View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0135_low_3 (Length: 296)

Name: NF0135_low_3
Description: NF0135
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0135_low_3
NF0135_low_3
[»] chr5 (3 HSPs)
chr5 (1-194)||(38434899-38435092)
chr5 (13-194)||(26354249-26354430)
chr5 (12-194)||(9815649-9815831)
[»] chr3 (15 HSPs)
chr3 (21-194)||(19956699-19956872)
chr3 (15-175)||(19832504-19832664)
chr3 (19-194)||(19819175-19819350)
chr3 (20-194)||(19839008-19839182)
chr3 (14-194)||(19812898-19813078)
chr3 (13-194)||(20033656-20033837)
chr3 (15-194)||(26653763-26653942)
chr3 (13-194)||(19951739-19951920)
chr3 (41-194)||(20035953-20036106)
chr3 (12-120)||(20046809-20046917)
chr3 (12-194)||(20015522-20015704)
chr3 (13-194)||(26647619-26647800)
chr3 (18-194)||(19990140-19990316)
chr3 (15-163)||(20007596-20007744)
chr3 (16-175)||(19849630-19849789)
[»] chr8 (2 HSPs)
chr8 (15-187)||(22655640-22655812)
chr8 (101-194)||(11544685-11544778)
[»] chr1 (1 HSPs)
chr1 (14-194)||(1717835-1718015)
[»] chr4 (1 HSPs)
chr4 (12-90)||(6397102-6397180)
[»] chr7 (3 HSPs)
chr7 (13-88)||(12579410-12579485)
chr7 (11-88)||(12495311-12495388)
chr7 (11-88)||(12519115-12519192)
[»] chr2 (1 HSPs)
chr2 (101-194)||(39191386-39191479)


Alignment Details
Target: chr5 (Bit Score: 182; Significance: 2e-98; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 38434899 - 38435092
Alignment:
Q  1 caacctaatgtcgattgcttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  38434899 caacctaatgtcgattgcttccaccaccttgcataacgcttggtaacatctgcctcaaataatcttggtggaaaatacaaatttttatcaaatatgagac 38434998  T
Q  101 tgcagtagtttttctaagcaattgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattctaaattacatagcatctct 194  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38434999 tgcggtagtttttctaagcaattgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattctaaattacatagcatctct 38435092  T

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Target: chr5; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 13 - 194
Target Start/End: Original strand, 26354249 - 26354430
Alignment:
Q  13 gattgcttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagattgcagtagtttt 112  Q
    |||||| |||||||| ||||||||||  |||| ||||||| |||| | | ||||||||| |||||||||| | |||||||||| ||  | || |||||||    
T  26354249 gattgcctccaccacattgcataacgtgtggttacatctgcctcataaagtcttggtgggaaatacaaatctgtatcaaatataagcctacaatagtttt 26354348  T
Q  113 tctaagcaattgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattctaaattacatagcatctct 194  Q
    || |||||||  ||||||||||||| || ||| ||||||||||||||||||||||||| |||| ||||| ||||||| ||||    
T  26354349 tccaagcaatgaatttagtctcattaaatctaggcacataacttggaacatcttgatccattccaaattgcatagcaactct 26354430  T

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Target: chr5; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 9815831 - 9815649
Alignment:
Q  12 cgattgcttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagattgcagtagttt 111  Q
    |||||||||||||||| ||| ||| ||  |||||||||||| |||||| | ||||||||||||||||||||||| |||| |||| ||  | || ||||||    
T  9815831 cgattgcttccaccacattgtatatcgtgtggtaacatctgcctcaaaaagtcttggtggaaaatacaaattttgatcagatataagcctacaatagttt 9815732  T
Q  112 ttctaagcaattgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattctaaattacatagcatctct 194  Q
    ||| |||| ||   |||||||||||| || ||| |||||||| |||||||||||||||| |||  ||||| ||||||| ||||    
T  9815731 ttccaagccatgagtttagtctcattgaatctaggcacataagttggaacatcttgatccatttcaaattgcatagcaactct 9815649  T

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Target: chr3 (Bit Score: 94; Significance: 7e-46; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 21 - 194
Target Start/End: Complemental strand, 19956872 - 19956699
Alignment:
Q  21 ccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagattgcagtagtttttctaagca 120  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| |  |||||||||||||| |||||    
T  19956872 ccaccaccttgcataacgtgtggtaacatctgcctcaaataatcttggtggaaaatacaagtttttatcatatatgggtctgcagtagtttttccaagca 19956773  T
Q  121 attgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattctaaattacatagcatctct 194  Q
    ||  ||||||||||||| ||||||   |||||||  ||||||||||||||||||| ||||| ||||||| ||||    
T  19956772 atgtatttagtctcattgaacctagctacataacccggaacatcttgatcaattccaaattgcatagcaactct 19956699  T

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Target: chr3; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 15 - 175
Target Start/End: Complemental strand, 19832664 - 19832504
Alignment:
Q  15 ttgcttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagattgcagtagtttttc 114  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||  |  ||||||||||||||    
T  19832664 ttgcttccaccaccttgcataacgtgtggtaacatctgcctcaaataatcttggtggaaaatacaagtttttatcagatattggcctgcagtagtttttc 19832565  T
Q  115 taagcaattgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattc 175  Q
     |||||||  ||||||||||||| ||||||  ||||||||  |||||||||||||||||||    
T  19832564 caagcaatgtatttagtctcattgaacctagccacataaccaggaacatcttgatcaattc 19832504  T

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Target: chr3; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 19819350 - 19819175
Alignment:
Q  19 ttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagattgcagtagtttttctaag 118  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||  |  |||||||||||||| |||    
T  19819350 ttccaccaccttgcataacgtgtggtaacatctgcctcaaataatcttggtggaaaatacaagtttttatcagatattggcctgcagtagtttttccaag 19819251  T
Q  119 caattgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattctaaattacatagcatctct 194  Q
    ||||  ||||||||||||| ||||||  ||||||||  ||||||||||||||||||| ||| | ||||||| ||||    
T  19819250 caatgtatttagtctcattgaacctagccacataaccaggaacatcttgatcaattccaaactgcatagcaactct 19819175  T

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Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 20 - 194
Target Start/End: Complemental strand, 19839182 - 19839008
Alignment:
Q  20 tccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagattgcagtagtttttctaagc 119  Q
    |||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| |  |||| ||||||||| ||||    
T  19839182 tccaccaccttgcataacgtatggtaacatctgcctcaaataatcttggtggaaaatacaagtttttatcatatatgggtctgcaatagtttttccaagc 19839083  T
Q  120 aattgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattctaaattacatagcatctct 194  Q
    |||  |||||||| |||| ||||||  |||||||| ||||||||||||||| ||||  |||| ||||||| ||||    
T  19839082 aatgtatttagtcacattgaacctagccacataacctggaacatcttgatccattccgaattgcatagcaactct 19839008  T

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Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 19813078 - 19812898
Alignment:
Q  14 attgcttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagattgcagtagttttt 113  Q
    |||||||||||||| |  ||||| || |||||||||||| |||||| | |||||||||||||||||| ||||||||| |||||||  |||||||||||||    
T  19813078 attgcttccaccacttgacataatgcgtggtaacatctgcctcaaaaagtcttggtggaaaatacaattttttatcagatatgagcctgcagtagttttt 19812979  T
Q  114 ctaagcaattgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattctaaattacatagcatctct 194  Q
    | | |||||   |||||| | ||| |||||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||    
T  19812978 ccatgcaatcactttagttttattgaacctaggcacataacttggaacatcttgatcaattccaaattgcatagcaactct 19812898  T

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Target: chr3; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 13 - 194
Target Start/End: Original strand, 20033656 - 20033837
Alignment:
Q  13 gattgcttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagattgcagtagtttt 112  Q
    ||||||||||||||  ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||| | ||| |    |||||||||     
T  20033656 gattgcttccaccagtttgcataacgcgtggtaacatctgcctcaaataatcttggtggaaaatacaaattttcatcagagatgggccgacagtagtttc 20033755  T
Q  113 tctaagcaattgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattctaaattacatagcatctct 194  Q
    || ||||| |   ||||||||| || |||||| ||||||||||||||||||||||||| |||| ||||| ||||||| ||||    
T  20033756 tccaagcattctctttagtctcgttgaacctaggcacataacttggaacatcttgatccattccaaattgcatagcaactct 20033837  T

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Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 194
Target Start/End: Complemental strand, 26653942 - 26653763
Alignment:
Q  15 ttgcttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagattgcagtagtttttc 114  Q
    ||||||||||||| ||||||||||| || | ||||||| |||||| || ||||||||||||||||||||||||| | | ||  |  |||||||||||| |    
T  26653942 ttgcttccaccactttgcataacgcatgatgacatctgcctcaaacaaccttggtggaaaatacaaatttttataagaaataggcctgcagtagttttcc 26653843  T
Q  115 taagcaattgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattctaaattacatagcatctct 194  Q
     |||||||  ||||||||||||| ||||||  ||||||||||||||||||||| ||||||| ||||| ||||||| ||||    
T  26653842 caagcaatgtatttagtctcattgaacctagccacataacttggaacatcttggtcaattccaaattgcatagcaactct 26653763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 194
Target Start/End: Complemental strand, 19951920 - 19951739
Alignment:
Q  13 gattgcttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagattgcagtagtttt 112  Q
    ||||||| ||||||| ||||||||||| || || |||| | |||||| | | ||| |||||||||||||||||||||| ||||| |  ||||||||||||    
T  19951920 gattgctcccaccactttgcataacgcatgctagcatcagcctcaaaaatttttgatggaaaatacaaatttttatcagatatgggcctgcagtagtttt 19951821  T
Q  113 tctaagcaattgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattctaaattacatagcatctct 194  Q
    || |||||||   |||||| | ||| |||||| |||||||||| |||||||||||||| |||  ||||| ||||||| ||||    
T  19951820 tccaagcaatcactttagttttattgaacctaggcacataactcggaacatcttgatccattgcaaattgcatagcaactct 19951739  T

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Target: chr3; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 41 - 194
Target Start/End: Original strand, 20035953 - 20036106
Alignment:
Q  41 tggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagattgcagtagtttttctaagcaattgatttagtctcatttaa 140  Q
    |||||||||||| |||||| | |||||||||||||||||| ||||||||| |||||||  ||||||||||| || |||||||   |||||| | |||  |    
T  20035953 tggtaacatctgcctcaaaaagtcttggtggaaaatacaattttttatcagatatgagcctgcagtagtttctccaagcaatcactttagttttattgca 20036052  T
Q  141 cctaagcacataacttggaacatcttgatcaattctaaattacatagcatctct 194  Q
    ||||  ||| ||||| ||||||||||||||||||| ||||| ||||||| ||||    
T  20036053 cctagccacgtaactcggaacatcttgatcaattccaaattgcatagcaactct 20036106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 20046917 - 20046809
Alignment:
Q  12 cgattgcttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagattgcagtagttt 111  Q
    |||||||||||||||| || |||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| | ||| |  ||||||||||     
T  20046917 cgattgcttccaccactttacataacgcatggtaacatctgcctcaaacaatcttggtggaaaatacaaatttttatcagacatgggcctgcagtagttg 20046818  T
Q  112 ttctaagca 120  Q
    ||| |||||    
T  20046817 ttccaagca 20046809  T

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Target: chr3; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 12 - 194
Target Start/End: Original strand, 20015522 - 20015704
Alignment:
Q  12 cgattgcttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagattgcagtagttt 111  Q
    |||||||||||||||| ||||||||||  |||  ||||||| |||||| | |||||||||||||||||| ||||||||| |||| ||  | || || | |    
T  20015522 cgattgcttccaccacattgcataacgtgtggctacatctgcctcaaagagtcttggtggaaaatacaagtttttatcagatataagcctacaataatat 20015621  T
Q  112 ttctaagcaattgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattctaaattacatagcatctct 194  Q
    ||| ||||| |   |||||||||||| || ||| |||||| || ||||||||||||||| |||| ||||| ||||||| ||||    
T  20015622 ttccaagcagtgattttagtctcattgaatctaggcacatcacctggaacatcttgatccattccaaattgcatagcaactct 20015704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 194
Target Start/End: Complemental strand, 26647800 - 26647619
Alignment:
Q  13 gattgcttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagattgcagtagtttt 112  Q
    ||||| ||||||||||||||||||||  | |||||||||| |||||| ||||| | ||| ||||||||| |  ||||| ||||| |  | ||||||||||    
T  26647800 gattgtttccaccaccttgcataacgggtagtaacatctgcctcaaaaaatctcgatgggaaatacaaactcctatcagatatgcgtctacagtagtttt 26647701  T
Q  113 tctaagcaattgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattctaaattacatagcatctct 194  Q
    || |||||||   |||||||||||| || | | |||||| ||| |||||||||||||| |||| ||||| ||||||| ||||    
T  26647700 tccaagcaatgtctttagtctcattgaatcgaggcacatcactcggaacatcttgatccattccaaattgcatagcaactct 26647619  T

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Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 194
Target Start/End: Complemental strand, 19990316 - 19990140
Alignment:
Q  18 cttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagattgcagtagtttttctaa 117  Q
    ||||||||||  |||||||||  |||||||||||| |||||| || || | ||||||||||| || || |||| ||||| |  ||  |||||||| | ||    
T  19990316 cttccaccactctgcataacgagtggtaacatctgcctcaaacaacctcgatggaaaatacacatgttcatcagatatgggcctgttgtagttttcccaa 19990217  T
Q  118 gcaattgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattctaaattacatagcatctct 194  Q
    ||||  |||| ||||||||| |||||| |||| |||||||||| ||||||||| |||| ||||| || |||| ||||    
T  19990216 gcaacagattcagtctcattgaacctaggcacgtaacttggaatatcttgatccattccaaattgcaaagcaactct 19990140  T

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Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 20007596 - 20007744
Alignment:
Q  15 ttgcttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagattgcagtagtttttc 114  Q
    ||||||||||||| ||||||| ||  ||   ||| ||| ||||||  ||||||||||||||||||||||||||||| |||| ||  |  | ||||| |||    
T  20007596 ttgcttccaccactttgcatatcgtgtgcgtacagctgcctcaaaatatcttggtggaaaatacaaatttttatcagatataagcctaaaatagttcttc 20007695  T
Q  115 taagcaattgatttagtctcatttaacctaagcacataacttggaacat 163  Q
     |||||||  ||||||||||||| |||||| |||||| | |||||||||    
T  20007696 caagcaatgaatttagtctcattgaacctaggcacattagttggaacat 20007744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 19849789 - 19849630
Alignment:
Q  16 tgcttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagattgcagtagtttttct 115  Q
    |||||||||||| ||||||||||   ||||||||| | ||| || |  || |||||||||||||||  |||||||   | | |  |||| ||||||| |     
T  19849789 tgcttccaccactttgcataacgtacggtaacatcagcctcgaaaagcctcggtggaaaatacaaacgtttatcatggacgggtctgcaatagttttgcc 19849690  T
Q  116 aagcaattgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattc 175  Q
    |||||||   |||||| |||||||||||  ||||||||||||||||||||||||| ||||    
T  19849689 aagcaatgtctttagtatcatttaacctcggcacataacttggaacatcttgatccattc 19849630  T

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Target: chr8 (Bit Score: 89; Significance: 6e-43; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 15 - 187
Target Start/End: Original strand, 22655640 - 22655812
Alignment:
Q  15 ttgcttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagattgcagtagtttttc 114  Q
    |||||||||||||||||||||| |  |||||||||||  ||||||||||||||||||||||||||| ||||||||| ||||| |  ||||||||||||||    
T  22655640 ttgcttccaccaccttgcataatgtgtggtaacatctatctcaaataatcttggtggaaaatacaagtttttatcagatatgggtctgcagtagtttttc 22655739  T
Q  115 taagcaattgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattctaaattacatag 187  Q
     |||||||  ||||||||||||| ||||||   |||||||  ||||||||||||||||||| ||||| |||||    
T  22655740 caagcaatgtatttagtctcattgaacctagctacataacccggaacatcttgatcaattccaaattgcatag 22655812  T

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Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 194
Target Start/End: Complemental strand, 11544778 - 11544685
Alignment:
Q  101 tgcagtagtttttctaagcaattgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattctaaattacatagcatctct 194  Q
    ||||||| |||||| ||||||| | || | ||||||| || ||| ||||| ||  ||||||||||||||| |||| ||||| ||||||| ||||    
T  11544778 tgcagtaatttttccaagcaatggtttcattctcattgaatctaggcacacaagctggaacatcttgatccattccaaattgcatagcaactct 11544685  T

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Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 1718015 - 1717835
Alignment:
Q  14 attgcttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatcaaatatgagattgcagtagttttt 113  Q
    |||||||||||||||||||||||||   |||||||| |  |||||| ||||| | |||||||||||  ||||||||| ||||| |  ||||||||| |||    
T  1718015 attgcttccaccaccttgcataacgtgaggtaacatttccctcaaaaaatctcgatggaaaatacatttttttatcagatatgggcctgcagtagtgttt 1717916  T
Q  114 ctaagcaattgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattctaaattacatagcatctct 194  Q
    | ||||||| ||||||| |||||| || ||| |||||| |||||||||||||||||| |||| ||||| ||||||| ||||    
T  1717915 ccaagcaatggatttagcctcattgaatctaggcacatcacttggaacatcttgatccattccaaattgcatagcaactct 1717835  T

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Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 6397102 - 6397180
Alignment:
Q  12 cgattgcttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttatca 90  Q
    |||||||||| ||||| |||||||| || | |||||||| | |||||| | ||||||||||||||||||||||||||||    
T  6397102 cgattgcttctaccactttgcataatgcatagtaacatcagcctcaaacagtcttggtggaaaatacaaatttttatca 6397180  T

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Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 12579410 - 12579485
Alignment:
Q  13 gattgcttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttat 88  Q
    ||||||||||||||| || |||||||| |||||| ||||| |||||| | || ||||| |||||||||||||||||    
T  12579410 gattgcttccaccactttacataacgcatggtaatatctgcctcaaacagtcatggtgcaaaatacaaatttttat 12579485  T

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Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 12495311 - 12495388
Alignment:
Q  11 tcgattgcttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttat 88  Q
    |||||||||||||| || || |||||||| |||||| ||||| |||||| | || ||||| |||||||||||||||||    
T  12495311 tcgattgcttccacaactttacataacgcatggtaatatctgcctcaaacagtcatggtgcaaaatacaaatttttat 12495388  T

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Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 12519115 - 12519192
Alignment:
Q  11 tcgattgcttccaccaccttgcataacgcttggtaacatctggctcaaataatcttggtggaaaatacaaatttttat 88  Q
    ||||||||||||||||| || |||||||| ||||||  |||| |||||| | || ||||| |||||||||||||||||    
T  12519115 tcgattgcttccaccactttacataacgcatggtaatttctgcctcaaacagtcatggtgcaaaatacaaatttttat 12519192  T

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Target: chr2 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 194
Target Start/End: Original strand, 39191386 - 39191479
Alignment:
Q  101 tgcagtagtttttctaagcaattgatttagtctcatttaacctaagcacataacttggaacatcttgatcaattctaaattacatagcatctct 194  Q
    ||||||| |||||| ||||||| | || ||||||||| || ||| ||||| ||  ||||||||||||||| |||| ||||| ||||||| ||||    
T  39191386 tgcagtaatttttccaagcaatggtttcagtctcattgaatctaggcacacaatctggaacatcttgatccattccaaattgcatagcaactct 39191479  T

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