View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0150_high_3 (Length: 328)
Name: NF0150_high_3
Description: NF0150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0150_high_3 |
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Alignment Details
Target: chr2 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 25 - 313
Target Start/End: Complemental strand, 7805387 - 7805098
Alignment:
| Q |
25 |
agatctattcttgatggtgttatggaaaccatataaatttttctttgtatgaaatccatgaccgtgtaaaacaagagatgtggctttaaagcttgatatt |
124 |
Q |
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| T |
7805387 |
agatctattcttgatggtgttatggaaaccatataaatttttctttgtatgaaatccatgaccgtgtaaaacaagagatgtggctttaaagcttgatatt |
7805288 |
T |
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| Q |
125 |
agcaaagtctacgatcaaattgactggaatcatcaacacttattagaaaagcataaagtagaggtgatattcatggagccaaaatatacaagaatgcttc |
224 |
Q |
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| T |
7805287 |
agcatagtctacgatcaaattgaccggaatcatcaacacttattagaaaagcataaagtataggtgatattcatggagccaaaatatacaagaatgcttc |
7805188 |
T |
|
| Q |
225 |
aattatttcacatcttcgttttgttgatgattgactcttacta-ttccaagcatctgatagtgtagctcttgcgatgaaacatattatat |
313 |
Q |
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| T |
7805187 |
gattatttcacatcttcattttgttgatgattgactcttactatttccaagcatctgatagtgtagctcttgcgatgaaacatattatat |
7805098 |
T |
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