View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0151-INSERTION6 (Length: 718)

Name: NF0151-INSERTION6
Description: NF0151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0151-INSERTION6
NF0151-INSERTION6
[»] chr7 (59 HSPs)
chr7 (8-718)||(13384543-13385276)
chr7 (8-165)||(18087568-18087725)
chr7 (8-109)||(17885669-17885770)
chr7 (8-146)||(43124400-43124539)
chr7 (8-81)||(10936108-10936181)
chr7 (8-109)||(17102275-17102376)
chr7 (8-148)||(18086330-18086471)
chr7 (8-109)||(27991994-27992095)
chr7 (8-148)||(33808364-33808505)
chr7 (8-172)||(47945398-47945554)
chr7 (8-172)||(47950828-47950984)
chr7 (57-164)||(4226215-4226323)
chr7 (8-75)||(27396670-27396737)
chr7 (8-79)||(40380000-40380071)
chr7 (8-109)||(2640219-2640320)
chr7 (8-81)||(24389099-24389172)
chr7 (8-75)||(48788844-48788911)
chr7 (9-75)||(3914458-3914524)
chr7 (8-81)||(6253754-6253827)
chr7 (8-109)||(19204744-19204845)
chr7 (8-81)||(28469051-28469124)
chr7 (8-77)||(42019638-42019707)
chr7 (8-116)||(5457186-5457294)
chr7 (8-107)||(42362491-42362590)
chr7 (8-109)||(13386033-13386134)
chr7 (57-153)||(45914614-45914711)
chr7 (58-153)||(25628569-25628665)
chr7 (10-81)||(6571262-6571332)
chr7 (8-107)||(17886778-17886877)
chr7 (10-109)||(22871351-22871450)
chr7 (111-164)||(47558175-47558228)
chr7 (8-151)||(5455868-5456012)
chr7 (58-156)||(12228476-12228575)
chr7 (58-147)||(23058674-23058764)
chr7 (111-153)||(32934587-32934629)
chr7 (8-109)||(42731705-42731806)
chr7 (58-153)||(42618150-42618246)
chr7 (57-163)||(12644036-12644143)
chr7 (8-146)||(18855902-18856041)
chr7 (8-75)||(32053184-32053251)
chr7 (8-59)||(32298818-32298869)
chr7 (48-150)||(32688462-32688565)
chr7 (111-150)||(47558983-47559022)
chr7 (111-153)||(10600188-10600230)
chr7 (8-110)||(42363671-42363772)
chr7 (8-148)||(32068137-32068278)
chr7 (111-148)||(42618056-42618093)
chr7 (8-144)||(43266514-43266651)
chr7 (8-77)||(47946792-47946861)
chr7 (8-77)||(47952222-47952291)
chr7 (111-151)||(23058574-23058614)
chr7 (58-153)||(32068335-32068431)
chr7 (58-153)||(46205548-46205644)
chr7 (58-148)||(25628722-25628813)
chr7 (58-148)||(32934439-32934530)
chr7 (111-153)||(25453367-25453409)
chr7 (8-78)||(45010921-45010991)
chr7 (111-148)||(27138185-27138222)
chr7 (48-81)||(37657164-37657197)
[»] chr3 (60 HSPs)
chr3 (251-547)||(35716687-35716982)
chr3 (547-718)||(35712918-35713090)
chr3 (8-138)||(41558138-41558269)
chr3 (8-109)||(19740964-19741065)
chr3 (8-86)||(53757032-53757110)
chr3 (8-109)||(23458020-23458121)
chr3 (8-109)||(33689423-33689523)
chr3 (8-81)||(36417729-36417802)
chr3 (8-81)||(40758424-40758497)
chr3 (8-81)||(36418002-36418075)
chr3 (21-109)||(46475067-46475155)
chr3 (8-83)||(3849072-3849147)
chr3 (8-109)||(9367782-9367883)
chr3 (8-164)||(9368531-9368688)
chr3 (270-347)||(49023632-49023709)
chr3 (8-99)||(41558049-41558140)
chr3 (8-81)||(26463673-26463746)
chr3 (8-81)||(42343045-42343118)
chr3 (8-81)||(42855619-42855692)
chr3 (8-153)||(3469241-3469387)
chr3 (57-146)||(32717025-32717115)
chr3 (8-153)||(40788659-40788805)
chr3 (23-109)||(43384569-43384655)
chr3 (64-159)||(6956345-6956442)
chr3 (8-151)||(13948821-13948965)
chr3 (58-153)||(29118777-29118873)
chr3 (111-166)||(29192894-29192948)
chr3 (58-148)||(35643942-35644033)
chr3 (111-166)||(35759029-35759084)
chr3 (58-148)||(41422063-41422154)
chr3 (58-159)||(1078627-1078729)
chr3 (111-153)||(3596348-3596390)
chr3 (58-155)||(52032229-52032327)
chr3 (225-270)||(49946990-49947035)
chr3 (111-148)||(52032383-52032420)
chr3 (8-116)||(25108374-25108482)
chr3 (58-153)||(32306515-32306611)
chr3 (111-151)||(40788565-40788605)
chr3 (111-159)||(43608717-43608765)
chr3 (8-79)||(3850443-3850514)
chr3 (58-148)||(29118629-29118720)
chr3 (57-151)||(29192125-29192220)
chr3 (8-79)||(41988625-41988696)
chr3 (111-146)||(45279204-45279239)
chr3 (8-95)||(53856357-53856444)
chr3 (111-153)||(10294706-10294748)
chr3 (111-149)||(32716394-32716432)
chr3 (111-148)||(3469444-3469481)
chr3 (111-172)||(41989510-41989571)
chr3 (58-153)||(29686032-29686128)
chr3 (22-109)||(9294013-9294100)
chr3 (8-95)||(53856056-53856143)
chr3 (58-147)||(37778518-37778608)
chr3 (8-153)||(47551534-47551680)
chr3 (111-148)||(10307619-10307656)
chr3 (111-148)||(29686185-29686222)
chr3 (8-41)||(35712085-35712118)
chr3 (8-109)||(36314339-36314440)
chr3 (8-109)||(48322418-48322519)
chr3 (48-109)||(55052360-55052421)
[»] chr4 (70 HSPs)
chr4 (266-489)||(816746-816969)
chr4 (487-592)||(817029-817134)
chr4 (8-147)||(147360-147500)
chr4 (8-147)||(148002-148142)
chr4 (8-109)||(24349715-24349816)
chr4 (8-81)||(52909567-52909640)
chr4 (8-108)||(1179087-1179187)
chr4 (8-79)||(10781800-10781871)
chr4 (8-109)||(13058268-13058369)
chr4 (8-109)||(37248491-37248592)
chr4 (8-81)||(51692833-51692906)
chr4 (8-146)||(55867362-55867501)
chr4 (21-107)||(54713683-54713769)
chr4 (8-109)||(7452089-7452190)
chr4 (8-81)||(10780754-10780827)
chr4 (8-81)||(10974363-10974436)
chr4 (8-81)||(14802049-14802122)
chr4 (8-81)||(34765421-34765494)
chr4 (8-109)||(37976194-37976295)
chr4 (8-109)||(50418709-50418810)
chr4 (58-159)||(32063571-32063673)
chr4 (8-78)||(35028039-35028109)
chr4 (8-81)||(24350746-24350819)
chr4 (8-109)||(24711366-24711467)
chr4 (8-81)||(36008885-36008958)
chr4 (8-109)||(43155570-43155671)
chr4 (8-109)||(44967110-44967211)
chr4 (8-109)||(46661200-46661301)
chr4 (8-81)||(49879248-49879321)
chr4 (8-103)||(39539210-39539305)
chr4 (8-74)||(11108161-11108227)
chr4 (8-153)||(27068951-27069097)
chr4 (8-81)||(5369181-5369254)
chr4 (8-109)||(15507714-15507815)
chr4 (8-75)||(18831637-18831704)
chr4 (8-153)||(27891625-27891771)
chr4 (111-153)||(40316904-40316946)
chr4 (111-153)||(40326978-40327020)
chr4 (7-77)||(53129547-53129616)
chr4 (8-109)||(17355966-17356067)
chr4 (58-153)||(52573319-52573415)
chr4 (58-153)||(54858651-54858747)
chr4 (58-160)||(30641609-30641711)
chr4 (58-148)||(50503916-50504007)
chr4 (8-153)||(10408128-10408274)
chr4 (111-153)||(22718178-22718220)
chr4 (8-74)||(23613599-23613665)
chr4 (111-153)||(50504064-50504106)
chr4 (8-109)||(54086736-54086837)
chr4 (48-109)||(54434270-54434331)
chr4 (8-113)||(56015929-56016034)
chr4 (58-153)||(51859498-51859594)
chr4 (111-146)||(23455609-23455644)
chr4 (8-63)||(24411680-24411735)
chr4 (22-148)||(39538135-39538262)
chr4 (111-153)||(22986996-22987038)
chr4 (111-149)||(23455099-23455137)
chr4 (8-157)||(54858795-54858945)
chr4 (111-148)||(27069154-27069191)
chr4 (111-148)||(39666921-39666958)
chr4 (111-151)||(10408034-10408074)
chr4 (58-153)||(39701000-39701096)
chr4 (58-109)||(40388392-40388443)
chr4 (111-153)||(11524188-11524230)
chr4 (8-145)||(39667023-39667161)
chr4 (111-153)||(45463312-45463354)
chr4 (59-113)||(55866201-55866255)
chr4 (111-148)||(11524094-11524131)
chr4 (111-148)||(45463218-45463255)
chr4 (48-109)||(53702098-53702159)
[»] chr2 (42 HSPs)
chr2 (8-163)||(6588724-6588880)
chr2 (8-172)||(25230143-25230311)
chr2 (591-718)||(23485502-23485628)
chr2 (8-116)||(21370481-21370589)
chr2 (8-116)||(44044155-44044263)
chr2 (8-107)||(44045290-44045389)
chr2 (8-109)||(11163095-11163196)
chr2 (8-81)||(13692534-13692607)
chr2 (8-109)||(36480004-36480105)
chr2 (8-109)||(37895388-37895489)
chr2 (8-109)||(39498565-39498666)
chr2 (8-81)||(44713836-44713909)
chr2 (8-109)||(6658133-6658234)
chr2 (8-109)||(16099310-16099411)
chr2 (8-109)||(34448081-34448182)
chr2 (8-109)||(15848374-15848475)
chr2 (8-81)||(36382441-36382514)
chr2 (8-81)||(36755402-36755475)
chr2 (8-109)||(39423801-39423902)
chr2 (57-162)||(25624337-25624443)
chr2 (8-109)||(9076353-9076454)
chr2 (8-163)||(202587-202743)
chr2 (8-116)||(3556288-3556396)
chr2 (8-107)||(25231136-25231235)
chr2 (57-151)||(25623378-25623473)
chr2 (8-153)||(8710707-8710853)
chr2 (8-74)||(45556368-45556434)
chr2 (8-109)||(10713009-10713110)
chr2 (58-153)||(15604578-15604674)
chr2 (8-94)||(3555291-3555377)
chr2 (9-146)||(39936495-39936633)
chr2 (8-69)||(2318836-2318897)
chr2 (111-151)||(8710613-8710653)
chr2 (111-151)||(15604484-15604524)
chr2 (58-153)||(41587325-41587421)
chr2 (111-153)||(11830509-11830551)
chr2 (8-94)||(30729662-30729748)
chr2 (8-109)||(2318199-2318300)
chr2 (8-148)||(41588302-41588443)
chr2 (58-148)||(8342278-8342369)
chr2 (58-116)||(11349484-11349542)
chr2 (89-146)||(29957939-29957997)
[»] chr8 (51 HSPs)
chr8 (8-116)||(20385609-20385717)
chr8 (8-116)||(30711996-30712103)
chr8 (8-116)||(30719773-30719880)
chr8 (9-115)||(30710897-30711003)
chr8 (8-149)||(34177215-34177357)
chr8 (8-116)||(20386709-20386817)
chr8 (8-109)||(13186345-13186446)
chr8 (8-109)||(1425094-1425195)
chr8 (8-81)||(8316694-8316767)
chr8 (8-109)||(22915430-22915531)
chr8 (8-109)||(36928762-36928863)
chr8 (8-81)||(38862877-38862950)
chr8 (8-78)||(36186142-36186212)
chr8 (8-81)||(12198991-12199064)
chr8 (8-81)||(12443419-12443492)
chr8 (8-81)||(23698350-23698423)
chr8 (8-81)||(35756896-35756969)
chr8 (8-81)||(38955986-38956059)
chr8 (8-81)||(39071956-39072028)
chr8 (8-78)||(4994698-4994768)
chr8 (23-160)||(7294157-7294295)
chr8 (8-81)||(12272959-12273032)
chr8 (8-109)||(23663586-23663687)
chr8 (58-150)||(35634341-35634434)
chr8 (8-109)||(40318005-40318106)
chr8 (8-163)||(2535781-2535937)
chr8 (58-153)||(15230170-15230266)
chr8 (23-146)||(34176497-34176621)
chr8 (8-146)||(2534736-2534875)
chr8 (8-107)||(7295215-7295314)
chr8 (8-153)||(25124802-25124948)
chr8 (8-78)||(34685575-34685644)
chr8 (8-107)||(34061616-34061715)
chr8 (8-148)||(10445579-10445720)
chr8 (111-151)||(15230076-15230116)
chr8 (58-153)||(37542464-37542560)
chr8 (58-148)||(42945205-42945296)
chr8 (58-148)||(44664752-44664843)
chr8 (111-153)||(21432932-21432974)
chr8 (8-62)||(33357539-33357593)
chr8 (111-148)||(27500233-27500270)
chr8 (8-109)||(31608799-31608900)
chr8 (58-154)||(39474637-39474733)
chr8 (58-153)||(6471781-6471877)
chr8 (58-145)||(41353820-41353908)
chr8 (58-153)||(42945353-42945449)
chr8 (58-153)||(44664599-44664695)
chr8 (8-79)||(4405976-4406047)
chr8 (8-93)||(7306440-7306525)
chr8 (8-109)||(11674949-11675050)
chr8 (58-146)||(11761931-11762020)
[»] chr1 (62 HSPs)
chr1 (8-147)||(46899102-46899242)
chr1 (8-147)||(46899847-46899987)
chr1 (8-153)||(5734952-5735098)
chr1 (8-108)||(47999164-47999264)
chr1 (8-109)||(6367848-6367949)
chr1 (8-109)||(183262-183363)
chr1 (8-81)||(1103775-1103848)
chr1 (8-109)||(26024678-26024779)
chr1 (8-109)||(48779405-48779506)
chr1 (8-109)||(49723012-49723113)
chr1 (7-109)||(42248757-42248859)
chr1 (8-109)||(1841745-1841845)
chr1 (8-81)||(4960823-4960896)
chr1 (8-81)||(13914109-13914182)
chr1 (8-109)||(30711613-30711714)
chr1 (8-160)||(32132345-32132498)
chr1 (8-109)||(32917546-32917647)
chr1 (8-81)||(36694323-36694396)
chr1 (8-81)||(36710424-36710497)
chr1 (8-81)||(40210411-40210484)
chr1 (8-149)||(5734051-5734192)
chr1 (8-81)||(17661893-17661965)
chr1 (8-77)||(37578233-37578302)
chr1 (58-148)||(7371381-7371472)
chr1 (8-81)||(7821268-7821340)
chr1 (8-81)||(24009616-24009689)
chr1 (8-81)||(43759136-43759209)
chr1 (8-171)||(35040835-35040999)
chr1 (8-78)||(41099050-41099120)
chr1 (58-153)||(8898608-8898704)
chr1 (21-77)||(19017683-19017739)
chr1 (8-120)||(34849052-34849164)
chr1 (8-116)||(34850344-34850452)
chr1 (58-153)||(35038546-35038642)
chr1 (58-153)||(40714535-40714631)
chr1 (48-116)||(42533092-42533160)
chr1 (8-112)||(48691189-48691293)
chr1 (8-146)||(17691260-17691398)
chr1 (23-109)||(23209417-23209503)
chr1 (8-153)||(49955388-49955534)
chr1 (8-77)||(19322933-19323002)
chr1 (8-77)||(19323210-19323279)
chr1 (8-81)||(35473672-35473745)
chr1 (58-153)||(28324895-28324991)
chr1 (58-153)||(31058296-31058392)
chr1 (57-151)||(13295225-13295320)
chr1 (58-148)||(49955591-49955682)
chr1 (111-145)||(20760752-20760786)
chr1 (111-148)||(8898761-8898798)
chr1 (111-148)||(17189099-17189136)
chr1 (8-109)||(24905208-24905309)
chr1 (8-116)||(13300183-13300291)
chr1 (111-143)||(30326641-30326673)
chr1 (111-146)||(50062348-50062383)
chr1 (58-143)||(45750091-45750177)
chr1 (8-74)||(48692335-48692401)
chr1 (48-109)||(14879257-14879318)
chr1 (111-148)||(28325048-28325085)
chr1 (8-109)||(34464490-34464591)
chr1 (48-81)||(35152657-35152690)
chr1 (48-81)||(40772786-40772819)
chr1 (111-148)||(45749987-45750024)
[»] chr6 (37 HSPs)
chr6 (8-116)||(681007-681115)
chr6 (8-147)||(13379729-13379869)
chr6 (8-142)||(20651899-20652034)
chr6 (8-116)||(679907-680015)
chr6 (8-147)||(20651051-20651191)
chr6 (8-109)||(11434843-11434944)
chr6 (8-109)||(21627754-21627855)
chr6 (8-109)||(30337704-30337805)
chr6 (8-109)||(30726045-30726146)
chr6 (8-109)||(30804147-30804248)
chr6 (8-109)||(33517820-33517921)
chr6 (8-81)||(12080950-12081023)
chr6 (8-116)||(8090206-8090314)
chr6 (8-75)||(3059576-3059643)
chr6 (8-78)||(11393121-11393191)
chr6 (8-164)||(8089484-8089641)
chr6 (8-109)||(17734237-17734338)
chr6 (8-81)||(33647265-33647338)
chr6 (58-153)||(31407117-31407213)
chr6 (8-114)||(15116513-15116619)
chr6 (8-153)||(22503013-22503159)
chr6 (8-114)||(26463220-26463326)
chr6 (8-116)||(12407549-12407657)
chr6 (58-153)||(15913787-15913883)
chr6 (8-116)||(28498304-28498412)
chr6 (58-153)||(7160895-7160991)
chr6 (58-153)||(7905482-7905578)
chr6 (8-116)||(12408450-12408558)
chr6 (58-153)||(21836122-21836217)
chr6 (111-153)||(12065365-12065407)
chr6 (58-116)||(29810715-29810773)
chr6 (8-107)||(15115380-15115479)
chr6 (58-148)||(21836274-21836365)
chr6 (58-148)||(22502865-22502956)
chr6 (8-42)||(11436009-11436043)
chr6 (111-148)||(7905388-7905425)
chr6 (111-148)||(31407023-31407060)
[»] chr5 (53 HSPs)
chr5 (8-163)||(11741748-11741904)
chr5 (8-109)||(6301584-6301685)
chr5 (8-109)||(21265184-21265285)
chr5 (8-81)||(5994203-5994276)
chr5 (8-109)||(6301829-6301930)
chr5 (8-109)||(11762003-11762104)
chr5 (8-81)||(14194464-14194537)
chr5 (8-109)||(16156896-16156997)
chr5 (8-109)||(28269463-28269564)
chr5 (8-109)||(38475074-38475175)
chr5 (8-109)||(39453585-39453686)
chr5 (8-147)||(21257408-21257548)
chr5 (8-109)||(186705-186806)
chr5 (8-109)||(6150706-6150807)
chr5 (8-109)||(11047723-11047823)
chr5 (8-109)||(17202685-17202786)
chr5 (8-81)||(19892349-19892422)
chr5 (8-109)||(20814177-20814277)
chr5 (8-81)||(27587429-27587502)
chr5 (8-109)||(29646403-29646504)
chr5 (8-81)||(35920269-35920342)
chr5 (8-109)||(43159100-43159201)
chr5 (8-84)||(37991240-37991316)
chr5 (8-78)||(35512431-35512501)
chr5 (8-109)||(3528914-3529015)
chr5 (8-109)||(5024060-5024161)
chr5 (8-81)||(8322718-8322791)
chr5 (8-77)||(13963147-13963216)
chr5 (8-77)||(16083261-16083330)
chr5 (8-109)||(32242528-32242628)
chr5 (8-107)||(11740728-11740827)
chr5 (8-74)||(19517928-19517994)
chr5 (8-109)||(28770910-28771011)
chr5 (10-78)||(27937096-27937164)
chr5 (111-166)||(22870363-22870417)
chr5 (8-81)||(38442381-38442454)
chr5 (8-73)||(42265776-42265841)
chr5 (58-153)||(20153157-20153253)
chr5 (30-109)||(13362290-13362369)
chr5 (22-78)||(10684255-10684311)
chr5 (64-151)||(22869702-22869790)
chr5 (8-67)||(18247404-18247463)
chr5 (35-78)||(24547258-24547301)
chr5 (111-153)||(17544287-17544329)
chr5 (111-148)||(17544193-17544230)
chr5 (111-148)||(20153063-20153100)
chr5 (111-148)||(22298687-22298724)
chr5 (8-72)||(20840760-20840824)
chr5 (23-79)||(37992604-37992660)
chr5 (7-54)||(24547217-24547264)
chr5 (58-140)||(33871590-33871673)
chr5 (111-145)||(21287904-21287938)
chr5 (8-109)||(41930771-41930872)
[»] scaffold0031 (1 HSPs)
scaffold0031 (8-105)||(69255-69352)
[»] scaffold0020 (1 HSPs)
scaffold0020 (8-109)||(139927-140028)
[»] scaffold0775 (2 HSPs)
scaffold0775 (8-146)||(5003-5142)
scaffold0775 (8-145)||(6227-6365)
[»] scaffold0707 (1 HSPs)
scaffold0707 (8-81)||(6393-6466)
[»] scaffold0005 (1 HSPs)
scaffold0005 (8-81)||(37605-37678)
[»] scaffold0075 (1 HSPs)
scaffold0075 (8-109)||(14470-14571)
[»] scaffold0328 (2 HSPs)
scaffold0328 (8-153)||(11379-11525)
scaffold0328 (58-148)||(11231-11322)
[»] scaffold0128 (1 HSPs)
scaffold0128 (8-144)||(19898-20035)
[»] scaffold0771 (1 HSPs)
scaffold0771 (8-151)||(961-1105)
[»] scaffold0388 (2 HSPs)
scaffold0388 (58-145)||(12486-12574)
scaffold0388 (111-148)||(12384-12421)
[»] scaffold0006 (2 HSPs)
scaffold0006 (58-153)||(221881-221976)
scaffold0006 (58-148)||(222033-222124)
[»] scaffold0220 (1 HSPs)
scaffold0220 (58-116)||(24625-24683)
[»] scaffold0042 (1 HSPs)
scaffold0042 (58-143)||(12029-12115)
[»] scaffold0007 (1 HSPs)
scaffold0007 (8-77)||(2059-2128)
[»] scaffold0008 (1 HSPs)
scaffold0008 (58-116)||(239830-239888)


Alignment Details
Target: chr7 (Bit Score: 452; Significance: 0; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 8 - 718
Target Start/End: Original strand, 13384543 - 13385276
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||| ||||||| |||| |||||||| || ||||||||  ||||||| | ||||| |||||||||||||||| |  || || ||||||| | ||| ||||    
T  13384543 aaaatttggtccctgtaatcgctaatcctagcaaactacccttgcaaacgttaatcatttaaaatttcgtccctacactcacttaattactcccatgtca 13384642  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattcttcttcttcctatgaactcagaatgatctgaacctagaatccagaataaac 206  Q
     |  |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  13384643 tcaaattaacaaaatgacatgggaatggacaaaaataccctcatcatccttcttcttcctatgaacccagaacgatctgaacctagaatccagaataaac 13384742  T
Q  207 aattctcaattttgatgtagtaaacttcaacttctcaatccaaaactcattaatccgccacaaataaccaaaatcatatccactgtgaaaatttatccaa 306  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  13384743 aattctcaatttcgaagtagtaaacttcaacttctcaatccaaaactcattaatccgcca-aaataaccaaaatcatatccactatgaaaagttatccaa 13384841  T
Q  307 tgaacattatcattcaaaacaatctcagatgacatcaaaagctcaccgaaacgcccagcatcgataccatcttgattattcttcctgaaatcaattccac 406  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  13384842 tgagcattatcattcaaaacaatcccagatgacatcaaaagctcaccgaaacgcctagcatcgataccatcttgattattcttcttgaaatcaattccac 13384941  T
Q  407 tttgtctcaaaagctcaattgaatcgtttgcaaaaacatcctcattaacgttaaattctctaaaattaaattactagatacaattgaacaagcttc---- 502  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| |||||| | || ||||||||||| ||||        
T  13384942 tttgtctcaaaagctcaattgaatcatttgcgaaaacatcctcattaacattaaattctctaaaattgaattaccatatgcaattgaacaaacttcaaca 13385041  T
Q  503 ------------------aacatatcaacattatcttttagggtttggtaatgataatcataattgctcctgaaattcccaacaggtcgaagaacaatac 584  Q
                      ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  13385042 taattcaacaagcttcaaaacatatcaacattatcttttagggtttggtaatgataatcataactgctcctgaaattcccaacatgtcgaagaacaatac 13385141  T
Q  585 cagggaatgaaaccctaaaagcaaaagaagaa-gacaacactaataacaaagaaatggaatgattaatcgaaacggtaacggcggtgttacgaaaagtaa 683  Q
     |||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||    
T  13385142 tagggaatgaaaccctaaaagcaaaagaagaacaacaacactaataacaaagaaatgaaatgatttatcgaaacggtaacggtggtgttacgaaaagtaa 13385241  T
Q  684 cacaggtgggaaacaagattcacacctcctaaccc 718  Q
    |||||||||||||||||||||||||||||||||||    
T  13385242 cacaggtgggaaacaagattcacacctcctaaccc 13385276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 8 - 165
Target Start/End: Complemental strand, 18087725 - 18087568
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||  |||| |||||||| |||||||| ||| |||||||| |||||| ||||||||||| |||| | |||||| ||||| | ||||||||||    
T  18087725 aaaaattggtcactgtaatcgctaatccttgcaaaatagccttgcaattattaatcatttaaaattttgtcccttaacccacttaatgactgccacgtca 18087626  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattcttcttcttcc 165  Q
     |  |||||||||||| |||||||||||||||||||||||||||| |||||||| ||||    
T  18087625 tcaaattagcaaaatggcatgggaatggacaaaaataccctcatc-ttcttctttttcc 18087568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 17885669 - 17885770
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||| ||||| |||||||||||| ||||||||||||||| ||||||||||||||||||  ||||||||||| | ||||||||||    
T  17885669 aaaaattggtccctgtattctctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacccagttaatcactgccacgtca 17885768  T
Q  108 ct 109  Q
    ||    
T  17885769 ct 17885770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 43124539 - 43124400
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||| |||||||| ||| |||||||  |||||| |  ||||| |||||||||||||||| |   |||||||||| | ||||||||||    
T  43124539 aaaaattggtccctgtaatcgctaatccttacaaactacccttgcattgtttaatcatttaaaatttcgtccctattcccagttaatcactgccacgtca 43124440  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccc 146  Q
     |  ||||||||||||||||||||||||||||||||||||    
T  43124439 tcaaattagcaaaatgacatgggaatggacaaaaataccc 43124400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 10936181 - 10936108
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  10936181 aaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctt 10936108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 17102376 - 17102275
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||||||||||||||||| || ||||||||| ||||||||||||||| ||||||||||| ||||||  ||| | ||||| | ||||||||||    
T  17102376 aaaaattggtccatgtattcgctaatcctagcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtca 17102277  T
Q  108 ct 109  Q
    ||    
T  17102276 ct 17102275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 148
Target Start/End: Original strand, 18086330 - 18086471
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||  || |||| |||||||| ||| |||||||| |||||| | |||||||||||||| |  ||||||||||||| ||||| ||||    
T  18086330 aaaaattggtccctgtaaacgataatccttgcaaattagccttgcaattattaatcacttaaaatttcgtcccttgacccagttaattactgccatgtca 18086429  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
     |  |||||||||||| ||||| |||||||||||||||||||    
T  18086430 tcaaattagcaaaatggcatggaaatggacaaaaataccctc 18086471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 27992095 - 27991994
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||  ||| | ||||| | ||||||||||    
T  27992095 aaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtca 27991996  T
Q  108 ct 109  Q
    ||    
T  27991995 ct 27991994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 148
Target Start/End: Original strand, 33808364 - 33808505
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||  ||||||||||||| |||||||| ||| |||||| || ||||| |||||||||||||||| |  |||||||||||   |||| |||||    
T  33808364 aaaaattggtctctgtattcgctaatccttgcaaattagtcttgcattctttaatcatttaaaatttcgtccattgacccagttaatcgctgccccgtca 33808463  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
     |  ||||||||||||  ||||||||||||||||||||||||    
T  33808464 tcaaattagcaaaatgggatgggaatggacaaaaataccctc 33808505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 47945398 - 47945554
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||| ||||||||||||||| ||||||||||||  |||||||||||||| ||||||||||||||         || ||||| |  ||||| |||    
T  47945398 aaaaattggttcatgtattcgctaatccttgcaaactagcattgcaatcattaatcatttaaaatttcgt---------cacttaatgaccgccacatca 47945488  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattcttcttcttcctatgaac 172  Q
     |  |||| ||||||| ||| |||||||||||||||||||||||||| |||||||||||| |||||    
T  47945489 tcaaattaacaaaatggcataggaatggacaaaaataccctcatcatccttcttcttcctttgaac 47945554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 47950828 - 47950984
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||| ||||||||||||||| ||||||||||||  |||||||||||||| ||||||||||||||         || ||||| |  ||||| |||    
T  47950828 aaaaattggttcatgtattcgctaatccttgcaaactagcattgcaatcattaatcatttaaaatttcgt---------cacttaatgaccgccacatca 47950918  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattcttcttcttcctatgaac 172  Q
     |  |||| ||||||| ||| |||||||||||||||||||||||||| |||||||||||| |||||    
T  47950919 tcaaattaacaaaatggcataggaatggacaaaaataccctcatcatccttcttcttcctttgaac 47950984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 57 - 164
Target Start/End: Original strand, 4226215 - 4226323
Alignment:
Q  57 attaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattc 155  Q
    |||||| ||||||||||||||||||   ||| |||||| | |||||||||| |  |||||||||||| |||||||||||||||||||||||||||||| |    
T  4226215 attaatcatttaaaatttcgtccttcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcatcatcc 4226314  T
Q  156 ttcttcttc 164  Q
    |||||||||    
T  4226315 ttcttcttc 4226323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 27396670 - 27396737
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttc 75  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||    
T  27396670 aaaaattggtccatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttc 27396737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 40380071 - 40380000
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcc 79  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||||||||||||| ||||||||||||||||    
T  40380071 aaaaattggtccatgtattcgccaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 40380000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 2640219 - 2640320
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||| | ||||||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  2640219 aaaaattggtacctgtattcgctaatccttgcaaattagtcttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 2640318  T
Q  108 ct 109  Q
    ||    
T  2640319 ct 2640320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 24389172 - 24389099
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||||||||||||||||| ||||||||||||  |||||||||||||| ||||||||||| ||||||    
T  24389172 aaaaattggtccatgtattcgctaatccttgcaaactagcattgcaatcattaatcatttaaaattttgtcctt 24389099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 48788844 - 48788911
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttc 75  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||    
T  48788844 aaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 48788911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 3914524 - 3914458
Alignment:
Q  9 aaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttc 75  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||    
T  3914524 aaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 3914458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 6253827 - 6253754
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| ||||||||||||| ||||||||| || ||||||||||||||| ||||||||||| ||||||    
T  6253827 aaaaattggtccttgtattcgctaatccttgcaaacaagtcttgcaatcattaatcatttaaaatttagtcctt 6253754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 19204845 - 19204744
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||| |||||| |||||||| ||||||||||||  ||||||||||||||||||||||||||| || ||  ||| | ||||| | ||||||||||    
T  19204845 aaaaattggttcatgtaatcgctaatccttgcaaactagctttgcaatcattaattatttaaaatttcatcatttgaccaatttaatcactgccacgtca 19204746  T
Q  108 ct 109  Q
    ||    
T  19204745 ct 19204744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 28469051 - 28469124
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| | |||||||||||  ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  28469051 aaaaattggtccttatattcgctaatctttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctt 28469124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 42019638 - 42019707
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgt 77  Q
    |||||||||||||||||||||||||| ||||||||||||  ||| |||||||||| ||||||||||||||    
T  42019638 aaaaattggtccatgtattcgctaatccttgcaaactagctttgtaatcattaatcatttaaaatttcgt 42019707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 5457294 - 5457186
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||||||| |||| |||||||| ||  ||| ||||  ||||| |||||||||||||||| | | |||||||||| | ||||||||||    
T  5457294 aaaaattggtccttgtattcgttaatccttgcaaattaccctttcaatgtttaatcatttaaaatttcgtccctcatcccagttaatcactgccacgtca 5457195  T
Q  108 ctgattagc 116  Q
    |||||||||    
T  5457194 ctgattagc 5457186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 42362491 - 42362590
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||||||| |||| |||||||| ||  |||||| || ||||| |||||||||||||||||| ||||||||||||  |||||| ||||    
T  42362491 aaaaattggtccttgtattcgttaatccttgcaaattacccttgcattctttaatcatttaaaatttcgtcctttaacccagttaatcgttgccaggtca 42362590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 13386134 - 13386033
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| | ||||||||||| |||||||||||| ||||||||  ||||| |||||||||||  |||||  ||||||||||| | ||||| ||||    
T  13386134 aaaaattggtccctatattcgctaatccttgcaaactagccttgcaatgtttaatcatttaaaattttatcctttgacccagttaatcactgccatgtca 13386035  T
Q  108 ct 109  Q
    ||    
T  13386034 ct 13386033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 57 - 153
Target Start/End: Original strand, 45914614 - 45914711
Alignment:
Q  57 attaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    |||||| |||||||||||||||| |   |||  ||||| | |||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  45914614 attaatcatttaaaatttcgtccctcttcccgattaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcatcat 45914711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 25628569 - 25628665
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||||||  ||| | ||||| | |||||||||| |  |||||||||||| ||||||||||||||||||||||||| ||||    
T  25628569 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcat 25628665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 6571332 - 6571262
Alignment:
Q  10 aaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||||| ||||| ||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  6571332 aaattggtc-atgtactcgttaattcttgcaaactagccttgcaattattaatcatttaaaatttcgtcctt 6571262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 17886877 - 17886778
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||| |||||||||||| |||| |||||||||||  |||||||  |||||| |||||||||||||||| |  ||||| ||||| | ||||||||||    
T  17886877 aaaaattgatccatgtattcgttaatccttgcaaactacccttgcaaatattaatcatttaaaatttcgtcccttgacccacttaatcactgccacgtca 17886778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 22871351 - 22871450
Alignment:
Q  10 aaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtcact 109  Q
    |||||| ||| |||| |||||||| ||||||||| || |||||||| |||||| ||||||||||||||||||  ||| | ||||| | ||||||||||||    
T  22871351 aaattgatccctgtaatcgctaatccttgcaaaccagtcttgcaattattaatcatttaaaatttcgtcctttgaccaatttaatcactgccacgtcact 22871450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 47558175 - 47558228
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcattcttcttcttc 164  Q
    |||||||||||| |||||||||||| ||||||||||||||||| ||||||||||    
T  47558175 attagcaaaatgtcatgggaatggataaaaataccctcatcatccttcttcttc 47558228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 5455868 - 5456012
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||| ||||| |||||| | |   ||| |||   ||||| |||||||||||| ||| |  ||||| ||||||| |||||| |||    
T  5455868 aaaaattggtccctgtattctctaatccttgcatattgtcctttcaaagtttaatcatttaaaatttcatccctacacccacttaattactgccacatca 5455967  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatc 151  Q
     |  |||||||||||| |||| |||||||||||||||||||||||    
T  5455968 tcaaattagcaaaatggcatgagaatggacaaaaataccctcatc 5456012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 156
Target Start/End: Original strand, 12228476 - 12228575
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattct 156  Q
    ||||| ||||||||||||||| || |||||| ||||| | || ||||||| |  |||| ||||||| |||| ||||||||||||||||||||||| ||||    
T  12228476 ttaatcatttaaaatttcgtcgtttaacccacttaatgactgtcacgtcatcaaattaacaaaatggcatgagaatggacaaaaataccctcatctttct 12228575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 147
Target Start/End: Complemental strand, 23058764 - 23058674
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccct 147  Q
    ||||| ||||||||||||||| ||  ||| | ||||||| |||||||||| |  |||| ||||||| ||||||||||||||||||||||||    
T  23058764 ttaatcatttaaaatttcgtcatttgaccaacttaattactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccct 23058674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 32934629 - 32934587
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  32934629 attagcaaaatgacatgggaatggacaaaaataccctcgtcat 32934587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 42731806 - 42731705
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||| ||| | ||| ||||||| ||||||| ||||  ||||||| |||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  42731806 aaaaattgatccctatatccgctaatccttgcaagctagctttgcaattattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 42731707  T
Q  108 ct 109  Q
    ||    
T  42731706 ct 42731705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 42618246 - 42618150
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||||||  ||| | ||||| | || ||||||| |  |||||||||||| |||||||||||||||||||| |||| ||||    
T  42618246 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaatatcctcgtcat 42618150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 57 - 163
Target Start/End: Complemental strand, 12644143 - 12644036
Alignment:
Q  57 attaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattc 155  Q
    |||||| |||||||||||||||| |   ||| |||||| | |||||||||| |  |||||||||||| |||| ||||| |||||||| |||||||||| |    
T  12644143 attaatcatttaaaatttcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgagaatgaacaaaaatgccctcatcatcc 12644044  T
Q  156 ttcttctt 163  Q
    ||| ||||    
T  12644043 ttcatctt 12644036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 18856041 - 18855902
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||| ||| ||||  | ||||| ||  |||||||   ||||| |||||||||||||||| | |||||| ||||| | || |||||||    
T  18856041 aaaaattggtccctgtaatcgttaatcttggcaaattacccttgcaaagtttaatcatttaaaatttcgtcccttaacccacttaatgactgacacgtca 18855942  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccc 146  Q
     |  |||||||||||  |||||||| ||||||||||||||    
T  18855941 tcaaattagcaaaatagcatgggaaaggacaaaaataccc 18855902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 32053184 - 32053251
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttc 75  Q
    |||||| ||||| | ||| || |||| |||||||||||| ||||||||||||||| ||||||||||||    
T  32053184 aaaaatcggtccctatatacgataatccttgcaaactagccttgcaatcattaatcatttaaaatttc 32053251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 32298818 - 32298869
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcatt 59  Q
    ||||| |||||| ||||||||||||| |||||||||||| ||||||||||||    
T  32298818 aaaaactggtccctgtattcgctaatccttgcaaactagtcttgcaatcatt 32298869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 150
Target Start/End: Complemental strand, 32688565 - 32688462
Alignment:
Q  48 cttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccc 146  Q
    |||||||  |||||| |||||||||||||||| |  ||||| ||||| | |||||||||| |  |||||||||||  ||||| ||| |||||||||||||    
T  32688565 cttgcaaatattaatcatttaaaatttcgtcccttgacccacttaataactgccacgtcatcaaattagcaaaattgcatggaaatagacaaaaataccc 32688466  T
Q  147 tcat 150  Q
    ||||    
T  32688465 tcat 32688462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 47559022 - 47558983
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcat 150  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  47559022 attagcaaaatgacatggaaatggacaaaaataccctcat 47558983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 10600230 - 10600188
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    |||||||||||| ||||||||||||||||||||||||| ||||    
T  10600230 attagcaaaatggcatgggaatggacaaaaataccctcgtcat 10600188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 42363772 - 42363671
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||||||| ||||  ||||||| ||  |||||||   ||||| | | |||||||||||| |||||||| ||||| ||||||||||||    
T  42363772 aaaaattggtcc-tgtattcgttaatctttgcaaattatccttgcaaattttaataactcaaaatttcgtccctgaacccatttaatgattgccacgtca 42363674  T
Q  108 ctg 110  Q
    |||    
T  42363673 ctg 42363671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 148
Target Start/End: Original strand, 32068137 - 32068278
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| |||| |||| |||||||| || ||||  ||  |||||| |  ||||| |||||||||||||| |||  ||| | ||||| | ||||| ||||    
T  32068137 aaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtactttgaccaacttaatcaatgccaagtca 32068236  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
     |  |||||||||||| |||||||| ||||||||||||||||    
T  32068237 tcaaattagcaaaatggcatgggaaaggacaaaaataccctc 32068278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 42618056 - 42618093
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    |||||||||||| |||||||||||||||||||||||||    
T  42618056 attagcaaaatggcatgggaatggacaaaaataccctc 42618093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 43266651 - 43266514
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| ||||||||| |||||||||||  |||  ||  |||||| |  ||||| ||||||||||||||||||  ||| | ||||| | | | | ||||    
T  43266651 aaaaattagtccatgtaatcgctaattctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactactaagtca 43266552  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaatac 144  Q
     |  ||||||||||||||||| ||||||||||||||||    
T  43266551 tcaaattagcaaaatgacatgagaatggacaaaaatac 43266514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 47946861 - 47946792
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgt 77  Q
    |||||| ||||  |||||||||||   ||| |||| ||| ||||||||||||||||||||||||||||||    
T  47946861 aaaaatcggtctctgtattcgctatcccttccaaattagtcttgcaatcattaattatttaaaatttcgt 47946792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 47952291 - 47952222
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgt 77  Q
    |||||| ||||  |||||||||||   ||| |||| ||| ||||||||||||||||||||||||||||||    
T  47952291 aaaaatcggtctctgtattcgctatcccttccaaattagtcttgcaatcattaattatttaaaatttcgt 47952222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 23058574 - 23058614
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatc 151  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
T  23058574 attagcaaaatgtcatgggaatggacaaaaatacactcatc 23058614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 32068431 - 32068335
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||| ||  ||| | ||||| | |||||||||| |  |||||||||||| ||||||||| |||||||| |||||| ||||    
T  32068431 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaagaccctcgtcat 32068335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 46205644 - 46205548
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||||||  ||| | ||||| | |  ||||||| |  ||||| |||||| ||||||||||||||||||||||||| ||||    
T  46205644 ttaatcatttaaaatttcgtcctttgaccaacttaatcactatcacgtcatcaaattaggaaaatggcatgggaatggacaaaaataccctcgtcat 46205548  T

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Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 148
Target Start/End: Complemental strand, 25628813 - 25628722
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    ||||| ||||||||||||||||||  ||| | ||||| | || || |||| |  |||||||||||| ||||||||||||||||| |||||||    
T  25628813 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaactaccctc 25628722  T

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Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 32934439 - 32934530
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    ||||| ||||||||||||||||||  ||| | ||||| | | ||| |||| |  |||||||||||| ||| |||||||||||||||||||||    
T  32934439 ttaatcatttaaaatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagcaaaatggcataggaatggacaaaaataccctc 32934530  T

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Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 25453409 - 25453367
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    |||||||||||| |||||||||||||||||||| |||| ||||    
T  25453409 attagcaaaatggcatgggaatggacaaaaatatcctcgtcat 25453367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 45010991 - 45010921
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtc 78  Q
    |||||||||| ||||||||||||||| |||||||  ||  |||||| |  ||||| |||||||||||||||    
T  45010991 aaaaattggttcatgtattcgctaatccttgcaatttacccttgcattgtttaatcatttaaaatttcgtc 45010921  T

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Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 27138222 - 27138185
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  27138222 attaacaaaataacatgggaatggacaaaaataccctc 27138185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 37657197 - 37657164
Alignment:
Q  48 cttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||||||||||| ||||||||||||||||||    
T  37657197 cttgcaatcattaatcatttaaaatttcgtcctt 37657164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 251 - 547
Target Start/End: Complemental strand, 35716982 - 35716687
Alignment:
Q  251 actcattaatccgccacaaataaccaaaatcatatccactgtgaaaatttatccaatgaacattatcattcaaaacaatctcagatgacatcaaaagctc 350  Q
    |||||||||||  ||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  35716982 actcattaatctaccacaaataaccaaaatcatatcaactatgaaaagttatccaatgaacattatcattcaaaacaatcccagatgacatcaaaaggtc 35716883  T
Q  351 accgaaacgcccagcatcgataccatcttgattattcttcctgaaatcaattccactttgtctcaaaagctcaattgaatcgtttgcaaaaacatcctca 450  Q
    |||||||| || |||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  35716882 accgaaacaccaagcatcgataccatcttt-ttattcttcttgaaatcaattccactttgtctcaaaagctcaattgaatcatttgcaaaagcatcctca 35716784  T
Q  451 ttaacgttaaattctctaaaattaaattactagatacaattgaacaagcttcaacatatcaacattatcttttagggtttggtaatgataatcataa 547  Q
    ||||| |||||||||||||| || |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35716783 ttaacattaaattctctaaacttgaattaccaggtacaattgaacaagcttcaacatatcaacattatcttttagggtttggtaatgataatcataa 35716687  T

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Target: chr3; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 547 - 718
Target Start/End: Complemental strand, 35713090 - 35712918
Alignment:
Q  547 attgctcctgaaattcccaacaggtcgaagaacaataccagggaatgaaaccctaaaagcaaaagaagaaga-caacactaataacaaagaaatggaatg 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| || |    
T  35713090 attgctcctgaaattcccaacaggtcgaagaacaataccagggaatgaaaccctaaaagcaaaagaagaacaacaacactaataacaaagaaatgaaagg 35712991  T
Q  646 attaatcgaaacggtaacggcggtgttacgaaaagtaacacaggtgggaaacaagattcacacctcctaaccc 718  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35712990 attgatcgaaacggtaacggcggtgttacgaaaagtaacacaggtgggaaacaagattcacacctcctaaccc 35712918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 41558269 - 41558138
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||  ||||||||||||||||| |||||||| ||| ||||||||||||||| |||||||||||||||||||| |||||||||||| |||||| |||    
T  41558269 aaaaattaatccatgtattcgctaatccttgcaaattagtcttgcaatcattaatcatttaaaatttcgtccttgagcccagttaattactgccacatca 41558170  T
Q  108 -ctgattagcaaaatgacatgggaatggacaa 138  Q
     |  |||| |||||||  ||||||||||||||    
T  41558169 tcaaattatcaaaatggtatgggaatggacaa 41558138  T

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Target: chr3; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 19740964 - 19741065
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||| |||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| ||||||||||||    
T  19740964 aaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaatttaatcattgccacgtca 19741063  T
Q  108 ct 109  Q
    ||    
T  19741064 ct 19741065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 53757110 - 53757032
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacc 86  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||||| |||||||||||||||||| ||||    
T  53757110 aaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatcattaatcatttaaaatttcgtcctttaacc 53757032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 23458020 - 23458121
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| |||||||| |||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  23458020 aaaaattggtccctgtattcgctaatccttgcaaactagccttgcaataattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 23458119  T
Q  108 ct 109  Q
    ||    
T  23458120 ct 23458121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 33689423 - 33689523
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||  ||| | ||||| | ||||||||||    
T  33689423 aaaaattggtc-atgtattcgctaattcttgcaaactagccttgcaatcattaatcatttaaaattttgtcctttgaccaacttaatcactgccacgtca 33689521  T
Q  108 ct 109  Q
    ||    
T  33689522 ct 33689523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 36417729 - 36417802
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  36417729 aaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctt 36417802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 40758497 - 40758424
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  40758497 aaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctt 40758424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 36418075 - 36418002
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||| | ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  36418075 aaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctt 36418002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 46475155 - 46475067
Alignment:
Q  21 tgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtcact 109  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||||    
T  46475155 tgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcact 46475067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 3849072 - 3849147
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttga 83  Q
    |||||||||||| |||||||| |||| |||||||||||| | ||||||||||||| ||||||||||||||||||||    
T  3849072 aaaaattggtccctgtattcgttaatccttgcaaactagccctgcaatcattaatcatttaaaatttcgtccttga 3849147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 9367782 - 9367883
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||| |||||  ||||||||||||| |||||||||||| |||||||| |||||| |||||||||||||||| | | |||| ||||| | ||||||||||    
T  9367782 aaaaaatggtctctgtattcgctaatccttgcaaactagccttgcaattattaatcatttaaaatttcgtccctcatcccaattaatcactgccacgtca 9367881  T
Q  108 ct 109  Q
    ||    
T  9367882 ct 9367883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 164
Target Start/End: Complemental strand, 9368688 - 9368531
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||| ||  |||| |||||||| ||  ||| || |  ||||| |||||||||||||| | | |||||| ||||| ||||||||||||    
T  9368688 aaaaattggtccctgtaatcattaatccttgcaaattactcttacattgtttaatcatttaaaatttcgttccttaacccacttaatgattgccacgtca 9368589  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattcttcttcttc 164  Q
     |  |||| ||||||| |||| ||||||||||||||||||||||| |||||| |||||    
T  9368588 tcaaattaacaaaatggcatgagaatggacaaaaataccctcatccttcttcatcttc 9368531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 270 - 347
Target Start/End: Complemental strand, 49023709 - 49023632
Alignment:
Q  270 ataaccaaaatcatatccactgtgaaaatttatccaatgaacattatcattcaaaacaatctcagatgacatcaaaag 347  Q
    ||||||||||||||| |||||||||||| | | ||||||||||||||||||||| |||||| | ||||||||||||||    
T  49023709 ataaccaaaatcataaccactgtgaaaagtaacccaatgaacattatcattcaacacaatccccgatgacatcaaaag 49023632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 41558049 - 41558140
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattg 99  Q
    |||||||||| | ||||||||||||| |||||| | ||  |||||||| |||||| |||||||||||||||  |||||||||||||||||||    
T  41558049 aaaaattggtacttgtattcgctaatccttgcacattaaccttgcaattattaatcatttaaaatttcgtcagtgaacccagttaattattg 41558140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 26463673 - 26463746
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||| ||| |||||||| |||| |||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  26463673 aaaaattgatccttgtattcggtaatccttgcaaattagtcttgcaatcattaatcatttaaaatttcgtcctt 26463746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 42343118 - 42343045
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||| |||||||||||||||||  ||||||| ||| |||||||| |||||| ||||||||||||||||||    
T  42343118 aaaaattgatccatgtattcgctaatctttgcaaattagtcttgcaatgattaatcatttaaaatttcgtcctt 42343045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 42855692 - 42855619
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||| |||||||||||||||||| |||||||||||| |||||| || ||||| |||||||||||| |||||    
T  42855692 aaaaattagtccatgtattcgctaatccttgcaaactagccttgcattctttaatcatttaaaatttcatcctt 42855619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 3469241 - 3469387
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| ||||||||| || ||||| || ||||  ||  |||||| |  ||||| ||||||||||||||||||  ||| | ||||| |  |||||||||    
T  3469241 aaaaattagtccatgtaatcactaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcacggccacgtca 3469340  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
     |  |||||||||||| ||||||||||||||||||||||||| ||||    
T  3469341 tcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcat 3469387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 57 - 146
Target Start/End: Complemental strand, 32717115 - 32717025
Alignment:
Q  57 attaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccc 146  Q
    |||||| |||||||||||||||| |   |||| ||||||| |||||||||| |  |||||||||||||||| |||||||||||||||||||    
T  32717115 attaatcatttaaaatttcgtccctcttcccaattaattactgccacgtcatcaaattagcaaaatgacataggaatggacaaaaataccc 32717025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 40788805 - 40788659
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| |||| |||| |||||||| || ||||  ||  |||||| |  |||||  |||||||||||||||||  ||| | ||||| | ||||||||||    
T  40788805 aaaaattagtccctgtaatcgctaatcctggcaatttactcttgcattgtttaatcttttaaaatttcgtcctttgaccaacttaatcactgccacgtca 40788706  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
     |  |||||||||||| ||||||||||||||||||||||||| ||||    
T  40788705 tcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcat 40788659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 43384655 - 43384569
Alignment:
Q  23 tattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtcact 109  Q
    |||||| |||| |||||||||||| ||||||||||||| | ||||||||||||||||||  ||| | ||||| | ||||||||||||    
T  43384655 tattcgttaatccttgcaaactagccttgcaatcattagtcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcact 43384569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 159
Target Start/End: Original strand, 6956345 - 6956442
Alignment:
Q  64 atttaaaatttcgtccttgaacccagtt-aattattgccacgtcactga-ttagcaaaatgacatgggaatggacaaaaataccctcatcattcttct 159  Q
    |||||||||||||||| |  ||||| || ||||| ||||||||||   | ||| |||||||||||||||||||||||||||||||||||||| |||||    
T  6956345 atttaaaatttcgtccctacacccactttaattactgccacgtcataaaattaacaaaatgacatgggaatggacaaaaataccctcatcatccttct 6956442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 13948821 - 13948965
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| ||||||||| ||||||||  | ||||  ||  |||||| |  ||||| ||||||||||||||||||  ||| | ||||| | || || ||||    
T  13948821 aaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgtcaagtca 13948920  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatc 151  Q
     |  |||||||||||| ||||||||||||||||||||||||||||    
T  13948921 tcaaattagcaaaatggcatgggaatggacaaaaataccctcatc 13948965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 29118873 - 29118777
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||||||  ||| | ||||| | |||||||||| |  |||||||||||| ||||||||| ||||||||||||||| ||||    
T  29118873 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcacattagcaaaatggcatgggaatagacaaaaataccctcgtcat 29118777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 29192948 - 29192894
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcattcttcttcttcct 166  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||    
T  29192948 attagcaaaatgacatgggaattgacaaaaataccctcatca-tcttcttcatcct 29192894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 35643942 - 35644033
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    ||||| ||||||||||||||||||  ||  | ||||| | |||||||||| |  |||||||||||| |||||||||||||||||||||||||    
T  35643942 ttaatcatttaaaatttcgtcctttgacaaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 35644033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 35759084 - 35759029
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcattcttcttcttcct 166  Q
    |||||||||||| |||| ||||||||||||||||||||||| | ||||||||||||    
T  35759084 attagcaaaatggcatgagaatggacaaaaataccctcatcttccttcttcttcct 35759029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 41422063 - 41422154
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    ||||| ||||||||||||||| ||  ||| | ||||| | || ||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  41422063 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 41422154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 1078627 - 1078729
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattct 156  Q
    ||||| |||||||||||||||| |  ||||| |||||||||| || |||| |  |||||||| ||| || |||||||||||||||||| |||||||| ||    
T  1078627 ttaatcatttaaaatttcgtccctacacccatttaattattgtcatgtcatcaaattagcaagatggcacgggaatggacaaaaatactctcatcatcct 1078726  T
Q  157 tct 159  Q
    |||    
T  1078727 tct 1078729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 3596390 - 3596348
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  3596390 attagcaaaatgacatgggaatggacaaaaataccctcgtcat 3596348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 52032229 - 52032327
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattc 155  Q
    ||||| ||||||||||||||||||  ||| | ||||| | | |||||||| |  |||| ||||||| ||||||||||||||||||||||||| ||||||    
T  52032229 ttaatcatttaaaatttcgtcctttgaccaacttaatcactaccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcgtcattc 52032327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 49946990 - 49947035
Alignment:
Q  225 agtaaacttcaacttctcaatccaaaactcattaatccgccacaaa 270  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||    
T  49946990 agtaaacttcaacttctcaacccaaaactaattaatccgccacaaa 49947035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 52032420 - 52032383
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    ||||||||||||||||||||||||||||||||||||||    
T  52032420 attagcaaaatgacatgggaatggacaaaaataccctc 52032383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 25108482 - 25108374
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||| ||||||| |||| | |||||| || |||||||   | ||||| | ||||| |||||||||||||||||| | | |||||||| | ||||||||||    
T  25108482 aaaatttggtccctgtaattgctaatcctggcaaactgtccctgcaaacgttaatcatttaaaatttcgtccttcatcacagttaatcactgccacgtca 25108383  T
Q  108 ctgattagc 116  Q
    |||||||||    
T  25108382 ctgattagc 25108374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 32306515 - 32306611
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||||||  ||| | ||||| | | |||||||| |  |||||||||||||| |||||||||||||||||| |||| ||||    
T  32306515 ttaatcatttaaaatttcgtcctttgaccaacttaatcactaccacgtcatcaaattagcaaaatgacttgggaatggacaaaaatatcctcgtcat 32306611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 40788565 - 40788605
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatc 151  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  40788565 attagcaaaatggcatgggaatggacaaaaataccctcatc 40788605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 43608765 - 43608717
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcattcttct 159  Q
    |||||||| ||| ||||| ||||||||||||||||||||||||||||||    
T  43608765 attagcaagatggcatggaaatggacaaaaataccctcatcattcttct 43608717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 3850514 - 3850443
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcc 79  Q
    |||||||||||| |||||||| |||| |||| |||||||   |||||||||||||  |||||||||||||||    
T  3850514 aaaaattggtccctgtattcgataatccttggaaactagctctgcaatcattaatcgtttaaaatttcgtcc 3850443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 29118629 - 29118720
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    ||||| ||||||||||||||||||  ||| | ||||| | || || |||| |  |||||||||||| |||||||||||||||||||||||||    
T  29118629 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 29118720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 57 - 151
Target Start/End: Original strand, 29192125 - 29192220
Alignment:
Q  57 attaattatttaaaatttcgtccttgaacccagttaattattgccacgtcact-gattagcaaaatgacatgggaatggacaaaaataccctcatc 151  Q
    |||||| |||||||||||||||| |   |||  ||||| | |||||||||| |  ||||||||||||||||| |||| ||||||||||||||||||    
T  29192125 attaatcatttaaaatttcgtccctcttcccgattaatcactgccacgtcattaaattagcaaaatgacatgagaattgacaaaaataccctcatc 29192220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 41988625 - 41988696
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcc 79  Q
    |||||||||||| ||||||| |||||||||||||| ||  |||||| || ||||| ||||||| ||||||||    
T  41988625 aaaaattggtccctgtattcactaattcttgcaaattactcttgcattctttaatcatttaaattttcgtcc 41988696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 146
Target Start/End: Complemental strand, 45279239 - 45279204
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccc 146  Q
    ||||||||||||||||||||||||||||||||||||    
T  45279239 attagcaaaatgacatgggaatggacaaaaataccc 45279204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 53856444 - 53856357
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaatt 95  Q
    |||||||||||| ||||||| ||||| ||||||||| |  | |||||| |||||| |||||||| || ||||||  ||||||||||||    
T  53856444 aaaaattggtccttgtattcactaatccttgcaaacaaaccctgcaattattaatcatttaaaaattggtccttctacccagttaatt 53856357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 153
Target Start/End: Original strand, 10294706 - 10294748
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  10294706 attagcaaaatgacatggaaatgtacaaaaataccctcatcat 10294748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 149
Target Start/End: Original strand, 32716394 - 32716432
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctca 149  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  32716394 attagcaaaatggcatgggaatggacaaaaataccctca 32716432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 3469481 - 3469444
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    |||||||||||| |||||||||||||||||||||||||    
T  3469481 attagcaaaatggcatgggaatggacaaaaataccctc 3469444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 41989571 - 41989510
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcattcttcttcttcctatgaac 172  Q
    |||||||||||| |||| ||||||||||||| ||| ||||| | |||||||||||| |||||    
T  41989571 attagcaaaatggcatgagaatggacaaaaacaccttcatcttccttcttcttcctttgaac 41989510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 29686032 - 29686128
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| |||||||||||||| |||  ||| | || || | |||||||||| |  |||||||||||| |||||||||||| |||||||||||| ||||    
T  29686032 ttaatcatttaaaatttcgttctttgaccaacttgatcactgccacgtcatcaaattagcaaaatggcatgggaatggagaaaaataccctcgtcat 29686128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 9294013 - 9294100
Alignment:
Q  22 gtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtcact 109  Q
    |||||||||||| |||||||||||  |||  |||||||||| ||||||||||| ||| ||  ||| | ||||| | ||||||||||||    
T  9294013 gtattcgctaatccttgcaaactaatcttataatcattaatcatttaaaattttgtcttttgaccaacttaatcactgccacgtcact 9294100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 53856056 - 53856143
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaatt 95  Q
    |||||||||||| || |||| ||||||||||||||| |  | |||||| |||||| |||||||| || ||||||  || |||||||||    
T  53856056 aaaaattggtccttgcattcactaattcttgcaaacaaaccctgcaattattaatcatttaaaaattggtccttctactcagttaatt 53856143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 147
Target Start/End: Complemental strand, 37778608 - 37778518
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccct 147  Q
    ||||| |||||||||||| |||||  ||| | ||||| | |||||||||| |  |||||||||||| |||| |||| ||||||||||||||    
T  37778608 ttaatcatttaaaatttcatcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgagaatagacaaaaataccct 37778518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 47551534 - 47551680
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| |||| |||| |||||||| || ||||  ||  |||||| |  ||||| |||||||||||| |||||  ||| | ||||| | |||||| |||    
T  47551534 aaaaattagtccctgtaatcgctaatactggcaatttacccttgcattgtttaatcatttaaaatttcatcctttgaccaacttaatcactgccacatca 47551633  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
     |  |||||||||||| ||||| ||||||||||| ||||||| ||||    
T  47551634 tcaaattagcaaaatggcatggaaatggacaaaattaccctcgtcat 47551680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 10307656 - 10307619
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    |||||||||||  |||||||||||||||||||||||||    
T  10307656 attagcaaaattgcatgggaatggacaaaaataccctc 10307619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 29686222 - 29686185
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  29686222 attagcaaaatggcatggaaatggacaaaaataccctc 29686185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 35712085 - 35712118
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaa 41  Q
    |||||||||||||||||||||||||| |||||||    
T  35712085 aaaaattggtccatgtattcgctaatccttgcaa 35712118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 36314339 - 36314440
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| |||| |||| | |||||| || ||||  ||| ||||||||  ||||| ||||||||||| ||||||| ||| | ||||| | ||||||||||    
T  36314339 aaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttggtccttggaccaacttaatcactgccacgtca 36314438  T
Q  108 ct 109  Q
    ||    
T  36314439 ct 36314440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 48322418 - 48322519
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| |||| |||| | |||||| || ||||  ||| ||||||||  ||||| ||||||||||| ||||||| ||| | ||||| | ||||||||||    
T  48322418 aaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttggtccttggaccaacttaatcactgccacgtca 48322517  T
Q  108 ct 109  Q
    ||    
T  48322518 ct 48322519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 55052360 - 55052421
Alignment:
Q  48 cttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtcact 109  Q
    ||||||||||||||| ||||||||||| ||||||  ||| | ||||| | ||||||||||||    
T  55052360 cttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcact 55052421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 176; Significance: 2e-94; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 266 - 489
Target Start/End: Original strand, 816746 - 816969
Alignment:
Q  266 acaaataaccaaaatcatatccactgtgaaaatttatccaatgaacattatcattcaaaacaatctcagatgacatcaaaagctcaccgaaacgcccagc 365  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  816746 acaaataaccaaaatcatatccactatgaaaagttatccaatgaacattatcattcaaaacaatcccagatgacatcaaaagctcaccgaaacgcctagc 816845  T
Q  366 atcgataccatcttgattattcttcctgaaatcaattccactttgtctcaaaagctcaattgaatcgtttgcaaaaacatcctcattaacgttaaattct 465  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||    
T  816846 atcgataccatcttcattattcttcttgaaatcaattccactttgtctcaaaagctcaattgaatcatttgcaaaaacatcctcgttaacattaaattct 816945  T
Q  466 ctaaaattaaattactagatacaa 489  Q
    |||||||| |||| | ||||||||    
T  816946 ctaaaattgaattgccagatacaa 816969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 487 - 592
Target Start/End: Original strand, 817029 - 817134
Alignment:
Q  487 caattgaacaagcttcaacatatcaacattatcttttagggtttggtaatgataatcataattgctcctgaaattcccaacaggtcgaagaacaatacca 586  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  817029 caattgaataagctttaacatatcaacattatcttttagggtttggtaatgataatcataattgctcttgaaattcccaacaggtcgaagaacaatacca 817128  T
Q  587 gggaat 592  Q
    ||||||    
T  817129 gggaat 817134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 147360 - 147500
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||| |||| ||| |||| ||||||| ||||||||||    
T  147360 aaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaataatttaaaattttgtccctgagcccaattaattactgccacgtca 147459  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccct 147  Q
     |  |||||||||||| ||||||||||||||||||| ||||    
T  147460 tcaaattagcaaaatggcatgggaatggacaaaaatgccct 147500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 148142 - 148002
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| | |||||| |||| |||||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||| || |||||||    
T  148142 aaaaattggtccctttattcgttaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtccatgagcccagttaattactgtcacgtca 148043  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccct 147  Q
     |  |||||||||||| ||||  ||||||||||||| ||||    
T  148042 tcaaattagcaaaatggcatgaaaatggacaaaaatgccct 148002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 24349715 - 24349816
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||| |   |||||||||| | ||||||||||    
T  24349715 aaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtccctctccccagttaatcactgccacgtca 24349814  T
Q  108 ct 109  Q
    ||    
T  24349815 ct 24349816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 52909640 - 52909567
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  52909640 aaaaattggtctatgtattcgctaatccttgcaaactagccttgcaatcattaattatttaaaatttcgtcctt 52909567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 1179187 - 1179087
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||| ||||| |||| | ||||| | |||||| |||    
T  1179187 aaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcatcctttaaccaacttaatcactgccacatca 1179088  T
Q  108 c 108  Q
    |    
T  1179087 c 1179087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 10781871 - 10781800
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcc 79  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||    
T  10781871 aaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 10781800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 13058369 - 13058268
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||  ||| | ||||| | ||||||||||    
T  13058369 aaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtca 13058270  T
Q  108 ct 109  Q
    ||    
T  13058269 ct 13058268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 37248592 - 37248491
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||| |||||||| |||||||||||| ||||||||||||||| |||| |||||||||||||  ||| | ||||| ||||||||||||    
T  37248592 aaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcattaatcattttaaatttcgtcctttgaccaatttaatcattgccacgtca 37248493  T
Q  108 ct 109  Q
    ||    
T  37248492 ct 37248491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 51692906 - 51692833
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  51692906 aaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctt 51692833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 55867501 - 55867362
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||||||||||| ||| |||| |||||||||||  |||||| |  ||||| |||||||||||||||| |   |||||||||| | ||||||||||    
T  55867501 aaaaattggtccatgtaatcgttaatccttgcaaactacccttgcattgtttaatcatttaaaatttcgtccctattcccagttaatcactgccacgtca 55867402  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccc 146  Q
     |  |||||||||||||||| ||||| |||||||||||||    
T  55867401 tcaaattagcaaaatgacattggaattgacaaaaataccc 55867362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 54713683 - 54713769
Alignment:
Q  21 tgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||  |||| |||||| ||||||| ||||    
T  54713683 tgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccctgttaatcattgccatgtca 54713769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 7452190 - 7452089
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||  ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||  ||| | ||||| | ||||||||||    
T  7452190 aaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtca 7452091  T
Q  108 ct 109  Q
    ||    
T  7452090 ct 7452089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 10780754 - 10780827
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||||||||||||| |||||||||||| |||||    
T  10780754 aaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcatcctt 10780827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 10974363 - 10974436
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||||||||||||| |||||||||||| |||||    
T  10974363 aaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcatcctt 10974436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 14802122 - 14802049
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| |||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||||||    
T  14802122 aaaaattggtccttgtattcgctaattctagcaaactattcttgcaatcattaatcatttaaaatttcgtcctt 14802049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 34765421 - 34765494
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||| ||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  34765421 aaaaatcggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctt 34765494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 37976194 - 37976295
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||| |||| | |||||||||||||  ||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| ||||||||||||    
T  37976194 aaaaactggttcctgtattcgctaatctttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcattgccacgtca 37976293  T
Q  108 ct 109  Q
    ||    
T  37976294 ct 37976295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 50418709 - 50418810
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||| ||| |||| |||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  50418709 aaaaattggtccctgtaatcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaatttaatcactgccacgtca 50418808  T
Q  108 ct 109  Q
    ||    
T  50418809 ct 50418810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 32063673 - 32063571
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattct 156  Q
    ||||| |||||||||| ||||| || || || |||||||||||||||||| |  |||||||||||| |||| ||||||||||||||||||||||||| ||    
T  32063673 ttaatcatttaaaattccgtccctgcacgcacttaattattgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaataccctcatcatcct 32063574  T
Q  157 tct 159  Q
    |||    
T  32063573 tct 32063571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 35028039 - 35028109
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtc 78  Q
    |||||||||| | ||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||    
T  35028039 aaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtc 35028109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 24350819 - 24350746
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| || |||||||||| ||||||||||||  |||||||||||||| ||||||||||||||||||    
T  24350819 aaaaattggtccctgcattcgctaatccttgcaaactagctttgcaatcattaatcatttaaaatttcgtcctt 24350746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 24711467 - 24711366
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||||||||||  ||| |||| |||||||||||| ||||||||||||||| ||||||||||||||| ||  ||| | ||||| | ||||||||||    
T  24711467 aaaaattggtccatgtcatcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcatttgaccaatttaatcactgccacgtca 24711368  T
Q  108 ct 109  Q
    ||    
T  24711367 ct 24711366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 36008885 - 36008958
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| |||||||||||||  ||||||||||| ||||||||||||||| ||||||||||| ||||||    
T  36008885 aaaaattggtccctgtattcgctaatcattgcaaactagccttgcaatcattaatcatttaaaatttagtcctt 36008958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 43155570 - 43155671
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||| ||||| ||||||||||| ||| ||  ||| | ||||| | ||||||||||    
T  43155570 aaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcgttaatcatttaaaatttagtcatttgaccaacttaatcactgccacgtca 43155669  T
Q  108 ct 109  Q
    ||    
T  43155670 ct 43155671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 44967110 - 44967211
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||  ||||||||||||| ||| |||||||| ||||||||||||||| ||||||||||| ||||||  ||| | ||||| | ||||||||||    
T  44967110 aaaaattggtctctgtattcgctaatccttacaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtca 44967209  T
Q  108 ct 109  Q
    ||    
T  44967210 ct 44967211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 46661301 - 46661200
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||  ||||| || ||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  46661301 aaaaattggtccctgtatttactaatcctcgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 46661202  T
Q  108 ct 109  Q
    ||    
T  46661201 ct 46661200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 49879248 - 49879321
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| |||| | |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  49879248 aaaaattggtccctgtaattgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctt 49879321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 39539305 - 39539210
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccac 103  Q
    ||||||||||| ||||| ||| ||||||||||||| ||| |||||| || ||||| ||||||||||||||||||  ||||||||||| | ||||||    
T  39539305 aaaaattggtcaatgtaatcgttaattcttgcaaattagccttgcattctttaatcatttaaaatttcgtcctttgacccagttaatgactgccac 39539210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 11108227 - 11108161
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaattt 74  Q
    |||||||| ||| ||||||||||||| |||||||||||| ||||||||||||||| |||||||||||    
T  11108227 aaaaattgatccttgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaattt 11108161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 27068951 - 27069097
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| |||| |||| |||||||| || ||||  ||  |||||| |  ||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  27068951 aaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 27069050  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
     |  |||||||||||| ||||||||||||||||||||||||| ||||    
T  27069051 tcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcat 27069097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 5369254 - 5369181
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| || ||||| |||| |||||||||||| ||||||||||||||| ||||||||||| ||||||    
T  5369254 aaaaattggtccctgcattcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctt 5369181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 15507714 - 15507815
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| | ||||||||||| |||||||||||| | ||||||||||| | |||| |||||||||||||  ||| | ||||| |||| |||||||    
T  15507714 aaaaattggtccctatattcgctaatccttgcaaactagtcgtgcaatcattattcatttcaaatttcgtcctttgaccaacttaatcattgtcacgtca 15507813  T
Q  108 ct 109  Q
    ||    
T  15507814 ct 15507815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 18831704 - 18831637
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttc 75  Q
    |||||||||||| |||||||||||||  ||||||||||  ||||||||||||||| ||||||||||||    
T  18831704 aaaaattggtccctgtattcgctaatcattgcaaactaaccttgcaatcattaatcatttaaaatttc 18831637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 27891625 - 27891771
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| |||| |||| ||||||||| | ||||  ||  |||||| |  ||||| ||||||||||||||||||  ||| | ||||| | || |||||||    
T  27891625 aaaaattagtccctgtaatcgctaattttggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgtcacgtca 27891724  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
     |  ||||||||||||||||||||||||||||||||| |||| ||||    
T  27891725 tcaaattagcaaaatgacatgggaatggacaaaaatatcctcgtcat 27891771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 40316946 - 40316904
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40316946 attagcaaaatgacatgggaatggacaaaaataccctcatcat 40316904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 40327020 - 40326978
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40327020 attagcaaaatgacatgggaatggacaaaaataccctcatcat 40326978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 53129547 - 53129616
Alignment:
Q  7 aaaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgt 77  Q
    |||||||||||| ||||||| |||||| ||| |||||||| ||||||||||||||| ||||||||||||||    
T  53129547 aaaaaattggtc-atgtatttgctaatccttacaaactagtcttgcaatcattaatcatttaaaatttcgt 53129616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 17355966 - 17356067
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||||   |||||||||||||  ||||||||||| |||||| |||||||| ||||||||||||||| ||  ||| | ||||| | ||||||||||    
T  17355966 aaaaattggttgctgtattcgctaatctttgcaaactagtcttgcattcattaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtca 17356065  T
Q  108 ct 109  Q
    ||    
T  17356066 ct 17356067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 52573319 - 52573415
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||||||  ||| | ||||| | |||||||||| |  |||||||||||| |||| |||||||||||||||||||| ||||    
T  52573319 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaataccctcgtcat 52573415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 54858651 - 54858747
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||||||  ||| | ||||| | |||||||||| |  |||||||||||| ||||||||  ||||||||||||||||||||    
T  54858651 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaacagacaaaaataccctcatcat 54858747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 160
Target Start/End: Original strand, 30641609 - 30641711
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattct 156  Q
    ||||| |||||||||||||||| |  ||| | ||||||| || ||||||| |  |||||||||||| ||||||||||||||||| |||||||||||| ||    
T  30641609 ttaatcatttaaaatttcgtccctacacc-acttaattactgtcacgtcatcaaattagcaaaatgtcatgggaatggacaaaattaccctcatcatcct 30641707  T
Q  157 tctt 160  Q
    ||||    
T  30641708 tctt 30641711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 50503916 - 50504007
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    ||||| |||||||||| |||||||  ||| | ||||| | |||||||||| |  |||||||||||| |||||||||||||||||||||||||    
T  50503916 ttaatcatttaaaattccgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 50504007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 10408274 - 10408128
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| |||| |||| |||||||| || ||||  ||  |||||| |  ||||| ||||||||||||||||||  ||| | ||||| | |||||| |||    
T  10408274 aaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacatca 10408175  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
     |  ||||||||||||| ||| |||||||||||||||||||| ||||    
T  10408174 tcaaattagcaaaatgatatgagaatggacaaaaataccctcgtcat 10408128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 22718220 - 22718178
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  22718220 attagcaaaatgacatgggaatggacaaaaataccctcgtcat 22718178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 23613665 - 23613599
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaattt 74  Q
    |||||||| ||| ||||||||||||| |||||||| ||| |||||||||| |||| |||||||||||    
T  23613665 aaaaattgatccctgtattcgctaatccttgcaaattagtcttgcaatcactaatcatttaaaattt 23613599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 50504106 - 50504064
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  50504106 attagcaaaatgacatgggaatggacaaaaataccctcgtcat 50504064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 54086736 - 54086837
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||  ||||||||||||| |||  || |||| |||| |||||||||| ||||||||||| ||||||  ||| | ||||| | ||||||||||    
T  54086736 aaaaattggtctctgtattcgctaatccttcaaagctagtcttgtaatcattaatcatttaaaattttgtcctttgaccaacttaatcactgccacgtca 54086835  T
Q  108 ct 109  Q
    ||    
T  54086836 ct 54086837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 54434270 - 54434331
Alignment:
Q  48 cttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtcact 109  Q
    ||||||||||||||| |||||||||| ||||||| | |||||||||| | ||||||||||||    
T  54434270 cttgcaatcattaatcatttaaaattacgtccttcatcccagttaatcactgccacgtcact 54434331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 56016034 - 56015929
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||||| || ||||||||| | ||||| |   | ||||| | ||||| |||||||||||||||||| | | |||||||| | ||||||||||    
T  56016034 aaaaattggtccatataatcgctaattatggcaaattgtccctgcaaacgttaatcatttaaaatttcgtccttcatcacagttaatcactgccacgtca 56015935  T
Q  108 ctgatt 113  Q
    ||||||    
T  56015934 ctgatt 56015929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 51859498 - 51859594
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||||||  ||| | ||||| | |||||| ||| |  |||||||||||| |||| |||||||||||||||||||| ||||    
T  51859498 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacatcatcaaattagcaaaatggcatgagaatggacaaaaataccctcgtcat 51859594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 146
Target Start/End: Complemental strand, 23455644 - 23455609
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccc 146  Q
    ||||||||||||||||||||||||||||||||||||    
T  23455644 attagcaaaatgacatgggaatggacaaaaataccc 23455609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 24411735 - 24411680
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaatt 63  Q
    |||||||| ||| ||||||||||||| |||||||||||  ||||||||||||||||    
T  24411735 aaaaattgatccctgtattcgctaatccttgcaaactaaccttgcaatcattaatt 24411680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 39538135 - 39538262
Alignment:
Q  22 gtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaa 120  Q
    ||||||||||||||||| ||| ||| |||||| || ||||| |||||||||||||||| | || | | |||||   || ||||||| |  ||||||||||    
T  39538135 gtattcgctaattcttgaaaattagtcttgcattctttaatcatttaaaatttcgtcccttaatctaattaatcgctgtcacgtcatcaaattagcaaaa 39538234  T
Q  121 tgacatgggaatggacaaaaataccctc 148  Q
    |||||||  | || ||||||||||||||    
T  39538235 tgacatgtaattgaacaaaaataccctc 39538262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 153
Target Start/End: Original strand, 22986996 - 22987038
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    |||||||||||||||||||||| ||||||||||||||| ||||    
T  22986996 attagcaaaatgacatgggaatagacaaaaataccctcgtcat 22987038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 149
Target Start/End: Original strand, 23455099 - 23455137
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctca 149  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  23455099 attagcaaaatggcatgggaatggacaaaaataccctca 23455137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 157
Target Start/End: Complemental strand, 54858945 - 54858795
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| ||||||||| ||| |||| || ||||  ||  |||||| |  ||||| ||||||||||||||||||  ||| | ||||| | | ||| ||||    
T  54858945 aaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactaccaagtca 54858846  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattctt 157  Q
     |  |||||||||||| |||| |||||||||||||||||||| || |||||    
T  54858845 tcaaattagcaaaatggcatgtgaatggacaaaaataccctcgtctttctt 54858795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 27069191 - 27069154
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    |||||||||||| |||||||||||||||||||||||||    
T  27069191 attagcaaaatggcatgggaatggacaaaaataccctc 27069154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 39666921 - 39666958
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    |||||||||||| |||||||||||||||||||||||||    
T  39666921 attagcaaaatggcatgggaatggacaaaaataccctc 39666958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 10408034 - 10408074
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatc 151  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  10408034 attagcaaaatggcatggaaatggacaaaaataccctcatc 10408074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 39701000 - 39701096
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    |||||||||||||||||| |||||  ||| | ||||| | |  ||||||| |  |||||||||||| |||||||||||||||||| |||||| ||||    
T  39701000 ttaattatttaaaatttcatcctttgaccaacttaatcactctcacgtcatcaaattagcaaaatggcatgggaatggacaaaaacaccctcgtcat 39701096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 40388443 - 40388392
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtcact 109  Q
    ||||| |||||||||||||||| ||| | |||||||| ||||||||||||||    
T  40388443 ttaatcatttaaaatttcgtccctgatcacagttaatcattgccacgtcact 40388392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 11524230 - 11524188
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    |||||||||||| |||||||||||||||||||| |||| ||||    
T  11524230 attagcaaaatggcatgggaatggacaaaaatatcctcgtcat 11524188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 39667161 - 39667023
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||| ||| |||| || | ||| ||  |||||| |  ||||| ||||||||||||||| ||  ||| | ||||| |  |||||||||    
T  39667161 aaaaattggtccctgtaatcgttaatcctggtaaattacccttgcattgtttaatcatttaaaatttcgtcttttgaccaacttaatcaccgccacgtca 39667062  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaatacc 145  Q
     |  |||||||||||| |||| |||||||||||||||||    
T  39667061 tcaaattagcaaaatggcatgagaatggacaaaaatacc 39667023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 45463354 - 45463312
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    |||||||||||| |||||||||||||||||| |||||| ||||    
T  45463354 attagcaaaatggcatgggaatggacaaaaacaccctcgtcat 45463312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 55866201 - 55866255
Alignment:
Q  59 taattatttaaaatttcgtccttgaacccagttaattattgccacgtcactgatt 113  Q
    |||| |||||||| || |||| |||||||||||||| | ||||||||||||||||    
T  55866201 taatcatttaaaaattggtccctgaacccagttaataactgccacgtcactgatt 55866255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 11524094 - 11524131
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  11524094 attagcaaaatggcatgggaatagacaaaaataccctc 11524131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 45463218 - 45463255
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    |||||||||||  |||||||||||||||||||||||||    
T  45463218 attagcaaaatagcatgggaatggacaaaaataccctc 45463255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 53702159 - 53702098
Alignment:
Q  48 cttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtcact 109  Q
    ||||||||||||||| ||||||||||||||| ||  ||| | ||||| | ||||||||||||    
T  53702159 cttgcaatcattaatcatttaaaatttcgtcatttgaccaacttaatcaatgccacgtcact 53702098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 4e-40; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 8 - 163
Target Start/End: Original strand, 6588724 - 6588880
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||||||||||||||||| |||||||||||| |||||| || ||||| ||||||||||||||||||  |||||||| || | ||||| ||||    
T  6588724 aaaaattggtccatgtattcgctaatccttgcaaactagccttgcattctttaatcatttaaaatttcgtcctttgacccagttgatcactgccaggtca 6588823  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattcttcttctt 163  Q
     |  |||||||||||| |||||||||||||||||||||||||| ||| |||||||||    
T  6588824 tcaaattagcaaaatggcatgggaatggacaaaaataccctcaccatccttcttctt 6588880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 25230143 - 25230311
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| |||||||| | |||| |||||||||||||||| ||| |||||||||||| |||||| |||    
T  25230143 aaaaattggtccctgtattcgctaatccttgcaaactagccttgcaattactaatcatttaaaatttcgtccctgagcccagttaattactgccacatca 25230242  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctc---atcattcttcttcttcctatgaac 172  Q
     | |||| |||||||| |||| ||||||||||||||||||||   ||| |||||||||||||| |||||    
T  25230243 tcagattggcaaaatggcatgcgaatggacaaaaataccctcactatccttcttcttcttcctttgaac 25230311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 591 - 718
Target Start/End: Complemental strand, 23485628 - 23485502
Alignment:
Q  591 atgaaaccctaaaagcaaaagaagaaga----caacactaataacaaagaaatggaatgattaatcgaaacggtaacggcggtgttacgaaaagtaacac 686  Q
    ||||||||||||||||||||||||||||    |||||||| |||||| |||||| |||||||    ||||| ||||||||||||||||||||||||||||    
T  23485628 atgaaaccctaaaagcaaaagaagaagaacaacaacactactaacaa-gaaatgaaatgatt----gaaacagtaacggcggtgttacgaaaagtaacac 23485534  T
Q  687 aggtgggaaacaagattcacacctcctaaccc 718  Q
    ||||||||||||||||||||||||||||||||    
T  23485533 aggtgggaaacaagattcacacctcctaaccc 23485502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 21370589 - 21370481
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||| |||||||||||| |||| ||||||||||||  |||||||||||||| |||||||||||||||| ||| |||| ||||||| | ||||||||    
T  21370589 aaaaattgatccatgtattcgttaatccttgcaaactagcattgcaatcattaataatttaaaatttcgtccctgagcccaattaattactaccacgtca 21370490  T
Q  108 ctgattagc 116  Q
    |||||||||    
T  21370489 ctgattagc 21370481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 44044155 - 44044263
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||| ||||| |||| ||||||  |||| |||||||||| |||||||||||||||| ||| |||| ||||||| ||||||||||    
T  44044155 aaaaattggtccctgtattcactaatccttgaaaactaaccttgtaatcattaatcatttaaaatttcgtccctgagcccaattaattactgccacgtca 44044254  T
Q  108 ctgattagc 116  Q
    |||||||||    
T  44044255 ctgattagc 44044263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 44045389 - 44045290
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||| |||| | | |||||||||| | ||||||||||    
T  44045389 aaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaattttgtccctcatcccagttaatcactgccacgtca 44045290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 11163095 - 11163196
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||  ||| | ||||| | ||||||||||    
T  11163095 aaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtca 11163194  T
Q  108 ct 109  Q
    ||    
T  11163195 ct 11163196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 13692607 - 13692534
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  13692607 aaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctt 13692534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 36480105 - 36480004
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| | ||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  36480105 aaaaattggtccctatattcgctaatccttgcaaactagccttgcaatcattaataatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 36480006  T
Q  108 ct 109  Q
    ||    
T  36480005 ct 36480004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 37895388 - 37895489
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| |||||||||||| |||||  ||| | ||||| | ||||||||||    
T  37895388 aaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcatcctttgaccaacttaatcactgccacgtca 37895487  T
Q  108 ct 109  Q
    ||    
T  37895488 ct 37895489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 39498666 - 39498565
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||  |||||  ||| | ||||| | ||||||||||    
T  39498666 aaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttaatcctttgaccaacttaatcactgccacgtca 39498567  T
Q  108 ct 109  Q
    ||    
T  39498566 ct 39498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 44713836 - 44713909
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  44713836 aaaaattggtcaatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctt 44713909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 6658234 - 6658133
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| ||| ||||||||||| ||||||||||| ||||||  ||| | ||||| | ||||||||||    
T  6658234 aaaaattggtccctgtattcgctaatccttgcaaactagccttacaatcattaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtca 6658135  T
Q  108 ct 109  Q
    ||    
T  6658134 ct 6658133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 16099411 - 16099310
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||| ||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||  ||| | ||||| | ||||||||||    
T  16099411 aaaaattggtccctgtattcactaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtca 16099312  T
Q  108 ct 109  Q
    ||    
T  16099311 ct 16099310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 34448182 - 34448081
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| | |||||| |||| |||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  34448182 aaaaattggtccctatattcgttaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 34448083  T
Q  108 ct 109  Q
    ||    
T  34448082 ct 34448081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 15848475 - 15848374
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||||  |||||||||||||| ||||| |||||  ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  15848475 aaaaattggtttatgtattcgctaatccttgcgaactaaccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 15848376  T
Q  108 ct 109  Q
    ||    
T  15848375 ct 15848374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 36382514 - 36382441
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| ||||||||||||| | |||||||||| ||||||||| ||||| ||||||||||||||||||    
T  36382514 aaaaattggtccctgtattcgctaatccatgcaaactagtcttgcaatcgttaatcatttaaaatttcgtcctt 36382441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 36755475 - 36755402
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| | || |||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  36755475 aaaaattggtccctataatcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctt 36755402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 39423902 - 39423801
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||| ||| | ||||||||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||  ||| | ||||| | ||||||||||    
T  39423902 aaaaattgatccctatattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaattttgtcctttgaccaacttaatcactgccacgtca 39423803  T
Q  108 ct 109  Q
    ||    
T  39423802 ct 39423801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 57 - 162
Target Start/End: Complemental strand, 25624443 - 25624337
Alignment:
Q  57 attaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattc 155  Q
    |||||| |||||||||||||||| |  |||| |||||| | |||||| ||| |  |||| ||||||| |||||||||||||||||||||||||||||| |    
T  25624443 attaatcatttaaaatttcgtccctctacccggttaatcactgccacatcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 25624344  T
Q  156 ttcttct 162  Q
    |||||||    
T  25624343 ttcttct 25624337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 9076454 - 9076353
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||   ||||||| |||| |||||||||||| ||||||||||||||| ||||||||||||||| || |||| | ||||| | |||||| |||    
T  9076454 aaaaattggtctccgtattcgttaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcatttaaccaacttaatcactgccacatca 9076355  T
Q  108 ct 109  Q
    ||    
T  9076354 ct 9076353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 163
Target Start/End: Complemental strand, 202743 - 202587
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| ||||||||| ||| |||| || ||||| ||| ||||||    ||||| |||||||||||||||| |  ||||| ||||||| | |||||| |    
T  202743 aaaaattcgtccatgtaatcgttaatcctggcaaattagccttgcagagtttaatcatttaaaatttcgtccctacacccacttaattactcccacgtta 202644  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattcttcttctt 163  Q
     |  |||||||||||| |||| |||| |||||||||||| ||||||| |||||||||    
T  202643 tcaaattagcaaaatggcatgagaatagacaaaaataccttcatcatccttcttctt 202587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 3556396 - 3556288
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||  |||| ||| |||| |||||||||||| |||||| || ||||| |||||||||||| ||||| ||| ||| |||| | ||||||||||    
T  3556396 aaaaattggtctctgtaatcgttaatccttgcaaactagccttgcattctttaatcatttaaaatttcctcctttaactcagctaatcaatgccacgtca 3556297  T
Q  108 ctgattagc 116  Q
     ||||||||    
T  3556296 ttgattagc 3556288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 25231235 - 25231136
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||||||||||||||||| || ||||| ||  ||||||| | ||||| |||||||||||||||| |   |||||||||| | ||||||||||    
T  25231235 aaaaattggtccatgtattcgctaatcctagcaaattacccttgcaaactttaatcatttaaaatttcgtcccttgtcccagttaatgactgccacgtca 25231136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 151
Target Start/End: Original strand, 25623378 - 25623473
Alignment:
Q  57 attaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatc 151  Q
    |||||| |||||||||||||||| |  |||| |||||| | |||||||||| |  |||| ||||||| ||||||||||||||||||||||||||||    
T  25623378 attaatcatttaaaatttcgtccctctacccggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatc 25623473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 8710853 - 8710707
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| ||||||||| |||||||| ||  |||  ||  |||||| |  ||||| ||||||||||||||||||  ||| | || || | ||||||||||    
T  8710853 aaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaactttatcactgccacgtca 8710754  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
     |  |||||||||||| ||||||||||||||||||||||||| ||||    
T  8710753 tcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcat 8710707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 45556434 - 45556368
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaattt 74  Q
    |||||||||||  |||||||||||||  ||||||||||| ||||||||||||||| |||||||||||    
T  45556434 aaaaattggtcgctgtattcgctaatctttgcaaactagccttgcaatcattaatcatttaaaattt 45556368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 10713110 - 10713009
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||||   ||||||||||||| |||||||| ||| ||||||||| ||||| ||||||||| ||||||||  ||| | ||||| | ||||||||||    
T  10713110 aaaaattggtttctgtattcgctaatccttgcaaattagccttgcaatcgttaatcatttaaaatgtcgtcctttgaccaacttaatcactgccacgtca 10713011  T
Q  108 ct 109  Q
    ||    
T  10713010 ct 10713009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 15604674 - 15604578
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||||||  ||| | ||||| | |||| ||||| |  |||||||||||| ||||||||||||||||||||||||| ||||    
T  15604674 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccccgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcat 15604578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 3555291 - 3555377
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaat 94  Q
    |||||||||||  |||||||| || | ||| |||| ||| |||||| || ||||| |||||||||||||||||| ||||||||||||    
T  3555291 aaaaattggtctctgtattcgttattccttacaaattagccttgcattctttaatcatttaaaatttcgtcctttaacccagttaat 3555377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 39936633 - 39936495
Alignment:
Q  9 aaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca- 107  Q
    ||||||||||| |||| ||| |||| || ||||| ||  |||||||   ||||| ||||||||||||||||||  ||| | ||||| | ||||||||||     
T  39936633 aaaattggtccttgtaatcgttaatcctggcaaattacccttgcaaagtttaatcatttaaaatttcgtcctttgaccaatttaatcaatgccacgtcat 39936534  T
Q  108 ctgattagcaaaatgacatgggaatggacaaaaataccc 146  Q
    |  |||||||||||| ||||| || ||||||||||||||    
T  39936533 caaattagcaaaatggcatggaaaaggacaaaaataccc 39936495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 2318897 - 2318836
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaa 69  Q
    |||||||||| ||||||||||||| |  ||||||||||| ||||||||||||||| ||||||    
T  2318897 aaaaattggttcatgtattcgctattcgttgcaaactagtcttgcaatcattaatcatttaa 2318836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 8710613 - 8710653
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatc 151  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  8710613 attagcaaaatggcatgggaatggacaaaaataccctcatc 8710653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 15604484 - 15604524
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatc 151  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  15604484 attagcaaaatggcatgggaatggacaaaaataccctcatc 15604524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 41587325 - 41587421
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| |||||||||||| ||||| |||| | ||||| | || ||||||| |  |||||||||||  |||||||||||||||||||||| |||||||    
T  41587325 ttaatcatttaaaatttcatcctttaaccaacttaatcactgtcacgtcatcaaattagcaaaattgcatgggaatggacaaaaataccgtcatcat 41587421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 153
Target Start/End: Original strand, 11830509 - 11830551
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    |||||||||||| ||||||||||||||||||||||||| ||||    
T  11830509 attagcaaaatggcatgggaatggacaaaaataccctcgtcat 11830551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 30729662 - 30729748
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaat 94  Q
    |||||||||||| | ||||||||||| |||||||| |   |||||| || |||||  |||||||||||||||||  |||||||||||    
T  30729662 aaaaattggtccctatattcgctaatccttgcaaattgcccttgcattctttaatcgtttaaaatttcgtcctttgacccagttaat 30729748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 2318199 - 2318300
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||||| ||||| ||||||||||| ||||  ||  |||||| |  ||||| |||||||||||||||| |   |||| ||||||| ||||||||||    
T  2318199 aaaaattggtctatgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaattaatgccacgtca 2318298  T
Q  108 ct 109  Q
    ||    
T  2318299 ct 2318300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 148
Target Start/End: Complemental strand, 41588443 - 41588302
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| |||| |||| ||||||||||| ||||  || |||| || |  ||||| |||||||||||| |||||  ||| | ||||| | ||||| ||||    
T  41588443 aaaaattagtccctgtaatcgctaattctggcaatttacacttacattgtttaatcatttaaaatttcatcctttgaccaacttaatcactgccaagtca 41588344  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
     |  |||||||||||| ||||| ||| |||||||||||||||    
T  41588343 tcaaattagcaaaatggcatggaaattgacaaaaataccctc 41588302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 8342278 - 8342369
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    ||||| ||||||||||||||||||  ||| | ||||| | | ||| |||| |  |||||||||||| ||||||||| |||||||||||||||    
T  8342278 ttaatcatttaaaatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagcaaaatggcatgggaattgacaaaaataccctc 8342369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 11349542 - 11349484
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtcactgattagc 116  Q
    ||||| |||||||||||||||| | |||||||||||| | |||||||||  ||||||||    
T  11349542 ttaatcatttaaaatttcgtccctcaacccagttaatcagtgccacgtctttgattagc 11349484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 29957939 - 29957997
Alignment:
Q  89 gttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccc 146  Q
    |||||| |||||||||||| |  |||||||||||| ||||||||| |||||||||||||    
T  29957939 gttaatcattgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 29957997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 9e-38; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 20385609 - 20385717
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||| ||||||||||    
T  20385609 aaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtccctgagcccagttaattactgccacgtca 20385708  T
Q  108 ctgattagc 116  Q
    |||||||||    
T  20385709 ctgattagc 20385717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 30712103 - 30711996
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||||| |||||| |||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||| |||||| |||    
T  30712103 aaaaattggtcc-tgtatttgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtccctgaacccagttaattactgccacatca 30712005  T
Q  108 ctgattagc 116  Q
    |||||||||    
T  30712004 ctgattagc 30711996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 30719880 - 30719773
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||||| |||||| |||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||| |||||| |||    
T  30719880 aaaaattggtcc-tgtatttgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtccctgaacccagttaattactgccacatca 30719782  T
Q  108 ctgattagc 116  Q
    |||||||||    
T  30719781 ctgattagc 30719773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 30710897 - 30711003
Alignment:
Q  9 aaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtcac 108  Q
    ||||||||| |||||||||||||||| ||||||||||  ||||||||||||||| |||||||||||||||| ||| |||||||||||| || ||||||||    
T  30710897 aaaattggttcatgtattcgctaatttttgcaaactaaccttgcaatcattaatcatttaaaatttcgtccctgagcccagttaattactgtcacgtcac 30710996  T
Q  109 tgattag 115  Q
    |||||||    
T  30710997 tgattag 30711003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 34177357 - 34177215
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||| ||||||| |||||| || ||||| |||||||||||||||| |  ||||| ||||| | |||||| |||    
T  34177357 aaaaattggtccttgtattcgctaatccttgtaaactagccttgcattctttaatcatttaaaatttcgtcccttgacccacttaatgactgccacatca 34177258  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctca 149  Q
     |  |||||||||||| ||||||||||||||||||||||||||    
T  34177257 tcaaattagcaaaatggcatgggaatggacaaaaataccctca 34177215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 20386817 - 20386709
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| || ||||| |||||| |||||||||||||||| ||| ||||||||| || |||||| |||    
T  20386817 aaaaattggtccctgtattcgctaatccttgcaaactagcctcgcaattattaatcatttaaaatttcgtccctgagcccagttaactactgccacatca 20386718  T
Q  108 ctgattagc 116  Q
    |||||||||    
T  20386717 ctgattagc 20386709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 13186446 - 13186345
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||| ||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||| ||  ||| ||||||| | ||||||||||    
T  13186446 aaaaattggttcatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcatttgaccaagttaatcactgccacgtca 13186347  T
Q  108 ct 109  Q
    ||    
T  13186346 ct 13186345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 1425094 - 1425195
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||| ||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||  ||| | ||||| ||||||||||||    
T  1425094 aaaaattggtccctgtattcactaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcattgccacgtca 1425193  T
Q  108 ct 109  Q
    ||    
T  1425194 ct 1425195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 8316694 - 8316767
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||||||||||||||||| |||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  8316694 aaaaattggtccatgtattcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctt 8316767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 22915430 - 22915531
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||||||||||||| ||||| ||||||||| ||  ||| | ||||| ||||||||||||    
T  22915430 aaaaattggtccatgtaatcgctaatccttgcaaactagccttgcaatcattaatcatttacaatttcgtcttttgaccaatttaatcattgccacgtca 22915529  T
Q  108 ct 109  Q
    ||    
T  22915530 ct 22915531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 36928863 - 36928762
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||||| ||||||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  36928863 aaaaattggtctatgtatttgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 36928764  T
Q  108 ct 109  Q
    ||    
T  36928763 ct 36928762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 38862950 - 38862877
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||  ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  38862950 aaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctt 38862877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 36186142 - 36186212
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtc 78  Q
    |||| ||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  36186142 aaaatttggtccctgtattcgctaatccttgcaaactagtattgcaatcattaattatttaaaatttcgtc 36186212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 12198991 - 12199064
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| | || |||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  12198991 aaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctt 12199064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 12443419 - 12443492
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| | || |||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  12443419 aaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctt 12443492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 23698350 - 23698423
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||| |||| |||| ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||    
T  23698350 aaaaattagtccctgtaatcgctaattcttgcaaactagccttgcaatcattaatcagttaaaatttcgtcctt 23698423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 35756969 - 35756896
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||  |||||||| |||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  35756969 aaaaattggtctctgtattcgttaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctt 35756896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 38956059 - 38955986
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||| ||||||||||| ||||||    
T  38956059 aaaaattggtccctgtattcgctaatccttgtaaactagccttgcaatcattaatcatttaaaatttagtcctt 38955986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 39072028 - 39071956
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| |||||||| |||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  39072028 aaaaattggtccctgtattcg-taatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctt 39071956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 4994698 - 4994768
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtc 78  Q
    |||||||| ||  ||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||    
T  4994698 aaaaattgatctctgtattcgctaatccttggaaactagccttgcaatcattaattatttaaaatttcgtc 4994768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 23 - 160
Target Start/End: Original strand, 7294157 - 7294295
Alignment:
Q  23 tattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaat 121  Q
    ||||||||||| |||| ||||||| |||||| || ||||| |||||||||||| |||||  ||||||||||| | || ||  ||| |  |||||||||||    
T  7294157 tattcgctaatccttgtaaactagccttgcattctttaatcatttaaaatttcatcctttgacccagttaatcactgtcagatcatcaaattagcaaaat 7294256  T
Q  122 gacatgggaatggacaaaaataccctcatcattcttctt 160  Q
    | |||  ||||||||||||||| ||||||||| ||||||    
T  7294257 ggcataagaatggacaaaaataacctcatcatccttctt 7294295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 12272959 - 12273032
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||  |||| |||||||| |||||||||||| |||||||| |||||| ||||||||||||||||||    
T  12272959 aaaaattggtctctgtaatcgctaatccttgcaaactagccttgcaattattaatcatttaaaatttcgtcctt 12273032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 23663586 - 23663687
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||||||| |||| |||| ||||||  |||| |||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  23663586 aaaaattggtccctgtattcgttaatccttggaaactaaccttgaaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 23663685  T
Q  108 ct 109  Q
    ||    
T  23663686 ct 23663687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 35634434 - 35634341
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcat 150  Q
    ||||| |||||||||||||||||| |||| | ||||| | || ||||||| |  |||||||||||| |||||||||||||||||||||||||||    
T  35634434 ttaatcatttaaaatttcgtcctttaaccaacttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcat 35634341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 40318005 - 40318106
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| |||  ||||||||||||| |||||||||||| ||||||||||||||| |||||||||| |||| ||  ||| | ||||| | ||||||||||    
T  40318005 aaaaatttgtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaattgcgtcatttgaccaacttaatcactgccacgtca 40318104  T
Q  108 ct 109  Q
    ||    
T  40318105 ct 40318106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 163
Target Start/End: Complemental strand, 2535937 - 2535781
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||| ||| |||| || ||||| ||  ||| |||   ||||| |||||||||||||||| |  ||||| ||||| | |||||| |||    
T  2535937 aaaaattggtccctgtaatcgttaatcctggcaaattacccttacaaagtttaatcatttaaaatttcgtcccttgacccacttaatgactgccacatca 2535838  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattcttcttctt 163  Q
     |  ||||| |||||| ||||||||||||||||||||| |||||||| |||||||||    
T  2535837 tcaaattagtaaaatggcatgggaatggacaaaaatacactcatcatccttcttctt 2535781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 15230266 - 15230170
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||||||  ||| | ||||| | |||||||||| |  |||||||||||| ||||||||||||||||||||||||| ||||    
T  15230266 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcat 15230170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 146
Target Start/End: Original strand, 34176497 - 34176621
Alignment:
Q  23 tattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaat 121  Q
    |||||| |||| |||||||||||| |||||| || ||||| |||||||||||| |||||  ||||||||||| | || || |||| |  |||||||||||    
T  34176497 tattcgttaatccttgcaaactagtcttgcattctttaatcatttaaaatttcatcctttgacccagttaatcactgtcaggtcatcaaattagcaaaat 34176596  T
Q  122 gacatgggaatggacaaaaataccc 146  Q
    | | |||||| ||||||||||||||    
T  34176597 ggcttgggaaaggacaaaaataccc 34176621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 2534736 - 2534875
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||| |||||| |||||||| |||||||||||  |||||| |  ||||| |||||||||||||||| |   |||||||||| | |||||| |||    
T  2534736 aaaaattggtacatgtaatcgctaatccttgcaaactactcttgcattgtttaatcatttaaaatttcgtccctattcccagttaatcactgccacatca 2534835  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccc 146  Q
     |  ||||||||||||  |||| ||| |||||||||||||    
T  2534836 tcaaattagcaaaatggtatggaaattgacaaaaataccc 2534875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 7295314 - 7295215
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||| ||||| ||||||||||||| |||||||||||| |||||| || |||||  ||||||||||| |||||  ||||||| ||| | ||||||||||    
T  7295314 aaaaatcggtccctgtattcgctaatccttgcaaactagtcttgcattctttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtca 7295215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 25124948 - 25124802
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| |||  |||| ||||||||||| ||||  ||  |||||| |  ||||| |||||||||||| |||||  | | | ||||| | ||||||||||    
T  25124948 aaaaattagtctctgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcatcctttgaacaacttaatcactgccacgtca 25124849  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
     |  |||||||||||||||||||||||||||||||||||||| ||||    
T  25124848 tcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcat 25124802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 34685644 - 34685575
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtc 78  Q
    |||||||||||  ||||||||||||| |||||||||||| ||| ||||||||||| |||||||||||||||    
T  34685644 aaaaattggtct-tgtattcgctaatccttgcaaactagccttacaatcattaatcatttaaaatttcgtc 34685575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 34061715 - 34061616
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||| ||||||||||||||||| |||||||| |   |||||| || ||||| ||||||||||||||||||  ||| ||||||| | ||||| ||||    
T  34061715 aaaaattgatccatgtattcgctaatccttgcaaattgcccttgcattctttaatcatttaaaatttcgtcctttgaccaagttaatcactgccatgtca 34061616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 148
Target Start/End: Complemental strand, 10445720 - 10445579
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| |||| |||| |||||||| || ||||  ||  |||||| |  ||||| ||||||||||||||| ||  ||| | ||||| | ||||||||||    
T  10445720 aaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcttttgaccaacttaatcactgccacgtca 10445621  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
     |  |||||||||||| ||||| |||||||||||||||||||    
T  10445620 tcaaattagcaaaatggcatggaaatggacaaaaataccctc 10445579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 15230076 - 15230116
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatc 151  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  15230076 attagcaaaatggcatgggaatggacaaaaataccctcatc 15230116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 37542560 - 37542464
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtcactga-ttagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||||||  ||| | ||||| | | | |||||| ||| |||||||||||||||  |||||||||||||||||||| ||||    
T  37542560 ttaatcatttaaaatttcgtcctttgaccaacttaatcactccaacgtcattgaattagcaaaatgacattagaatggacaaaaataccctcgtcat 37542464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 42945205 - 42945296
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    ||||| ||||||||||||||||||  ||| | ||||| | ||||| |||| |  ||||| |||||| |||||||||||||||||||||||||    
T  42945205 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccaagtcatcaaattagtaaaatggcatgggaatggacaaaaataccctc 42945296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 58 - 148
Target Start/End: Complemental strand, 44664843 - 44664752
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    ||||| ||||||||||||||  ||  ||| | ||||| ||||||| |||| | ||||||||||||| |||||||||||||||||||| ||||    
T  44664843 ttaatcatttaaaatttcgttatttgaccaacttaatcattgccaagtcatcagattagcaaaatggcatgggaatggacaaaaatatcctc 44664752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 21432974 - 21432932
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||||||||||||||||||||||| |||||||||||| ||||    
T  21432974 attagcaaaatgacatgggaatggataaaaataccctcgtcat 21432932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 33357539 - 33357593
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaat 62  Q
    |||||||| ||||||||||||||||| ||||||||| || ||| |||||||||||    
T  33357539 aaaaattgatccatgtattcgctaatccttgcaaaccagtcttacaatcattaat 33357593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 27500233 - 27500270
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  27500233 attagcaaaatgacatgagaatggacaaaaataccctc 27500270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 31608900 - 31608799
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||||||||||||||||| |||||||  ||  |||||| |   |||| |||||||||||||||| |   |||| ||||| | ||||||||||    
T  31608900 aaaaattggtccatgtattcgctaatccttgcaatttacccttgcattgtctaatcatttaaaatttcgtccctctccccacttaatcactgccacgtca 31608801  T
Q  108 ct 109  Q
    ||    
T  31608800 ct 31608799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 39474637 - 39474733
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcatt 154  Q
    ||||| ||||||||||||||| |||| || | ||||| | |||||| ||| |  |||||||||||| ||||| ||||||||||||||||||| |||||    
T  39474637 ttaatcatttaaaatttcgtctttga-ccaacttaatcactgccacatcatcaaattagcaaaatggcatggaaatggacaaaaataccctcgtcatt 39474733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 6471781 - 6471877
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||| ||  | | | ||||| | |||||||||| |  ||||||||||||||||||||||||| ||||||| |||| ||||    
T  6471781 ttaatcatttaaaatttcgtctttttatcaacttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggataaaaatatcctcgtcat 6471877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 41353908 - 41353820
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaatacc 145  Q
    ||||| ||||||||||||||||||  ||| | ||||| |  | ||||||| |  ||||||||||||||||| |||||||||||||||||    
T  41353908 ttaatcatttaaaatttcgtcctttgaccaacttaatcaccgtcacgtcatcaaattagcaaaatgacatgagaatggacaaaaatacc 41353820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 42945449 - 42945353
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||| ||  ||| | ||||| | ||||| |||| |  ||||| |||||| ||||||||||||||||||||||||| ||||    
T  42945449 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgccaagtcatcaaattagtaaaatggcatgggaatggacaaaaataccctcgtcat 42945353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 44664599 - 44664695
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||| ||  ||| | ||||| | |||||||||| |  |||||||||||| || ||||||||||||||||| |||| ||||    
T  44664599 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcacgggaatggacaaaaatatcctcgtcat 44664695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 4406047 - 4405976
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcc 79  Q
    ||||||||||||||||||| | |||| |||||||  ||  ||||||||  ||||| ||||||||||||||||    
T  4406047 aaaaattggtccatgtatttgttaatccttgcaatttacccttgcaatgtttaatcatttaaaatttcgtcc 4405976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 7306440 - 7306525
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaa 93  Q
    |||||||||||| || | || ||||||||||||||| |  | |||||| |||||| | |||||| || ||||||| ||||||||||    
T  7306440 aaaaattggtccttgcaatcactaattcttgcaaacaaaccctgcaattattaatcacttaaaaattggtccttgtacccagttaa 7306525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 11675050 - 11674949
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| |||| |||| | |||||| || ||||  ||| ||||||||  ||||| ||||||||||| ||||||| ||| | ||||| | ||||||||||    
T  11675050 aaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttggtccttggaccaacttaatcactgccacgtca 11674951  T
Q  108 ct 109  Q
    ||    
T  11674950 ct 11674949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 146
Target Start/End: Original strand, 11761931 - 11762020
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccc 146  Q
    ||||| |||||||||||||| | | | | | |||||| | |||||||||| |  |||||||||||  |||||||||||||||||||||||    
T  11761931 ttaatcatttaaaatttcgtacctcatcactgttaatcactgccacgtcatcaaattagcaaaatagcatgggaatggacaaaaataccc 11762020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 9e-38; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 46899102 - 46899242
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||| ||| |||||||||||| |||||| |||    
T  46899102 aaaaattggtccatgtattcgctaattcttgcaaactagctttgcaatcattaatcatttaaaatttcgtccctgagcccagttaattactgccacatca 46899201  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccct 147  Q
     |  || | ||||||| ||||||||||||||||||| ||||    
T  46899202 tcaaataaacaaaatggcatgggaatggacaaaaatgccct 46899242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 46899987 - 46899847
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||| || |||||||    
T  46899987 aaaaattggtcaatgtattcgctaattcttgcaaactagccttgcaatcattaatcatttaaaatttcgtccctgagcccagttaattactgtcacgtca 46899888  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccct 147  Q
     |  ||||| |||||| |||||||||| |||||||| ||||    
T  46899887 tcaaattagtaaaatggcatgggaatgaacaaaaatgccct 46899847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 5735098 - 5734952
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||| ||||||||||||||| |||||||||||| ||| ||||||||||| |||||||||||||||| ||| |||||||||||| || |||||||    
T  5735098 aaaaattggttcatgtattcgctaatccttgcaaactagccttacaatcattaatcatttaaaatttcgtccctgagcccagttaattactgtcacgtca 5734999  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
     |  |||| ||||||| |||| |||| ||||||||| ||||||||||    
T  5734998 tcaaattaacaaaatggcatgagaatagacaaaaatgccctcatcat 5734952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 47999164 - 47999264
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||  ||| | ||||||||||||||||||    
T  47999164 aaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaacttaattattgccacgtca 47999263  T
Q  108 c 108  Q
    |    
T  47999264 c 47999264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 6367949 - 6367848
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  6367949 aaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 6367850  T
Q  108 ct 109  Q
    ||    
T  6367849 ct 6367848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 183262 - 183363
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||  ||| | ||||| | ||||||||||    
T  183262 aaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtca 183361  T
Q  108 ct 109  Q
    ||    
T  183362 ct 183363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 1103848 - 1103775
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  1103848 aaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctt 1103775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 26024779 - 26024678
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||| |||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  26024779 aaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgaccaatttaatcactgccacgtca 26024680  T
Q  108 ct 109  Q
    ||    
T  26024679 ct 26024678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 48779506 - 48779405
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| ||||||||||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  48779506 aaaaattagtccatgtatttgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 48779407  T
Q  108 ct 109  Q
    ||    
T  48779406 ct 48779405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 49723113 - 49723012
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||||||||||||||||| |||||||||||| ||| ||||||||||| |||||||||||| |||||  ||| | ||||| | ||||||||||    
T  49723113 aaaaattggtccatgtattcgctaatccttgcaaactagcctttcaatcattaatcatttaaaatttcatcctttgaccaacttaatcactgccacgtca 49723014  T
Q  108 ct 109  Q
    ||    
T  49723013 ct 49723012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 42248859 - 42248757
Alignment:
Q  7 aaaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtc 106  Q
    ||||||||||||  |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| | ||  ||| | ||||| |||| ||||||    
T  42248859 aaaaaattggtctctgtattcgctaattcttgcaaactagtcttgcaattattaattatttaaaatttcgacatttgaccaacttaatcattgtcacgtc 42248760  T
Q  107 act 109  Q
    |||    
T  42248759 act 42248757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 1841845 - 1841745
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||| ||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  1841845 aaaaattgttccctgtattcgctaatccttgcaaactag-cttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 1841747  T
Q  108 ct 109  Q
    ||    
T  1841746 ct 1841745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 4960896 - 4960823
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||||||||  |||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  4960896 aaaaattggtccccgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctt 4960823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 13914109 - 13914182
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||| |||||||||||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  13914109 aaaaattagtccatgtattcgctaatccttgcaaattagtcttgcaatcattaatcatttaaaatttcgtcctt 13914182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 30711714 - 30711613
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||  ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||| ||  ||| | ||||| | ||||||||||    
T  30711714 aaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtca 30711615  T
Q  108 ct 109  Q
    ||    
T  30711614 ct 30711613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 160
Target Start/End: Original strand, 32132345 - 32132498
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| ||||||||| ||| |||| |||||||| ||  ||| |||   ||||| | |||||||||||||| |  ||||| ||||||| ||||||||||    
T  32132345 aaaaattcgtccatgtaatcgttaatccttgcaaattactcttacaaagtttaatcaattaaaatttcgtccctacacccacttaattactgccacgtca 32132444  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattcttctt 160  Q
     |  |||||||||||| |||||||||||||||||||| ||||||||| ||||||    
T  32132445 tcaaattagcaaaatgtcatgggaatggacaaaaataacctcatcatccttctt 32132498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 32917647 - 32917546
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||  |||||||| |||| |||||||||||| ||||||||||||||| |||||||||||| |||||  ||| | ||||| ||||||||||||    
T  32917647 aaaaattggtctctgtattcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttcatcctttgaccaacttaatcattgccacgtca 32917548  T
Q  108 ct 109  Q
    ||    
T  32917547 ct 32917546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 36694323 - 36694396
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| ||||    
T  36694323 aaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgccctt 36694396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 36710424 - 36710497
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| ||||    
T  36710424 aaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgccctt 36710497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 40210411 - 40210484
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||| ||||||  ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  40210411 aaaatttggtctttgtattcgctaatccttgcaaactagacttgcaatcattaatcatttaaaatttcgtcctt 40210484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 5734051 - 5734192
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||||| ||||| |||||||| |||||||| ||| |||||| |  ||||| ||||||||||| |||| || ||||  ||||||| || |||||||    
T  5734051 aaaaattggtc-atgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaattttgtccctgcacccgtttaattactgtcacgtca 5734149  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctca 149  Q
     |  |||| ||||||| ||||||||||||||||||||||||||    
T  5734150 tcaaattaacaaaatggcatgggaatggacaaaaataccctca 5734192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 17661893 - 17661965
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| ||||||||||||| ||||||||||||  |||||||||||||| ||||||||||||||||||    
T  17661893 aaaaattggtcc-tgtattcgctaatccttgcaaactagcattgcaatcattaatcatttaaaatttcgtcctt 17661965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 37578233 - 37578302
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgt 77  Q
    |||||||||||| ||||||||||||| |||||||||||| ||| ||||||||||| ||||||||||||||    
T  37578233 aaaaattggtccctgtattcgctaatccttgcaaactagccttccaatcattaatcatttaaaatttcgt 37578302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 7371381 - 7371472
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    ||||||||||||||||||||||||  ||| | ||||| | |||||||||| |  |||||||||||| |||||||||||||||||||||||||    
T  7371381 ttaattatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 7371472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 7821340 - 7821268
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||||||| |||||||||||||| |||||||||||| | ||||||||||||| ||||| ||||||||||||    
T  7821340 aaaaattggtc-atgtattcgctaatccttgcaaactagccgtgcaatcattaatcatttataatttcgtcctt 7821268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 24009616 - 24009689
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| ||||||| ||||| ||||| |||||| ||||||||||||||| |||||||||||| |||||    
T  24009616 aaaaattggtccttgtattcactaatccttgccaactagccttgcaatcattaatcatttaaaatttcatcctt 24009689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 43759209 - 43759136
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||| ||||| ||||||||||||| |||||||||||| ||||||||| | ||| ||||||||||||||||||    
T  43759209 aaaaatcggtccctgtattcgctaatccttgcaaactagccttgcaatcttcaatcatttaaaatttcgtcctt 43759136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 35040999 - 35040835
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| ||||||||| |||||||| ||  |||  ||  |||||| |  ||||| ||||||||||||||||||  ||| | ||||| | | ||| ||||    
T  35040999 aaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactaccaagtca 35040900  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattcttcttcttcctatgaa 171  Q
     |  |||||||||||| ||||||||||||||||||||||||| || |||||||| ||||| ||||    
T  35040899 tcaaattagcaaaatggcatgggaatggacaaaaataccctcgtctttcttctttttcctttgaa 35040835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 41099120 - 41099050
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtc 78  Q
    |||||||||||  ||||||||||||| |||||||||||  ||| ||||||||||| |||||||||||||||    
T  41099120 aaaaattggtctctgtattcgctaatccttgcaaactaaccttacaatcattaatcatttaaaatttcgtc 41099050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 8898608 - 8898704
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||||||  ||| | ||||| | || ||||||| |  |||||||||||| ||||||||||||||||||||||||| ||||    
T  8898608 ttaatcatttaaaatttcgtcctttgaccaatttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcat 8898704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 19017683 - 19017739
Alignment:
Q  21 tgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgt 77  Q
    ||||||||||||| ||| |||||||| ||||||||||||||| ||||||||||||||    
T  19017683 tgtattcgctaatccttacaaactagtcttgcaatcattaatcatttaaaatttcgt 19017739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 34849052 - 34849164
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||| ||  |||||||   ||||| |||||||||||||||| |   |||  ||||| | ||||||||||    
T  34849052 aaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatttaaaatttcgtccctctcccctcttaatcactgccacgtca 34849151  T
Q  108 ctgattagcaaaa 120  Q
    | |||||||||||    
T  34849152 ccgattagcaaaa 34849164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 34850452 - 34850344
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||| ||  |||||||   ||||| |||||||||||| ||| |   |||| ||||| | ||||||||||    
T  34850452 aaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatttaaaatttcatccctctccccacttaatcactgccacgtca 34850353  T
Q  108 ctgattagc 116  Q
    |||||||||    
T  34850352 ctgattagc 34850344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 35038546 - 35038642
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||||||  ||| | | ||| | |||||||||| |  |||||||||||| |||||||||||||||||||| |||||||||    
T  35038546 ttaatcatttaaaatttcgtcctttgaccaactcaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaatatcctcatcat 35038642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 40714535 - 40714631
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||| ||  ||| | ||||| | |||||||||| |  |||||||||||| ||||||||||||||||||||||||| ||||    
T  40714535 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcat 40714631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 42533092 - 42533160
Alignment:
Q  48 cttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtcactgattagc 116  Q
    ||||||||||| ||| ||||||||||| |||  ||| |||||||||||| |||||||||||||||||||    
T  42533092 cttgcaatcatcaatcatttaaaattttgtctctgagcccagttaattactgccacgtcactgattagc 42533160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 48691189 - 48691293
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||  |||||||| ||||||||||||||||  |||||||||||| || ||||||||||| |||  |   |||| ||||| | ||||||||||    
T  48691189 aaaaattggtcgctgtattcgttaattcttgcaaactaaccttgcaatcattgatcatttaaaattttgtcactctccccacttaatcactgccacgtca 48691288  T
Q  108 ctgat 112  Q
    |||||    
T  48691289 ctgat 48691293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 17691260 - 17691398
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||| |||||||| |||||||| ||| |||||| |  ||||| |||||||||||||||| | |||| ||||||  | | |||| |||    
T  17691260 aaaaattggtccctgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaatttcgtccctcaaccaagttaaccacttccacatca 17691359  T
Q  108 ctgattagcaaaatgacatgggaatggacaaaaataccc 146  Q
     |||||| ||||||   ||  ||| ||||||||||||||    
T  17691360 gtgattaacaaaatatgatttgaaaggacaaaaataccc 17691398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 23209417 - 23209503
Alignment:
Q  23 tattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtcact 109  Q
    |||||| |||| |||||||||||| ||||||||||||||| ||||||||||| || |||  ||| | ||||| | ||||||||||||    
T  23209417 tattcgttaatccttgcaaactagccttgcaatcattaatcatttaaaattttgttctttgaccaacttaatcactgccacgtcact 23209503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 49955388 - 49955534
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| |||| |||| |||||||| || ||||  ||  |||||| |  ||||| ||||||||||| ||||||  ||| | ||||| | |||||| |||    
T  49955388 aaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaattttgtcctttgaccaacttaatcactgccacatca 49955487  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
     |  |||||||||||| ||||||||||||||||||||||||| ||||    
T  49955488 tcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcat 49955534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 19322933 - 19323002
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgt 77  Q
    ||||||| || ||||||||||||||| |||||||||||   |||||||||||||| |||||||| |||||    
T  19322933 aaaaattcgttcatgtattcgctaatccttgcaaactaactttgcaatcattaatcatttaaaagttcgt 19323002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 19323279 - 19323210
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgt 77  Q
    ||||||| || ||||||||||||||| |||||||||||   |||||||||||||| |||||||| |||||    
T  19323279 aaaaattcgttcatgtattcgctaatccttgcaaactaactttgcaatcattaatcatttaaaagttcgt 19323210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 35473672 - 35473745
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| |||| |||||||| || ||||||||| |||| |||||||||  ||||||||||| ||||||    
T  35473672 aaaaattggtccctgtaatcgctaatcctggcaaactagccttgtaatcattaaacatttaaaattttgtcctt 35473745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 28324895 - 28324991
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||| ||  ||| | ||||| | |||||||||| |  |||||||||||| ||||| ||||||||||||||||||| ||||    
T  28324895 ttaatcatttaaaatttcgtcttttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatggaaatggacaaaaataccctcgtcat 28324991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 31058392 - 31058296
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||  ||  ||| | ||||| | |||||||||| |  |||||||||||| ||||||||||||||||||||||||| ||||    
T  31058392 ttaatcatttaaaatttcgtattttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcat 31058296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 57 - 151
Target Start/End: Original strand, 13295225 - 13295320
Alignment:
Q  57 attaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatc 151  Q
    |||||| ||||||||| |||||| |   ||| |||||| | |||||||||| |  |||||||||||||||||| ||| ||||||||||||||||||    
T  13295225 attaatcatttaaaatgtcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaatgacatggaaatagacaaaaataccctcatc 13295320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 58 - 148
Target Start/End: Complemental strand, 49955682 - 49955591
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    ||||| ||||||||||||||||||  ||| | ||||| |  |||| |||| |  |||||||||||| |||||||||||||||||||||||||    
T  49955682 ttaatcatttaaaatttcgtcctttgaccaacttaatcaccgccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 49955591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 145
Target Start/End: Complemental strand, 20760786 - 20760752
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaatacc 145  Q
    |||||||||||||||||||||||||||||||||||    
T  20760786 attagcaaaatgacatgggaatggacaaaaatacc 20760752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 8898798 - 8898761
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  8898798 attagcaaaatgacacgggaatggacaaaaataccctc 8898761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 17189099 - 17189136
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    |||||||||||| |||||||||||||||||||||||||    
T  17189099 attagcaaaatggcatgggaatggacaaaaataccctc 17189136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 24905208 - 24905309
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| |||| |||| | |||||| |||||||  ||| ||||||||  ||||| ||||||||||| ||||||| ||| | ||||| | ||||||||||    
T  24905208 aaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcatttaaaatttggtccttggaccaacttaatcactgccacgtca 24905307  T
Q  108 ct 109  Q
    ||    
T  24905308 ct 24905309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 13300291 - 13300183
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||  ||||||| ||||| |||||||| ||  ||| || || ||||| | |||||| ||  ||||| |||||| ||||| | ||||||||||    
T  13300291 aaaaattggtctctgtattcactaatccttgcaaattactcttacattctttaataacttaaaaattgatccttcaacccacttaatcagtgccacgtca 13300192  T
Q  108 ctgattagc 116  Q
    |||||||||    
T  13300191 ctgattagc 13300183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 30326641 - 30326673
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaata 143  Q
    |||||||||||||||||||||||||||||||||    
T  30326641 attagcaaaatgacatgggaatggacaaaaata 30326673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 146
Target Start/End: Original strand, 50062348 - 50062383
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccc 146  Q
    |||||||||||||||||||||| |||||||||||||    
T  50062348 attagcaaaatgacatgggaattgacaaaaataccc 50062383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 143
Target Start/End: Complemental strand, 45750177 - 45750091
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaata 143  Q
    ||||| |||||||||||| || ||  ||| | ||||| | |||||||||| |  |||||||||||| ||||||||||||||||||||    
T  45750177 ttaatcatttaaaatttcatcatttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaata 45750091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 48692401 - 48692335
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaattt 74  Q
    |||||||| ||  |||||||| ||||||||||||| ||| ||| ||| ||||||| |||||||||||    
T  48692401 aaaaattgatcattgtattcgttaattcttgcaaattagccttacaaacattaatcatttaaaattt 48692335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 14879318 - 14879257
Alignment:
Q  48 cttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtcact 109  Q
    ||||||| ||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||||    
T  14879318 cttgcaaccattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcact 14879257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 28325085 - 28325048
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  28325085 attagcaaaatgacataggaatggacaaaaatatcctc 28325048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 34464490 - 34464591
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||||||||||| ||||||||  | ||||  ||  ||||||||  ||||| ||||||||||||||| ||  ||| | ||||| | ||||||||||    
T  34464490 aaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtca 34464589  T
Q  108 ct 109  Q
    ||    
T  34464590 ct 34464591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 35152690 - 35152657
Alignment:
Q  48 cttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||||||||||| ||||||||||||||||||    
T  35152690 cttgcaatcattaatcatttaaaatttcgtcctt 35152657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 40772819 - 40772786
Alignment:
Q  48 cttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||||||||||| |||||||||||||    
T  40772819 cttgcaatcattaattatttcaaatttcgtcctt 40772786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 45749987 - 45750024
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  45749987 attagcaaaatggcatgagaatggacaaaaataccctc 45750024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 2e-35; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 681115 - 681007
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||  ||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||| ||||||||||    
T  681115 aaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtccatgagcccagttaattactgccacgtca 681016  T
Q  108 ctgattagc 116  Q
    |||||||||    
T  681015 ctgattagc 681007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 13379869 - 13379729
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||| || || ||||    
T  13379869 aaaaattggtccctgtattcgctaattcttgcaaactagccttgcaatcattaatcatttaaaatttcgtccctgagcccagttaattactgtcatgtca 13379770  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccct 147  Q
     |  ||||||||||||   ||||||||||||||||| ||||    
T  13379769 tcaaattagcaaaatggtttgggaatggacaaaaatgccct 13379729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 20652034 - 20651899
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||| ||| ||||||| ||||| ||||||||| || ||||||||| ||||| |||||||||||||||| |||||||||||||||| ||||||||||    
T  20652034 aaaaattgatccctgtattcactaatccttgcaaaccagccttgcaatcgttaatcatttaaaatttcgtccctgaacccagttaattactgccacgtca 20651935  T
Q  108 ct-gattagcaaaatgacatgggaatggacaaaaat 142  Q
     |  ||||||||||||||||||||||||| ||||||    
T  20651934 ttaaattagcaaaatgacatgggaatggataaaaat 20651899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 679907 - 680015
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||  ||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||| |||||| |||    
T  679907 aaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtccatgagcccagttaattactgccacatca 680006  T
Q  108 ctgattagc 116  Q
    |||||||||    
T  680007 ctgattagc 680015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 20651051 - 20651191
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||| | ||||||||||||| ||||||||| || ||||||||||||||| |||||||||||||||| |||  ||||||||| | ||||||||||    
T  20651051 aaaaattggttcctgtattcgctaatccttgcaaaccagccttgcaatcattaatcatttaaaatttcgtccatgagtccagttaataactgccacgtca 20651150  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccct 147  Q
     |  |||||||||||| ||||||||||||||||||| ||||    
T  20651151 tcaaattagcaaaatggcatgggaatggacaaaaatgccct 20651191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 11434843 - 11434944
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||||||||| ||||||||||||||||||  ||||||||||| | ||||||||||    
T  11434843 aaaaattggtccatgtattcgctaatcgttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacccagttaatcactgccacgtca 11434942  T
Q  108 ct 109  Q
    ||    
T  11434943 ct 11434944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 21627754 - 21627855
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  21627754 aaaaattgatccatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 21627853  T
Q  108 ct 109  Q
    ||    
T  21627854 ct 21627855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 30337805 - 30337704
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||| |||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  30337805 aaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaatttaatcactgccacgtca 30337706  T
Q  108 ct 109  Q
    ||    
T  30337705 ct 30337704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 30726146 - 30726045
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  30726146 aaaaattggtccctgtattcgctaatccttgcaaactagccttgaaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 30726047  T
Q  108 ct 109  Q
    ||    
T  30726046 ct 30726045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 30804248 - 30804147
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||| ||| ||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  30804248 aaaaattgatccctgtattcgctaattcttgcaaactagcgttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 30804149  T
Q  108 ct 109  Q
    ||    
T  30804148 ct 30804147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 33517921 - 33517820
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  33517921 aaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 33517822  T
Q  108 ct 109  Q
    ||    
T  33517821 ct 33517820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 12081023 - 12080950
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||| |||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  12081023 aaaaatttgtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctt 12080950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 8090314 - 8090206
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||| ||||| |||||||| ||  |||||||   ||||| ||||||||||| |||| ||| ||||||||||||||||||||||     
T  8090314 aaaaattggtccttgtattcactaatccttgcaaattacccttgcaaagtttaatcatttaaaatttggtccctgagcccagttaattattgccacgtcg 8090215  T
Q  108 ctgattagc 116  Q
    |||||||||    
T  8090214 ctgattagc 8090206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 3059643 - 3059576
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttc 75  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||    
T  3059643 aaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 3059576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 11393191 - 11393121
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtc 78  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||    
T  11393191 aaaaattggtccccgtattcgctaatccttgcaaactagacttgcaatcattaatcatttcaaatttcgtc 11393121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 164
Target Start/End: Original strand, 8089484 - 8089641
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| | || ||| |||| |||||||| ||  |||||| |  ||||| |||||||||||||||| | |||||| ||||| |  | |||||||    
T  8089484 aaaaattggtccctataatcgttaatccttgcaaattacccttgcattgtttaatcatttaaaatttcgtcccttaacccacttaatgaccgacacgtca 8089583  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattcttcttcttc 164  Q
     |  |||| ||||||| |||||||||||||||||||||||||||| |||||| |||||    
T  8089584 tcaaattaacaaaatggcatgggaatggacaaaaataccctcatccttcttcatcttc 8089641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 17734237 - 17734338
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||| | |||| | |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  17734237 aaaaattggttcttgtaattgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaatttaatcactgccacgtca 17734336  T
Q  108 ct 109  Q
    ||    
T  17734337 ct 17734338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 33647338 - 33647265
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| ||||||||||||| |||||||||||  ||||||||||||||| ||||||||||| ||||||    
T  33647338 aaaaattggtccctgtattcgctaatccttgcaaactaaccttgcaatcattaatcatttaaaatttagtcctt 33647265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 31407213 - 31407117
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||||||  ||| | ||||| | || ||||||| |  |||||||||||||||||||||||||||||||||||||| ||||    
T  31407213 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcat 31407117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 15116619 - 15116513
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||||||  ||| |||||||| |||||||||||| |||||||   ||||| |||||||| || |||| | ||||||||||||   ||||||||||    
T  15116619 aaaaattggtcctcgtaatcgctaatccttgcaaactagccttgcaaagtttaatcatttaaaaattggtccctcaacccagttaatcgatgccacgtca 15116520  T
Q  108 ctgatta 114  Q
    |||||||    
T  15116519 ctgatta 15116513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 22503159 - 22503013
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| |||| |||| |||||||| || ||||  ||  |||||| |  ||||| ||||||| ||||||| ||  ||| | ||||| | ||||||||||    
T  22503159 aaaaattagtccttgtaatcgctaatcctggcaatttatccttgcattgtttaatcatttaaattttcgtcatttgaccaacttaatcactgccacgtca 22503060  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
     |  |||||||||||||||||||||||||||||||||||||| ||||    
T  22503059 tcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcat 22503013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 26463220 - 26463326
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||||||| |||| || ||||| ||  |||||||   ||||| |||||||||||||||| | | |||||||||| | ||||||||||    
T  26463220 aaaaattggtccctgtattcgttaatcctggcaaattacccttgcaaagtttaatcatttaaaatttcgtccctcatcccagttaatcactgccacgtca 26463319  T
Q  108 ctgatta 114  Q
    |||||||    
T  26463320 ctgatta 26463326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 12407549 - 12407657
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||  ||||||||||||| |||| ||| ||  || ||||   ||||| ||||||||||| |||| |||||| ||||||||| ||||||||||    
T  12407549 aaaaattggtctctgtattcgctaatccttgtaaattactctagcaaagtttaatcatttaaaatttggtccctgaacctagttaattactgccacgtca 12407648  T
Q  108 ctgattagc 116  Q
    || ||||||    
T  12407649 ctaattagc 12407657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 15913883 - 15913787
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||||||  ||| | ||||| | || ||||||| |  |||||||||||| ||||||||||||||||||||||||| ||||    
T  15913883 ttaataatttaaaatttcgtcctttgaccaacttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcat 15913787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 28498412 - 28498304
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||| |||||||| || ||||||||  ||  |||   ||||| ||||||||||| |||| ||| |||||||||| | ||||||||||    
T  28498412 aaaaattggtccttgtaatcgctaatcctggcaaactaccctcccaaagtttaatcatttaaaatttggtccctgagcccagttaatcactgccacgtca 28498313  T
Q  108 ctgattagc 116  Q
    |||||||||    
T  28498312 ctgattagc 28498304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 7160895 - 7160991
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||||||  ||| | ||||| | | |||||||| |  |||||||||||  ||||||||||||||||||||||||| ||||    
T  7160895 ttaatcatttaaaatttcgtcctttgaccaacttaatcactaccacgtcatcaaattagcaaaatagcatgggaatggacaaaaataccctcgtcat 7160991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 7905578 - 7905482
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| |||| |||||||||| ||  ||| | ||||| | |||||||||| |  |||||||||||| ||||||||||||||||||||||||| ||||    
T  7905578 ttaatcatttcaaatttcgtcatttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcat 7905482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 12408558 - 12408450
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||| ||||||| ||||||||||||| |||||||| ||  |||||||   ||||| |||||||||||  ||| ||| ||||||||||||  | ||| |||    
T  12408558 aaaagttggtccttgtattcgctaatccttgcaaattatccttgcaaagtttaatcatttaaaatttgatccctgagcccagttaattaccgtcacatca 12408459  T
Q  108 ctgattagc 116  Q
    |||||||||    
T  12408458 ctgattagc 12408450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 21836122 - 21836217
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||||||  ||  | ||||| | |||||||||| |  |||||||||||| ||||||||||||||||||||||||| ||||    
T  21836122 ttaatcatttaaaatttcgtcctttgaca-acttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcat 21836217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 153
Target Start/End: Original strand, 12065365 - 12065407
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    |||||||||||| ||||||||||||||||||||||||| ||||    
T  12065365 attagcaaaatggcatgggaatggacaaaaataccctcgtcat 12065407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 29810773 - 29810715
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtcactgattagc 116  Q
    ||||| ||||||||||| |||| ||| |||||||||| | |||||||||||||||||||    
T  29810773 ttaatcatttaaaatttggtccctgagcccagttaatcactgccacgtcactgattagc 29810715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 15115380 - 15115479
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| | || ||| |||| |||||||| ||| |||||||   ||||| ||||||||||| ||||||  ||||| ||||||| | ||||||||    
T  15115380 aaaaattggtccctataatcgttaatccttgcaaattagccttgcaaagtttaatcatttaaaatttagtccttacacccacttaattactaccacgtca 15115479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 148
Target Start/End: Complemental strand, 21836365 - 21836274
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    ||||| ||||||||||||||||||  ||| | ||||| | ||||| |||| |  |||| ||||||| |||||||||||||||||||| ||||    
T  21836365 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccaagtcatcaaattaacaaaatggcatgggaatggacaaaaatatcctc 21836274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 22502865 - 22502956
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    ||||| ||||||||||||||||||  ||| | ||||| | ||||| |||| |  ||||||||||||  ||| ||||||||||||||||||||    
T  22502865 ttaatcatttaaaatttcgtcctttgaccaacttaataactgccaagtcatcaaattagcaaaatggtatgagaatggacaaaaataccctc 22502956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 11436043 - 11436009
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaa 42  Q
    |||||||||| ||||||||||||||||||||||||    
T  11436043 aaaaattggttcatgtattcgctaattcttgcaaa 11436009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 7905388 - 7905425
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    |||||||||||| || ||||||||||||||||||||||    
T  7905388 attagcaaaatggcacgggaatggacaaaaataccctc 7905425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 31407023 - 31407060
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  31407023 attagcaaaatggcatggaaatggacaaaaataccctc 31407060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 8 - 163
Target Start/End: Complemental strand, 11741904 - 11741748
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||| ||||  |||||||||||||  ||||||||||| |||||| || ||||| ||||||||||||||||||  ||||||||||| | || || ||||    
T  11741904 aaaaatcggtctctgtattcgctaatctttgcaaactagccttgcattctttaatcatttaaaatttcgtcctttgacccagttaatcactgtcaggtca 11741805  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcattcttcttctt 163  Q
     |  |||||||||||| ||| |||||||||||||||||||||||||| |||||||||    
T  11741804 tcaaattagcaaaatggcattggaatggacaaaaataccctcatcatccttcttctt 11741748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 6301584 - 6301685
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||  ||| | ||||| | ||||||||||    
T  6301584 aaaaattggtccttgtattcgctaatccttgcaaactagtcttgcaatcattaattatttaaaatttcgtcctttgaccaatttaatcactgccacgtca 6301683  T
Q  108 ct 109  Q
    ||    
T  6301684 ct 6301685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 21265184 - 21265285
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||  ||| | ||||| | ||||||||||    
T  21265184 aaaaattggtccatgtatttgctaatccttgcaaactagccttgcaatcattaattatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 21265283  T
Q  108 ct 109  Q
    ||    
T  21265284 ct 21265285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 5994276 - 5994203
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||| ||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  5994276 aaaaattggttcatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctt 5994203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 6301930 - 6301829
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||||||| |||| |||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  6301930 aaaaattggtccttgtattcgttaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgaccaatttaatcactgccacgtca 6301831  T
Q  108 ct 109  Q
    ||    
T  6301830 ct 6301829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 11762104 - 11762003
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||  ||| | ||||| | ||||||||||    
T  11762104 aaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtca 11762005  T
Q  108 ct 109  Q
    ||    
T  11762004 ct 11762003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 14194464 - 14194537
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  14194464 aaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctt 14194537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 16156896 - 16156997
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||||| ||||||||| |||| |||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  16156896 aaaaattggtctatgtattcgttaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 16156995  T
Q  108 ct 109  Q
    ||    
T  16156996 ct 16156997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 28269463 - 28269564
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||||||  |||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  28269463 aaaaattggtcccagtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 28269562  T
Q  108 ct 109  Q
    ||    
T  28269563 ct 28269564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 38475074 - 38475175
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||||||||| ||  ||| | ||||| | ||||||||||    
T  38475074 aaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatcattaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtca 38475173  T
Q  108 ct 109  Q
    ||    
T  38475174 ct 38475175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 39453686 - 39453585
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||||||||||||  ||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  39453686 aaaaattggtccctgtattcgctaatctttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 39453587  T
Q  108 ct 109  Q
    ||    
T  39453586 ct 39453585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 21257548 - 21257408
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||| |  ||||||||||||| |||||||||||| ||||| ||||||||| |||||||| ||||||   ||||||||||||||| | |||| |||    
T  21257548 aaaaattggacactgtattcgctaatccttgcaaactagccttgcgatcattaatcatttaaaaattcgtctcggaacccagttaattactaccacatca 21257449  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccct 147  Q
     |  |||||||||||| |||| |||||||||||||| ||||    
T  21257448 tcaaattagcaaaatggcatgagaatggacaaaaatgccct 21257408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 186806 - 186705
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||||| ||||||  ||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| |||| |||||||    
T  186806 aaaaattggtccctgtatttgctaatctttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcattgtcacgtca 186707  T
Q  108 ct 109  Q
    ||    
T  186706 ct 186705  T

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Target: chr5; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 6150807 - 6150706
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| ||||||||||||| ||||  ||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  6150807 aaaaattagtccatgtattcgttaatctttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 6150708  T
Q  108 ct 109  Q
    ||    
T  6150707 ct 6150706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 11047823 - 11047723
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||||||| |||||||| ||||| |||||||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  11047823 aaaaattggtc-atgtattcactaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 11047725  T
Q  108 ct 109  Q
    ||    
T  11047724 ct 11047723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 17202786 - 17202685
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||| ||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||| ||  ||| | ||||| | ||||||||||    
T  17202786 aaaaatcggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtca 17202687  T
Q  108 ct 109  Q
    ||    
T  17202686 ct 17202685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 19892349 - 19892422
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||||||||||||||||| |||| |||||||||||| |||| |||||||||| ||||||||||||||||||    
T  19892349 aaaaattggtccatgtattcgttaatccttgcaaactagccttgtaatcattaatcatttaaaatttcgtcctt 19892422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 20814177 - 20814277
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||  ||||||||||||| ||||||||||||  |||||||||||||| |||||||||||||||||| |||| | ||||| | ||||||||||    
T  20814177 aaaaattggtct-tgtattcgctaatccttgcaaactagtattgcaatcattaatcatttaaaatttcgtcctttaaccaacttaatcactgccacgtca 20814275  T
Q  108 ct 109  Q
    ||    
T  20814276 ct 20814277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 27587502 - 27587429
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||    
T  27587502 aaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctt 27587429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 29646403 - 29646504
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||||||||||||||||| |||||||||||| ||| ||||||||||| |||||||||||  |||||  ||| | ||||| | ||||||||||    
T  29646403 aaaaattggtccatgtattcgctaatccttgcaaactagccttccaatcattaatcatttaaaattttatcctttgaccaacttaatcactgccacgtca 29646502  T
Q  108 ct 109  Q
    ||    
T  29646503 ct 29646504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 35920269 - 35920342
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  35920269 aaaaattggtcaatgtattcgctaatccttgcaaattagccttgcaatcattaatcatttaaaatttcgtcctt 35920342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 43159201 - 43159100
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||  ||||||||||||| ||| |||||||| ||||||||||||||| ||||||||||||||||||  ||| | ||||| | ||||||||||    
T  43159201 aaaaattggtcgttgtattcgctaatccttacaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 43159102  T
Q  108 ct 109  Q
    ||    
T  43159101 ct 43159100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 37991240 - 37991316
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaa 84  Q
    |||||||||||| |||||||| |||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||    
T  37991240 aaaaattggtccctgtattcgttaatccttgcaaactagccttgcaatcattaatcatttcaaatttcgtccttgaa 37991316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 35512501 - 35512431
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtc 78  Q
    |||||||||||| ||||||||| ||| |||||||||||| ||||||||||||||| |||||||||||||||    
T  35512501 aaaaattggtccctgtattcgccaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtc 35512431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 3528914 - 3529015
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||||| |||||| |||||||||||| ||||||||| ||||| ||||||||||| ||||||  ||| | ||||| | ||||||||||    
T  3528914 aaaaattggtccctgtatttgctaatccttgcaaactagccttgcaatcgttaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtca 3529013  T
Q  108 ct 109  Q
    ||    
T  3529014 ct 3529015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 5024060 - 5024161
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||| | ||||||||||||||| |||||||||||| |||||||||| |||| ||||||||||| ||||||  ||| | ||||| | ||||||||||    
T  5024060 aaaaattgatacatgtattcgctaatccttgcaaactagccttgcaatcactaatcatttaaaattttgtcctttgaccaacttaatcactgccacgtca 5024159  T
Q  108 ct 109  Q
    ||    
T  5024160 ct 5024161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 8322791 - 8322718
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    ||||||||||||  ||||||| |||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  8322791 aaaaattggtccccgtattcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctt 8322718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 13963216 - 13963147
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgt 77  Q
    ||||||||||| ||||||||| |||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  13963216 aaaaattggtctatgtattcgttaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgt 13963147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 16083330 - 16083261
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgt 77  Q
    |||||||||| ||| ||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  16083330 aaaaattggttcatatattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgt 16083261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 32242628 - 32242528
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| |||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||| ||||||  ||| | ||||| | ||||||||||    
T  32242628 aaaaattagtcc-tgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaattttgtcctttgaccaacttaatcactgccacgtca 32242530  T
Q  108 ct 109  Q
    ||    
T  32242529 ct 32242528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 11740728 - 11740827
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||| ||||| ||||||||||| |||||||||||| |||||| || ||||| ||||||||||| ||||||  ||||||||||| | || |||||||    
T  11740728 aaaaattgatccatatattcgctaatccttgcaaactagccttgcattctttaatcatttaaaattttgtcctttgacccagttaatgactgtcacgtca 11740827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 19517994 - 19517928
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaattt 74  Q
    ||||||| ||||||||||||||||||  ||||||||||| ||||||||||||||| |||||||||||    
T  19517994 aaaaattagtccatgtattcgctaatctttgcaaactagccttgcaatcattaatcatttaaaattt 19517928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 28770910 - 28771011
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||||||||| |||||||||||| ||| |||||||| || ||||||||||| ||| ||  ||| | ||||| | ||||||||||    
T  28770910 aaaaattggtccctgtattcgctaatccttgcaaactagccttacaatcattgatcatttaaaatttagtcatttgaccaacttaatcactgccacgtca 28771009  T
Q  108 ct 109  Q
    ||    
T  28771010 ct 28771011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 27937096 - 27937164
Alignment:
Q  10 aaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtc 78  Q
    |||||||||  | ||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||    
T  27937096 aaattggtctctatattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtc 27937164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 22870417 - 22870363
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcattcttcttcttcct 166  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  22870417 attagcaaaatgacatgggaatggacaaaaataccctcatca-tcttcttcgtcct 22870363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 38442454 - 38442381
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||| ||| | |||||||| |||| |||||||||||| ||||||||||||||  ||||||||||||||||||    
T  38442454 aaaaatgggttcttgtattcgttaatccttgcaaactagccttgcaatcattaaccatttaaaatttcgtcctt 38442381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 42265776 - 42265841
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatt 73  Q
    |||||||||||| ||||||||||||| |||||||||||| |||||| || ||||| ||||||||||    
T  42265776 aaaaattggtccctgtattcgctaatccttgcaaactagccttgcattctttaatgatttaaaatt 42265841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 20153253 - 20153157
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| |||||||||||| |||||  ||| | ||||| | ||| |||||| |  |||||||||||||||||||||||||||||||||||||| ||||    
T  20153253 ttaatcatttaaaatttcatcctttgaccaacttaatcactgctacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcat 20153157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 13362290 - 13362369
Alignment:
Q  30 taattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtcact 109  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||||||   ||| | ||||| | ||||||||||||    
T  13362290 taatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctctgaccaacttaatcactgccacgtcact 13362369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 10684311 - 10684255
Alignment:
Q  22 gtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtc 78  Q
    |||||| ||||| |||||||||||| ||||||||||||||| ||||||| |||||||    
T  10684311 gtattcactaatccttgcaaactagtcttgcaatcattaatcatttaaagtttcgtc 10684255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 151
Target Start/End: Original strand, 22869702 - 22869790
Alignment:
Q  64 atttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatc 151  Q
    |||||||||||||||| |   ||| |||||| | |||||||||| |  |||||||||||| |||| |||||||||||||||||||||||    
T  22869702 atttaaaatttcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaataccctcatc 22869790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 18247463 - 18247404
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattattt 67  Q
    |||| ||||||  ||||||||||||| |||||||||||| ||||||||||||||| ||||    
T  18247463 aaaatttggtctctgtattcgctaatccttgcaaactagtcttgcaatcattaatcattt 18247404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 24547258 - 24547301
Alignment:
Q  35 cttgcaaactagacttgcaatcattaattatttaaaatttcgtc 78  Q
    |||||||||||| ||||||||||||||| |||||||||||||||    
T  24547258 cttgcaaactagccttgcaatcattaatcatttaaaatttcgtc 24547301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 17544329 - 17544287
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    |||||||||||| ||||||||||||||||||||||||| ||||    
T  17544329 attagcaaaatggcatgggaatggacaaaaataccctcgtcat 17544287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 17544193 - 17544230
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    |||||||||||| |||||||||||||||||||||||||    
T  17544193 attagcaaaatggcatgggaatggacaaaaataccctc 17544230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 20153063 - 20153100
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    |||||||||||| |||||||||||||||||||||||||    
T  20153063 attagcaaaatggcatgggaatggacaaaaataccctc 20153100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 22298687 - 22298724
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    |||||||||||||||||||||| |||||||||||||||    
T  22298687 attagcaaaatgacatgggaattgacaaaaataccctc 22298724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 20840824 - 20840760
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaat 72  Q
    ||||||||||   |||| |||||||| || ||||||||| ||||||||||||||| |||||||||    
T  20840824 aaaaattggtaactgtaatcgctaatcctagcaaactagtcttgcaatcattaatcatttaaaat 20840760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 37992660 - 37992604
Alignment:
Q  23 tattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcc 79  Q
    |||| ||||||  ||||||||||| |||||||||||||||  |||||||||||||||    
T  37992660 tatttgctaatctttgcaaactagccttgcaatcattaatcgtttaaaatttcgtcc 37992604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 24547217 - 24547264
Alignment:
Q  7 aaaaaattggtccatgtattcgctaattcttgcaaactagacttgcaa 54  Q
    ||||||||||||| |||| |||||||| |||||||||||| |||||||    
T  24547217 aaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaa 24547264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 33871673 - 33871590
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaa 140  Q
    ||||| ||||||||||||||| ||  ||| | ||||| | ||| |||||| |  ||||||||||||||||||||||||||||||    
T  33871673 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgctacgtcatcaaattagcaaaatgacatgggaatggacaaaa 33871590  T

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Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 111 - 145
Target Start/End: Complemental strand, 21287938 - 21287904
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaatacc 145  Q
    |||||||||||| ||||||||||||||||||||||    
T  21287938 attagcaaaatggcatgggaatggacaaaaatacc 21287904  T

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Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 41930872 - 41930771
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| |||| |||| | |||||| |||||||  ||| ||||||||  ||||| ||||||||||| ||||||| ||| | ||||| | | ||||||||    
T  41930872 aaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcatttaaaatttggtccttggaccaacttaatcactaccacgtca 41930773  T
Q  108 ct 109  Q
    ||    
T  41930772 ct 41930771  T

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Target: scaffold0031 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 69352 - 69255
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgt 105  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||| |||| | ||||| | ||||||||    
T  69352 aaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttaaccaacttaatcactgccacgt 69255  T

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Target: scaffold0020 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 140028 - 139927
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||  ||| | ||||| | ||||||||||    
T  140028 aaaaattggtccctgtattcactaattcttgcaaactagccttgcaatcattaattatttaaaatttagtcctttgaccaacttaataactgccacgtca 139929  T
Q  108 ct 109  Q
    ||    
T  139928 ct 139927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 5003 - 5142
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||| ||| | ||||||||||| |||||||||||| |||||||| |||||| ||||||||||||||||||  ||| | |||||   ||||||||||    
T  5003 aaaaattgatccctatattcgctaatccttgcaaactagccttgcaattattaatcatttaaaatttcgtcctttgacctaattaatcgctgccacgtca 5102  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccc 146  Q
     |  |||||||||||||||||| || ||||||||||||||    
T  5103 tcaaattagcaaaatgacatggaaaaggacaaaaataccc 5142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 6365 - 6227
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| | || ||| |||| |||||||| ||  ||||||||  ||||| |||||||||||||| | | |||||| ||||| | ||||||||||    
T  6365 aaaaattggtccttataatcgataatccttgcaaattacccttgcaatgtttaatcatttaaaatttcgttccttaacccacttaatgactgccacgtca 6266  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaatacc 145  Q
     |  ||||||||| || ||| |||| |||||||||||||    
T  6265 tcaaattagcaaagtggcataggaaaggacaaaaatacc 6227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 6466 - 6393
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| ||||||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  6466 aaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcatttaaaatttcgtcctt 6393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 37605 - 37678
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtcctt 81  Q
    |||||||||||| |||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||||||    
T  37605 aaaaattggtccttgtattcgctaattctagcaaactattcttgcaatcattaatcatttaaaatttcgtcctt 37678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 14470 - 14571
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| ||| || ||||||||||| |||||||||||| ||||||||||||||| ||||||||||| ||| ||  ||| | ||||| | ||||||||||    
T  14470 aaaaattagtctatttattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaattttgtcttttgaccaacttaatcactgccacgtca 14569  T
Q  108 ct 109  Q
    ||    
T  14570 ct 14571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 11525 - 11379
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| ||||||||| ||| |||| || ||||  ||  |||||| |  ||||| ||||||||||||||| ||  ||| | ||||| | ||||||||||    
T  11525 aaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcttttgaccaacttaatcactgccacgtca 11426  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
     |  |||||||||||| ||||||||||||||||||||||||| ||||    
T  11425 tcaaattagcaaaatggcatgggaatggacaaaaataccctcgtcat 11379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 11231 - 11322
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    ||||| ||||||||||||||||||  ||| | ||||| | ||||| |||| |  |||||||||||| |||||||||||||||||||||||||    
T  11231 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 11322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 19898 - 20035
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    |||||||||||| |||  |||||||| |||||||| ||   ||||| || ||||| |||||||||||||| | | |||| | ||||| | || |||||||    
T  19898 aaaaattggtccctgtgatcgctaatccttgcaaattacctttgcattctttaatcatttaaaatttcgttcattaacctaattaatgactgtcacgtca 19997  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaatac 144  Q
     |  |||||||||||| |||||||||||||||||||||    
T  19998 tcaaattagcaaaatggcatgggaatggacaaaaatac 20035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 961 - 1105
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgtccttgaacccagttaattattgccacgtca 107  Q
    ||||||| ||||||||| ||||||||  | ||||  ||  |||||| |  ||||| ||||||||||||||||||  ||| | ||||| | || || ||||    
T  961 aaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgtcaagtca 1060  T
Q  108 -ctgattagcaaaatgacatgggaatggacaaaaataccctcatc 151  Q
     |  |||||||||||| ||||||||||||||||||||||||||||    
T  1061 tcaaattagcaaaatggcatgggaatggacaaaaataccctcatc 1105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 145
Target Start/End: Complemental strand, 12574 - 12486
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaatacc 145  Q
    ||||| |||||||||||||| |||  ||| | ||||| | |||||||||| |  |||||||||||||||||||||| ||||||||||||    
T  12574 ttaatcatttaaaatttcgttctttgacctacttaatcactgccacgtcatcaaattagcaaaatgacatgggaatagacaaaaatacc 12486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 12384 - 12421
Alignment:
Q  111 attagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  12384 attagcaaaatgacatggaaatggacaaaaatatcctc 12421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 221881 - 221976
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctcatcat 153  Q
    ||||| ||||||||||||||||||  ||  | ||||| | |||||||||| |  |||||||||||| |||||||||| |||||||||||||||||||    
T  221881 ttaatcatttaaaatttcgtcctttgaca-acttaatcactgccacgtcatcaaattagcaaaatggcatgggaatgaacaaaaataccctcatcat 221976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 58 - 148
Target Start/End: Complemental strand, 222124 - 222033
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaataccctc 148  Q
    ||||| ||||||||||||||||||  ||| | ||||| | ||||| |||| |  |||| ||||||| |||||||||||||||||||||||||    
T  222124 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccaagtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 222033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 24683 - 24625
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtcactgattagc 116  Q
    ||||| ||||||||||| |||  ||| |||||||||||| |||||||||||||||||||    
T  24683 ttaatcatttaaaattttgtctctgagcccagttaattactgccacgtcactgattagc 24625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 143
Target Start/End: Complemental strand, 12115 - 12029
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtca-ctgattagcaaaatgacatgggaatggacaaaaata 143  Q
    ||||| ||||||||||||||||||  ||| | ||||| | |||||||||| |  |||||||||||| |||| |||||||||||||||    
T  12115 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaata 12029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 2128 - 2059
Alignment:
Q  8 aaaaattggtccatgtattcgctaattcttgcaaactagacttgcaatcattaattatttaaaatttcgt 77  Q
    |||||||||||| || | | ||||||  ||||||||||  ||||||||||||||| ||||||||||||||    
T  2128 aaaaattggtccctgaaattgctaatctttgcaaactatccttgcaatcattaatcatttaaaatttcgt 2059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 239888 - 239830
Alignment:
Q  58 ttaattatttaaaatttcgtccttgaacccagttaattattgccacgtcactgattagc 116  Q
    ||||| |||||||||||||||| |  ||||| ||||||| |||||| ||||||||||||    
T  239888 ttaatcatttaaaatttcgtccctacacccacttaattactgccacatcactgattagc 239830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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