View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0147_high_1 (Length: 412)
Name: NF0147_high_1
Description: NF0147
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0147_high_1 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 344; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 65 - 412
Target Start/End: Complemental strand, 48167997 - 48167650
Alignment:
| Q |
65 |
tcccatactcacatctcttgcctacaaaaagtaaagttgcatacataattgagttgaattatatactatataatctagtgtaatttaatgtcatgtaaat |
164 |
Q |
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| T |
48167997 |
tcccatactcacatctcttgcctacaaaaagtaaagttgcatacataattgagttgaattatatactatataatctagtgtaatttaatgtcatgtaaat |
48167898 |
T |
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| Q |
165 |
gagtgaattgtactacctttctggtgagctgatctcttgcatcaagatccaactctatgactttctgtcctgacagaatttgcaaagcaacaattccaaa |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48167897 |
gagtgaattgtactacctttctggtgagctgatctcttgcatcaagatccaactctatgactttctgtcctgacagaatttgcaaagcaacaattccaaa |
48167798 |
T |
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| Q |
265 |
actaaatacatcactggcacaagttaacttggcattactcatgtactctggatccatgtaacctatagttcctctaacatcagtaaaaaccttgctctct |
364 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48167797 |
actatatacatcactggcacaagttaacttggcattactcatgtactctggatccatgtaacctatagttcctctaacatcagtaaaaaccttgctctct |
48167698 |
T |
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| Q |
365 |
tccatgcccatcatccttgacaatccaaaatccgacagtttggcttca |
412 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48167697 |
tccatgcccatcatccttgacaatccaaaatccgacagtttggcttca |
48167650 |
T |
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