View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0151_1D_low_24 (Length: 321)
Name: NF0151_1D_low_24
Description: NF0151_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0151_1D_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 22 - 288
Target Start/End: Original strand, 35373292 - 35373558
Alignment:
| Q |
22 |
ccatttatgctatttaaatttaagatgttttgaaattactactaaaagtgaatggttactttcattttatatctcaatttatcgatattacttgagcgat |
121 |
Q |
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| T |
35373292 |
ccatgtatgctatttaaatttaagatgttttgaaattactactaaaagtgaatggttactttcattttatatctcgatttatcgatattacttgatcgat |
35373391 |
T |
|
| Q |
122 |
taatttttgtcaataacttttcgacatttctatataaggcaataactagcaattttagtttgtgttcaattt---tagtctctttgaaattttatattct |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | | | || |||||||||||||||| |
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| T |
35373392 |
taatttttgtcaataacttttcgacatttctatataaggc---aactagcaattttagtttgtgttcaaaataaaaaatgtccctgaaattttatattct |
35373488 |
T |
|
| Q |
219 |
ttcatttctagtctctttgaaattttgtagtgtcaatttgttgtttgtgaattttgttgtgcacaggttc |
288 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
35373489 |
ttcatttttagtctctttgaaattttgtagtgtcaatttgttgtttgtgaattttgttgtgcacaagttc |
35373558 |
T |
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