312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 40753218 - 40753118
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||| ||  |||||||||||||||| |||||||||||||||    
T  40753218 ggacccacttagtggtaggacccaccatatattttttgtgtctatctttctccaacttgcaaaactttatttattttgccaaatagagaggatcttcacc 40753119  T
Q  108 c 108  Q
    |    
T  40753118 c 40753118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 8539678 - 8539810
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||||   |||||||| | ||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  8539678 taatacctcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 8539777  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||| |||  ||| |||||||||||||||||    
T  8539778 caaaatagtcgctccatccaaaagctccgttag 8539810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 358 - 488
Target Start/End: Complemental strand, 30468399 - 30468269
Alignment:
Q  358 atacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatca 457  Q
    ||||||||| |||||||||||||||| |   ||  |  ||||||||| || ||||||| |||||||||||||||||| |||||||||||  |||||||||    
T  30468399 atacctcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgtccatca 30468300  T
Q  458 aaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||| |||||||||||||||||||||    
T  30468299 aaatggtccctccgtccaaaagctccgttag 30468269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 39902442 - 39902535
Alignment:
Q  16 ttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccca 109  Q
    |||||||||||||||||||||||||| |||||| | ||||||||||||||| ||| |||||||||||||| ||||||||||||| |||||||||    
T  39902442 ttagtggtaggacccaccatctatttcttgtgtttatctctctccaacttgtaaaactccatttattttgtcaaatggagaggaacttcaccca 39902535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 12738827 - 12738736
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| |||||||||||||||||||||||||||| |   ||| || |||||||| ||||||||||| ||||||||||||||||||||||||||    
T  12738827 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 12801650 - 12801559
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| |||||||||||||||||||||||||||| |   ||| || |||||||| ||||||||||| ||||||||||||||||||||||||||    
T  12801650 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12801559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 30463903 - 30463989
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| |  |||||||||||||||||||| ||||||||||||||||||||||||||    
T  30463903 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 29341014 - 29341113
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||| | ||||||||||| ||||||||| ||||||| ||||||||||| ||||| | ||||||||||| | |||||||||||||||||| |||    
T  29341014 ggacccacttaatagtaggacccactatctattttctgtgtctatctctctccaaattgcata-ctccatttattataccaaatggagaggatctttacc 29341112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 459
Target Start/End: Complemental strand, 24541333 - 24541230
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||| ||||||||| |   ||| || || ||||||||||||||||| |||||||| | |||||||||||||||||||  |||||||    
T  24541333 taatacctcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccat 24541234  T
Q  456 caaa 459  Q
    ||||    
T  24541233 caaa 24541230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 440
Target Start/End: Original strand, 41493844 - 41493931
Alignment:
Q  353 gagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaat 440  Q
    |||||||||||||| ||||||||||||||||||   |||||| ||||||||||   |||||||||||||||||||||||||| |||||    
T  41493844 gagtaatacctcaacttcgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgtgaaatatctatttagtccatgaat 41493931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 8541357 - 8541271
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||| ||||||||| |   ||| || |||||||||||||||||||| |||||||||||||||||| |||||||    
T  8541357 taatacctcaaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaattt 8541271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 8441027 - 8440943
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatg 92  Q
    |||| |||||||||||| | | |||||||||||||| |||||| |||  |||||||||||||| |||||||||||||||||||||    
T  8441027 ggacacacttagtggtatgtcgcaccatctatttttggtgtctatctacctccaacttgcaaaactccatttattttgccaaatg 8440943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 350 - 442
Target Start/End: Original strand, 32134228 - 32134320
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||| |||||||||||||| ||| |||||||||||   |||| | |||||||||  |||||||||| |||||||||||||||||||||||||    
T  32134228 attgactaatacctcaaatttgtcattgaattttcaaaaatcaaccaaattcgtctttgaattttgtaaaatatctatttagtccctgaattt 32134320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 43309129 - 43309225
Alignment:
Q  10 acccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcac 106  Q
    ||||| ||| ||||| || |||| ||||||||||| ||||| ||||||||||||||||||| |||||||||||||  |||||  |||||||||||||    
T  43309129 acccatttaatggtaagatccactatctattttttatgtctatctctctccaacttgcaaaactccatttattttatcaaataaagaggatcttcac 43309225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 7269532 - 7269446
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||| ||||||||| |   ||| ||||| ||||||||||||||||| |||||||| | |||||||||||||||    
T  7269532 taatacctcaaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 363 - 476
Target Start/End: Complemental strand, 18728716 - 18728603
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||||||| ||||||||||||  || || || ||||||||| |||| || |||||||| | |||||||||||||||  ||  |||||||||||| |    
T  18728716 tcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 18728617  T
Q  463 gtccttccgtccaa 476  Q
    |||| |||||||||    
T  18728616 gtccctccgtccaa 18728603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 363 - 444
Target Start/End: Complemental strand, 43492212 - 43492131
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaatttta 444  Q
    |||||||||| ||| ||||||||   |||||| || ||| ||||||||||||| ||||||||||||||||||||||||||||    
T  43492212 tcaaattcgtacttaaattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtccctgaatttta 43492131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 356 - 479
Target Start/End: Complemental strand, 2854447 - 2854325
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| |  || ||||||||||||||||  |||| ||| | |||||||||||||||||||  ||||||     
T  2854447 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaa-atcaaattagtccctgaattttacagacgtccaa 2854349  T
Q  456 caaaatggtccttccgtccaaaag 479  Q
    |||| | |||| ||||||||||||    
T  2854348 caaattcgtccctccgtccaaaag 2854325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 352 - 487
Target Start/End: Original strand, 40780549 - 40780684
Alignment:
Q  352 tgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgt 451  Q
    |||||||||||||||| | ||||||||||||| |   ||| |  || ||||||||||||||||  |||||||| | |||||||||||||||| ||  |||    
T  40780549 tgagtaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgt 40780648  T
Q  452 ccatcaaaatggtccttccgtccaaaagctccgtta 487  Q
    ||||||||   |||| |||||||||||  |||||||    
T  40780649 ccatcaaatcagtccctccgtccaaaatgtccgtta 40780684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 356 - 487
Target Start/End: Complemental strand, 42473728 - 42473597
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||| | ||||||||||||| |   ||| || || |||||||||||||| |  |||||||| |  ||||||||||||||||||  |||||||    
T  42473728 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattttacagacgtccat 42473629  T
Q  456 caaaatggtccttccgtccaaaagctccgtta 487  Q
    ||||   ||||||||||||||||  |||||||    
T  42473628 caaatcagtccttccgtccaaaatgtccgtta 42473597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 18653385 - 18653472
Alignment:
Q  13 cacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatc 101  Q
    |||||| |||||| || ||| ||||||||||||||||| ||||||| ||| ||||||| |||||||||||||| ||| | |||||||||    
T  18653385 cacttaatggtagaactcactatctattttttgtgtctatctctcttcaaattgcaaa-ctccatttattttgacaatttgagaggatc 18653472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 3057205 - 3057135
Alignment:
Q  13 cacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttatttt 84  Q
    |||||| |||||||| |||||||||||||||||||| | ||||| ||||| |||||||| ||||||||||||    
T  3057205 cacttaatggtaggatccaccatctattttttgtgtttatctctatccaaattgcaaat-tccatttatttt 3057135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 28813859 - 28813765
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactga--tcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||| |||||||||||||||||||||||||||  |   |  |  || |||||||||| ||||||||| ||||||||||||||||||||||||||    
T  28813859 attgactaatacctcaaattcgtccttgaatttaaaaaaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 28813765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 487
Target Start/End: Complemental strand, 29621902 - 29621771
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||| | ||| ||||||||| |   ||| || || ||||||||||||||||  |||||||| | |||||||||||||||| ||  |||||||    
T  29621902 taatacctcaaaatagtcattgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 29621803  T
Q  456 caaaatggtccttccgtccaaaagctccgtta 487  Q
    ||||   |||| |||||||||||  |||||||    
T  29621802 caaatcagtccctccgtccaaaatgtccgtta 29621771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 34328913 - 34328827
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||||||||||||||||||||||||||||   ||| |  |||||||||| |||||||||  ||||| |||||| |||| |||||||    
T  34328913 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccatgaattttgcaaaatagctattttgtccttgaattt 34328827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 36290625 - 36290682
Alignment:
Q  12 ccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    |||||||||| ||||||||||||  |||||||||||||| ||||||||||| ||||||    
T  36290625 ccacttagtgataggacccaccacttattttttgtgtctatctctctccaaattgcaa 36290682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 476
Target Start/End: Original strand, 38596878 - 38596991
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    ||||||||||||||||||||| |  | || || |||||||||||| |||| || |||||||| | |||||||||||||||   |  |||||||||||| |    
T  38596878 tcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtccatcaaaaag 38596977  T
Q  463 gtccttccgtccaa 476  Q
    ||| ||| ||||||    
T  38596978 gtctttctgtccaa 38596991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 3057440 - 3057534
Alignment:
Q  13 cacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    ||||| ||||||||| ||| ||||| |||||| ||||| ||||||||| | ||| ||| ||| ||||||||| | |||||||||||||||| ||||    
T  3057440 cactttgtggtaggatccatcatcttttttttttgtctatctctctccgaattgaaaa-ctctatttattttacaaaatggagaggatcttaaccc 3057534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 4592819 - 4592858
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtg 47  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  4592819 ggacccacttagtggtaagacccaccatctattttttgtg 4592858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 27428932 - 27428843
Alignment:
Q  13 cacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatctt 103  Q
    |||||| ||||||||  ||||||||||||||||||||| ||||| ||||| |||||  | || |||||||||   ||||||||||||||||    
T  27428932 cacttaatggtaggattcaccatctattttttgtgtctatctctttccaaattgcatct-tctatttatttttataaatggagaggatctt 27428843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 40782297 - 40782211
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||| | ||||||||||||| |   ||| || || ||||||||||||||||  |||||||| | |||||||||||||||    
T  40782297 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 40782211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 399 - 476
Target Start/End: Original strand, 32087560 - 32087637
Alignment:
Q  399 ttcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaa 476  Q
    ||||||||| |||| || |||||||| | ||||||||| |||||| ||  |||||||||||| ||||| |||||||||    
T  32087560 ttcgtcccttaattatgcgaaatatcaacttagtcccttaatttttcagacgtccatcaaaaaggtccctccgtccaa 32087637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 476
Target Start/End: Original strand, 35395343 - 35395456
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||| ||| |||||||||||   || || || ||||||||| |||| || |||||||| ||||||| |||||||||   |  |||||||||||| |    
T  35395343 tcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtccatcaaaaag 35395442  T
Q  463 gtccttccgtccaa 476  Q
    |||| |||||||||    
T  35395443 gtccctccgtccaa 35395456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 488
Target Start/End: Complemental strand, 38178207 - 38178082
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||||||||| ||||||||| | || |  |||||| ||||| |||| || |||||||| |||||||  ||||||||  ||  |||||||||||| |    
T  38178207 tcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgtccatcaaaaag 38178108  T
Q  463 gtccttccgtccaaaagctccgttag 488  Q
    |||| | ||||||   ||||||||||    
T  38178107 gtcccttcgtccatgtgctccgttag 38178082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 488
Target Start/End: Complemental strand, 38205431 - 38205306
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||||||||| ||||||||| | || |  |||||| ||||| |||| || |||||||| |||||||  ||||||||  ||  |||||||||||| |    
T  38205431 tcaaattcgtccttaaattttcacgggtcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgtccatcaaaaag 38205332  T
Q  463 gtccttccgtccaaaagctccgttag 488  Q
    |||| | ||||||   ||||||||||    
T  38205331 gtcccttcgtccatgtgctccgttag 38205306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 476
Target Start/End: Complemental strand, 43318174 - 43318061
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    ||||||||||||||||||||| |  | || || ||| || ||||| |||| || |||||||| | |||||||||||||||  ||  ||||||| |||| |    
T  43318174 tcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaag 43318075  T
Q  463 gtccttccgtccaa 476  Q
    |||| |||||||||    
T  43318074 gtccctccgtccaa 43318061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 31546509 - 31546604
Alignment:
Q  12 ccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    ||||||| | ||||| ||||||||||||||| | |||||  |||||| ||| ||||| | ||||||||||| |||||||||| || |||||| ||||    
T  31546509 ccacttaatagtagggcccaccatctattttatatgtctacctctcttcaaattgcata-ctccatttattatgccaaatggggatgatctttaccc 31546604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 482
Target Start/End: Complemental strand, 15459303 - 15459184
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||||||||||||||| ||  |||| |  ||| |||||||  |||||   |||||  |||||| || ||||||||| |||  ||||||||||||||    
T  15459303 tcaaattcgtccttgaatttgcaaggatcggacaaaatcgtcccccaatttatcgaaatggctattttgttcctgaatttaacagacgtccatcaaaatg 15459204  T
Q  463 gtccttccgtccaaaagctc 482  Q
    |||| | |||||||| ||||    
T  15459203 gtcccttcgtccaaatgctc 15459184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 32793393 - 32793487
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatctt 103  Q
    ||||| ||||||| ||| ||  || |||||||||||||||| | |||||||| || ||| ||| ||||||||||||||| |||| || ||||||||    
T  32793393 ggacctacttagtagtaagaatcatcatctattttttgtgtatatctctctctaaattgtaaa-ctccatttattttgctaaatagataggatctt 32793487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 32835886 - 32835965
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| ||||||| ||||||||||| | || |  |||||||||||| |||| || |||||||| ||||| |||||||||||    
T  32835886 tcaacttcgtccctgaattttcacgggtcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 32835965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 35650352 - 35650430
Alignment:
Q  23 taggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatct 102  Q
    |||||||||||| ||||||||||||||| ||| | | | | |||| ||||||||||||||||   |||||||||||||||    
T  35650352 taggacccaccacctattttttgtgtctatcttttttctaattgc-aatctccatttattttaataaatggagaggatct 35650430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 40330596 - 40330517
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| ||||||| ||||||||||| | || || ||| |||||||| |||| || |||||||| ||||| |||||||||||    
T  40330596 tcaacttcgtccctgaattttcacgggtcggccaaaatcgtccctcaattatgcgaaatatcaatttaatccctgaattt 40330517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 29620141 - 29620227
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||| | ||||||||||||| |   ||| || || ||||||||||||||||  |||||||| | |||||| ||||||||    
T  29620141 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaattt 29620227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 9460655 - 9460599
Alignment:
Q  44 tgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatc 101  Q
    ||||||| ||||||||||| ||||| | ||| ||||||||| ||||||||||||||||    
T  9460655 tgtgtctatctctctccaaattgcata-ctctatttattttaccaaatggagaggatc 9460599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 10362069 - 10361969
Alignment:
Q  9 gacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||||||||| |||||||| |||| | | ||||| ||| ||| ||||||||| | |||||  | |||||||| |||   |||||||||||||||||||||    
T  10362069 gacccacttaatggtaggatccactaccaattttatgtctctatctctctcctaattgcatct-tccatttagttttataaatggagaggatcttcaccc 10361971  T
Q  109 ag 110  Q
    ||    
T  10361970 ag 10361969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 477
Target Start/End: Original strand, 24496786 - 24496867
Alignment:
Q  396 aaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaa 477  Q
    ||||| |||||| |||| ||||||||||| | ||| |||||||||||   |  ||| |||||||||||||| ||||||||||    
T  24496786 aaatttgtccctcaattatgtgaaatatcaaattaatccctgaatttgtgagacgttcatcaaaatggtccatccgtccaaa 24496867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 478
Target Start/End: Original strand, 27349212 - 27349281
Alignment:
Q  409 aattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaa 478  Q
    ||||||| |||||||| |||| |||| |||||||  | | |||| ||||||||||||| |||||||||||    
T  27349212 aattttgcgaaatatcgattttgtccttgaatttctctcacgtctatcaaaatggtccctccgtccaaaa 27349281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 442
Target Start/End: Original strand, 35291064 - 35291137
Alignment:
Q  369 tcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||| ||||||||||| | || || |||||| ||||| || | ||||||||||| ||||| |||||||||||    
T  35291064 tcgtccctgaattttcacggttcggccaaattcatccctcaactatgtgaaatatcaatttaatccctgaattt 35291137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 41660125 - 41660186
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    |||||||| ||||| |  |||||||||  |||||||||||||| ||||||||||| ||||||    
T  41660125 ggacccacctagtgatgagacccaccacttattttttgtgtctatctctctccaaattgcaa 41660186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 31653059 - 31653154
Alignment:
Q  13 cacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccca 109  Q
    |||||| | ||||||| | | ||||||||| ||||| | ||||||||||| ||||| | | ||||||||| | ||||||||| |||||||| |||||    
T  31653059 cacttaatagtaggactcgctatctattttatgtgtttatctctctccaaattgcata-cgccatttattataccaaatggataggatctttaccca 31653154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 294; Significance: 1e-165; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 109 - 488
Target Start/End: Original strand, 15104200 - 15104576
Alignment:
Q  109 agtttcaccttatgaataagtggagaatcctaaatttgagcctcaacatcgtgcatattgtaatgtcacttccaatatatgccaaaactttgttaatagt 208  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15104200 agtttcaccttacgaataagtggagaatcctaaatttgagcctcaacatcgtgcatattgtaatgtcacttccaatatatgccaaaactttgttgatagt 15104299  T
Q  209 tgtttaaaacatggattgacgattgggagaacgataaggatttgtataaaactagaactgaggctattaaatttacgattaaccttatgacaatgggact 308  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||||||||    
T  15104300 tgtttaaaacatggattgatgattgggagaacgataaggatttgtataaaactagaaccgaggctatcaaatttacgattaaactcatgacaatgggact 15104399  T
Q  309 ttgagtccatatacacaaaggactctagaaacatcatatacattgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctg 408  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||   || ||||||| |||||||| ||||    
T  15104400 ttgagtccatatatacaaaggactctagaaacatcatatacatcgagtaatatctcaaatttgtccttgaatt---accgatcagccaaattcgttcctg 15104496  T
Q  409 aattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  15104497 aattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaaagctccattag 15104576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 50294120 - 50294019
Alignment:
Q  7 aggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcac 106  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  50294120 aggatccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatgaagaggatcttcac 50294021  T
Q  107 cc 108  Q
    ||    
T  50294020 cc 50294019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 50484405 - 50484511
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50484405 ggacccacttagtggttgtacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacc 50484504  T
Q  108 cagtttc 114  Q
    | |||||    
T  50484505 ctgtttc 50484511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 12151786 - 12151886
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||    
T  12151786 ggacccacttagtggtaggacccacaatctattttttgtgtctttctctctccaactggcaaaactccatttattttgccaaatggagaagatcttcacc 12151885  T
Q  108 c 108  Q
    |    
T  12151886 c 12151886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 48327210 - 48327110
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  48327210 ggacccacttagtggtaggactcaccatctattttttttgtctatctctctccaacttgcaaatctccatttattttgccaaatggagatgatcttcacc 48327111  T
Q  108 c 108  Q
    |    
T  48327110 c 48327110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 350 - 488
Target Start/End: Complemental strand, 25278495 - 25278357
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactc 449  Q
    ||||| |||||||||||||||||||||||||||| |   ||| |  |||||||||||||||||||| |||||| ||||||||||| |||||||||||  |    
T  25278495 attgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatac 25278396  T
Q  450 gtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  25278395 gtccatcaaaatggtccctccgtccaaaagctccgttag 25278357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 350 - 488
Target Start/End: Complemental strand, 31238622 - 31238484
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactc 449  Q
    ||||| |||||||||||||| ||||||||||||| |   ||| || ||||| |||||||||||||| ||||||||||||||||||||||||||||||  |    
T  31238622 attgactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagac 31238523  T
Q  450 gtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  31238522 gtccatcaaaatggtccatctgtccaaaagctccgttag 31238484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 350 - 487
Target Start/End: Complemental strand, 4856093 - 4855956
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactc 449  Q
    ||||| |||||||||||||||||||||||||||| |   ||| || |||| ||||||||||||||| |||||||| | |||||||||||||||||||  |    
T  4856093 attgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagac 4855994  T
Q  450 gtccatcaaaatggtccttccgtccaaaagctccgtta 487  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  4855993 gtccatcaaaatggtccctccgtccaaaagctccgtta 4855956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 2869582 - 2869714
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||||||||||||||||||||||||||||   ||| |  |||||||||||||||||||| ||||||||||||||||| || |||||||||  |||||||    
T  2869582 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgtccat 2869681  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| ||||||||||||||| |||||    
T  2869682 caaaatggtccctccgtccaaaagctctgttag 2869714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 351 - 488
Target Start/End: Original strand, 27087281 - 27087418
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcg 450  Q
    |||| ||||||||||||||||||||| |||||| |   ||| |  ||||| |||||||||||||| ||||||||||||||||||||||||||||||  ||    
T  27087281 ttgactaatacctcaaattcgtccttaaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacg 27087380  T
Q  451 tccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||||| || |||||||||||||||||||||    
T  27087381 tccatcaaaatggcccatccgtccaaaagctccgttag 27087418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 6818799 - 6818667
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| || ||| ||||||||| |||| |  |||||||||||||||||||||||||||||  |||||||    
T  6818799 taatacctcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagacgtccat 6818700  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||||||||||||    
T  6818699 caaaatggtccctccgtccaaaagctccgttag 6818667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 34778259 - 34778127
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| || |||| ||||||||||||||| |||||||| | |||||||||||||||||||   ||||||    
T  34778259 taatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgtccat 34778160  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||||||||||||    
T  34778159 caaaatggtccctccgtccaaaagctccgttag 34778127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 37344345 - 37344477
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| |  |||||||||||||||||||| |||||| ||||||||||  |||||||||||  |||||||    
T  37344345 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatacgtccat 37344444  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||||||||||||    
T  37344445 caaaatggtccctccgtccaaaagctccgttag 37344477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 50556218 - 50556086
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||| |||||||||||| ||||||||| |   |||||  ||||||||| |||||||||| |||||||||||||||||||| |||||||||  |||| ||    
T  50556218 taatatctcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccctaaattttacagacgtctat 50556119  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||||||||||||    
T  50556118 caaaatggtccctccgtccaaaagctccgttag 50556086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 3013597 - 3013459
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtc--- 452  Q
    |||||||||||||||||||||||||||| |   |||||  |||||||||| ||||||||| ||||||||||||||||||||||||||||||  ||||       
T  3013597 taatacctcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 3013498  T
Q  453 ---catcaaaatggtccttccgtccaaaagctccgttag 488  Q
       ||||||||| |||| |||||||||||||||||||||    
T  3013497 ggacatcaaaatagtccctccgtccaaaagctccgttag 3013459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 12380907 - 12380833
Alignment:
Q  34 atctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12380907 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 12380833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 12384974 - 12384900
Alignment:
Q  34 atctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12384974 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 12384900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 358 - 488
Target Start/End: Complemental strand, 51896271 - 51896141
Alignment:
Q  358 atacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatca 457  Q
    ||||||||||| ||||||| |||||| |   |||||  ||||| |||||||||||||| ||||||||||||||||||||||||||||||   ||||||||    
T  51896271 atacctcaaatccgtccttaaattttaaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagatgtccatca 51896172  T
Q  458 aaatggtccttccgtccaaaagctccgttag 488  Q
    |||| |||| ||||||||||||||| |||||    
T  51896171 aaatagtccctccgtccaaaagctctgttag 51896141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 33602765 - 33602633
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| |  || |||||||||||||||||||||||||| | |||||||||||||||||||  ||||| |    
T  33602765 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattttacagacgtccgt 33602666  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    |||| | |||| |||||||||||| ||||||||    
T  33602665 caaattagtccctccgtccaaaaggtccgttag 33602633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 356 - 455
Target Start/End: Complemental strand, 25279074 - 25278975
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||||||||||||||||||||||||||||   |||||| |||||||| ||| ||||||| ||||||||||||||||||||||||||||||  |||||||    
T  25279074 taatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttacagacgtccat 25278975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 7840735 - 7840634
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||||| |||| |||||||||||| ||||||||| |||||||| |||||||||||||| |||| ||||||||||| ||||||||| | ||||||||||||    
T  7840735 ggacccgcttaatggtaggacccatcatctatttcttgtgtctatctctctccaacttacaaaactccatttattctgccaaatgaataggatcttcacc 7840636  T
Q  108 ca 109  Q
    ||    
T  7840635 ca 7840634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 40328299 - 40328390
Alignment:
Q  10 acccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttc 104  Q
    |||||||||||||| ||||||||||||||||||| |||||| ||||||  ||| ||||||| |||||||||||||||||||||||||||||||||    
T  40328299 acccacttagtggtgggacccaccatctattttt-gtgtctatctctc--caatttgcaaaactccatttattttgccaaatggagaggatcttc 40328390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 45978041 - 45978124
Alignment:
Q  25 ggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||  ||||| ||||||||||||||||    
T  45978041 ggacccaccatctattttttgtatctatctctctccaacttgcaaaactccatttattttatcaaatagagaggatcttcaccc 45978124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 356 - 487
Target Start/End: Complemental strand, 46583677 - 46583546
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| |  || || |||||||||||||| |||||||| | |||||||||||||||||||  |||||||    
T  46583677 taatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccat 46583578  T
Q  456 caaaatggtccttccgtccaaaagctccgtta 487  Q
    |||| | |||| |||||||||||| |||||||    
T  46583577 caaatttgtccctccgtccaaaaggtccgtta 46583546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 23862007 - 23861907
Alignment:
Q  12 ccacttagtggtaggac---ccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    ||||||||||||||||    |||||||||||||||||||||| ||||||||||||||||||| || |||||||||||| |||| |||||||| |||||||    
T  23862007 ccacttagtggtaggattcaccaccatctattttttgtgtctatctctctccaacttgcaaaacttcatttattttgctaaatagagaggatattcaccc 23861908  T
Q  109 a 109  Q
    |    
T  23861907 a 23861907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 356 - 444
Target Start/End: Complemental strand, 52643736 - 52643648
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaatttta 444  Q
    ||||||||||||||||||||| |||||| |   ||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  52643736 taatacctcaaattcgtccttaaatttttaaaaatcagttaaattcgtccctgaattttgcgaaatatttatttagtccctgaatttta 52643648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 52641891 - 52641969
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtcc 434  Q
    ||||||||||||||||||||||||||||||   |||||| |||||||||||||||||||| ||||||| ||||||||||    
T  52641891 taatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatatttagtcc 52641969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 18976361 - 18976260
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctatt-ttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcac 106  Q
    ||||| ||||| |||| ||| |||||||||||| |||||||||| ||||||||||| ||||||| ||| |||||||||  ||||||||||||||||| ||    
T  18976361 ggacctacttaatggttggatccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaatggagaggatcttaac 18976262  T
Q  107 cc 108  Q
    ||    
T  18976261 cc 18976260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 350 - 433
Target Start/End: Original strand, 25278851 - 25278934
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtc 433  Q
    ||||| ||||||||||||||| ||||||||||||||   |||||  ||||| |||||||||||||| |||||||||||||||||    
T  25278851 attgactaatacctcaaattcatccttgaattttcaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtc 25278934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 31236817 - 31236908
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| |||||||||||||||||||||||||||| |   ||| |  ||||| |||||||||||||| |||||||||||||||| |||||||||    
T  31236817 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagttcctgaattt 31236908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 32361363 - 32361264
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||| ||||||| |||||| ||||||||||| |||||||||  |||||||||||||| |||| ||| | ||||||  ||||||||||||||| ||||||    
T  32361363 ggacctacttagtagtaggatccaccatctatcttttgtgtccatctctctccaacttacaaaactctaattatttcaccaaatggagaggattttcacc 32361264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 3011858 - 3011944
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||||||||||||||||||| |||||| |   |||||  |||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  3011858 taatacctcaaattcgtccttaaattttaaaaaatcagtcaaattcgttcctgaattttgcgaaatatctatttagtctctgaattt 3011944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 50554166 - 50554252
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| |  ||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  50554166 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtaaaatagctatttagttcctgaattt 50554252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 363 - 476
Target Start/End: Complemental strand, 35480089 - 35479976
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||| ||||||||||||||||||| ||||||| |||||| ||||| |||| || |||||||| | ||| ||  |||||||  ||  |||||||||||| |    
T  35480089 tcaacttcgtccttgaattttcacggatcagccaaattcatccctcaattatgcgaaatatcaacttaatctatgaatttgtcagacgtccatcaaaaag 35479990  T
Q  463 gtccttccgtccaa 476  Q
    ||||||||||||||    
T  35479989 gtccttccgtccaa 35479976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 363 - 488
Target Start/End: Original strand, 42134492 - 42134617
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    ||||||||||||||||||||| || | || || ||| || ||||| |||| || |||||||| | |||||||||||||||  ||  |||||||||||| |    
T  42134492 tcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 42134591  T
Q  463 gtccttccgtccaaaagctccgttag 488  Q
    |||| |||||||||  ||||||||||    
T  42134592 gtccctccgtccaagtgctccgttag 42134617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 27089371 - 27089279
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||| |||||||||||||||||||||||||||| |   ||| || || ||||||| |||||||||||||||||| | ||| |||||||||||    
T  27089371 attgactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccttgaattttgtgaaatatcaaattaatccctgaattt 27089279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 24977261 - 24977343
Alignment:
Q  10 acccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatgg 93  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||| || ||| ||| |  |||||||||||| ||||||    
T  24977261 acccacttagtggtaggatccaccatctattttttgtgtctatctctctctaaattgtaaa-catcatttattttgctaaatgg 24977343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 26223585 - 26223676
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| |||||||||||||||||||||||||||| |   ||| |  || ||||||||||||||||| |||||||| | |||||||||||||||    
T  26223585 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 26223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 2871162 - 2871076
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||| |||||||||||||||||||||| |   ||| ||||||||||||||||||||||| |||||| |||||| |||  |||||||    
T  2871162 taatatctcaaattcgtccttgaatttttaaaaatcggctaaattcgtccctgaattttgcgaaatagctattttgtctttgaattt 2871076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 34776572 - 34776658
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||  |||||||| | |||||||||||||||    
T  34776572 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 46582013 - 46582099
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||| ||||||||||||| |   ||| || || ||||||||||||||||| |||||||| | |||||||||||||||    
T  46582013 taatacctcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46582099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 356 - 440
Target Start/End: Original strand, 8167945 - 8168029
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaat 440  Q
    |||||||||||||||||||||||||||| |   ||| || || |||||| |||||||||| |||||||| | |||||||||||||    
T  8167945 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaat 8168029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 39426229 - 39426317
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggaga 96  Q
    ||||||| ||||||||||||||||| ||||||||| ||||||| ||||||||||| |||   |  ||||||||||||  ||||||||||    
T  39426229 ggacccaattagtggtaggacccactatctattttatgtgtctatctctctccaaattgtgtacttccatttattttatcaaatggaga 39426317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 487
Target Start/End: Complemental strand, 9121789 - 9121658
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||| | ||||||||||||| |   ||| || || ||||||||| ||||||  |||||||| | |||||||||||||||| ||  |||||||    
T  9121789 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 9121690  T
Q  456 caaaatggtccttccgtccaaaagctccgtta 487  Q
    ||||   |||| |||||||||||  |||||||    
T  9121689 caaatcagtccctccgtccaaaatgtccgtta 9121658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 25276740 - 25276831
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| |||||||||||||||||||||||||||| |   ||| || || ||| ||| ||||||||| |||||||| | |||||||||||||||    
T  25276740 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaattt 25276831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 487
Target Start/End: Complemental strand, 47013203 - 47013072
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||| | ||||||||||||| |   ||| |  || ||||||||||||||||  |||||||| | |||||||||||||||| ||  |||||||    
T  47013203 taatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccat 47013104  T
Q  456 caaaatggtccttccgtccaaaagctccgtta 487  Q
    ||||   |||| |||||||||||  |||||||    
T  47013103 caaatcagtccctccgtccaaaatgtccgtta 47013072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 8169654 - 8169568
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||   ||||||| | |||||||||||||||    
T  8169654 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaattt 8169568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 488
Target Start/End: Original strand, 51121915 - 51122040
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||| ||||||||||||||| ||   |||||| ||  |||| ||  |||||||  ||||||| |||| ||||||||||||  | | ||||||||||||||    
T  51121915 tcaacttcgtccttgaatttgcaagcatcagccaacatcgttcccaaattttgcaaaatatcaatttcgtccctgaatttctctcacgtccatcaaaatg 51122014  T
Q  463 gtccttccgtccaaaagctccgttag 488  Q
    |||| |||||||||||| || |||||    
T  51122015 gtccctccgtccaaaaggtctgttag 51122040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 12380966 - 12380922
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtcttt 52  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||    
T  12380966 ggactcacttagtggtagaacccaccatctattttttgtgtcttt 12380922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 12385033 - 12384989
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtcttt 52  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||    
T  12385033 ggactcacttagtggtagaacccaccatctattttttgtgtcttt 12384989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 1228563 - 1228496
Alignment:
Q  41 ttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||   ||||| |||||||||| ||||    
T  1228563 ttttgtgtctgtctctctccaaattgcaaaactccatttattttagtaaatgaagaggatcttaaccc 1228496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 434
Target Start/End: Complemental strand, 37088222 - 37088144
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtcc 434  Q
    ||||||||||||||| |||||||||||| |   ||| || |||||||| ||||||||||| |||||| |||||| ||||    
T  37088222 taatacctcaaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattttgtcc 37088144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 30077700 - 30077639
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    |||| ||||||||| ||| ||||||||  |||||||||||||| ||||||||||| ||||||    
T  30077700 ggactcacttagtgatagaacccaccacttattttttgtgtctatctctctccaaattgcaa 30077639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 52280091 - 52280034
Alignment:
Q  12 ccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    |||||||||| ||||||||||||  |||||||| ||||| ||||||||||| ||||||    
T  52280091 ccacttagtgataggacccaccacttattttttatgtctatctctctccaaattgcaa 52280034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 30860794 - 30860726
Alignment:
Q  39 ttttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||||| ||||| | ||||||||||||||||| ||||||| ||||||| |||||  || ||||||||||    
T  30860794 ttttttatgtctatatctctccaacttgcaaaactccattcattttgctaaatgatgaagatcttcacc 30860726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 51894610 - 51894656
Alignment:
Q  396 aaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||| ||| |||||||||| ||||||| ||||||||||||||||||    
T  51894610 aaatttgtctctgaattttgcgaaatatatatttagtccctgaattt 51894656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 460
Target Start/End: Complemental strand, 18184057 - 18183960
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaa 460  Q
    ||||||||||| ||||||||| || | || || ||| || ||||| |||| || |||||||| | |||||||||||||||  ||  ||||||||||||    
T  18184057 tcaaattcgtctttgaatttttacggttcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 18183960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 488
Target Start/End: Complemental strand, 36895588 - 36895499
Alignment:
Q  399 ttcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||| | |||| || |||||||| | |||||||||||||||  ||  |||||||||||| ||||| | |||||||  ||||||||||    
T  36895588 ttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtcccttcgtccaagtgctccgttag 36895499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 488
Target Start/End: Original strand, 43868712 - 43868749
Alignment:
Q  451 tccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  43868712 tccatcaaaatagtccttccgtccaaatgctccgttag 43868749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 488
Target Start/End: Complemental strand, 46638921 - 46638796
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||||| | |||||||||||   || || || ||| ||||| |||| || |||||||| | ||||||| |||||||  ||  |||||| ||||| |    
T  46638921 tcaaattcgttcctgaattttcacgcgtcggccaacttcatccctcaattatgcgaaatatcaacttagtccttgaatttgtcagacgtccaccaaaaag 46638822  T
Q  463 gtccttccgtccaaaagctccgttag 488  Q
    |||| |||||||||  ||||||||||    
T  46638821 gtccctccgtccaagtgctccgttag 46638796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 6948884 - 6948825
Alignment:
Q  12 ccacttagtggtaggacccacca--tctattttttgtgtctttctctctccaacttgcaa 69  Q
    |||||||||| ||||||||||||  | |||||||| ||||| ||||||||||| ||||||    
T  6948884 ccacttagtgataggacccaccacttatattttttttgtctatctctctccaaattgcaa 6948825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 472
Target Start/End: Original strand, 27940651 - 27940727
Alignment:
Q  396 aaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgt 472  Q
    |||||||||||| |||| || |||||||| ||||| ||| |||||||  ||  |||||||||||| ||||| |||||    
T  27940651 aaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttatcagacgtccatcaaaaaggtccctccgt 27940727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 383
Target Start/End: Original strand, 45044947 - 45044979
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaatttt 383  Q
    |||| ||||||||||||||||||||||||||||    
T  45044947 ttgactaatacctcaaattcgtccttgaatttt 45044979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 7e-50; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 28069738 - 28069838
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28069738 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 28069837  T
Q  108 c 108  Q
    |    
T  28069838 c 28069838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 13282481 - 13282613
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  13282481 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 13282580  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||||||||||||    
T  13282581 caaaatggtccctccgtccaaaagctccgttag 13282613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 351 - 488
Target Start/End: Complemental strand, 8609933 - 8609796
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcg 450  Q
    |||| ||||||||||||||||| |||||||||| |   ||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||    
T  8609933 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 8609834  T
Q  451 tccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||||||||||| |||||||||||||||||||||    
T  8609833 tccatcaaaatggtccctccgtccaaaagctccgttag 8609796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 350 - 488
Target Start/End: Complemental strand, 26242461 - 26242323
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactc 449  Q
    ||||| ||||||||||| ||||| ||||||||||||   |||||| |||||||||||| ||||||| ||||||||||||||||| ||||||||||||  |    
T  26242461 attgattaatacctcaatttcgttcttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagac 26242362  T
Q  450 gtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  26242361 gtccatcaaaatggtccctccgtccaaaagctccgttag 26242323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 350 - 488
Target Start/End: Complemental strand, 41825791 - 41825653
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactc 449  Q
    ||||| ||||||||||||||||||||||||||||||   ||||  ||||||||||| ||||||||| ||||||||||||||||||||||||||||||  |    
T  41825791 attgattaatacctcaaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagac 41825692  T
Q  450 gtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||||||||  ||||||||||||||| |||||    
T  41825691 gtccatcaaaatggtcactccgtccaaaagctctgttag 41825653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 30426725 - 30426624
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||    
T  30426725 ggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatggagagggtcttcacc 30426626  T
Q  108 ca 109  Q
    ||    
T  30426625 ca 30426624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 349 - 488
Target Start/End: Complemental strand, 9673313 - 9673174
Alignment:
Q  349 cattgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacact 448  Q
    ||||||||||||| |  ||||||||||||||| ||||   || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||      
T  9673313 cattgagtaatacttataattcgtccttgaatcttcatcaattagctaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacaga 9673214  T
Q  449 cgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||||||||||||| |||||| ||||||| ||||||    
T  9673213 cgtccatcaaaatggtccctccgtctaaaagcttcgttag 9673174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 36991375 - 36991475
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||||||||||||||||||||||| ||||||||| || ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36991375 ggacccacttagtggtaggacccatcatctatttcttatgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacc 36991474  T
Q  108 c 108  Q
    |    
T  36991475 c 36991475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 41042725 - 41042593
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||| |||| |||||||||||||| |   ||  || ||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  41042725 taataccttaaatccgtccttgaattttaaaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtccat 41042626  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||||||||||||    
T  41042625 caaaatggtccctccgtccaaaagctccgttag 41042593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 42941777 - 42941909
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   |||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||   ||||||    
T  42941777 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtccat 42941876  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||| |||| ||||||||||| |||||||||    
T  42941877 caaaatagtccctccgtccaaaatctccgttag 42941909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 13108477 - 13108345
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||| |||||||||||||||||||||| |   ||| ||||||| ||||||||||||||| |||||||| | |||||||||||||||||||  |||||||    
T  13108477 taataactcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccat 13108378  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||||| ||||||    
T  13108377 caaaatggtccctccgtccaaaagcttcgttag 13108345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 7745253 - 7745121
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||| |||||||||||| |||||||||||   |||||| ||||||||| |||||||||| ||||||| ||||||||||||| ||||||||  | |||||    
T  7745253 taatatctcaaattcgtctttgaattttcaaaaatcagccaaattcgtctctgaattttgcgaaatatttatttagtccctgtattttacagacatccat 7745154  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| ||| |||||||||||||||||    
T  7745153 caaaatggtccctccatccaaaagctccgttag 7745121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 10672568 - 10672469
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||| ||||||||||||||| |||||||||||||||||||||| ||||||  ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  10672568 ggactcacttagtggtaggatccaccatctattttttgtgtctatctctc--caacttgcaaaactccatttattttgccaaatggagagaatcttcacc 10672471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 38547231 - 38547363
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||||||||| |||||||||||||||| |   ||| || |||| ||||| ||||||||| |||||||| | |||||||||||||||||||  |||||||    
T  38547231 taatacctcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacgtccat 38547330  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| ||| |||||||||||||||||    
T  38547331 caaaatggtccctccatccaaaagctccgttag 38547363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 22272337 - 22272471
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactga--tcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtcc 453  Q
    |||||||||||||||||| ||||||||| |   |  ||||  |||||||||||||||||||| | ||||||||||||||||||||||||||||  |||||    
T  22272337 taatacctcaaattcgtctttgaattttaaaaaaaatcagtcaaattcgtccctgaattttgcgtaatatctatttagtccctgaattttacaaacgtcc 22272436  T
Q  454 atcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||| |||| ||| |||||||||||||||||    
T  22272437 atcaaaatagtccctccatccaaaagctccgttag 22272471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 40695298 - 40695204
Alignment:
Q  13 cacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||    
T  40695298 cacttagtggtaggacctaccatctattttttgtgtctatctctctccaacttccaaa-ctccatttattttgctaaatggagaagatcttcaccc 40695204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 356 - 477
Target Start/End: Original strand, 5036448 - 5036569
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||||||||||||||||||| |||||| |   ||| |  ||||||||||||||||||||||||||||||||||||||| |||||||||||  |||| ||    
T  5036448 taatacctcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtctat 5036547  T
Q  456 caaaatggtccttccgtccaaa 477  Q
    ||||||||||  ||||||||||    
T  5036548 caaaatggtctctccgtccaaa 5036569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 10652673 - 10652573
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||| ||||| ||| ||||||||||| ||||||||| ||| ||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||    
T  10652673 ggacccaattagtagtatgacccaccatcaattttttgtatctatctctctccaacttgcaaaacaccatttattttaccaaatggagaggatcttcacc 10652574  T
Q  108 c 108  Q
    |    
T  10652573 c 10652573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 350 - 488
Target Start/End: Complemental strand, 13486246 - 13486108
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactc 449  Q
    ||||| |||||||||||||| || |||||||||| |   ||| |  | ||||||| ||| |||||| ||||||||||||||||||||||||||||||  |    
T  13486246 attgactaatacctcaaatttgtgcttgaatttttaaaaatcggtcagattcgtctctggattttgcgaaatatctatttagtccctgaattttacagac 13486147  T
Q  450 gtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||||||||| || ||||||||||||| ||||    
T  13486146 gtccatcaaaatggtccctctgtccaaaagctccattag 13486108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 356 - 485
Target Start/End: Original strand, 27691157 - 27691286
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||| |||||||| | |||||||||||||||||||  |||||||    
T  27691157 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccat 27691256  T
Q  456 caaaatggtccttccgtccaaaagctccgt 485  Q
    ||||   |||| |||||||||||| |||||    
T  27691257 caaatccgtccctccgtccaaaaggtccgt 27691286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 26238729 - 26238807
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtcc 434  Q
    ||||||||||||||||||||||||||||||   |||||| |||||||||||||||||||| ||||||||||||||||||    
T  26238729 taatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtcc 26238807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 42943512 - 42943426
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| || |||||||||||||||||||| ||||||||||||||||||||||||||    
T  42943512 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 42943426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 44859223 - 44859128
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttca 105  Q
    |||||||||||||||||| ||||||||||||||||| ||  || |||||||| |||||||||| |||||||||||||| ||||| |||||||||||||    
T  44859223 ggacccacttagtggtagaacccaccatctatttttagt--ctatctctctctaacttgcaaaactccatttattttgtcaaatagagaggatcttca 44859128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 37966491 - 37966400
Alignment:
Q  16 ttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||||||||||||| || ||||||||||||||| | ||||||| ||| |||||||| ||||||||||||||||||||||||||||||| ||||    
T  37966491 ttagtggtaggacctacaatctattttttgtgtttatctctcttcaaattgcaaat-tccatttattttgccaaatggagaggatcttaaccc 37966400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 356 - 434
Target Start/End: Complemental strand, 34681152 - 34681074
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtcc 434  Q
    ||||||||||||||||||||||||||||||   ||| || |||||||||||||||||||| ||||||||||||||||||    
T  34681152 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtcc 34681074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 353 - 442
Target Start/End: Original strand, 9671977 - 9672066
Alignment:
Q  353 gagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||||||||| ||||||||||||||||||||||  ||||   |||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  9671977 gagtaataccttaaattcgtccttgaattttcaccaatcaatcaaattcgtccatgaattttgcgaaatatctatttagtccccgaattt 9672066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 351 - 434
Target Start/End: Complemental strand, 43262228 - 43262145
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtcc 434  Q
    |||| ||||||||||||||||||||| ||||||||   |||||||||||||| |||| ||||||| ||||||||||||||||||    
T  43262228 ttgactaatacctcaaattcgtccttaaattttcaaaaatcagctaaattcgaccctaaattttgcgaaatatctatttagtcc 43262145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 406 - 488
Target Start/End: Complemental strand, 40339771 - 40339689
Alignment:
Q  406 ctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||| ||||||||||||||||||||| |||||||||||   ||||||||||||||||| | | |||||||||||||||||    
T  40339771 ctgaattatgtgaaatatctatttagtccatgaattttacagatgtccatcaaaatggtcccttcatccaaaagctccgttag 40339689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 41823893 - 41823971
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtcc 434  Q
    |||||||| |||||||||||||||||||||   ||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  41823893 taataccttaaattcgtccttgaattttcaaaaatcagctaatttcgtccttgaattttgcgaaatatctatttagtcc 41823971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 108
Target Start/End: Original strand, 5033310 - 5033371
Alignment:
Q  47 gtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  5033310 gtctatctctctccaacttgcaaaactccatttattttgccaaatggaaaggatcttcaccc 5033371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 45113289 - 45113390
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctatt-ttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcac 106  Q
    |||| ||||||||||| |||||||||||||||| |||||||||| | ||||||||| ||||||| | | |||||||||  ||||||||||||||||| ||    
T  45113289 ggacacacttagtggttggacccaccatctattcttttgtgtctatgtctctccaaattgcaaaacacaatttattttagcaaatggagaggatcttaac 45113388  T
Q  107 cc 108  Q
    ||    
T  45113389 cc 45113390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 41511285 - 41511373
Alignment:
Q  12 ccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggat 100  Q
    |||||||||| |||||||||| ||||||||||| | ||| ||||| ||||||||||||| ||||||||||||||  ||| |||||||||    
T  41511285 ccacttagtgataggacccactatctattttttatatctatctctttccaacttgcaaaactccatttattttgttaaacggagaggat 41511373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 33761072 - 33761158
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||| ||||||||| |   |||||| || ||||||||||||||||| |||||||| | |||||||||||||||    
T  33761072 taatacctcaaattcgtctttgaattttgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 33761158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 103
Target Start/End: Original strand, 6014212 - 6014309
Alignment:
Q  7 aggacccacttagtggtaggacccaccatctatt-ttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatctt 103  Q
    |||| ||||||| |||||||||| | |||||||| |||||||||| ||| ||||||| ||||||| ||| |||||||||  |||||||||||||||||    
T  6014212 aggatccacttaatggtaggacctatcatctattcttttgtgtctatctttctccaaattgcaaaactctatttattttagcaaatggagaggatctt 6014309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 363 - 476
Target Start/End: Complemental strand, 42897888 - 42897775
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||| |||||||||||||| || | || || |||||||||||| |||| ||||||||||| | ||||||| |||||||  ||  |||||||||||| |    
T  42897888 tcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaag 42897789  T
Q  463 gtccttccgtccaa 476  Q
    |||| |||||||||    
T  42897788 gtccctccgtccaa 42897775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 399 - 487
Target Start/End: Complemental strand, 33708902 - 33708814
Alignment:
Q  399 ttcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgtta 487  Q
    ||||||||||||||||| |||||||  | |||||||||||||||||||  |||||||||||   |||| |||||||||||| |||||||    
T  33708902 ttcgtccctgaattttgcgaaatattaaattagtccctgaattttacaaacgtccatcaaatctgtccctccgtccaaaaggtccgtta 33708814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 601790 - 601704
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||  |||||||| | |||||||||||||||    
T  601790 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 601704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 22273977 - 22273891
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||| ||||||||||||| |   ||| || ||||| ||| ||||||||||  |||||||||||||||||||||||||    
T  22273977 taatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaattt 22273891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 27692923 - 27692837
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| || || |||||||||||||||||  ||||||| | |||||||||||||||    
T  27692923 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaattt 27692837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 33762799 - 33762713
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||  |||||||| | |||||||||||||||    
T  33762799 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33762713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 35510905 - 35510819
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| |  || ||||||| |||||||||||||||||| | |||||||||||||||    
T  35510905 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaattt 35510819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 38548917 - 38548831
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||| |||||||| | ||| |||||||||||    
T  38548917 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 38548831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 28318958 - 28318854
Alignment:
Q  8 ggacccacttagtggtaggacccaccatct------attttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatc 101  Q
    ||||||||||||||||||||||||| ||||      ||||||| ||| | |||||||| |||||||||| ||||||||||||| ||||||  ||| ||||    
T  28318958 ggacccacttagtggtaggacccactatctttttttattttttttgtatatctctctcaaacttgcaaaactccatttattttaccaaataaagaagatc 28318859  T
Q  102 ttcac 106  Q
    |||||    
T  28318858 ttcac 28318854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 442
Target Start/End: Original strand, 35509211 - 35509303
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||| |||||||||||||| ||||||||||||| |   ||| |  || ||||||||||||||||| |||||||| | |||||||||||||||    
T  35509211 attgactaatacctcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35509303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 13106802 - 13106893
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| |||||||| ||||||||||||||||||| |   ||| || || ||| ||||||||||||| |||||||| | |||||||||||||||    
T  13106802 ttgactaataccttaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 13106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 33160262 - 33160183
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||| | || || |||||| ||||| |||| ||||||||||| | |||||| ||||||||    
T  33160262 tcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaattt 33160183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 5033108 - 5033150
Alignment:
Q  13 cacttagtggtaggacccaccatctattttttgtgtctttctc 55  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  5033108 cacttagtggtaggacccaccatctattttttgtgtctatctc 5033150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 29239273 - 29239187
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||| ||||||  |||||||| | |||||||||||||||    
T  29239273 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 476
Target Start/End: Original strand, 1320627 - 1320740
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    ||||||| |||||| ||||||||| | || ||||||||| ||||| |||| ||  ||||||| | |||||||||||||||  ||  ||||||| || | |    
T  1320627 tcaaatttgtccttaaattttcacgggtcggctaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcagacgtccataaataag 1320726  T
Q  463 gtccttccgtccaa 476  Q
    ||||||||||||||    
T  1320727 gtccttccgtccaa 1320740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 487
Target Start/End: Original strand, 15305846 - 15305931
Alignment:
Q  402 gtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgtta 487  Q
    ||||||||||| | ||||||||| | |||||||||||||||||||  |||||||||||   |||| |||||||||||  |||||||    
T  15305846 gtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtccaaaatatccgtta 15305931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 487
Target Start/End: Original strand, 15486215 - 15486300
Alignment:
Q  402 gtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgtta 487  Q
    ||||||||||| | ||||||||| | |||||||||||||||||||  |||||||||||   |||| |||||||||||  |||||||    
T  15486215 gtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtccaaaatatccgtta 15486300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 24102040 - 24102097
Alignment:
Q  13 cacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaa 70  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||||  ||||||||||    
T  24102040 cacttagtggtaggatccaccatctattttttatgtctatctctcttaaacttgcaaa 24102097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 26749604 - 26749543
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    |||||||||||||| ||||||||| ||  |||||||||||||| ||||||||||| ||||||    
T  26749604 ggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaaattgcaa 26749543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 476
Target Start/End: Original strand, 32822371 - 32822484
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||| |||||||||||||||| |  |||| || |||||| ||||| |||| | | ||||||| | |||||||||||||||  ||   ||||||||||| |    
T  32822371 tcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgtcagatgtccatcaaaaag 32822470  T
Q  463 gtccttccgtccaa 476  Q
    ||||||||||||||    
T  32822471 gtccttccgtccaa 32822484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 13284087 - 13283995
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||| ||||||| |||||||||||||||||||| |   ||| || || || |||||||||||||| |||||||| | ||||||| |||||||    
T  13284087 attgattaataccacaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaattt 13283995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 461186 - 461265
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| ||||||||||||||||||| | || || |||||| ||||| |||| ||||||||| | ||||| |||||||||||    
T  461186 tcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgtgaaataacaatttaatccctgaattt 461265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 5038152 - 5038062
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| |||||||||||||||||| ||||||||| |   ||| |  |||||||| | ||||||||| |||||| |||||||||||||||||||    
T  5038152 ttgactaatacctcaaattcgtc-ttgaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaattt 5038062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 470
Target Start/End: Original strand, 5075378 - 5075485
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||| ||||||||||||||| ||   |||||| ||| |||||||  ||||||| |||||||| |||| |||| |||||||  | | ||||||||||||||    
T  5075378 tcaacttcgtccttgaatttgcaagcatcagccaaaatcgtccccaaattttgcgaaatatcaattttgtccttgaatttctctcacgtccatcaaaatg 5075477  T
Q  463 gtccttcc 470  Q
    || |||||    
T  5075478 gttcttcc 5075485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 12177625 - 12177575
Alignment:
Q  20 tggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaa 70  Q
    |||| ||| |||||||||||||||||| ||| |||||||||||||||||||    
T  12177625 tggtgggatccaccatctattttttgtatctatctctctccaacttgcaaa 12177575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 12422053 - 12422003
Alignment:
Q  20 tggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaa 70  Q
    |||| ||| |||||||||||||||||| ||| |||||||||||||||||||    
T  12422053 tggtgggatccaccatctattttttgtatctatctctctccaacttgcaaa 12422003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 13484548 - 13484634
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| ||||||||||||| |||||||||||   ||| || |||||||||||||||||||| |||||   ||||| |||| |||||||    
T  13484548 taatgcctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaattgttattttgtccttgaattt 13484634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 18689512 - 18689597
Alignment:
Q  10 acccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggaga 96  Q
    ||||||||| |||||||| |||| ||||||||| | ||| | ||||||||||| ||||| || |||||||||||||| |||| ||||    
T  18689512 acccacttaatggtaggatccactatctattttatatgtttatctctctccaaattgcatat-tccatttattttgctaaatcgaga 18689597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 34612584 - 34612634
Alignment:
Q  9 gacccacttagtggtaggacccaccatctattttttgtgtctttctctctc 59  Q
    ||||||||||||| ||||||||||||  |||||||||||||| ||||||||    
T  34612584 gacccacttagtgataggacccaccacttattttttgtgtctatctctctc 34612634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 472
Target Start/End: Complemental strand, 31201249 - 31201148
Alignment:
Q  371 gtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttcc 470  Q
    |||| ||||||||||| | || || |||||||||| | |||| || |||||||| ||||| |||||||||||  ||  |||||||||||| ||||| |||    
T  31201249 gtccctgaattttcacgggtcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctcc 31201150  T
Q  471 gt 472  Q
    ||    
T  31201149 gt 31201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 476
Target Start/End: Original strand, 31821428 - 31821541
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||||||| |||||||||||   || |  || ||||||||| |||| || |||||||| | |||||||| ||||||  ||  |||||||||||| |    
T  31821428 tcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaatttatcagacgtccatcaaaaag 31821527  T
Q  463 gtccttccgtccaa 476  Q
    |||| |||||||||    
T  31821528 gtccctccgtccaa 31821541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 488
Target Start/End: Complemental strand, 38882911 - 38882786
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||||||||||||||||||| |||| |  |||||| ||| | || | || || ||||| ||||| |||||||||||  ||  ||||||| ||||      
T  38882911 tcaaattcgtccttgaattttcacggatcggtcaaattcatccttcaactatgcgagatatcaatttaatccctgaatttgtcagacgtccataaaaaat 38882812  T
Q  463 gtccttccgtccaaaagctccgttag 488  Q
    |||| |||||||||  ||||||||||    
T  38882811 gtccctccgtccaagtgctccgttag 38882786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 15308347 - 15308261
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||| | ||||||||||||| |   ||| || || |||||||||||||| |  |||||||| | |||||||||||||||    
T  15308347 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15308261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 15488716 - 15488630
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||| | ||||||||||||| |   ||| || || |||||||||||||| |  |||||||| | |||||||||||||||    
T  15488716 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 17867712 - 17867654
Alignment:
Q  12 ccacttagtggtaggacccaccatctatttttt-gtgtctttctctctccaacttgcaa 69  Q
    |||||||||| ||||||||||||  |||||||| |||||| ||||||||||| ||||||    
T  17867712 ccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 17867654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 442
Target Start/End: Original strand, 24526911 - 24526985
Alignment:
Q  368 ttcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||||| ||||||| ||| | || || || ||||||||| |||| ||||||||||| ||||| |||||||||||    
T  24526911 ttcgtccctgaatttacacgggtcggccaacttcgtccctcaattatgtgaaatatcaatttaatccctgaattt 24526985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 421
Target Start/End: Original strand, 38881438 - 38881496
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaat 421  Q
    ||||||||||||||||||||||||  |||||| |||||| ||||| |||| || |||||    
T  38881438 tcaaattcgtccttgaattttcacgaatcagccaaattcatccctcaattatgcgaaat 38881496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 42761734 - 42761808
Alignment:
Q  10 acccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttatttt 84  Q
    ||||||| |||||||||| |||| ||||||||| ||||||| ||||||| ||| ||||  |  ||||||||||||    
T  42761734 acccactgagtggtaggatccactatctattttatgtgtctatctctcttcaaattgcgtacttccatttatttt 42761808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 460
Target Start/End: Complemental strand, 462484 - 462387
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaa 460  Q
    ||||||||||| ||||||||| || |||| || |||||| ||| | |||| || |||||||| | ||||||| |||||||  ||  ||||||||||||    
T  462484 tcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgtcaaacgtccatcaaaa 462387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 488
Target Start/End: Complemental strand, 15145808 - 15145751
Alignment:
Q  431 gtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||||||| |||  |||| |||||||| ||||||||||||||| |||| |||||    
T  15145808 gtccctgaatttaacaaacgtcgatcaaaatagtccttccgtccaaatgctctgttag 15145751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 477
Target Start/End: Original strand, 37801541 - 37801590
Alignment:
Q  428 ttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaa 477  Q
    ||||||||||||||| |||  |||| |||||| |||||||||||||||||    
T  37801541 ttagtccctgaatttaacaaacgtcaatcaaattggtccttccgtccaaa 37801590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 412
Target Start/End: Original strand, 600763 - 600819
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaatt 412  Q
    |||||||||||||||||||||||||||| |   |||||| || ||||||| ||||||    
T  600763 taatacctcaaattcgtccttgaattttgaaaaatcagccaatttcgtccttgaatt 600819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 1e-45; HSPs: 87)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 9559110 - 9559009
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9559110 ggacccacttagtggtaggacccaccatctattttttgtatctatctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 9559011  T
Q  108 ca 109  Q
    ||    
T  9559010 ca 9559009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 4888486 - 4888586
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4888486 ggacctacttagtggtaggacccactatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgtcaaatggagaggatcttcacc 4888585  T
Q  108 c 108  Q
    |    
T  4888586 c 4888586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 21151171 - 21151272
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||||||||||||||||||| || |||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21151171 ggacccacttagtggtaggatcctccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacc 21151270  T
Q  108 ca 109  Q
    ||    
T  21151271 ca 21151272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 39859350 - 39859218
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| || ||||| |||||||||||||| |||||||||||||||||| |||||||||||  ||||| |    
T  39859350 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtccgt 39859251  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||||||||||||    
T  39859250 caaaatggtccctccgtccaaaagctccgttag 39859218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 44647984 - 44648083
Alignment:
Q  9 gacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    ||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  44647984 gacccacttagtggtcggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 44648083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 6602338 - 6602470
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||| |||||||||| ||||||||||| |   ||| |||||| |  ||||||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  6602338 taataactcaaattcgaccttgaattttaaaaaatcggctaaacttatccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 6602437  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||||||||||||    
T  6602438 caaaatggtccctccgtccaaaagctccgttag 6602470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 353 - 488
Target Start/End: Complemental strand, 37796305 - 37796170
Alignment:
Q  353 gagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtc 452  Q
    ||||||||||||||||| |||||||||||||||   |||||| ||||||||||   ||||||| |||||||||||||||||||||||||||||   ||||    
T  37796305 gagtaatacctcaaatttgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgcgaaatatctatttagtccctgaattttacggacgtc 37796206  T
Q  453 catcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||| |||| |||||||| ||||||||||||    
T  37796205 catcaaaatagtccctccgtccataagctccgttag 37796170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 45260479 - 45260384
Alignment:
Q  12 ccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  45260479 ccacttagtggtaggatccacaatctattttttgtgtctatctctctccaacttgcaaaactcaatttattttgccaaatggagaggatcttcacc 45260384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 12139349 - 12139446
Alignment:
Q  11 cccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||| |||| ||||||||||    
T  12139349 cccacttaatggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaacttcatttattttgccaaatgaagagaatcttcaccc 12139446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 16366537 - 16366637
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||| ||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  16366537 ggacacacttagtggtaggatccaccatctatttcttatgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacc 16366636  T
Q  108 c 108  Q
    |    
T  16366637 c 16366637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 37115647 - 37115515
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||| ||||||||| |   |||||  |||||||| |||||||||||  ||||||||||||||| |||||||||||||  |||||||    
T  37115647 taatacctcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagtacctgaattttacagacgtccat 37115548  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||| |||| |||||||||||||||||||||    
T  37115547 caaaatagtccctccgtccaaaagctccgttag 37115515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 47386330 - 47386198
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||||||||||||||||||| |||||| |   |||||  |||||||||| ||||||||| ||||||| ||||||||| || |||||||||  |||||||    
T  47386330 taatacctcaaattcgtcctttaattttaaaaaatcagtcaaattcgtccttgaattttgcgaaatatttatttagtctctaaattttacagacgtccat 47386231  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||||| ||||||||||||||||||||||    
T  47386230 caaaatggtcattccgtccaaaagctccgttag 47386198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 350 - 488
Target Start/End: Complemental strand, 34777042 - 34776904
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactc 449  Q
    ||||| ||||||||||||||||| ||| |||||| |   ||  || |||||| | ||||||||||| ||||||||||||||||||||||||||||||  |    
T  34777042 attgattaatacctcaaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtccctgaattttacagac 34776943  T
Q  450 gtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  34776942 gtccatcaaaatggtccctccgtccaaaaactccgttag 34776904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 18198275 - 18198375
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||| |||||||||| || |||||||||||||||||||||||| | | ||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  18198275 ggactcacttagtggcagaacccaccatctattttttgtgtctatttatctccaatttgcaaaactccatttattttgccaaatggagaggatcttcacc 18198374  T
Q  108 c 108  Q
    |    
T  18198375 c 18198375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 24228530 - 24228398
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||||||||| ||||| |||||||||| |   ||  || |||||||||||||||||||| ||||||||||||||||| ||||||||||||  |||||||    
T  24228530 taatacctcaatttcgttcttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattttacagacgtccat 24228431  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| | |||||||||||||| ||||    
T  24228430 caaaatggtcccttcgtccaaaagctccattag 24228398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 38474264 - 38474132
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||| ||||| ||||||| |   ||| |  |||||||||||||||||||| |||||||||||||||||| |||||||||||  || | ||    
T  38474264 taatacctcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcctat 38474165  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||||||||||||    
T  38474164 caaaatggtccatccgtccaaaagctccgttag 38474132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 7362589 - 7362686
Alignment:
Q  10 acccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||| |||||||||| |||||||||||    
T  7362589 acccatttagtggtacgacccaccatctattttttgtgtctatctctctccaatttgcaaaactccatttattttgtcaaatggaga-gatcttcaccc 7362686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 47226130 - 47226035
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttca 105  Q
    ||||||| |||||||| |||||||||||  ||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  47226130 ggacccatttagtggtgggacccaccat--attttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 47226035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 396 - 488
Target Start/End: Original strand, 13168163 - 13168258
Alignment:
Q  396 aaattcgtccctgaattttgtgaaatatctatttagtccct---gaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||||| ||||||||| ||||||||||||||||||||   ||||||||||  |||||||||||||||||| |||||||||||||||||||||    
T  13168163 aaattcgtccttgaattttgcgaaatatctatttagtccctcctgaattttacagacgtccatcaaaatggtccatccgtccaaaagctccgttag 13168258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 479
Target Start/End: Complemental strand, 27666192 - 27666063
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactc 449  Q
    ||||| |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||| |||||||| | |||||||||||||||||||  |    
T  27666192 attgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaac 27666093  T
Q  450 gtccatcaaaatggtccttccgtccaaaag 479  Q
    ||||||||||   |||| ||||||||||||    
T  27666092 gtccatcaaatccgtccctccgtccaaaag 27666063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 33450525 - 33450626
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctatt-ttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcac 106  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||| ||||||| ||| |||||||||  ||||||||||||||||| ||    
T  33450525 ggacccacttagtggttggacccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaatggagaggatcttaac 33450624  T
Q  107 cc 108  Q
    ||    
T  33450625 cc 33450626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 30940546 - 30940414
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||| ||||| || |||||||||| |   ||| || ||||||||| || ||||||  ||||||||||||||||||||||||||||||  ||| |||    
T  30940546 taataccttaaatttgttcttgaattttaaaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattttacaaacgttcat 30940447  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||  |||||||||||||||||||||    
T  30940446 caaaatggtctctccgtccaaaagctccgttag 30940414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 396 - 488
Target Start/End: Original strand, 45359379 - 45359471
Alignment:
Q  396 aaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||| ||||| ||||||||| |||||||||||||||||| |||||||||||  |||||||||||||||||| ||| |||||||||||||||||    
T  45359379 aaatccgtccttgaattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccatccaaaagctccgttag 45359471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 13169769 - 13169683
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||||||||||||||||||||||||||||   ||| || ||||| |||||||||||||| ||||||||||||||||||||||||||    
T  13169769 taatacctcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 13169683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 989148 - 989239
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggat 100  Q
    ||||| ||||||||||||||||||| || |||||||||||||| ||||||||||| ||||||| ||||||||| |||| ||||||||||||||    
T  989148 ggacctacttagtggtaggacccactatatattttttgtgtctatctctctccaaattgcaaa-ctccatttaatttgtcaaatggagaggat 989239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 25084784 - 25084690
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctcca--tttattttgccaaatggagaggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||  |  ||| |||| |||||||||||||||    
T  25084784 ggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttacaaaactttatttttttttttccaaatggagaggat 25084690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 356 - 458
Target Start/End: Original strand, 56333 - 56435
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||| |||||||| | |||||||||||||||||||  |||||||    
T  56333 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccat 56432  T
Q  456 caa 458  Q
    |||    
T  56433 caa 56435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 47500339 - 47500238
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctatt-ttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcac 106  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||| || |||| ||| |||||||||   |||||||||||||||| ||    
T  47500339 ggacccacttagtggttggacccaccatctattcttttgtgtctatctctctccaaattacaaaactcaatttattttagtaaatggagaggatcttaac 47500240  T
Q  107 cc 108  Q
    ||    
T  47500239 cc 47500238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 39855869 - 39855766
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||||||||||||||||||||| ||||||| |||| ||||||| ||||||||||| || |||| ||||||||| |||| |||||| |||| ||||| |||    
T  39855869 ggacccacttagtggtaggaccgaccatcttttttatgtgtctatctctctccaaattacaaa-ctccatttaatttgtcaaatgaagagaatcttaacc 39855771  T
Q  108 cagtt 112  Q
    |||||    
T  39855770 cagtt 39855766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 350 - 442
Target Start/End: Original strand, 39857642 - 39857734
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||| |||||||||||||||||||||||||||| |   ||| |  |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  39857642 attgattaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaattt 39857734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 487
Target Start/End: Complemental strand, 29996635 - 29996504
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| |  || || |||||||||||||| |||||||| | ||| |||||||||||||||  |||||||    
T  29996635 taatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttacagacgtccat 29996536  T
Q  456 caaaatggtccttccgtccaaaagctccgtta 487  Q
    |||| | |||| ||| |||||||| |||||||    
T  29996535 caaattcgtccctccatccaaaaggtccgtta 29996504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 356 - 430
Target Start/End: Original strand, 38549550 - 38549624
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctattta 430  Q
    |||||||| |||||||||||||||||||||   |||||| || ||||||||||||||||||||||||||||||||    
T  38549550 taataccttaaattcgtccttgaattttcaaaaatcagccaagttcgtccctgaattttgtgaaatatctattta 38549624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 47271180 - 47271107
Alignment:
Q  31 accatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttca 105  Q
    |||||| ||||||||||||| ||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  47271180 accatcaattttttgtgtctatctctctccaaattgcaaa-ctccatttattttgctaaatggagaggatcttca 47271107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 47384287 - 47384383
Alignment:
Q  346 atacattgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||| || |||||||||||||||||||||||||||| |   || ||| |||||||||| ||||||||| |||||||||| |||||||| ||||||    
T  47384287 atacatagactaatacctcaaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaattt 47384383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 35403710 - 35403619
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||| |||||||| | |||||||||||||||    
T  35403710 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35403619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 24226584 - 24226670
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||||||||||||||||||||||||||||   ||| || |||||||||| ||||||||| |||||| |||||| |||| |||||||    
T  24226584 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattttgtccttgaattt 24226670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 35401972 - 35402058
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||| |||||||||||||||||||||| |   ||| ||||| ||||||||||||||||| |||||||| | |||||||||||||||    
T  35401972 taatatctcaaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35402058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 46437110 - 46437196
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||||||||||||||||||||||||||||   |||||| |||||||||  ||||||||| |||||| |||||| |||| |||||||    
T  46437110 taatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtcgttgaattttgcgaaatagctattttgtccttgaattt 46437196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 363 - 488
Target Start/End: Original strand, 27955380 - 27955505
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    ||||||||||||||||||||| || |||||||||||||| ||||| ||||||  |||||||| | ||| |  ||||||||  ||  |||||||||||  |    
T  27955380 tcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaacttaatttctgaatttgtcagacgtccatcaaagag 27955479  T
Q  463 gtccttccgtccaaaagctccgttag 488  Q
    |||| |||||||||  ||||||||||    
T  27955480 gtccctccgtccaagtgctccgttag 27955505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 431 - 487
Target Start/End: Complemental strand, 23906307 - 23906251
Alignment:
Q  431 gtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgtta 487  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  23906307 gtccctaaattttacagtcgtccatcaaaatggtccctccgtccaaaagctccgtta 23906251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 396 - 488
Target Start/End: Complemental strand, 35693453 - 35693359
Alignment:
Q  396 aaattcgtccctgaattttgtgaaatatctat--ttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||||| ||||||||| | ||||||| |  |||||||||||||||||||  |||||||||||||||||| ||| |||||||| || |||||    
T  35693453 aaattcgtccttgaattttgcggaatatctctaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagttctgttag 35693359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 353 - 476
Target Start/End: Original strand, 13018033 - 13018158
Alignment:
Q  353 gagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaa--atatctatttagtccctgaattttacactcg 450  Q
    |||||||||||||||||| |||||||||||| |   |||||| ||||||||||   ||||| | |||  ||||||||||  || |||||||| |||  ||    
T  13018033 gagtaatacctcaaattcatccttgaattttaaaaaatcagccaaattcgtcctcaaatttagcgaaatatatctatttcatctctgaatttaacatacg 13018132  T
Q  451 tccatcaaaatggtccttccgtccaa 476  Q
    |||||||||||||||| |||||||||    
T  13018133 tccatcaaaatggtccctccgtccaa 13018158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 37113944 - 37114030
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||  |  |||||| ||||||||||||| |||||||||||||||||||| |||||    
T  37113944 taatacctcaaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaattt 37114030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 443
Target Start/End: Complemental strand, 13039722 - 13039641
Alignment:
Q  362 ctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaatttt 443  Q
    ||||| ||||||||||||||||||   ||||   |||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  13039722 ctcaagttcgtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaatttt 13039641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 476
Target Start/End: Complemental strand, 33038911 - 33038798
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    ||||||||||||||||||||| |  | || |  |||||| ||||| |||| || |||||||| | |||||||||||||||| ||  |||||||||||| |    
T  33038911 tcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtccatcaaaaag 33038812  T
Q  463 gtccttccgtccaa 476  Q
    |||| |||||||||    
T  33038811 gtccctccgtccaa 33038798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 34985994 - 34985909
Alignment:
Q  16 ttagtggtaggacccaccatctatt-ttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggat 100  Q
    ||||||||  ||||||||||||||| |||||||||| ||||||||||| ||||||| ||| |||||||||  ||||| ||||||||    
T  34985994 ttagtggtttgacccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaattgagaggat 34985909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 488
Target Start/End: Complemental strand, 46996816 - 46996691
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||||||| |||||||||||   || || || ||||||||| |||| || |||||||| | |||||| ||||||||  ||  |||||||||||| |    
T  46996816 tcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgtccatcaaaaag 46996717  T
Q  463 gtccttccgtccaaaagctccgttag 488  Q
    |||| |||||||||  ||||||||||    
T  46996716 gtccctccgtccaagtgctccgttag 46996691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 6605489 - 6605397
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||| |||||||||||||| ||||||||||||| |   ||| |  ||||| || ||||||||||| |||||| |||||||||||||||||||    
T  6605489 attgattaatacctcaaatttgtccttgaattttaaaaaatcggtcaaatttgttcctgaattttgcgaaatagctatttagtccctgaattt 6605397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 22155939 - 22155847
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||| |||||||| || ||||||||||||||||||   ||| || |||||||||| |||||||||  ||||| |||||| ||||||||||||    
T  22155939 attgactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaattt 22155847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 22211854 - 22211762
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||| |||||||| || ||||||||||||||||||   ||| || |||||||||| |||||||||  ||||| |||||| ||||||||||||    
T  22211854 attgactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaattt 22211762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 487
Target Start/End: Original strand, 20478045 - 20478176
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||| | ||||||||||||| |   ||| || || ||||| ||||||||||  |||||||| | |||||||||||||||| ||  |||||||    
T  20478045 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtacctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccat 20478144  T
Q  456 caaaatggtccttccgtccaaaagctccgtta 487  Q
    ||||   |||| |||||||||||  |||||||    
T  20478145 caaatcagtccctccgtccaaaatgtccgtta 20478176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 29631067 - 29631166
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||| || ||||||| |||||||| |||||| |||||||||| |||||   ||| ||||||| ||||||||||||| ||||||||||||||| || |||    
T  29631067 ggacctacatagtggttggacccactatctatgttttgtgtctatctctt--caaattgcaaa-ctccatttattttaccaaatggagaggatattaacc 29631163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 46802387 - 46802336
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctc 59  Q
    |||||||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  46802387 ggacccacttagtggtaggacccaccgtctattttttatgtctatctctctc 46802336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 47341800 - 47341721
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||| | || || |||||| ||||| |||| || |||||||| | |||||||||||||||    
T  47341800 tcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaattt 47341721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 409 - 488
Target Start/End: Complemental strand, 48852415 - 48852336
Alignment:
Q  409 aattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||  ||||||||||||| ||| |||||||||||  |||||||||||||||||  || |||||||||||| |||||    
T  48852415 aattttgcaaaatatctatttaatccttgaattttacagacgtccatcaaaatggtctctcggtccaaaagctctgttag 48852336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 48228027 - 48227941
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||| ||||||||| |   ||| |  |||||||||  ||||||||| ||||||||||||| ||||||||||||    
T  48228027 taatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtctttgaattttgcgaaatatctattttgtccctgaattt 48227941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 357 - 442
Target Start/End: Original strand, 35691431 - 35691516
Alignment:
Q  357 aatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||||   ||| |  ||||||||| || ||||||| |||||| |||||| |||| |||||||    
T  35691431 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtctctaaattttgcgaaatagctattttgtccttgaattt 35691516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 476
Target Start/End: Complemental strand, 46812696 - 46812583
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||| |||||||||||||||| ||   || || |||||| ||||| ||||  |||||||||| ||||||||||| |||||  ||  |||||||||||| |    
T  46812696 tcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgtcagacgtccatcaaaaag 46812597  T
Q  463 gtccttccgtccaa 476  Q
    ||| ||||||||||    
T  46812596 gtcattccgtccaa 46812583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 47799956 - 47799895
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    |||||||||||||| ||||||||| ||  |||||||||||||| ||||||||||| ||||||    
T  47799956 ggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaaattgcaa 47799895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 409 - 488
Target Start/End: Original strand, 1546343 - 1546422
Alignment:
Q  409 aattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||| |||||||| |||  |||| |||||||  | | |||||||||||||||||| |||||||||||| ||||||||    
T  1546343 aattttgcgaaatatcaattgcgtccttgaatttctctcacgtccatcaaaatggtccctccgtccaaaaggtccgttag 1546422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 377 - 472
Target Start/End: Complemental strand, 35344390 - 35344295
Alignment:
Q  377 gaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgt 472  Q
    |||||||||| | ||||| |||||||||||| |||| || |||||||| ||||| |||||||||||   |  |||||||||||| ||||| |||||    
T  35344390 gaattttcacgggtcagccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttataagacgtccatcaaaaaggtccctccgt 35344295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 38613595 - 38613516
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||| ||||||||| | || || |||||| ||||| |||| || |||||||| | |||||||||||||||    
T  38613595 tcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaattt 38613516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 46810715 - 46810794
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| ||||||| ||||||||||| |||| || ||||| |||||| |||| || |||||||| ||||| |||||||||||    
T  46810715 tcaacttcgtccctgaattttcacggatcggccaaattagtccctcaattatgcgaaatatcaatttaatccctgaattt 46810794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 78100 - 78014
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||| ||||||||| |   ||| || || |||||||||||||||||  ||||||| | || ||||||||||||    
T  78100 taatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaattt 78014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 20479805 - 20479719
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||| | ||||||||||||| |   ||| || || ||||||||||||||||  |||||||| | |||||||||||||||    
T  20479805 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 20479719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 27664433 - 27664519
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||| ||||||||||||| |   ||| || || || ||||||||||||||  ||||||| | |||||||||||||||    
T  27664433 taatacctcaaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaattt 27664519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 32915975 - 32916056
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaa 90  Q
    |||| |||||| ||||||||||||| || |||||||||||||| ||||||| ||| |||| |  ||||||||||||| |||||    
T  32915975 ggactcacttaatggtaggacccactatttattttttgtgtctatctctcttcaaattgc-atcctccatttattttaccaaa 32916056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 431 - 488
Target Start/End: Original strand, 6056844 - 6056901
Alignment:
Q  431 gtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||| ||||||| |||  ||||||||||||| ||||||||||||||| ||||||||||    
T  6056844 gtccttgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccgttag 6056901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 472
Target Start/End: Complemental strand, 8423387 - 8423286
Alignment:
Q  371 gtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttcc 470  Q
    |||| ||||||||||| | ||||| ||||| |||||| |||| || |||||||| ||||| |||||||||||  ||  |||| ||||||| ||||| |||    
T  8423387 gtccctgaattttcacgggtcagccaaatttgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtcaatcaaaaaggtccctcc 8423288  T
Q  471 gt 472  Q
    ||    
T  8423287 gt 8423286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 488
Target Start/End: Original strand, 23953815 - 23953940
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||||||||| |||||| || | || |  |||||||||| | |||| || |||||||| | ||||||| |||||||  ||  |||| ||||||| |    
T  23953815 tcaaattcgtccttaaatttttacgggtcggtaaaattcgtccatcaattatgcgaaatatcaacttagtccgtgaatttgtcagacgtcaatcaaaaag 23953914  T
Q  463 gtccttccgtccaaaagctccgttag 488  Q
    |||| |||||||||  ||||||||||    
T  23953915 gtccctccgtccaagtgctccgttag 23953940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 33608901 - 33608845
Alignment:
Q  39 ttttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggaga 96  Q
    |||||||||| | ||||||||||| ||||||| ||||||||||||| |||||||||||    
T  33608901 ttttttgtgtttatctctctccaaattgcaaa-ctccatttattttaccaaatggaga 33608845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 35737132 - 35737193
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    |||||||| ||||| | ||||||||||  |||||||||||||| ||||||||||| ||||||    
T  35737132 ggacccacctagtgatgggacccaccacttattttttgtgtctatctctctccaaattgcaa 35737193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 29844316 - 29844364
Alignment:
Q  14 acttagtggtaggacccaccatctattttttgtgtctttctctctccaa 62  Q
    |||||||||||| |||||| ||||||||| ||||||| |||||||||||    
T  29844316 acttagtggtagaacccactatctattttatgtgtctatctctctccaa 29844364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 4321048 - 4321127
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| ||||||| ||||||||||| | || || || ||||||||| |||| || |||||||| ||||| |||||||||||    
T  4321048 tcaacttcgtccctgaattttcacgggtcggccaacttcgtcccttaattatgcgaaatatcaatttaatccctgaattt 4321127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 19027736 - 19027685
Alignment:
Q  12 ccacttagtggtaggacccaccatcta-ttttttgtgtctttctctctccaa 62  Q
    |||||||||| ||||||||||||| || |||||||||||| |||||||||||    
T  19027736 ccacttagtgataggacccaccatttatttttttgtgtctatctctctccaa 19027685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 20726900 - 20726951
Alignment:
Q  12 ccacttagtggtaggacccaccatcta-ttttttgtgtctttctctctccaa 62  Q
    |||||||||| ||||||||||||| || |||||||||||| |||||||||||    
T  20726900 ccacttagtgataggacccaccatttatttttttgtgtctatctctctccaa 20726951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 36762761 - 36762682
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| ||||||| |||||||| || |||| || ||||| |||||| |||| ||||||||||| |||||  ||||||||||    
T  36762761 tcaacttcgtccctgaatttttacggatcggccaaattagtccctcaattatgtgaaatatcaatttaacccctgaattt 36762682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 40785629 - 40785550
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| ||||||||||||||||||| | || || |||||| || || |||| ||||||||||| || || |||||||||||    
T  40785629 tcaatttcgtccttgaattttcacgggtcggccaaattcatctctcaattatgtgaaatatcaatctaatccctgaattt 40785550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 14696810 - 14696752
Alignment:
Q  12 ccacttagtggtaggacccaccatctatttttt-gtgtctttctctctccaacttgcaa 69  Q
    |||||||||| ||||||||||||  |||||||| |||||| ||||||||||| ||||||    
T  14696810 ccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 14696752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 426 - 488
Target Start/End: Original strand, 23962377 - 23962439
Alignment:
Q  426 atttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||| |||||||||||| |||  |||| |||||||| ||||||||||| ||| ||||||||||    
T  23962377 attttgtccctgaatttaacaaacgtcaatcaaaatagtccttccgtcaaaatgctccgttag 23962439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 477
Target Start/End: Original strand, 40784356 - 40784470
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||||| |||||||||| ||   |||||||||||| ||| | |||| || |||||||| | ||||||  |||||||  ||  | |||||||||| |    
T  40784356 tcaaattcgttcttgaatttttacgcgtcagctaaattcatccttcaattatgcgaaatatcaacttagtctttgaatttgtcagacatccatcaaaaag 40784455  T
Q  463 gtccttccgtccaaa 477  Q
    |||| ||||||||||    
T  40784456 gtccctccgtccaaa 40784470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 7712421 - 7712329
Alignment:
Q  10 acccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatctt 103  Q
    ||||||||| ||||||||| ||| |||||| || ||| ||| |||||||| || |||||  | ||||||||||||   ||||||||||||||||    
T  7712421 acccacttaatggtaggactcactatctatcttatgtctctatctctctctaaattgcatct-tccatttatttttataaatggagaggatctt 7712329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 413
Target Start/End: Original strand, 29994909 - 29994966
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattt 413  Q
    |||||||||||||||||||||||||||| |   ||| || || |||||||||||||||    
T  29994909 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattt 29994966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 488
Target Start/End: Original strand, 31913547 - 31913604
Alignment:
Q  431 gtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||||||  |||  ||||||||||||| || |||||||||||| ||||||||||    
T  31913547 gtccctgaattcaacaaacgtccatcaaaatagttcttccgtccaaatgctccgttag 31913604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 476
Target Start/End: Original strand, 2167522 - 2167602
Alignment:
Q  396 aaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaa 476  Q
    |||||| ||||| |||| || |||||||| | |||||||||||||||  ||  || ||||||||| ||||| |||||||||    
T  2167522 aaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgcccatcaaaaaggtccctccgtccaa 2167602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 37791656 - 37791744
Alignment:
Q  355 gtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaatttt 443  Q
    ||||||||| || |||||| || |||||| |   |||||| |||||| ||||  |||||||  ||||||||||||||||||| ||||||    
T  37791656 gtaatacctaaacttcgtctttaaattttaaaaaatcagccaaattcatccccaaattttgccaaatatctatttagtccctaaatttt 37791744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 44390813 - 44390896
Alignment:
Q  24 aggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||| |||||| || |||||| ||||| ||||||||||| |||||  | ||||||||||||   |||||||||||||||| ||||    
T  44390813 aggatccaccaccttttttttttgtctatctctctccaaattgcatct-tccatttatttttataaatggagaggatcttaaccc 44390896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 4e-45; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 53190900 - 53190768
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  53190900 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 53190801  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||||||||||||    
T  53190800 caaaatggtccctccgtccaaaagctccgttag 53190768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 351 - 488
Target Start/End: Original strand, 51684608 - 51684745
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcg 450  Q
    |||| ||||| ||||||||||||||||||||||||   |||||| |||||| |||||||||||||  ||||||||||||||||| |||||||||||  ||    
T  51684608 ttgactaatatctcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagacg 51684707  T
Q  451 tccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||||||||||| |||||||||||||||||||||    
T  51684708 tccatcaaaatggtccctccgtccaaaagctccgttag 51684745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 27899222 - 27899090
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| || |||||||||| ||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  27899222 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 27899123  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
     |||||||||| |||||||||||||||||||||    
T  27899122 aaaaatggtccctccgtccaaaagctccgttag 27899090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 19830487 - 19830386
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||| ||||||||||||||||||||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19830487 ggacccacttaatggtaggacccaccatctattttttgtgtctatttctccccaacttgcaaaactccatttattttgccaaatggagaggatcttcacc 19830388  T
Q  108 ca 109  Q
    ||    
T  19830387 ca 19830386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 351 - 488
Target Start/End: Original strand, 54898435 - 54898572
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcg 450  Q
    |||| |||||||||||||||||||||||||||| |   ||| |  |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||    
T  54898435 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 54898534  T
Q  451 tccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    | |||||||||||||  |||||||||||||||||||||    
T  54898535 ttcatcaaaatggtctctccgtccaaaagctccgttag 54898572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 21348726 - 21348858
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||| ||||||||||||| |   ||| || |||||||||| ||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  21348726 taatacctcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 21348825  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| ||||||||||||||| |||||    
T  21348826 caaaatggtccctccgtccaaaagctctgttag 21348858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 352 - 488
Target Start/End: Original strand, 42279506 - 42279642
Alignment:
Q  352 tgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgt 451  Q
    |||||||||||||||||||||| |||||||||||   ||||||| |||||||| | ||||||||  |||||||||||||||||||||||||||||  |||    
T  42279506 tgagtaatacctcaaattcgtcattgaattttcaaaaatcagctcaattcgtctcagaattttgcaaaatatctatttagtccctgaattttacagacgt 42279605  T
Q  452 ccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    | ||||||||||||| ||||||||||||||| |||||    
T  42279606 ctatcaaaatggtccctccgtccaaaagctctgttag 42279642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 2230006 - 2230103
Alignment:
Q  12 ccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccca 109  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  2230006 ccacttagtggtaggacccatcatctattttttgtgtctatctctctccaacttgcaaaactccaattattttgccaaatggagaggatgttcaccca 2230103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 43720003 - 43719902
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  43720003 ggacccacttagtggtaggacccacaatttattttttgtgtctatctctctccaacttgcaaaactccatttattttgttaaatggagaggatcttcacc 43719904  T
Q  108 ca 109  Q
    ||    
T  43719903 ca 43719902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 2226293 - 2226161
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||    
T  2226293 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcat 2226194  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||| ||| ||||||||||| ||| |||||    
T  2226193 caaaatgttccctccgtccaaaaactctgttag 2226161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 24754676 - 24754776
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  24754676 ggacccacttagtggtaggacataccatctattttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcacc 24754775  T
Q  108 c 108  Q
    |    
T  24754776 c 24754776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 24763673 - 24763773
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  24763673 ggacccacttagtggtaggacataccatctattttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcacc 24763772  T
Q  108 c 108  Q
    |    
T  24763773 c 24763773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 30600059 - 30599927
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||||||||||||||||||| |||||| ||  ||| || ||||| |||||||||||||| |||||||||||||||||||||||||||| |  |||| ||    
T  30600059 taatacctcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgtcgat 30599960  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| ||||||||||||||| |||||    
T  30599959 caaaatggtccctccgtccaaaagctctgttag 30599927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 34373858 - 34373953
Alignment:
Q  16 ttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacccagt 111  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | | |||||||||||||||||||||| |||||||||||||    
T  34373858 ttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaacacaatttattttgccaaatggagagaatcttcacccagt 34373953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 27033674 - 27033771
Alignment:
Q  12 ccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccca 109  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||  |||||||||| ||||||||||||    
T  27033674 ccacttagtggtaggacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagatgatcttcaccca 27033771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 43765140 - 43765272
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||||||||||||||||||||||||||||   ||| |  |||||||| || |||||||| ||||||||||||||||  ||||||||||||  |||||||    
T  43765140 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtccat 43765239  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| ||| |||||||||||||||||    
T  43765240 caaaatggtccctccatccaaaagctccgttag 43765272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 40851792 - 40851891
Alignment:
Q  7 aggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcac 106  Q
    ||||||||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  40851792 aggacccacttagtggttgaacccaccatctattttttgtgtctatctttctccaacttgcaaaactccatttattttgtcaaattgagaggatcttcac 40851891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 7 - 105
Target Start/End: Original strand, 46167411 - 46167509
Alignment:
Q  7 aggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttca 105  Q
    |||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| ||||||||||||||| ||||||||||||| ||||    
T  46167411 aggatccacttagtggtaggacccaccatatattttttgtgtctatctctctccaacttacaaaactccatttattttgctaaatggagaggatgttca 46167509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 23293311 - 23293179
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||| || |||||||||  |   |||||| ||||||| || ||||||||| |||||||||||||||||| |||||||||||  |||||||    
T  23293311 taatacctcaaatttgttcttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtccatgaattttacaaacgtccat 23293212  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||| |||| |||||||||||||||||||||    
T  23293211 caaaatagtccctccgtccaaaagctccgttag 23293179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 396 - 484
Target Start/End: Complemental strand, 35905813 - 35905725
Alignment:
Q  396 aaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccg 484  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||||||||||| |||||||||||||||||    
T  35905813 aaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtccctccgtccaaaagctccg 35905725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 356 - 487
Target Start/End: Original strand, 41977753 - 41977884
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| || |||| ||||||||||||| | |||||||| | |||||||||||||||||||  ||||| |    
T  41977753 taatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtccgt 41977852  T
Q  456 caaaatggtccttccgtccaaaagctccgtta 487  Q
    ||||||||||| |||||||||||||| |||||    
T  41977853 caaaatggtccctccgtccaaaagcttcgtta 41977884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 17515313 - 17515445
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||||||||||||| |||||||||||| |   ||  || |||||| || |||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  17515313 taatacctcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 17515412  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| || |||||||| | |||||||    
T  17515413 caaaatggtccctctgtccaaaatcaccgttag 17515445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 356 - 481
Target Start/End: Original strand, 46112490 - 46112615
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| || ||||||||   |||||||||  ||||||||||||||||| |||||||||||  |||||||    
T  46112490 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacagacgtccat 46112589  T
Q  456 caaaatggtccttccgtccaaaagct 481  Q
    ||||||||||| ||||| ||||||||    
T  46112590 caaaatggtccctccgttcaaaagct 46112615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 48084838 - 48084939
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctatt-ttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcac 106  Q
    |||||||||||||||| |||||||||||||||| |||||||||| |||||| |||| ||||||| ||| |||||||||  ||||||||||||||||| ||    
T  48084838 ggacccacttagtggttggacccaccatctattcttttgtgtctatctctccccaaattgcaaaactcaatttattttagcaaatggagaggatcttaac 48084937  T
Q  107 cc 108  Q
    ||    
T  48084938 cc 48084939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 2377032 - 2377164
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||  |||||||||||   ||   | ||||||||||||||||||||  ||| || ||||||||| ||||||||||||  |||||||    
T  2377032 taatacctcaaattcgtttttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaatatatttagtctctgaattttacagacgtccat 2377131  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||| | |||||| ||||||||||||||    
T  2377132 caaaatggttcctccgtctaaaagctccgttag 2377164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 34373641 - 34373559
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaa 90  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||| |  |||||||||| ||| |||||||||||||||    
T  34373641 ggacccacttagtggtaggacccaccatctatttttagtgtctatctctatggaacttgcaaaactctatttattttgccaaa 34373559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 359 - 479
Target Start/End: Original strand, 2660218 - 2660338
Alignment:
Q  359 tacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaa 458  Q
    ||||||||||||||||||||||||| |   |||  | || ||||||||||||||||| |||||||| | ||||||| |||||||||||  ||||||||||    
T  2660218 tacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaa 2660317  T
Q  459 aatggtccttccgtccaaaag 479  Q
    | | |||| ||||||||||||    
T  2660318 attcgtccctccgtccaaaag 2660338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 396 - 488
Target Start/End: Original strand, 46197763 - 46197855
Alignment:
Q  396 aaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||| ||||||||||  ||||||||||||||| |||||||||||||  ||||||| |||||||||| | |||||||||| ||||||||    
T  46197763 aaattcgtctctgaattttgcaaaatatctatttagttcctgaattttacagacgtccattaaaatggtcccttcgtccaaaagttccgttag 46197855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 487
Target Start/End: Original strand, 44794211 - 44794341
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| || || ||| ||||||||||||| |||||||| | |||||||||||||||| ||   ||||||    
T  44794211 taatacctcaaattcgtccttgaattttgaaa-atcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttgcagaagtccat 44794309  T
Q  456 caaaatggtccttccgtccaaaagctccgtta 487  Q
    |||| | |||| |||||||||||| |||||||    
T  44794310 caaattcgtccctccgtccaaaaggtccgtta 44794341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 611308 - 611222
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   |||||| |||||||||||||||||||  |||||| |||||||| ||||||||||    
T  611308 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaatttttcgaaatagctatttagcccctgaattt 611222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 23291573 - 23291659
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||| ||||||||||||||||||| |   ||| || |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  23291573 taataccttaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattt 23291659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 42282559 - 42282473
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||||||||||||||||||||||||||||   |||||  ||||||||  |||||||||| |||||||||||||||||| |||||||    
T  42282559 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtttctgaattttgcgaaatatctatttagtccttgaattt 42282473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 363 - 488
Target Start/End: Original strand, 48633887 - 48634012
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||||||||||||||||||| | || |  |||||||||| | |||| || |||||||| | |||||||||||||||  ||  |||||||||||| |    
T  48633887 tcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 48633986  T
Q  463 gtccttccgtccaaaagctccgttag 488  Q
    |||| |||||||||  ||||||||||    
T  48633987 gtccctccgtccaagtgctccgttag 48634012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 356 - 487
Target Start/End: Complemental strand, 3152359 - 3152228
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||||||||||||  ||||| |||||| |   ||| || || ||| ||||||||||||| |||||||| | |||||||||||||||||||  |||||||    
T  3152359 taatacctcaaatttatccttaaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccat 3152260  T
Q  456 caaaatggtccttccgtccaaaagctccgtta 487  Q
    ||||   |||| |||||||||||| |||||||    
T  3152259 caaatccgtccctccgtccaaaaggtccgtta 3152228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 38193596 - 38193510
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||| |||||||| | |||||||||||||||    
T  38193596 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38193510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 41979438 - 41979352
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||| |||||||| | |||||||||||||||    
T  41979438 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 46308810 - 46308896
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||| |||||||| | |||||||||||||||    
T  46308810 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46308896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 434
Target Start/End: Complemental strand, 51686480 - 51686402
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtcc 434  Q
    ||||||||||||||||||||| ||||||||   |||||| |||||||||||| ||||||| ||||||| ||||||||||    
T  51686480 taatacctcaaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttatttagtcc 51686402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 53094359 - 53094273
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||| |||||||| | |||||||||||||||    
T  53094359 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53094273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 399 - 488
Target Start/End: Complemental strand, 19987692 - 19987603
Alignment:
Q  399 ttcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||||||||| |||||||| | ||||||||| |||||||||| |||||||||||   |||| |||||||||||| || |||||    
T  19987692 ttcgtccctgaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgtccaaaaggtctgttag 19987603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 363 - 460
Target Start/End: Original strand, 23774162 - 23774259
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaa 460  Q
    ||||||||||||||||||||||||   || || |||||||||||| |||| || |||||||| |||||||||||||||||  ||  ||||||||||||    
T  23774162 tcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacgtccatcaaaa 23774259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 24647905 - 24647958
Alignment:
Q  56 tctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccca 109  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  24647905 tctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccca 24647958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 442
Target Start/End: Original strand, 46609146 - 46609238
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||| ||||| ||||||||||| |||||||||| |   ||| || || |||||||||||||||||||||||||| | |||||||||||||||    
T  46609146 attgactaatatctcaaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattt 46609238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 53187735 - 53187831
Alignment:
Q  346 atacattgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||||||| |||||||||||||| ||||||||||||| |   ||| |  || ||||||||||||||||| |||||||| | |||||||||||||||    
T  53187735 atacattgactaatacctcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 550872 - 550790
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaat 91  Q
    ||||||||||| || ||||| |||||||||||||||||| | | ||| ||||||| ||||||| ||||||||||||||||||||    
T  550872 ggacccacttaatgataggatccaccatctattttttgtatatatctttctccaaattgcaaa-ctccatttattttgccaaat 550790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 417 - 488
Target Start/End: Complemental strand, 48830886 - 48830815
Alignment:
Q  417 gaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||||||||||||  ||||||||||   |||||||||||||||||| ||||||||||||||| |||||    
T  48830886 gaaatatctatttagtctttgaattttacggacgtccatcaaaatggtccctccgtccaaaagctctgttag 48830815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 364 - 442
Target Start/End: Original strand, 2975471 - 2975549
Alignment:
Q  364 caaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||| || |||||||||||||| ||||| |||  || |||||||| ||||| |||||||||||    
T  2975471 caaattcgtccttgaatttttacggatcagctaaattcatccctcaatgatgcgaaatatcaatttaatccctgaattt 2975549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 3150255 - 3150341
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| |  || ||||||||||||||||| |||||||| | |||||||||||||||    
T  3150255 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 3150341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 30598340 - 30598426
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||||||||||||||||||||||||||||   ||| |  ||||| |||||||||||||| |||||| |||||| |||| |||||||    
T  30598340 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaatttgtccctgaattttgcgaaatagctattttgtccttgaattt 30598426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 44267984 - 44268070
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||||||||||||||||||||||||||||   ||| || |||||| || |||||||||| |||||| |||||| |||| |||||||    
T  44267984 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatctctgaattttgcgaaatagctattttgtccttgaattt 44268070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 44795976 - 44795890
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| ||||| ||||| ||||||||||| |||||||| | ||||||| |||||||    
T  44795976 taatacctcaaattcgtccttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaattt 44795890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 48829359 - 48829437
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtcc 434  Q
    ||||||||||||||||||||||||||||||    ||||| |||||  | ||||||||||| ||||||||||||||||||    
T  48829359 taatacctcaaattcgtccttgaattttcaaaattcagccaaatttattcctgaattttgcgaaatatctatttagtcc 48829437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 54900160 - 54900074
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||| |||||||| | || ||||||||||||    
T  54900160 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaattt 54900074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 488
Target Start/End: Complemental strand, 2977443 - 2977318
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    ||||||||||||||||||||| ||  ||| || |||||| ||||| |||| || |||||||| ||| ||||||| |||||  ||  |||||||||||| |    
T  2977443 tcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgtcatacgtccatcaaaaag 2977344  T
Q  463 gtccttccgtccaaaagctccgttag 488  Q
    |||| |||| ||||  ||||||||||    
T  2977343 gtccatccgcccaagtgctccgttag 2977318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 431 - 488
Target Start/End: Complemental strand, 7884939 - 7884882
Alignment:
Q  431 gtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||||||||  |||||||||||||||||| |||||||||||| ||||||||    
T  7884939 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttccgttag 7884882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 488
Target Start/End: Complemental strand, 18430385 - 18430260
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    ||||||||||||||||||||| || | ||||| |||||| ||||| |||| || |||||||| | ||||||||||||| |  ||  ||||||  |||| |    
T  18430385 tcaaattcgtccttgaattttaacgggtcagccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatatgtcagacgtccaataaaaag 18430286  T
Q  463 gtccttccgtccaaaagctccgttag 488  Q
    |||| |||||||||  ||||||||||    
T  18430285 gtccctccgtccaagtgctccgttag 18430260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 488
Target Start/End: Complemental strand, 23888886 - 23888761
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||||||| |||||||||||   || || || ||||||||| |||| || ||||||||   |||||||||||||||  ||  |||||||||||| |    
T  23888886 tcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgtcaaacgtccatcaaaaag 23888787  T
Q  463 gtccttccgtccaaaagctccgttag 488  Q
    |||| ||||||||||  |||||||||    
T  23888786 gtccctccgtccaaatcctccgttag 23888761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 476
Target Start/End: Complemental strand, 40509025 - 40508912
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||||||||||||||||||| | || || |||||||||||| |||| || |||||||| | ||| ||| |||||||  ||  ||||||||||||      
T  40509025 tcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagacgtccatcaaaaat 40508926  T
Q  463 gtccttccgtccaa 476  Q
    |||| |||||||||    
T  40508925 gtccctccgtccaa 40508912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 12402985 - 12403061
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttatttt 84  Q
    |||| ||||||||||||| | |||||||||| ||||| | ||| ||||||||||||||||||| ||| |||||||||    
T  12402985 ggactcacttagtggtagaatccaccatctaatttttatatctatctctctccaacttgcaaaactctatttatttt 12403061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 35903828 - 35903914
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||| ||||||||||||| |   |||||| || ||| |||||||||||||  ||||||| | |||||||||||||||    
T  35903828 taatacctcaaatttgtccttgaattttgaaaaatcagccaatttcatccctgaattttgcaaaatatcaaattagtccctgaattt 35903914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 38191898 - 38191984
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||||||||||||||||||| |||||| |   ||  || || ||||||||||||||||| |||||||| | |||||||||||||||    
T  38191898 taatacctcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38191984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 46310522 - 46310436
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||| ||||||||| |   ||| |  || ||||||||||||||||| |||||||| | |||||||||||||||    
T  46310522 taatacctcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46310436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 46611389 - 46611303
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||  |  || ||||||||||||||||| |||||||| | |||||||||||||||    
T  46611389 taatacctcaaattcgtccttgaattttgaaaaatttgtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46611303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 566830 - 566746
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctatttttt-gtgtctttctctctccaacttgcaaatctccatttattttgccaaatg 92  Q
    ||||||||||| || ||||| || |||| |||||||| || ||| ||||||||||| ||||||| |||||||||||||||||||||    
T  566830 ggacccacttaatgataggatccgccatatatttttttgtatctatctctctccaaattgcaaa-ctccatttattttgccaaatg 566746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 31523724 - 31523663
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    |||||||||||||  ||||||||||||  |||||||||||||| ||||||||||| ||||||    
T  31523724 ggacccacttagtaataggacccaccacttattttttgtgtctatctctctccaaattgcaa 31523663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 488
Target Start/End: Complemental strand, 31887566 - 31887441
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||||||||||||||||||| |||| |  ||||||  || | |||| || |||||||| | |||||||||||||||  ||   ||| ||||||| |    
T  31887566 tcaaattcgtccttgaattttcacggatcggtcaaattcaaccatcaattatgcgaaatatcaacttagtccctgaatttgtcagatgtctatcaaaaag 31887467  T
Q  463 gtccttccgtccaaaagctccgttag 488  Q
    |||| |||||||||  ||||||||||    
T  31887466 gtccctccgtccaagtgctccgttag 31887441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 427 - 488
Target Start/End: Complemental strand, 44276266 - 44276205
Alignment:
Q  427 tttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||| |||||||||||  || ||||||||||||||| ||||||||||||||| |||||    
T  44276266 tttagtccttgaattttacagacgcccatcaaaatggtccctccgtccaaaagctctgttag 44276205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 488
Target Start/End: Complemental strand, 45257334 - 45257209
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||||| ||||||||||||| | || || |||||| ||||| |||| ||| ||||||| | ||||| |||||||||  ||  ||||||| ||||      
T  45257334 tcaaattcgttcttgaattttcacgggtcggccaaattcatccctcaattatgtaaaatatcaacttagttcctgaatttgtcagacgtccataaaaaat 45257235  T
Q  463 gtccttccgtccaaaagctccgttag 488  Q
    |||| |||||||||  ||||||||||    
T  45257234 gtccctccgtccaagtgctccgttag 45257209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 425 - 488
Target Start/End: Original strand, 5133068 - 5133131
Alignment:
Q  425 tatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||| |||| ||||||| |||  ||||||||||||| ||||||||||||||| ||||||||||    
T  5133068 tattttgtccttgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccgttag 5133131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 343 - 442
Target Start/End: Original strand, 7883318 - 7883417
Alignment:
Q  343 catatacattgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||| || || ||||||||||| |||||| ||||||||| |   ||| || || ||||||||| |||||||||||||||| | ||||| |||||||||    
T  7883318 catatatatcgactaatacctcaatttcgtctttgaattttgaaaaatcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaattt 7883417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 48635454 - 48635375
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| ||||||| ||||||||||| |||| |  |||||||||||| |||| || |||||||| ||||| |||||||||||    
T  48635454 tcaatttcgtccctgaattttcacggatcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 48635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 33632855 - 33632940
Alignment:
Q  22 gtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||||| |||| ||||||||| ||||||| ||||||||||| |||| |  ||||||||||| | ||||||||||| |||||| ||||    
T  33632855 gtaggatccactatctattttatgtgtctatctctctccaaattgc-atgctccatttattataccaaatggagaagatctttaccc 33632940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 42613099 - 42613160
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    |||||||||||||| ||||||||||||  |||||||| ||||| ||||||| ||| ||||||    
T  42613099 ggacccacttagtgataggacccaccacttattttttttgtctatctctcttcaaattgcaa 42613160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 49679326 - 49679265
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    ||||||| |||||| |||||||| |||  |||||||||||||| ||||||||||| ||||||    
T  49679326 ggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaaattgcaa 49679265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 431 - 488
Target Start/End: Original strand, 54092764 - 54092821
Alignment:
Q  431 gtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||||||| |||  ||||||||||||| ||||||||||||||| |||| |||||    
T  54092764 gtccctgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctctgttag 54092821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 488
Target Start/End: Original strand, 600804 - 600844
Alignment:
Q  448 tcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  600804 tcgtccatcaaaatggtccctccgtctaaaagctccgttag 600844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 1847726 - 1847647
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||||| |||||||||||||||| | || || |||||| ||||| |||| ||  ||||||| ||||| |||||||||||    
T  1847726 tcaaatttgtccttgaattttcacgggtcggccaaattcatccctcaattatgcaaaatatcaatttaatccctgaattt 1847647  T

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Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 23887208 - 23887287
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| |||||||||||||||| |  | || ||||| ||||||||| |||| || |||||||| ||||| |||||||||||    
T  23887208 tcaacttcgtccttgaatttttatgggtcggctaacttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 23887287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 29586356 - 29586454
Alignment:
Q  9 gacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||||||||| | ||| |||  || ||||||||| ||||||| |||||||||||  |||| | ||||||||||| ||| ||||| |||||||||| ||||    
T  29586356 gacccacttaatagtaagacttactatctattttatgtgtctatctctctccaaactgcata-ctccatttattatgctaaatgaagaggatctttaccc 29586454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 45897060 - 45897139
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| |||||||||||||||| || | || || || ||||||||| |||| || |||||||| ||||| |||||||||||    
T  45897060 tcaacttcgtccttgaatttttacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 45897139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 51454364 - 51454285
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||| |||| || |||||| | ||| |||| || |||||||| | ||||||  |||||||    
T  51454364 tcaaattcgtccttgaattttcacggatcggccaaattcattcctcaattatgcgaaatatcaaattagtctttgaattt 51454285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 414
Target Start/End: Complemental strand, 7884985 - 7884927
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaatttt 414  Q
    |||||||||||||||||||||||||||| |   ||| || |||| ||||||||||||||    
T  7884985 taatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttt 7884927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 473
Target Start/End: Complemental strand, 33113294 - 33113184
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    ||||||| ||||||||||||| || | || || ||| || ||||| |||| || |||||||| | ||||||||| |||||  ||  |||||||||||| |    
T  33113294 tcaaattagtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacgtccatcaaaaag 33113195  T
Q  463 gtccttccgtc 473  Q
    |||| ||||||    
T  33113194 gtccctccgtc 33113184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 54412593 - 54412547
Alignment:
Q  396 aaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||| ||||||||| || ||||||||||||| |||||||||    
T  54412593 aaattcgtccttgaattttgcgagatatctatttagttcctgaattt 54412547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 476
Target Start/End: Complemental strand, 24383007 - 24382894
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    ||||||| ||||||||||||| || | || || |||||| ||| | |||| || |||||||| | ||||||| || ||||  ||  |||||||||||| |    
T  24383007 tcaaattggtccttgaatttttacgggtcggccaaattcatccttcaattatgagaaatatcaacttagtccatggatttgtcagacgtccatcaaaaag 24382908  T
Q  463 gtccttccgtccaa 476  Q
    |||| |||||||||    
T  24382907 gtccctccgtccaa 24382894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 472
Target Start/End: Complemental strand, 41021117 - 41021008
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||||||| |||||||||||   || || ||||| |||||| |||| || ||||| || ||||  |||||||||||  ||  |||||||||||| |    
T  41021117 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaag 41021018  T
Q  463 gtccttccgt 472  Q
    |||| |||||    
T  41021017 gtccctccgt 41021008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 3009272 - 3009339
Alignment:
Q  40 tttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    ||||| ||||| ||||||||||| |||||| | ||||||||||||   |||||||||||||||| ||||    
T  3009272 tttttttgtctatctctctccaaattgcaact-tccatttatttttataaatggagaggatctttaccc 3009339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 436 - 488
Target Start/End: Original strand, 5125884 - 5125936
Alignment:
Q  436 tgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||| |||  ||||||||||||| ||||||| ||||||| ||||||||||    
T  5125884 tgaatttaacaaacgtccatcaaaatagtccttcggtccaaatgctccgttag 5125936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 436 - 488
Target Start/End: Original strand, 41623735 - 41623787
Alignment:
Q  436 tgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||| |||  ||||||||||||| |||||||||| |||| ||||||||||    
T  41623735 tgaatttaacaaacgtccatcaaaatagtccttccgttcaaatgctccgttag 41623787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 3e-43; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 19901974 - 19901873
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  19901974 ggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttcacc 19901875  T
Q  108 ca 109  Q
    ||    
T  19901874 ca 19901873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 56558298 - 56558398
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  56558298 ggacccacttagtgataggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacc 56558397  T
Q  108 c 108  Q
    |    
T  56558398 c 56558398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 3952225 - 3952125
Alignment:
Q  9 gacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  3952225 gacccacttagtggtaggacccaccatctattttttttgtctatctctctccaacttgccaaactccatttattttgccaaatggagaggatcttcaccc 3952126  T
Q  109 a 109  Q
    |    
T  3952125 a 3952125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 24073635 - 24073735
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  24073635 ggacccacttagtggtaggacccaccatctatttgttgtgtctatctctctccaacttacaaatctccatttattttgccaaatggggaggatcttcacc 24073734  T
Q  108 c 108  Q
    |    
T  24073735 c 24073735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 41761867 - 41761735
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||||||||||||||||||||||||||||   ||| || |||||||||||  ||||||| ||||||||||||||||||||||||||||||  |||||||    
T  41761867 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41761768  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||||| ||||||    
T  41761767 caaaatggtccctccgtccaaaagcttcgttag 41761735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 34778440 - 34778539
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34778440 ggacccacttagtggtaggatccaccatctattttttgtgtctatctctcttcaacttgcaaaactccatttattttgccaaatggagaggatcttcacc 34778539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 23610661 - 23610761
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||  |||||||||||||||||||||    
T  23610661 ggacccacttagtggtatgacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagaggatcttcacc 23610760  T
Q  108 c 108  Q
    |    
T  23610761 c 23610761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 33247184 - 33247086
Alignment:
Q  10 acccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    ||||| |||||||||| ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33247184 acccatttagtggtagaacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 33247086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 5416521 - 5416421
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  5416521 ggacccacttagtggtaggacccacaatctattttt-gtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacc 5416423  T
Q  108 ca 109  Q
    ||    
T  5416422 ca 5416421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 12312532 - 12312431
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgt-gtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcac 106  Q
    |||||||||||||||||||| |||||||||||||||| | |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12312532 ggacccacttagtggtaggatccaccatctatttttttttgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcac 12312433  T
Q  107 cc 108  Q
    ||    
T  12312432 cc 12312431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 18207096 - 18206995
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||| || ||||||||||| |||||||||||||||||||||    
T  18207096 ggacccacttagtggtaggacccaccatctattttttttgtctatctctctctaacttgcaaaactacatttattttgtcaaatggagaggatcttcacc 18206997  T
Q  108 ca 109  Q
    ||    
T  18206996 ca 18206995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 5763218 - 5763118
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||| ||||||||||||| |||||||||||||||    
T  5763218 ggacccacttagtggtaggacccaccatctattttttgtttctatctctctccaacttgtaaaactccatatattttgccaaattgagaggatcttcacc 5763119  T
Q  108 c 108  Q
    |    
T  5763118 c 5763118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 49523127 - 49523259
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||| ||||||||| |   ||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||  ||| |||    
T  49523127 taatacctcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttcat 49523226  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||  ||||||||    
T  49523227 caaaatggtccctccgtccaaaaaatccgttag 49523259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 30567922 - 30568008
Alignment:
Q  10 acccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggaga 96  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||    
T  30567922 acccacttagtggtaggacccaccatctattttttgtgtctatctctcttcaacttgcaaaactccatttattttgccaaatggaga 30568008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 12153185 - 12153273
Alignment:
Q  20 tggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12153185 tggtgggacccaccatctaatttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 12153273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 372 - 488
Target Start/End: Complemental strand, 48646852 - 48646736
Alignment:
Q  372 tccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccg 471  Q
    ||||||||||||||    |||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||  | | |||||||||||||||||||    
T  48646852 tccttgaattttcaaaagtcagctaaattcgtccttgaatttagcgaaatatctatttagtccctgaattttacagaccttcatcaaaatggtccttccg 48646753  T
Q  472 tccaaaagctccgttag 488  Q
    |||||||||| ||||||    
T  48646752 tccaaaagcttcgttag 48646736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 356 - 482
Target Start/End: Original strand, 48813790 - 48813916
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||||||||||||||||||||||||||||   |||||| |||||  |||||||||||||  |||||| |||||||| ||||||||||| |  |||||||    
T  48813790 taatacctcaaattcgtccttgaattttcaaaaatcagccaaatttatccctgaattttgcaaaatatatatttagttcctgaattttatagacgtccat 48813889  T
Q  456 caaaatggtccttccgtccaaaagctc 482  Q
    ||||||||||| | |||||||||||||    
T  48813890 caaaatggtcccttcgtccaaaagctc 48813916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 33262600 - 33262508
Alignment:
Q  16 ttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||||||||||| |||||||||||||||||||||| |||||||| |||||||||| | | |||||||||||||||| ||||||||||||||||    
T  33262600 ttagtggtaggatccaccatctattttttgtgtctatctctctctaacttgcaaaacacaatttattttgccaaatagagaggatcttcaccc 33262508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 35404566 - 35404434
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||| |||| | |||||||||| |   ||| ||||||||||||| | ||||||| ||||||| |||||| |||||||||||||||  ||||||     
T  35404566 taatacctcagattcatacttgaattttaaaaaatcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtccaa 35404467  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||||||||||||    
T  35404466 caaaatggtccatccgtccaaaagctccgttag 35404434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 38079772 - 38079676
Alignment:
Q  12 ccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||| |||| ||||| ||||||||||||||  |||||||||||||||||||||    
T  38079772 ccacttagtagtaggacccaccatctatttcttgtgtctatctctctcaaactagcaaaactccatttattttgttaaatggagaggatcttcaccc 38079676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 41781542 - 41781674
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||| || |||||||||| |   ||| |  ||||| ||||||||||||||  |||||| ||||||||||||||||||||||  | |||||    
T  41781542 taatacctcaaatttgttcttgaattttaaaaaatcggtcaaatttgtccctgaattttgcaaaatatttatttagtccctgaattttacagacatccat 41781641  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||||||||||||    
T  41781642 caaaatggtccctccgtccaaaagctccgttag 41781674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 51011929 - 51012061
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||| |||||||||||||||||||||| |   ||| |  |||||| | | ||||||||| ||||||||||||||||| ||||||||||||  |||||||    
T  51011929 taatatctcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattttacagacgtccat 51012028  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| ||||||||||||||| |||||    
T  51012029 caaaatggtccctccgtccaaaagctctgttag 51012061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 47922423 - 47922327
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctatt-ttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatctt 103  Q
    ||||||||||||||||||||||||||||||||| |||||||||| | ||||||||| ||||||| ||| |||||||||  |||||||||||||||||    
T  47922423 ggacccacttagtggtaggacccaccatctattcttttgtgtctatatctctccaaattgcaaaactcaatttattttagcaaatggagaggatctt 47922327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 35401747 - 35401838
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| |||||||||||||||||||||||||||| |   ||| || ||||||||||||||||||||||||||||||||||||||| |||||||    
T  35401747 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaattt 35401838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 356 - 479
Target Start/End: Original strand, 43519427 - 43519550
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||| |||||||| | |||||||||||||||||||  |||||||    
T  43519427 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtccat 43519526  T
Q  456 caaaatggtccttccgtccaaaag 479  Q
    ||||   |||| ||||||||||||    
T  43519527 caaatccgtccctccgtccaaaag 43519550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 33524313 - 33524382
Alignment:
Q  40 tttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccca 109  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33524313 tttttgtatctatctctctccaacttccaaatctccatttattttgccaaatggagaggatcttcaccca 33524382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 52018794 - 52018883
Alignment:
Q  20 tggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccca 109  Q
    |||| ||| |||| || |||||||||| ||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  52018794 tggtgggatccactatttattttttgtatctatctctctccaacttgcaaaactccatttattttgctaaatggagaggatcttcaccca 52018883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 39862544 - 39862636
Alignment:
Q  16 ttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||||| |||||| ||||||||||||||||||||| |||||||| ||||||||||  || |||||||||  ||||||||||||||||||||||    
T  39862544 ttagtgataggacacaccatctattttttgtgtctatctctctcaaacttgcaaaattctatttattttatcaaatggagaggatcttcaccc 39862636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 396 - 488
Target Start/End: Original strand, 42980678 - 42980770
Alignment:
Q  396 aaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||| |||| ||||||||  ||||| |||||||||||||| |||||||||  |||||||||||||||||| ||||||||||||||| |||||    
T  42980678 aaatttgtccatgaattttacgaaatttctatttagtcccttaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttag 42980770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 48645258 - 48645336
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtcc 434  Q
    ||||||||||||||||||||||||||||||   |||||  |||||||||| ||||||||| ||||||||||||||||||    
T  48645258 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccatgaattttgcgaaatatctatttagtcc 48645336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 363 - 476
Target Start/End: Complemental strand, 44558607 - 44558494
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||| ||||||||||||||||||| | || || |||||| ||||| |||| || |||||||| | |||||||||||||||  ||  |||||||||||| |    
T  44558607 tcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 44558508  T
Q  463 gtccttccgtccaa 476  Q
    ||||||||||||||    
T  44558507 gtccttccgtccaa 44558494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 488
Target Start/End: Complemental strand, 2693376 - 2693242
Alignment:
Q  353 gagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtc 452  Q
    |||||||||||||| |||||| ||||||||| |   |||||| |||||  | ||| ||||||| |||||||||||||||||  ||||||||| | | |||    
T  2693376 gagtaatacctcaacttcgtctttgaattttaaaaaatcagccaaatttattcctaaattttgcgaaatatctatttagtctttgaattttaaaat-gtc 2693278  T
Q  453 catcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||||||||| |||||||| ||| ||| ||||    
T  2693277 catcaaaatggtccatccgtccataagttccattag 2693242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 39345574 - 39345653
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||||||||||||||||||| |   ||| || |||||||||||||||||||| |||||| |||||||||||||||||||    
T  39345574 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaattt 39345653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 4173826 - 4173740
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||| |||||||| | |||||||||||||||    
T  4173826 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 4173740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 23474144 - 23474229
Alignment:
Q  22 gtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    ||||||||||||||||||||| ||||||| |||||| |||| ||||| | ||||||||||| ||| |||||||||||||||| ||||    
T  23474144 gtaggacccaccatctattttatgtgtctatctctccccaaattgcata-ctccatttattatgctaaatggagaggatctttaccc 23474229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 43507170 - 43507256
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||| |||||||| | |||||||||||||||    
T  43507170 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43507256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 43508739 - 43508653
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||| |||||||| | |||||||||||||||    
T  43508739 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43508653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 49524819 - 49524733
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| |  ||||||||||||||||||||  ||||| |||||||||||||||||||    
T  49524819 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaattt 49524733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 1871296 - 1871388
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatc 101  Q
    ||||||||||||| |||||| |||| |||||| |||| ||||| ||||||||||| ||||| | |||||||||||||| ||||| |||||||||    
T  1871296 ggacccacttagtagtaggatccactatctatattttttgtctatctctctccaaattgcata-ctccatttattttgtcaaattgagaggatc 1871388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 56269132 - 56269071
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||| ||||||    
T  56269132 ggacccacttagtggtaggacccaccacttattttttgtgtctatctctctccaaattgcaa 56269071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 488
Target Start/End: Original strand, 11601670 - 11601805
Alignment:
Q  352 tgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgt 451  Q
    |||||||||||| |||||||| ||||||||||||   |||||  |||||  ||||  |||||||  |||||| |||| |||||||||||||||||  |||    
T  11601670 tgagtaatacctaaaattcgttcttgaattttcaaaaatcagtcaaatttatccccaaattttgcaaaatatatatt-agtccctgaattttacagacgt 11601768  T
Q  452 ccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||||| |||| || ||||| ||||| ||||||    
T  11601769 ccatcaaaatagtccctctgtccacaagcttcgttag 11601805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 56453876 - 56453777
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||| || |||||||||||| ||||||||||||||| ||||||||||| |||||  | |||||||||||    |||||||||||||||| |||    
T  56453876 ggacccacttaatgataggacccaccacctattttttgtgtctatctctctccaaattgcatct-tccatttatttctataaatggagaggatcttaacc 56453778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 20493830 - 20493916
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||| ||||||||| |   ||| || |||||||| | ||||||||| |||||||||||||||| |||||||||    
T  20493830 taatacctcaaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaattt 20493916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 488
Target Start/End: Complemental strand, 52868230 - 52868138
Alignment:
Q  396 aaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||||  | ||||||| ||||||||||||||||| |||||||| |||  || | ||||||||||||  | |||||||||||||||||||    
T  52868230 aaattcgtctataaattttgcgaaatatctatttagtctctgaatttaacagacgcctatcaaaatggtcacttcgtccaaaagctccgttag 52868138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 33266096 - 33266010
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||| ||||||||||| |||||||||| |   ||| ||||| ||||| ||||||||||| |||||||| | |||||||||||||||    
T  33266096 taatatctcaaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaattt 33266010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 34927510 - 34927596
Alignment:
Q  14 acttagtggtaggacccaccatctatt-ttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagagga 99  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||  || ||||||| | |||||||||||   ||||||||||||    
T  34927510 acttaatggtaggacccaccatctattcttttgtgtctatctctctttaaattgcaaaaccccatttattttagtaaatggagagga 34927596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 48914572 - 48914475
Alignment:
Q  10 acccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    ||||||||  || |||||||||| ||||||||| ||||||  |||||||| || |||||  |||||||||||||||| ||||||||| |||||| ||||    
T  48914572 acccactttatgataggacccacaatctattttatgtgtcgatctctctctaaattgcat-tctccatttattttgctaaatggagaagatctttaccc 48914475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 47922129 - 47922035
Alignment:
Q  10 acccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    ||||||||||||||| ||||||| ||||||||||||||| | ||| |    ||||||||||  |||||||||||||||||||  | ||||| |||||||    
T  47922129 acccacttagtggtaagacccactatctattttttgtgtttatcttt----aacttgcaaaattccatttattttgccaaataaaaaggatattcaccc 47922035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 488
Target Start/End: Original strand, 35996106 - 35996198
Alignment:
Q  396 aaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||||||| |||| ||  ||||||| ||||| |||||||||||  ||  |||||||||||| ||||| |||||||||  ||||||||||    
T  35996106 aaattcgtccctcaattgtgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgtccaagtgctccgttag 35996198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 356 - 443
Target Start/End: Original strand, 2691377 - 2691463
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaatttt 443  Q
    ||||||||||| ||| || |||||||||||   |||||| ||||||||||   |||||||  ||||||||||||||||||||||||||    
T  2691377 taatacctcaacttcatc-ttgaattttcaaaaatcagccaaattcgtccacaaattttgcaaaatatctatttagtccctgaatttt 2691463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 356 - 443
Target Start/End: Original strand, 20819988 - 20820075
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaatttt 443  Q
    ||||||||||| ||||||||||||||||||   |||||  |||||  | ||| |||||||  |||||| |||||||||||||||||||    
T  20819988 taatacctcaacttcgtccttgaattttcaaaaatcagtcaaatttattcctaaattttgcaaaatatttatttagtccctgaatttt 20820075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 5524466 - 5524527
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    ||||||||||| || ||||||||||||  |||||||| ||||| ||||||||||| ||||||    
T  5524466 ggacccacttactgataggacccaccacttattttttatgtctatctctctccaaattgcaa 5524527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 472
Target Start/End: Complemental strand, 10372820 - 10372711
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||||||| |||||||||||   || || ||||| |||||| |||| || |||||||| ||||  |||||||||||  ||  |||||||||||| |    
T  10372820 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgtcagacgtccatcaaaaag 10372721  T
Q  463 gtccttccgt 472  Q
    |||| |||||    
T  10372720 gtccctccgt 10372711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 26428988 - 26429061
Alignment:
Q  9 gacccacttagtggtaggacccaccatctatt-ttttgtgtctttctctctccaacttgcaaatctccatttat 81  Q
    |||||| | ||||||||||| ||||||||||| |||||||||| ||| ||||||| ||||||| || |||||||    
T  26428988 gacccattcagtggtaggactcaccatctattcttttgtgtctatctttctccaaattgcaaaacttcatttat 26429061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 36688244 - 36688183
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    |||||||||||||| |||||| || ||  |||||||||||||| ||||||||||| ||||||    
T  36688244 ggacccacttagtgataggactcaacacttattttttgtgtctatctctctccaaattgcaa 36688183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 431 - 488
Target Start/End: Original strand, 44972489 - 44972546
Alignment:
Q  431 gtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||| ||||| |||  ||||||||||||| ||||||||||||||| ||||||||||    
T  44972489 gtccctaaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccgttag 44972546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 25442226 - 25442190
Alignment:
Q  12 ccacttagtggtaggacccaccatctattttttgtgt 48  Q
    ||||||||||||||||||||| |||||||||||||||    
T  25442226 ccacttagtggtaggacccacaatctattttttgtgt 25442190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 472
Target Start/End: Complemental strand, 44794841 - 44794765
Alignment:
Q  396 aaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgt 472  Q
    |||||||||||| |||| || |||||||| ||||| |||||||||||  ||  |||||||||||| ||||| |||||    
T  44794841 aaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 44794765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 439
Target Start/End: Complemental strand, 320986 - 320903
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaa 439  Q
    |||||||||||||||||||||||||||| |   ||| || || ||| ||| ||||||||| |||||||| | ||||||| ||||    
T  320986 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccttgaa 320903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 476
Target Start/End: Original strand, 2827452 - 2827527
Alignment:
Q  401 cgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaa 476  Q
    ||||||| |||| ||||||||||| | ||||||| |||||||  ||  |||||||||||| ||||| |||||||||    
T  2827452 cgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 2827527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 476
Target Start/End: Original strand, 7149539 - 7149662
Alignment:
Q  353 gagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtc 452  Q
    ||||||||| | |||||| ||||||||||||||   ||||||  ||||| ||  | ||||||| ||||||| |||||  ||| ||||||| |||   |||    
T  7149539 gagtaatacataaaattcatccttgaattttcaaaaatcagccgaattcatctttaaattttgcgaaatatttatttcatccttgaatttaacataggtc 7149638  T
Q  453 catcaaaatggtccttccgtccaa 476  Q
     ||||||||||||| |||||||||    
T  7149639 aatcaaaatggtccctccgtccaa 7149662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 17493025 - 17493083
Alignment:
Q  12 ccacttagtggtaggacccaccatctatttt-ttgtgtctttctctctccaacttgcaa 69  Q
    |||||||||| ||||||||||||  |||||| |||||||| ||||||||||| ||||||    
T  17493025 ccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 17493083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 5361457 - 5361506
Alignment:
Q  20 tggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    |||| ||||||||||  |||||||||||||| ||||||||||| ||||||    
T  5361457 tggtgggacccaccacttattttttgtgtctatctctctccaaattgcaa 5361506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 472
Target Start/End: Original strand, 10762591 - 10762700
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||||||| |||||||||||   || || ||||| |||||| |||| || ||||| || ||||  |||||||||||  ||  |||||||||||| |    
T  10762591 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaag 10762690  T
Q  463 gtccttccgt 472  Q
    |||| |||||    
T  10762691 gtccctccgt 10762700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 442
Target Start/End: Original strand, 11254123 - 11254208
Alignment:
Q  357 aatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||||||||||||||||||||||||| |   ||| || |||| |||| || ||||||| |||||| || ||| |||| |||||||    
T  11254123 aatacctcaaattcgtccttgaatttttaaaaatcggccaaatccgtctctaaattttgcgaaatagctcttttgtccttgaattt 11254208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 37002307 - 37002246
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    |||||||||||||  ||||| ||||||  |||||||||||||| ||||| ||||| ||||||    
T  37002307 ggacccacttagtaataggatccaccacttattttttgtgtctatctctttccaaattgcaa 37002246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 42010136 - 42010197
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    ||||||| |||||| |||||||| |||  |||||||||| ||| ||||||||||| ||||||    
T  42010136 ggacccatttagtgataggacccgccacttattttttgtatctatctctctccaaattgcaa 42010197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 442
Target Start/End: Original strand, 833220 - 833312
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||| |||||||||||| | ||||||||||||| |   ||| || || |||||||||||||| |  |||||||| |  ||||||||||||||    
T  833220 attgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 833312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 13493291 - 13493385
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctcc--aacttgcaaatctccatttattttgccaaatggagaggatc 101  Q
    |||| ||||||||||| ||| |||| |||||||||  |||||| ||||||||   || ||||| | |||||||||||||| ||||| |||||||||    
T  13493291 ggactcacttagtggtgggatccactatctattttacgtgtctatctctctctctaaattgcata-ctccatttattttgtcaaatagagaggatc 13493385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 472
Target Start/End: Original strand, 47941854 - 47941930
Alignment:
Q  396 aaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgt 472  Q
    ||||||||| || |||| || |||||||| ||||| |||||||||||  ||  |||||||||||| ||||| |||||    
T  47941854 aaattcgtctctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 47941930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 483
Target Start/End: Original strand, 50131240 - 50131292
Alignment:
Q  431 gtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctcc 483  Q
    |||||||||||| |||  ||||||||||||| ||| ||||||||||| |||||    
T  50131240 gtccctgaatttgacaaacgtccatcaaaatagtcattccgtccaaatgctcc 50131292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 3e-43; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 13238700 - 13238797
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttca 105  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13238700 ggacccacttggtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttca 13238797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 35316844 - 35316944
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35316844 ggacccacttagtggtaggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacc 35316943  T
Q  108 c 108  Q
    |    
T  35316944 c 35316944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 39664889 - 39664757
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| || ||||||||||| |||||||  ||||||||||||||||||||||||||||||  |||||||    
T  39664889 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttacagacgtccat 39664790  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||||||||||||    
T  39664789 caaaatggtccctccgtccaaaagctccgttag 39664757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 16763079 - 16763211
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| |  |||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  16763079 taatacctcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 16763178  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| ||||||||||| ||| |||||    
T  16763179 caaaatggtccctccgtccaaaatctctgttag 16763211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 17696209 - 17696341
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||||||||||||||||||||||||||||   ||| || |||||| |||||||||||||  |||||||||||||||||||||||||||||  |||| ||    
T  17696209 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttacaaacgtcaat 17696308  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||  |||||||||||||||||||||    
T  17696309 caaaatggtcactccgtccaaaagctccgttag 17696341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 28564911 - 28565011
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||  ||| ||||||||||||||||||||||||||||||||||||    
T  28564911 ggacccacttagtggtaggacccaccatctattttttgtgtctatctctctacaacttaaaaaactccatttattttgccaaatggagaggatcttcacc 28565010  T
Q  108 c 108  Q
    |    
T  28565011 c 28565011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 349 - 488
Target Start/End: Original strand, 40560219 - 40560358
Alignment:
Q  349 cattgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacact 448  Q
    |||||| |||||| ||||||||||| ||||||||| |   |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||      
T  40560219 cattgactaatacttcaaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaga 40560318  T
Q  449 cgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||||| |||| |||||||||||| || |||||    
T  40560319 cgtccatcaaaatagtccctccgtccaaaagttctgttag 40560358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 350 - 488
Target Start/End: Complemental strand, 44709892 - 44709754
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactc 449  Q
    ||||| |||||||||||||||||||||||||||| |   | | || ||||||| |||||||||||| |||||| |||||||||||||||||||||||  |    
T  44709892 attgactaatacctcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagac 44709793  T
Q  450 gtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  44709792 gtccatcaaaatggtccctccgtccaaaagcttcgttag 44709754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 14389225 - 14389093
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||| |||||||||||   ||| || |||||||||||||||||||| ||||||||||||||||||||||||||| ||   ||||||    
T  14389225 taatacctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtccat 14389126  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||| | ||||||    
T  14389125 caaaatggtccctccgtccaaaagtttcgttag 14389093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 23259539 - 23259443
Alignment:
Q  12 ccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23259539 ccacttagtagtaggacccaccagctattttttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatggagaggatcttcaccc 23259443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 19908388 - 19908255
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactga-tcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtcca 454  Q
    |||||||||||||||||||||||||||| |   | || || ||||| |||||||||||||| |||||||||||||||||| |||||||||||  |||||     
T  19908388 taatacctcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtccg 19908289  T
Q  455 tcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||||||| |||||||||||||||||||||    
T  19908288 tcaaaatggtccctccgtccaaaagctccgttag 19908255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 2766937 - 2767069
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||| |||||||||||||||||||||| |   ||| |  ||| |||||| ||||||||| ||||||||||||||||||||||||||||||  |||| ||    
T  2766937 taatagctcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtctat 2767036  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| || ||||||||||||||||||    
T  2767037 caaaatggtccctctgtccaaaagctccgttag 2767069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 396 - 488
Target Start/End: Complemental strand, 16377298 - 16377206
Alignment:
Q  396 aaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||| ||||||||||||||  ||||||||||||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||||||    
T  16377298 aaatttgtccctgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttag 16377206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 45625123 - 45625035
Alignment:
Q  20 tggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||| |||||||| || ||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  45625123 tggtgggacccacaatttatttcttgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcaccc 45625035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 393 - 487
Target Start/End: Original strand, 6797547 - 6797641
Alignment:
Q  393 gctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgtta 487  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| |||||||||  |||| ||||||||||| | ||||||||||||||| ||||    
T  6797547 gctaaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgtctatcaaaatggttcctccgtccaaaagctctgtta 6797641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 39455172 - 39455304
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||| |||||||| ||||||||||||| |   ||| | |||||||   |||||||||||  ||||||||||||||||| |||||||||||  |||||||    
T  39455172 taatatctcaaatttgtccttgaattttaaaaaatcggttaaattcagtcctgaattttgcaaaatatctatttagtccatgaattttacagacgtccat 39455271  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||  ||||| |||||||||||||||    
T  39455272 caaaatggtctctccgttcaaaagctccgttag 39455304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 357 - 488
Target Start/End: Complemental strand, 42519346 - 42519214
Alignment:
Q  357 aatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaatttt-gtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||||||||||||||||||||||||| |   ||     ||||| |||| |||||||| |  |||||||||||||||||||||||||||||  |||||||    
T  42519346 aatacctcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccat 42519247  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| ||| |||||||||||||||||    
T  42519246 caaaatggtccctccatccaaaagctccgttag 42519214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 11864913 - 11864988
Alignment:
Q  33 catctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||||||||||||||||| ||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||    
T  11864913 catctattttttgtgtctatctctctccaacttgtaaaactccatttattttgataaatggagaggatcttcaccc 11864988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 2063374 - 2063473
Alignment:
Q  10 acccacttagtggtaggaccca-ccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||||||| ||||||||||| | ||||||||||||||||||| ||||||||||| ||||||| ||| |||||||||| |||||| |||||||||| ||||    
T  2063374 acccacttggtggtaggaccaaaccatctattttttgtgtctatctctctccaaattgcaaa-ctctatttattttgtcaaatgaagaggatcttaaccc 2063472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 16764703 - 16764611
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||| |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||| |||||||| | |||||||||||||||    
T  16764703 attgactaatacctcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 16764611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 19581417 - 19581495
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtcc 434  Q
    ||||||||||||||||||||| |||||| |   |||||| ||||| |||||||||||||| ||||||||||||||||||    
T  19581417 taatacctcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtcc 19581495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 363 - 488
Target Start/End: Original strand, 17946104 - 17946229
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||| ||||||| ||||||| ||   |||||||||| |||||| | |||||||  ||||||| |||| ||||||||||||  | |  |||||||||||||    
T  17946104 tcaacttcgtccctgaatttgcaagcatcagctaaaatcgtccttaaattttgcaaaatatcaattttgtccctgaatttctctcatgtccatcaaaatg 17946203  T
Q  463 gtccttccgtccaaaagctccgttag 488  Q
    |||| |||||||||||| ||||||||    
T  17946204 gtccctccgtccaaaaggtccgttag 17946229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 16376734 - 16376825
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| |||||||||||||||||| ||||||||| |   ||| |  |||||||||||||||||||  |||||| |||||||||||||||||||    
T  16376734 ttgactaatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaattt 16376825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 356 - 435
Target Start/End: Original strand, 19906685 - 19906764
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccc 435  Q
    |||||||| ||||||||||||||||||| |   ||| |  |||||||||||||||||||| |||||||||||||||||||    
T  19906685 taataccttaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccc 19906764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 478
Target Start/End: Complemental strand, 6786122 - 6786000
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||| | ||||||||||||| |   ||| || || ||||||||| |||| | ||||||||| | |||||||||||||||||||  |||||||    
T  6786122 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtcccttaattatttgaaatatcaaattagtccctgaattttacagacgtccat 6786023  T
Q  456 caaaatggtccttccgtccaaaa 478  Q
    ||||   |||| |||||||||||    
T  6786022 caaatcagtccctccgtccaaaa 6786000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 14387352 - 14387438
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||  |||||||| | |||||||||||||||    
T  14387352 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 14387438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 34400317 - 34400403
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||||||||||||| ||||||||||||||   ||| || |||||| ||||||||||||| |||||| |||||| |||| |||||||    
T  34400317 taatacctcaaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaatagctattttgtccttgaattt 34400403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 39663157 - 39663243
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||| ||||||||||||||||||| |   ||| |  ||||||||||||||||||||  ||||| |||||||||||||||||||    
T  39663157 taatacctaaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaattt 39663243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 488
Target Start/End: Original strand, 37417287 - 37417408
Alignment:
Q  367 attcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtcc 466  Q
    |||||||||||||||||||  | || || |||||| ||||| |||| || |||||||| | |||||||||||||||  ||  |||||||||||| |||||    
T  37417287 attcgtccttgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtcc 37417386  T
Q  467 ttccgtccaaaagctccgttag 488  Q
     | |||||||  ||||||||||    
T  37417387 cttcgtccaagtgctccgttag 37417408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 40640706 - 40640783
Alignment:
Q  26 gacccaccatctatt-ttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatct 102  Q
    ||||||||||||||| |||||| | | ||||||||||| ||||||| |||||||||||||  ||||||||||||||||    
T  40640706 gacccaccatctattcttttgtatatatctctctccaaattgcaaaactccatttattttaacaaatggagaggatct 40640783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 351 - 443
Target Start/End: Complemental strand, 31475171 - 31475079
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaatttt 443  Q
    |||||||||||||||| ||||| ||| ||||||||   |||||  ||||||||| |  ||||||| |||||||||||||| ||||||||||||    
T  31475171 ttgagtaatacctcaacttcgttctttaattttcaaaaatcagtcaaattcgtcaccaaattttgagaaatatctatttaatccctgaatttt 31475079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 4446950 - 4446860
Alignment:
Q  10 acccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggat 100  Q
    ||||| |||||||||||| |||| ||||||||| ||||||| ||||||| ||| ||| | |  ||||||||||||  ||||||||||||||    
T  4446950 acccaattagtggtaggatccactatctattttatgtgtctatctctcttcaaattgtacacttccatttattttatcaaatggagaggat 4446860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 478
Target Start/End: Complemental strand, 24208183 - 24208061
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||| |  |||||||||||| |   ||| || || |||||||||||||| |  |||||||| | |||||||||||||||||||  |||||||    
T  24208183 taatacctcaaaatactccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtccat 24208084  T
Q  456 caaaatggtccttccgtccaaaa 478  Q
    ||||   |||| |||||||||||    
T  24208083 caaatcagtccctccgtccaaaa 24208061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 353 - 487
Target Start/End: Original strand, 37645487 - 37645621
Alignment:
Q  353 gagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtc 452  Q
    |||||||||| ||| |||||||||||||||| |   |||||   ||||||||| | ||||||  |||||||||||||||||| |||||||| ||   ||     
T  37645487 gagtaataccccaacttcgtccttgaatttttaaaaatcagtcgaattcgtccttaaattttaggaaatatctatttagtccttgaattttgcagatgtt 37645586  T
Q  453 catcaaaatggtccttccgtccaaaagctccgtta 487  Q
     |||||||| |||| |||||||| |||||| ||||    
T  37645587 tatcaaaattgtccctccgtccataagctctgtta 37645621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 40561964 - 40561878
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||| ||||||||| |   ||| || || |||||| ||||||||||||||||| | | |||||||||||||||    
T  40561964 taatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaattt 40561878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 375012 - 375073
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    |||||||||||||  ||||||||||||  |||||||||||||| ||||||||||| ||||||    
T  375012 ggacccacttagtaataggacccaccacttattttttgtgtctatctctctccaaattgcaa 375073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 35315520 - 35315620
Alignment:
Q  7 aggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcac 106  Q
    ||||| |||||| || |||||||||||| ||||| ||||||| | ||||||||||| |||||  | ||||||||||||   |||||||||||||||| ||    
T  35315520 aggactcacttaatgataggacccaccacctattgtttgtgtttatctctctccaaattgcatct-tccatttatttttataaatggagaggatcttaac 35315618  T
Q  107 cc 108  Q
    ||    
T  35315619 cc 35315620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 36929747 - 36929823
Alignment:
Q  20 tggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagag 97  Q
    ||||||||| ||| | ||||||| ||||||| ||||||||||| ||||| | ||||||||||||||| ||||||||||    
T  36929747 tggtaggacacactacctattttatgtgtctatctctctccaaattgcata-ctccatttattttgctaaatggagag 36929823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 41223 - 41144
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| ||||||| ||||||||||| | || || |||||||||||| |||| || |||||||| ||||| |||||||||||    
T  41223 tcaacttcgtccctgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 409 - 488
Target Start/End: Original strand, 7744099 - 7744178
Alignment:
Q  409 aattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||| |||||||| |||| ||||||||||||  | |  ||||||||||||||||| ||| |||||||| ||||||||    
T  7744099 aattttgcgaaatatcaatttcgtccctgaatttctctcatgtccatcaaaatggtccctccatccaaaaggtccgttag 7744178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 36758902 - 36758816
Alignment:
Q  23 taggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacccag 110  Q
    ||||| ||||||  || ||||||||||| ||||||||||| |||||| | ||||||||||||   |||||||||||||||| ||||||    
T  36758902 taggatccaccacttactttttgtgtctatctctctccaaattgcaact-tccatttatttttataaatggagaggatctttacccag 36758816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 356 - 487
Target Start/End: Original strand, 37020511 - 37020642
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||| | ||||||||||||| |   ||| |  || || |||| |||||||| ||||||||| | |||||||||||||||| ||  |||||||    
T  37020511 taatacctcaaaatagtccttgaattttgaaaaatcggtcaattttgtccttgaattttttgaaatatcaaattagtccctgaattttgcagacgtccat 37020610  T
Q  456 caaaatggtccttccgtccaaaagctccgtta 487  Q
    ||||   |||| |||||||||||  |||||||    
T  37020611 caaatcagtccctccgtccaaaatgtccgtta 37020642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 2577566 - 2577480
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||| | ||||||||||||| |   |||  | || |||||||||||||||| ||||||||| | |||||||||||||||    
T  2577566 taatacctcaaaatagtccttgaattttgaaaaatcgtccaatttcgtccctgaattttttgaaatatcaaattagtccctgaattt 2577480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 15709789 - 15709874
Alignment:
Q  10 acccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggaga 96  Q
    ||||||||| |||||||| |||| ||||||||| | ||| | ||||||||||| ||||| || |||||||||||||| |||| ||||    
T  15709789 acccacttaatggtaggatccactatctattttatatgtttatctctctccaaattgcatat-tccatttattttgctaaatcgaga 15709874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 442
Target Start/End: Original strand, 24205601 - 24205687
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||| | ||||||||||||| |   ||| || || ||||||||||||||||  |||||||| | |||||||||||||||    
T  24205601 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 24205687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 30709133 - 30709183
Alignment:
Q  12 ccacttagtggtaggacccaccatctattttttgtgtctttctctctccaa 62  Q
    ||||||||||||||||||||  ||||||||| ||||||| |||||||||||    
T  30709133 ccacttagtggtaggacccaatatctattttatgtgtctatctctctccaa 30709183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 443
Target Start/End: Complemental strand, 37646567 - 37646477
Alignment:
Q  353 gagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaatttt 443  Q
    |||||||||| ||| ||||| |||||| |||||   |||||  ||||||||||   |||| || |||||||||||||||||||||||||||    
T  37646567 gagtaataccccaacttcgttcttgaactttcaaaaatcagtcaaattcgtcctcaaattctgcgaaatatctatttagtccctgaatttt 37646477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 39456866 - 39456780
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||| |||||||| |||||||||||| |   ||  | ||||||||||| |||||||||  ||||| |||||||||||||||||||    
T  39456866 taatacttcaaattcatccttgaattttaaaaaattggttaaattcgtccatgaattttgcaaaatagctatttagtccctgaattt 39456780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 431 - 484
Target Start/End: Complemental strand, 62866 - 62813
Alignment:
Q  431 gtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccg 484  Q
    |||||||||||| |||  ||||||||||||| ||||||||||||||| ||||||    
T  62866 gtccctgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccg 62813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 8988874 - 8988935
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    |||||||||||||| ||||||| | ||  |||||||||||||| ||||||||||| ||||||    
T  8988874 ggacccacttagtgataggacctatcacttattttttgtgtctatctctctccaaattgcaa 8988935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 23459902 - 23459841
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    ||||||| |||||| |||||||| |||  |||||||||||||| ||||||||||| ||||||    
T  23459902 ggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaaattgcaa 23459841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 476
Target Start/End: Complemental strand, 29909774 - 29909661
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    ||||||| |||| |||||||||||   || || || || |||||| |||| || |||||||| ||||||||||| |||||  ||  |||||||||||| |    
T  29909774 tcaaatttgtccctgaattttcacgcgtcggccaactttgtccctcaattatgcgaaatatcaatttagtcccttaatttgtcagacgtccatcaaaaag 29909675  T
Q  463 gtccttccgtccaa 476  Q
    |||| |||||||||    
T  29909674 gtccctccgtccaa 29909661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 38824061 - 38824145
Alignment:
Q  25 ggacccaccatctatt-ttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    ||||||||||| |||| |||| ||||| ||||||||||| || |||| |||||||||||||  ||||| |||| |||||| ||||    
T  38824061 ggacccaccatttattcttttttgtctatctctctccaaattacaaaactccatttattttagcaaatagagatgatcttaaccc 38824145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 33203 - 33282
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| ||||||| ||||||||||| | || || || ||||||| | |||| ||||||||||| ||||| |||||||||||    
T  33203 tcaacttcgtccctgaattttcacgggtcggccaacttcgtccttcaattatgtgaaatatcaatttaatccctgaattt 33282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 11021543 - 11021622
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| ||||||| ||||||||||| | || || || ||||||||| |||| || |||||||| ||||| |||||||||||    
T  11021543 tcaacttcgtccctgaattttcacgggtcggccaacttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 11021622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 13780521 - 13780579
Alignment:
Q  12 ccacttagtggtaggacccaccatctatttt-ttgtgtctttctctctccaacttgcaa 69  Q
    |||||||||| ||||||||||||  |||||| |||||||| ||||||||||| ||||||    
T  13780521 ccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 13780579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 21454548 - 21454476
Alignment:
Q  10 acccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttatttt 84  Q
    ||||||||| ||||| ||||||| |||||||||| |||||| |||||||| || || |||| |||||||||||||    
T  21454548 acccacttaatggtatgacccacaatctattttt-gtgtctatctctctctaaattacaaa-ctccatttatttt 21454476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 476
Target Start/End: Original strand, 39574 - 39679
Alignment:
Q  371 gtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttcc 470  Q
    |||| |||||||| || | || || |||||||||||| |||| || |||||||| ||||| |||||||||||  ||  |||| || |||| ||||| |||    
T  39574 gtccctgaatttttacgggtcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcaggcgtcgattaaaaaggtccctcc 39673  T
Q  471 gtccaa 476  Q
    ||||||    
T  39674 gtccaa 39679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 472
Target Start/End: Original strand, 15372517 - 15372618
Alignment:
Q  371 gtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttcc 470  Q
    |||| ||||||||||| | || || ||||||| |||| |||| ||  ||||||| ||||| |||||||||||  ||  |||||||||||| ||||| |||    
T  15372517 gtccctgaattttcacgggtcggccaaattcgcccctcaattatgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctcc 15372616  T
Q  471 gt 472  Q
    ||    
T  15372617 gt 15372618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 105
Target Start/End: Complemental strand, 32009967 - 32009934
Alignment:
Q  72 ctccatttattttgccaaatggagaggatcttca 105  Q
    |||||||||||||| |||||||||||||||||||    
T  32009967 ctccatttattttgtcaaatggagaggatcttca 32009934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 373202 - 373127
Alignment:
Q  26 gacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatct 102  Q
    ||||||||| ||||||||||||||| ||| | ||  | |||||| ||||||||||||||   |||||||||||||||    
T  373202 gacccaccacctattttttgtgtctatctttttcataattgcaa-tctccatttatttttataaatggagaggatct 373127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 459
Target Start/End: Original strand, 4046334 - 4046402
Alignment:
Q  391 cagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaa 459  Q
    |||||||||||||  || |||||| ||||||||| | |||||| || ||||| ||| ||||||||||||    
T  4046334 cagctaaattcgtagctcaattttttgaaatatcaaattagtctctaaatttaacagtcgtccatcaaa 4046402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 436 - 488
Target Start/End: Original strand, 13999890 - 13999942
Alignment:
Q  436 tgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||| |||  ||||||||||||| ||||||||||||||| ||||| ||||    
T  13999890 tgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccattag 13999942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 488
Target Start/End: Complemental strand, 15807968 - 15807908
Alignment:
Q  428 ttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||||||| |||  |||| |||||| | ||||||||||||||| || |||||||    
T  15807968 ttagtccctgaatttaacaaacgtcaatcaaattagtccttccgtccaaatgcaccgttag 15807908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 19908799 - 19908897
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||||||||||   ||||||| ||| ||||||||| ||||||| |||| |||||| ||||| | ||||||||||| |  |||||| |||||||||| |||    
T  19908799 ggacccacttaaaagtaggactcactatctattttatgtgtctatctc-ctccaaattgcata-ctccatttattatatcaaatgaagaggatctttacc 19908896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 488
Target Start/End: Complemental strand, 32608116 - 32608056
Alignment:
Q  428 ttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||||||| |||  |||| |||||| | ||||||||||||||| || |||||||    
T  32608116 ttagtccctgaatttaacaaacgtcaatcaaattagtccttccgtccaaatgcaccgttag 32608056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 38397100 - 38397199
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||| |||||| | |||| |||||| ||||||||| | ||||| ||||||| ||| ||||| | |||| |||||| | | |||||||||||||||| |||    
T  38397100 ggactcacttaatagtagcacccactatctattttatttgtctatctctcttcaaattgcata-ctccgtttattatacaaaatggagaggatctttacc 38397198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 472
Target Start/End: Original strand, 41706562 - 41706658
Alignment:
Q  376 tgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgt 472  Q
    ||||||||||| | || |  |||||||||||| |||| || |||||||| ||||| |||||||||||  |   |||||||||||| ||||| |||||    
T  41706562 tgaattttcacgggtcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcgaacgtccatcaaaaaggtccctccgt 41706658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 383
Target Start/End: Original strand, 42517556 - 42517588
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaatttt 383  Q
    |||| ||||||||||||||||||||||||||||    
T  42517556 ttgactaatacctcaaattcgtccttgaatttt 42517588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 208082 - 208182
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  208082 ggacccacttagtggtaggacccaccatctattttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacc 208181  T
Q  108 c 108  Q
    |    
T  208182 c 208182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 1e-42; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 4804467 - 4804567
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  4804467 ggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcacc 4804566  T
Q  108 c 108  Q
    |    
T  4804567 c 4804567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 13089802 - 13089705
Alignment:
Q  11 cccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  13089802 cccacttagtggtaggacccaccatctatattttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatggagaggatcttcaccc 13089705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 12412658 - 12412756
Alignment:
Q  10 acccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||    
T  12412658 acccacttagtggtaggacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaagatctttaccc 12412756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 1249202 - 1249105
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||||||||||||||||||||||||||||||||||||||  || |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  1249202 ggacccacttagtggtaggacccaccatctattttttgt--ctgtctctctccaacttacaaaactccatttattttgccaaatggagaggatcttcacc 1249105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 6899488 - 6899620
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||| |||||||||||||||   |||||  ||||||||| || |||||||||||||||||||||||||||| |||||||||  | |||||    
T  6899488 taatacctcaaatttgtccttgaattttcaaaaatcagtcaaattcgtctctaaattttgtgaaatatctatttagtccctaaattttacagacatccat 6899587  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| | |||||||||||||||||||    
T  6899588 caaaatggtcccttcgtccaaaagctccgttag 6899620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 17944181 - 17944281
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||    
T  17944181 ggacccatttagtggtaggacctaccatctattttttgtgtctatctctctccaacttacaaaactccatttattttgccaaatgaagaggatcttcacc 17944280  T
Q  108 c 108  Q
    |    
T  17944281 c 17944281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 21159425 - 21159325
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| || ||||||||||  |||||||||||||||||||||    
T  21159425 ggacccacttagtggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaaacttcatttattttaacaaatggagaggatcttcacc 21159326  T
Q  108 c 108  Q
    |    
T  21159325 c 21159325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 27826557 - 27826654
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttca 105  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||| || ||||||| ||||||||||||||||||||    
T  27826557 ggacccacttagtggtaggacccaccatctattttttgtgtctatctctctcaaccttgcaaatcttcagttattttaccaaatggagaggatcttca 27826654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 7162103 - 7162203
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    ||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||  |||||||||| ||||||||||    
T  7162103 ggacccacttagtagtaggacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagatgatcttcacc 7162202  T
Q  108 c 108  Q
    |    
T  7162203 c 7162203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 32439212 - 32439080
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||| ||| ||||||||| |   ||| |  |||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  32439212 taatacctcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 32439113  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||| || |||||    
T  32439112 caaaatggtccctccgtccaaaagatctgttag 32439080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 357 - 488
Target Start/End: Original strand, 10568403 - 10568534
Alignment:
Q  357 aatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatc 456  Q
    ||||| |||||||||||||||||||||||   |||||  |||||||||| ||||||| | ||||||| ||||||||||||||||||||||  |||| |||    
T  10568403 aatacatcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtccctgaattttacagacgtctatc 10568502  T
Q  457 aaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||| |||| |||||||||||||||||||||    
T  10568503 aaaatagtccctccgtccaaaagctccgttag 10568534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 396 - 488
Target Start/End: Complemental strand, 7373039 - 7372947
Alignment:
Q  396 aaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||| ||||    
T  7373039 aaattcgtccctgaattttgcgaaatatttatttagtccctgaattttacaggcgtccatcaaaatggtccctccgtccaaaagctccattag 7372947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 20523369 - 20523501
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||| |||||||| |||| |||||||||   ||| |  |||||||||| ||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  20523369 taatacatcaaattcttcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 20523468  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||| || |||||    
T  20523469 caaaatggtccctccgtccaaaagttctgttag 20523501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 32737895 - 32737977
Alignment:
Q  27 acccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccca 109  Q
    |||||||||||||||||||||||| |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||    
T  32737895 acccaccatctattttttgtgtctatctctctccaacctgcaaaactctatttattttgccaaatggagaggatcttcaccca 32737977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 351 - 488
Target Start/End: Original strand, 32516875 - 32517012
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcg 450  Q
    |||| |||||||||||||||||||||||||||| |   ||| |  |||||||||||||||||||   ||||| |||||||| || |||||||||||  ||    
T  32516875 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacatacg 32516974  T
Q  451 tccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  32516975 tccatcaaaattgtccctccgtccaaaagctccgttag 32517012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 356 - 484
Target Start/End: Original strand, 11355225 - 11355353
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||| |  ||||||||| ||||||||| ||||||||||||| | |||||||||||||||  || |||     
T  11355225 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggccac 11355324  T
Q  456 caaaatggtccttccgtccaaaagctccg 484  Q
    ||||||||||| |||||||||||||||||    
T  11355325 caaaatggtccctccgtccaaaagctccg 11355353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 227616 - 227522
Alignment:
Q  12 ccacttagtggtaggacccaccatctatt-ttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttca 105  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||  |||||| |||||||||||||  |||||||||||||||||||    
T  227616 ccacttagtggtaggacccaccatctattcttttgtgtctatctctctccaaaatgcaaaactccatttattttagcaaatggagaggatcttca 227522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 356 - 488
Target Start/End: Complemental strand, 13613703 - 13613571
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||| ||||||||||||||||||| |   ||| |  |||||||||||||||||||| |||||||| | |||||||||||||||||||  |||||||    
T  13613703 taataccttaaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccat 13613604  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    |||| | |||| |||||||||||| ||| ||||    
T  13613603 caaattagtccctccgtccaaaaggtccattag 13613571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 406 - 488
Target Start/End: Original strand, 9398713 - 9398795
Alignment:
Q  406 ctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||||| |||||||||||||||||||||||||||| |  ||| |||||||||||||| |||||||||||| ||||||||    
T  9398713 ctgaattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttag 9398795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 1516250 - 1516163
Alignment:
Q  20 tggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||| ||| |||||||||||||||||| ||  ||||||||||| ||||||| ||||||||||||||||||||||| |||||||| ||||    
T  1516250 tggtgggatccaccatctattttttgtatccatctctctccaaattgcaaa-ctccatttattttgccaaatggataggatcttaaccc 1516163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 1518339 - 1518252
Alignment:
Q  20 tggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||| ||| |||||||||||||||||| ||  ||||||||||| ||||||| ||||||||||||||||||||||| |||||||| ||||    
T  1518339 tggtgggatccaccatctattttttgtatccatctctctccaaattgcaaa-ctccatttattttgccaaatggataggatcttaaccc 1518252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 368 - 487
Target Start/End: Complemental strand, 14338584 - 14338465
Alignment:
Q  368 ttcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtcct 467  Q
    |||||||||||||||| |   |||||| ||||||||||   ||||||| ||||| |||| ||  ||||||||||| |||  ||||||||||||||||||     
T  14338584 ttcgtccttgaatttttaaaaatcagccaaattcgtcctcaaattttgcgaaatgtctaattcatccctgaatttcacagacgtccatcaaaatggtccc 14338485  T
Q  468 tccgtccaaaagctccgtta 487  Q
    ||||| ||||||||||||||    
T  14338484 tccgttcaaaagctccgtta 14338465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 434
Target Start/End: Complemental strand, 10570005 - 10569927
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtcc 434  Q
    |||||||||||||||||||||||||||| |   |||||| |||||||||| |||||||||  |||||||||||||||||    
T  10570005 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagtcc 10569927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 7215908 - 7215816
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggat 100  Q
    ||||||| ||||||||||||||||| ||||||||| ||||||| ||||||||||| |||   |  ||||||||||||  ||||||||||||||    
T  7215908 ggacccaattagtggtaggacccactatctattttatgtgtctatctctctccaaattgtgcacttccatttattttatcaaatggagaggat 7215816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 431 - 486
Target Start/End: Original strand, 7049835 - 7049890
Alignment:
Q  431 gtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgtt 486  Q
    ||||||||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  7049835 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgtt 7049890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 434
Target Start/End: Complemental strand, 6902983 - 6902906
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtcc 434  Q
    ||||||||||||||||||||||||||||||   |||||  |||||||||||| ||||||| | ||||||||||||||||    
T  6902983 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccctaaattttgcg-aatatctatttagtcc 6902906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 9400121 - 9400035
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   |||||  |||||| ||| ||||||||| |||||||||| |||||||| ||||||    
T  9400121 taatacctcaaattcgtccttgaattttgaaaaatcagtcaaattcatccttgaattttgcgaaatatctaattagtccccgaattt 9400035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 13888579 - 13888477
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctatt-ttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcac 106  Q
    ||||||| ||| |||||||| |||||||||||| |||||||| | ||||||||||| ||||||| ||| |||||||||  || || ||||||||||| ||    
T  13888579 ggacccagttaatggtaggaaccaccatctattattttgtgtatatctctctccaaattgcaaaactctatttattttagcatattgagaggatcttaac 13888480  T
Q  107 cca 109  Q
    |||    
T  13888479 cca 13888477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 32518583 - 32518497
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||||||||||||||||||| |   ||| || || ||| ||||||||||||| |||||||| | |||||||||||||||    
T  32518583 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 32518497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 434
Target Start/End: Original strand, 21068625 - 21068706
Alignment:
Q  353 gagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtcc 434  Q
    |||||||||||||||||||||||||||||||||   |||||  ||||||||||   ||||||  ||||||||||||||||||    
T  21068625 gagtaatacctcaaattcgtccttgaattttcaacaatcagtcaaattcgtccacaaattttacgaaatatctatttagtcc 21068706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 24484898 - 24484959
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    |||||||||||||| ||||||||||||  |||||||||||||| ||||||||||| ||||||    
T  24484898 ggacccacttagtgataggacccaccacttattttttgtgtctatctctctccaaattgcaa 24484959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 1515576 - 1515497
Alignment:
Q  29 ccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccca 109  Q
    |||||||||||||||| | ||  ||||||||||| ||||||| |||||||||||||||||||| || |||||||| |||||    
T  1515576 ccaccatctattttttttatccatctctctccaaattgcaaa-ctccatttattttgccaaattgataggatcttaaccca 1515497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 7371173 - 7371264
Alignment:
Q  351 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||| ||||||||||| ||||||||||||||||||   ||| || ||||| |||||||||||||| ||||||  ||||| |||| |||||||    
T  7371173 ttgactaatacctcaacttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaatagatattttgtccttgaattt 7371264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 415
Target Start/End: Complemental strand, 8605411 - 8605352
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttg 415  Q
    ||||||||||||||||||||||||||||||   |||||| |||||||||||| |||||||    
T  8605411 taatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctaaattttg 8605352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 11357280 - 11357194
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||| ||||||||||||||||||||| |   ||| |  ||||||||||||||||||||  ||||| | |||||||||||||||||    
T  11357280 taatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaattt 11357194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 2800667 - 2800574
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatc 101  Q
    ||||||||||| ||||| || |||| ||||||||| ||||||| ||||||||||| |||   || |||||| |||||  |||||||||||||||    
T  2800667 ggacccacttaatggtatgatccactatctattttatgtgtctatctctctccaaattgtgtatttccattaattttatcaaatggagaggatc 2800574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 472
Target Start/End: Original strand, 4641373 - 4641474
Alignment:
Q  371 gtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttcc 470  Q
    |||| ||||||||||| | || || |||||||||||| |||| ||||||||||| ||||| |||||||||||  ||  | |||||||||| ||||| |||    
T  4641373 gtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctccatcaaaaaggtccctcc 4641472  T
Q  471 gt 472  Q
    ||    
T  4641473 gt 4641474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 488
Target Start/End: Complemental strand, 3018541 - 3018421
Alignment:
Q  368 ttcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtcct 467  Q
    ||||||| |||||||||||   || || || ||||||||| |||| || |||||||| | |||||||||||||||  ||  |||||||||||| |||||     
T  3018541 ttcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccc 3018442  T
Q  468 tccgtccaaaagctccgttag 488  Q
    ||| |||||  ||||||||||    
T  3018441 tccatccaagtgctccgttag 3018421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 487
Target Start/End: Original strand, 3456794 - 3456882
Alignment:
Q  399 ttcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgtta 487  Q
    ||||||||||||||||  |||||||| | |||||||||||||||| ||  |||||||||||   |||| |||||||||||  |||||||    
T  3456794 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatatccgtta 3456882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 356 - 487
Target Start/End: Complemental strand, 32456012 - 32455881
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||| | ||||||||||||| |   ||| |  || ||||||||||||||||  |||||||| | |||||| ||||||||| ||  |||||||    
T  32456012 taatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtcactgaattttgcagacgtccat 32455913  T
Q  456 caaaatggtccttccgtccaaaagctccgtta 487  Q
    ||||   |||| |||||||||||  |||||||    
T  32455912 caaatcagtccctccgtccaaaatgtccgtta 32455881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 357 - 414
Target Start/End: Original strand, 7049790 - 7049847
Alignment:
Q  357 aatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaatttt 414  Q
    |||| ||||||||| ||||||||||||||   |||||| |||||||||||||||||||    
T  7049790 aatatctcaaattcttccttgaattttcaaaaatcagccaaattcgtccctgaatttt 7049847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 17828620 - 17828524
Alignment:
Q  12 ccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccca 109  Q
    ||||||| | |||| | |||| ||||||||| ||||||| ||||||||||| ||||| | ||||| ||||| | ||||||| |||||||||| |||||    
T  17828620 ccacttaatagtagaatccactatctattttatgtgtctatctctctccaaattgcata-ctccaattattataccaaatgtagaggatctttaccca 17828524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 28696680 - 28696624
Alignment:
Q  39 ttttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggaga 96  Q
    |||||| ||||| ||||||||||| ||||||| ||| |||||||||||||||||||||    
T  28696680 ttttttttgtctatctctctccaaattgcaaa-ctcaatttattttgccaaatggaga 28696624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 472
Target Start/End: Original strand, 2968182 - 2968258
Alignment:
Q  396 aaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgt 472  Q
    |||||||||||| |||| || |||||||| ||||| |||||||||||  ||  |||||||||||| ||||| |||||    
T  2968182 aaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccatccgt 2968258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 385
Target Start/End: Original strand, 21091106 - 21091138
Alignment:
Q  353 gagtaatacctcaaattcgtccttgaattttca 385  Q
    |||||||||||||||||||||||||||||||||    
T  21091106 gagtaatacctcaaattcgtccttgaattttca 21091138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 30460875 - 30460930
Alignment:
Q  40 tttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggaga 96  Q
    ||||||||||| ||| ||||||| ||||||| |||||||||||||| ||||||||||    
T  30460875 tttttgtgtctatctttctccaaattgcaaa-ctccatttattttgtcaaatggaga 30460930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 442
Target Start/End: Original strand, 32454238 - 32454337
Alignment:
Q  343 catatacattgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||| | ||| |||||||||||| | ||||||||||||| |   ||| || || ||||||| ||||||||  |||||||| | |||||||||||||||    
T  32454238 catatataatgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaattt 32454337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 3480743 - 3480657
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||||||||| | ||||||||||||| |   ||| || || ||||||||||||||||  |||||||| |  ||||||||||||||    
T  3480743 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaattt 3480657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 7545660 - 7545718
Alignment:
Q  12 ccacttagtggtaggacccaccatctatttttt-gtgtctttctctctccaacttgcaa 69  Q
    |||||||||| ||||||||||||  |||||||| |||||| ||||||||||| ||||||    
T  7545660 ccacttagtgataggacccaccacttattttttggtgtctatctctctccaaattgcaa 7545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 29698182 - 29698220
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgt 46  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  29698182 ggacccacttaatggtaggatccaccatctattttttgt 29698220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 472
Target Start/End: Original strand, 29077338 - 29077447
Alignment:
Q  363 tcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatg 462  Q
    |||||||||||| |||||||||||   || || ||||| |||||| |||| || ||||| || ||||  |||||||||||  ||  |||||||||||| |    
T  29077338 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaag 29077437  T
Q  463 gtccttccgt 472  Q
    |||| |||||    
T  29077438 gtccctccgt 29077447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 2142332 - 2142288
Alignment:
Q  25 ggacccaccatctattttttgtgtctttctctctccaacttgcaa 69  Q
    ||||||||||  |||||||||||||| ||||||||||| ||||||    
T  2142332 ggacccaccacttattttttgtgtctatctctctccaaattgcaa 2142288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 432
Target Start/End: Complemental strand, 7051291 - 7051255
Alignment:
Q  396 aaattcgtccctgaattttgtgaaatatctatttagt 432  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  7051291 aaattcgtctctgaattttgcgaaatatctatttagt 7051255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 488
Target Start/End: Original strand, 11163875 - 11163935
Alignment:
Q  428 ttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||||||| |||  |||| |||||| | ||||||||||||||| || |||||||    
T  11163875 ttagtccctgaatttaacaaacgtcaatcaaattagtccttccgtccaaatgcaccgttag 11163935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 432 - 488
Target Start/End: Complemental strand, 25172154 - 25172098
Alignment:
Q  432 tccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||  ||||||| ||||| ||||||||||||||| ||||| ||||    
T  25172154 tccctgaatttaacaaacgtccataaaaatagtccttccgtccaaatgctccattag 25172098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 29229149 - 29229204
Alignment:
Q  44 tgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggat 100  Q
    ||||||| ||||||||||| ||||| | ||||||||||| | |||||||||||||||    
T  29229149 tgtgtctatctctctccaaattgcata-ctccatttattataccaaatggagaggat 29229204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 9253 - 9156
Alignment:
Q  12 ccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccca 109  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9253 ccacttagtggttggacccaccatctattttctgtgtctatctctctccaacttgcaaatctccatttattttgccaaatggagatgatcttcaccca 9156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 1266 - 1398
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    ||||||||||||| |||||||||||||| |   ||  | ||||||||||| |||||||| |||||||||||||||||||||||||||||||  |||||||    
T  1266 taatacctcaaatccgtccttgaattttaaaaaattggttaaattcgtccatgaattttatgaaatatctatttagtccctgaattttacagacgtccat 1365  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||| |||||||||||||||||||||    
T  1366 caaaatggtccctccgtccaaaagctccgttag 1398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 16453 - 16353
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcacc 107  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||| || ||||||||||||||||    
T  16453 ggacccacttagtggtaggacccaccatttattttttgtgtctatctctctccaacttgcaaaactccatttattttgcctaacggagaggatcttcacc 16354  T
Q  108 c 108  Q
    |    
T  16353 c 16353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 7168 - 7270
Alignment:
Q  10 acccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctcc----atttattttgccaaatggagaggatcttca 105  Q
    ||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    ||||||||||||||||||||||||||||||    
T  7168 acccacttaatagtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttatttattttgccaaatggagaggatcttca 7267  T
Q  106 ccc 108  Q
    |||    
T  7268 ccc 7270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 66; Significance: 6e-29; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 350 - 487
Target Start/End: Original strand, 3291 - 3428
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactc 449  Q
    ||||| |||||||||||||||||||||||||||| |   ||| || || || |||||||||||||| |||||||| | |||||||||||||||||||  |    
T  3291 attgactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagac 3390  T
Q  450 gtccatcaaaatggtccttccgtccaaaagctccgtta 487  Q
    |||||||||| | |||| |||||||||||| |||||||    
T  3391 gtccatcaaattcgtccctccgtccaaaaggtccgtta 3428  T

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Target: scaffold0058; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 350 - 487
Target Start/End: Original strand, 4463 - 4600
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactc 449  Q
    ||||| |||||||||||||||||||||||||||| |   ||| || || || |||||||||||||| |||||||| | |||||||||||||||||||  |    
T  4463 attgactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagac 4562  T
Q  450 gtccatcaaaatggtccttccgtccaaaagctccgtta 487  Q
    |||||||||| | |||| |||||||||||| |||||||    
T  4563 gtccatcaaattcgtccctccgtccaaaaggtccgtta 4600  T

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Target: scaffold0058; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 350 - 442
Target Start/End: Complemental strand, 14435 - 14343
Alignment:
Q  350 attgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    ||||| |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||| |||||||| | |||||||||||||||    
T  14435 attgactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 14343  T

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Target: scaffold0564 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 356 - 488
Target Start/End: Original strand, 8265 - 8395
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 455  Q
    |||||||||||||||||||||||||||| |   ||  || |||||||| | |||||||||  ||||||||||||||||||||||||||| |  |||||||    
T  8265 taatacctcaaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtccctgaattttata--cgtccat 8362  T
Q  456 caaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||| | |||||||||||||| ||||||    
T  8363 caaaatggtacatccgtccaaaagcttcgttag 8395  T

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Target: scaffold0006 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 73896 - 73817
Alignment:
Q  25 ggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttc 104  Q
    ||||||||||||||| ||||| |||| ||||||||||||||||||| | |||||||||||||||||| ||||||||||||    
T  73896 ggacccaccatctatattttgcgtctatctctctccaacttgcaaaacaccatttattttgccaaatagagaggatcttc 73817  T

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Target: scaffold0456 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 13710 - 13799
Alignment:
Q  20 tggtaggacccaccatctattttttgt-gtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccc 108  Q
    |||| |||||||||||||||||||| | |||| ||||||||||||| ||||| ||| ||||||||||||||||||||| |||||||||||    
T  13710 tggtgggacccaccatctatttttttttgtctatctctctccaactagcaaaactctatttattttgccaaatggagaagatcttcaccc 13799  T

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Target: scaffold0009 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 6489 - 6396
Alignment:
Q  10 acccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatctt 103  Q
    ||||| ||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||   ||||||||||| | |||| |||||||||||    
T  6489 acccatttagttgtaggacccaccatctattttttgtgtctgtctctttccaacttgcaaaatcccatttattttacgaaatagagaggatctt 6396  T

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Target: scaffold0126 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 22493 - 22398
Alignment:
Q  13 cacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttcaccca 109  Q
    ||||||||||||||| |||| ||||||||||||||||| ||||| |  || ||||||| ||||||||||||||| ||||| |||||||||| |||||    
T  22493 cacttagtggtaggatccactatctattttttgtgtctatctctttgtaaattgcaaa-ctccatttattttgctaaatgcagaggatcttaaccca 22398  T

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Target: scaffold0345 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 442
Target Start/End: Complemental strand, 1641 - 1555
Alignment:
Q  356 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattt 442  Q
    |||||| ||||||||||||||||||||| |   ||| |  ||||||||||||||||||||  ||||| | |||||||||||||||||    
T  1641 taatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaattt 1555  T

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Target: scaffold0477 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 472
Target Start/End: Complemental strand, 6740 - 6639
Alignment:
Q  371 gtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttcc 470  Q
    |||| ||||||||||| | || || |||||||||||| |||| ||||||||||| ||||| |||||||||||  ||  | |||||||||| ||||| |||    
T  6740 gtccctgaattttcacgggtcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctccatcaaaaaggtccctcc 6641  T
Q  471 gt 472  Q
    ||    
T  6640 gt 6639  T

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Target: scaffold0004 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 432
Target Start/End: Original strand, 106670 - 106747
Alignment:
Q  353 gagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagt 432  Q
    |||||||| |||||||||||||||||||||  ||  |||||| ||||| |||| ||||||||  ||||||||||||||||    
T  106670 gagtaatatctcaaattcgtccttgaattt--accaatcagccaaatttgtccatgaattttacgaaatatctatttagt 106747  T

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Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 429
Target Start/End: Original strand, 436265 - 436341
Alignment:
Q  353 gagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctattt 429  Q
    |||||| ||||||||||||| ||||||||||||   |||||| |||||| ||| | ||||||| |||||||||||||    
T  436265 gagtaacacctcaaattcgttcttgaattttcaaaaatcagccaaattcatccataaattttgcgaaatatctattt 436341  T

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Target: scaffold0062 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 58701 - 58786
Alignment:
Q  10 acccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggaga 96  Q
    ||||||||| |||||||| |||| ||||||||| | ||| | ||||||||||| ||||| || |||||||||||||| |||| ||||    
T  58701 acccacttaatggtaggatccactatctattttatatgtttatctctctccaaattgcatat-tccatttattttgctaaatcgaga 58786  T

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Target: scaffold0171 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 17362 - 17311
Alignment:
Q  8 ggacccacttagtggtaggacccaccatctattttttgtgtctttctctctc 59  Q
    |||||||||||||| ||||||||| ||  |||||||||||||| ||||||||    
T  17362 ggacccacttagtgataggacccagcacttattttttgtgtctatctctctc 17311  T

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Target: scaffold0664 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 4753 - 4695
Alignment:
Q  12 ccacttagtggtaggacccaccatctatttttt-gtgtctttctctctccaacttgcaa 69  Q
    |||||||||| ||||||||||||  |||||||| |||||| ||||||||||| ||||||    
T  4753 ccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 4695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 488
Target Start/End: Complemental strand, 30517 - 30460
Alignment:
Q  431 gtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    |||||||||||| |||  |||| |||||||| || |||||||||||| ||||||||||    
T  30517 gtccctgaatttaacaaacgtcaatcaaaatagttcttccgtccaaatgctccgttag 30460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 488
Target Start/End: Complemental strand, 36899 - 36839
Alignment:
Q  428 ttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttag 488  Q
    ||||||||||||||| |||  |||| |||||| | ||||||||||||||| || |||||||    
T  36899 ttagtccctgaatttaacaaacgtcaatcaaattagtccttccgtccaaatgcaccgttag 36839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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