View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0151_1D_high_31 (Length: 208)
Name: NF0151_1D_high_31
Description: NF0151_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0151_1D_high_31 |
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Alignment Details
Target: chr4 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 23 - 191
Target Start/End: Complemental strand, 41209090 - 41208923
Alignment:
| Q |
23 |
gtatccacgtattcttattcttatctaatatatatatactcctataatcatacacataaaattaaacccaatattgtacttaaaaaattcactcaatann |
122 |
Q |
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| T |
41209090 |
gtatccacgtattcttattcttatctaatatatata--ctcctataatcatacacataaaattaaacccaatattgtacttaaaaaattaactcaatatt |
41208993 |
T |
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| Q |
123 |
nnnnnnnngacaagattataaactcagtattta-ttttnnnnnnnntatcctagagcatattcttctgat |
191 |
Q |
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||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |
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| T |
41208992 |
ttttttttgacaagattataaactcagtatttatttttaaaaaaaatatcctagagcatattcttctgat |
41208923 |
T |
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