View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0151_1D_low_27 (Length: 295)

Name: NF0151_1D_low_27
Description: NF0151_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0151_1D_low_27
NF0151_1D_low_27
[»] chr8 (52 HSPs)
chr8 (1-295)||(2518533-2518821)
chr8 (74-205)||(13171880-13172007)
chr8 (81-268)||(10824332-10824511)
chr8 (158-268)||(44373780-44373890)
chr8 (84-254)||(44681221-44681387)
chr8 (74-254)||(41971960-41972132)
chr8 (62-223)||(8879653-8879811)
chr8 (74-268)||(16917108-16917297)
chr8 (74-281)||(36143293-36143492)
chr8 (74-268)||(29520584-29520764)
chr8 (82-223)||(32043522-32043659)
chr8 (81-257)||(10080086-10080256)
chr8 (89-222)||(15853691-15853823)
chr8 (75-255)||(33511285-33511457)
chr8 (158-249)||(12611539-12611630)
chr8 (74-223)||(36395162-36395308)
chr8 (62-132)||(6510726-6510796)
chr8 (161-238)||(29645044-29645121)
chr8 (114-249)||(9695595-9695726)
chr8 (62-220)||(36565457-36565612)
chr8 (74-133)||(28300411-28300470)
chr8 (158-205)||(41444557-41444604)
chr8 (90-223)||(18474173-18474298)
chr8 (169-223)||(23023258-23023312)
chr8 (75-143)||(16252860-16252929)
chr8 (158-223)||(18125177-18125242)
chr8 (113-280)||(11733710-11733873)
chr8 (158-222)||(40813328-40813392)
chr8 (81-223)||(45419170-45419306)
chr8 (89-143)||(16705701-16705756)
chr8 (168-247)||(17491810-17491889)
chr8 (168-223)||(35643814-35643869)
chr8 (62-223)||(36545058-36545218)
chr8 (99-268)||(43904833-43905000)
chr8 (74-205)||(45512726-45512854)
chr8 (178-280)||(30559717-30559819)
chr8 (89-200)||(7103201-7103316)
chr8 (158-223)||(12491351-12491416)
chr8 (81-157)||(16351321-16351398)
chr8 (62-133)||(30783339-30783411)
chr8 (89-143)||(36069582-36069637)
chr8 (62-132)||(37077676-37077747)
chr8 (74-133)||(38667478-38667537)
chr8 (75-126)||(43732492-43732543)
chr8 (169-223)||(1549590-1549644)
chr8 (74-143)||(30456500-30456569)
chr8 (185-238)||(9905079-9905132)
chr8 (74-157)||(33666773-33666855)
chr8 (170-238)||(13589502-13589570)
chr8 (168-232)||(30748471-30748535)
chr8 (161-205)||(42493537-42493581)
chr8 (74-110)||(44681398-44681434)
[»] chr7 (59 HSPs)
chr7 (74-281)||(47848598-47848801)
chr7 (158-281)||(26742051-26742174)
chr7 (75-262)||(48736073-48736256)
chr7 (74-281)||(36101920-36102123)
chr7 (62-281)||(36514362-36514576)
chr7 (74-238)||(36136688-36136848)
chr7 (62-223)||(31005134-31005292)
chr7 (75-157)||(39811882-39811965)
chr7 (74-223)||(34869344-34869489)
chr7 (158-264)||(40169653-40169759)
chr7 (62-268)||(1740708-1740915)
chr7 (81-268)||(46356024-46356207)
chr7 (62-143)||(27021994-27022077)
chr7 (62-223)||(35906414-35906572)
chr7 (74-223)||(37617868-37618014)
chr7 (62-223)||(45836693-45836851)
chr7 (62-223)||(49029187-49029345)
chr7 (74-223)||(13859221-13859366)
chr7 (172-249)||(35713713-35713790)
chr7 (158-223)||(36869457-36869522)
chr7 (81-268)||(28628101-28628284)
chr7 (62-223)||(43281587-43281743)
chr7 (75-249)||(43282330-43282503)
chr7 (62-200)||(30200199-30200330)
chr7 (62-223)||(38606916-38607073)
chr7 (158-249)||(42187474-42187565)
chr7 (74-232)||(25579281-25579429)
chr7 (158-223)||(6374872-6374937)
chr7 (172-281)||(38135368-38135476)
chr7 (81-223)||(33072885-33073021)
chr7 (62-223)||(11593871-11594029)
chr7 (158-233)||(19262636-19262711)
chr7 (94-133)||(47796437-47796476)
chr7 (179-281)||(6420645-6420747)
chr7 (161-215)||(27893769-27893823)
chr7 (62-142)||(28542173-28542254)
chr7 (158-224)||(38920798-38920864)
chr7 (74-223)||(39906583-39906728)
chr7 (90-223)||(44855385-44855514)
chr7 (178-268)||(48202870-48202960)
chr7 (158-223)||(12841488-12841553)
chr7 (158-223)||(12966026-12966091)
chr7 (78-142)||(25826759-25826824)
chr7 (158-223)||(31682815-31682880)
chr7 (87-223)||(41948453-41948585)
chr7 (158-222)||(2885936-2886000)
chr7 (160-220)||(7189442-7189502)
chr7 (158-222)||(27021906-27021970)
chr7 (89-263)||(8492406-8492576)
chr7 (74-143)||(14593685-14593755)
chr7 (81-222)||(28020895-28021032)
chr7 (82-132)||(29653854-29653904)
chr7 (74-132)||(36651918-36651976)
chr7 (75-124)||(37595630-37595679)
chr7 (91-143)||(40139204-40139257)
chr7 (184-252)||(9797888-9797956)
chr7 (74-110)||(16013208-16013244)
chr7 (169-205)||(28542127-28542163)
chr7 (159-223)||(29650389-29650453)
[»] chr2 (46 HSPs)
chr2 (66-281)||(38434866-38435079)
chr2 (76-268)||(9556537-9556724)
chr2 (89-265)||(43752118-43752290)
chr2 (174-268)||(3481161-3481255)
chr2 (158-268)||(12141548-12141658)
chr2 (158-268)||(18958911-18959025)
chr2 (62-223)||(41763255-41763412)
chr2 (62-132)||(16097290-16097361)
chr2 (62-223)||(38429795-38429953)
chr2 (81-249)||(42092450-42092612)
chr2 (74-231)||(40759023-40759177)
chr2 (114-254)||(13240927-13241063)
chr2 (62-223)||(8180691-8180849)
chr2 (74-129)||(9647908-9647963)
chr2 (62-223)||(36183362-36183520)
chr2 (177-254)||(12026187-12026264)
chr2 (89-133)||(21834492-21834536)
chr2 (81-223)||(3866003-3866141)
chr2 (162-232)||(14197366-14197437)
chr2 (89-155)||(41858679-41858746)
chr2 (74-129)||(45077672-45077727)
chr2 (81-232)||(7825289-7825438)
chr2 (78-257)||(23714440-23714612)
chr2 (78-257)||(24102112-24102284)
chr2 (74-132)||(41779606-41779664)
chr2 (158-267)||(6218971-6219080)
chr2 (158-223)||(25834685-25834750)
chr2 (74-142)||(44411640-44411709)
chr2 (158-238)||(11017318-11017398)
chr2 (119-238)||(37481815-37481930)
chr2 (182-254)||(42149828-42149900)
chr2 (158-205)||(11412725-11412772)
chr2 (90-223)||(12734641-12734768)
chr2 (209-268)||(45077810-45077869)
chr2 (159-205)||(12882271-12882317)
chr2 (62-222)||(41197442-41197599)
chr2 (74-132)||(41779032-41779090)
chr2 (169-223)||(41779521-41779575)
chr2 (158-223)||(2610592-2610657)
chr2 (158-223)||(3243866-3243931)
chr2 (158-223)||(38452898-38452963)
chr2 (159-204)||(38860178-38860223)
chr2 (81-133)||(9579000-9579052)
chr2 (89-133)||(17581407-17581451)
chr2 (168-268)||(41858745-41858845)
chr2 (158-254)||(44411716-44411812)
[»] chr4 (72 HSPs)
chr4 (74-257)||(54470131-54470310)
chr4 (81-204)||(33709850-33709974)
chr4 (62-223)||(31960027-31960185)
chr4 (62-238)||(29398730-29398902)
chr4 (92-223)||(51252674-51252799)
chr4 (73-133)||(2588904-2588964)
chr4 (168-268)||(47611741-47611841)
chr4 (158-265)||(28497494-28497600)
chr4 (62-143)||(45185305-45185388)
chr4 (76-133)||(17668410-17668467)
chr4 (158-231)||(28236187-28236260)
chr4 (6-141)||(34233323-34233458)
chr4 (158-234)||(30621406-30621482)
chr4 (160-232)||(42639224-42639296)
chr4 (91-232)||(50662330-50662466)
chr4 (88-142)||(10208976-10209031)
chr4 (162-221)||(56225074-56225133)
chr4 (167-269)||(45185194-45185296)
chr4 (74-223)||(56375214-56375359)
chr4 (62-197)||(12494661-12494793)
chr4 (72-133)||(17666341-17666402)
chr4 (81-141)||(20105761-20105822)
chr4 (75-131)||(17900405-17900461)
chr4 (62-223)||(23906508-23906672)
chr4 (158-222)||(31459034-31459098)
chr4 (170-238)||(38903918-38903986)
chr4 (158-238)||(41192840-41192920)
chr4 (62-223)||(43433829-43433993)
chr4 (158-254)||(43562691-43562787)
chr4 (62-223)||(48622756-48622912)
chr4 (161-205)||(49987435-49987479)
chr4 (75-223)||(50471453-50471595)
chr4 (62-223)||(436140-436298)
chr4 (74-231)||(1777222-1777373)
chr4 (194-281)||(13805420-13805507)
chr4 (62-223)||(33191061-33191219)
chr4 (62-223)||(33227120-33227278)
chr4 (62-132)||(35690215-35690286)
chr4 (159-254)||(46715554-46715649)
chr4 (89-223)||(52569728-52569858)
chr4 (81-222)||(37797783-37797920)
chr4 (158-268)||(53707798-53707908)
chr4 (158-204)||(55768733-55768779)
chr4 (158-204)||(55832989-55833035)
chr4 (158-223)||(26037718-26037783)
chr4 (81-205)||(44047579-44047699)
chr4 (161-267)||(50680746-50680853)
chr4 (169-257)||(31339552-31339639)
chr4 (1-132)||(45205148-45205278)
chr4 (74-133)||(21106908-21106967)
chr4 (158-281)||(35555802-35555925)
chr4 (74-133)||(45423543-45423602)
chr4 (194-281)||(54934940-54935027)
chr4 (168-254)||(1427466-1427552)
chr4 (157-223)||(7092433-7092499)
chr4 (74-133)||(11389644-11389705)
chr4 (92-130)||(20998954-20998992)
chr4 (158-232)||(42293453-42293527)
chr4 (89-142)||(43070053-43070107)
chr4 (74-143)||(44667530-44667600)
chr4 (75-129)||(44860779-44860833)
chr4 (158-231)||(20591505-20591578)
chr4 (89-157)||(51841465-51841534)
chr4 (159-223)||(4440858-4440922)
chr4 (81-133)||(18966484-18966536)
chr4 (76-143)||(25967555-25967623)
chr4 (161-205)||(26356626-26356670)
chr4 (159-223)||(38570960-38571024)
chr4 (158-222)||(39100749-39100813)
chr4 (93-133)||(42618817-42618857)
chr4 (89-133)||(44360022-44360066)
chr4 (158-254)||(49738786-49738882)
[»] chr1 (66 HSPs)
chr1 (158-268)||(48431574-48431684)
chr1 (95-281)||(35828705-35828887)
chr1 (81-238)||(43423648-43423803)
chr1 (158-268)||(2544603-2544713)
chr1 (158-238)||(36340001-36340081)
chr1 (62-223)||(1210656-1210814)
chr1 (101-232)||(1661377-1661508)
chr1 (62-223)||(15085845-15086003)
chr1 (62-223)||(30202343-30202501)
chr1 (159-223)||(13827930-13827994)
chr1 (161-249)||(32404713-32404801)
chr1 (62-223)||(696180-696338)
chr1 (81-143)||(40920825-40920888)
chr1 (74-223)||(9509242-9509387)
chr1 (158-268)||(40416375-40416485)
chr1 (74-223)||(49347606-49347751)
chr1 (74-223)||(51440978-51441123)
chr1 (80-133)||(16273119-16273172)
chr1 (62-223)||(8391683-8391841)
chr1 (62-223)||(9592645-9592803)
chr1 (62-155)||(40419550-40419645)
chr1 (74-143)||(4379929-4379999)
chr1 (171-281)||(8796226-8796336)
chr1 (74-203)||(9599627-9599752)
chr1 (81-131)||(35672619-35672669)
chr1 (75-132)||(16822319-16822376)
chr1 (181-265)||(9002379-9002463)
chr1 (170-254)||(14226011-14226095)
chr1 (170-222)||(41611822-41611874)
chr1 (169-257)||(52837540-52837628)
chr1 (158-281)||(5338728-5338851)
chr1 (81-222)||(8671851-8671986)
chr1 (162-281)||(13827725-13827844)
chr1 (170-249)||(46388392-46388471)
chr1 (163-249)||(990646-990732)
chr1 (74-223)||(4001668-4001813)
chr1 (162-220)||(7921843-7921901)
chr1 (74-132)||(19936446-19936504)
chr1 (65-205)||(32082976-32083113)
chr1 (74-231)||(32231159-32231312)
chr1 (74-223)||(34792562-34792707)
chr1 (98-223)||(39140468-39140589)
chr1 (158-223)||(51602060-51602125)
chr1 (75-155)||(52442780-52442861)
chr1 (92-131)||(27703951-27703990)
chr1 (74-133)||(52633471-52633530)
chr1 (81-142)||(4590813-4590875)
chr1 (172-238)||(17815490-17815556)
chr1 (75-133)||(39422340-39422398)
chr1 (209-267)||(43375756-43375814)
chr1 (168-238)||(51812539-51812609)
chr1 (81-130)||(6641063-6641112)
chr1 (168-249)||(17275210-17275291)
chr1 (74-131)||(34827403-34827460)
chr1 (157-205)||(2500067-2500115)
chr1 (158-254)||(3819038-3819134)
chr1 (158-222)||(4380017-4380081)
chr1 (78-130)||(4781305-4781357)
chr1 (78-106)||(12230955-12230983)
chr1 (181-265)||(16272992-16273076)
chr1 (74-197)||(16943099-16943218)
chr1 (74-130)||(17143179-17143235)
chr1 (74-110)||(26016361-26016397)
chr1 (171-223)||(26016454-26016506)
chr1 (96-143)||(33561077-33561125)
chr1 (97-204)||(52561843-52561946)
[»] chr3 (48 HSPs)
chr3 (74-281)||(42510171-42510369)
chr3 (93-268)||(39600849-39601020)
chr3 (82-262)||(36820135-36820309)
chr3 (89-263)||(19736935-19737106)
chr3 (89-263)||(19757838-19758009)
chr3 (92-267)||(45289260-45289434)
chr3 (83-237)||(49503753-49503903)
chr3 (158-277)||(41842670-41842789)
chr3 (62-223)||(52138711-52138869)
chr3 (74-223)||(49841535-49841688)
chr3 (89-268)||(344879-345054)
chr3 (89-206)||(31337756-31337867)
chr3 (62-223)||(47233809-47233967)
chr3 (74-223)||(54128302-54128447)
chr3 (158-223)||(50960846-50960911)
chr3 (62-143)||(50621648-50621731)
chr3 (62-222)||(51447924-51448080)
chr3 (74-143)||(38054625-38054695)
chr3 (74-142)||(2341003-2341072)
chr3 (194-279)||(30572956-30573040)
chr3 (170-238)||(39235154-39235222)
chr3 (158-205)||(26490319-26490366)
chr3 (158-237)||(27917574-27917653)
chr3 (74-220)||(28245361-28245503)
chr3 (62-223)||(54278931-54279089)
chr3 (168-254)||(21200562-21200648)
chr3 (168-254)||(42026718-42026804)
chr3 (81-131)||(46431972-46432022)
chr3 (161-224)||(3987054-3987117)
chr3 (62-132)||(33272328-33272399)
chr3 (170-249)||(44443391-44443470)
chr3 (81-132)||(45236787-45236838)
chr3 (62-132)||(45728057-45728128)
chr3 (62-143)||(46568027-46568110)
chr3 (89-202)||(50249320-50249432)
chr3 (74-223)||(21997-22141)
chr3 (75-133)||(11663574-11663632)
chr3 (168-222)||(48734349-48734403)
chr3 (158-223)||(5168836-5168901)
chr3 (170-223)||(11581460-11581513)
chr3 (75-124)||(19676398-19676447)
chr3 (160-205)||(26388487-26388532)
chr3 (158-223)||(35033150-35033215)
chr3 (158-223)||(38060435-38060500)
chr3 (158-219)||(38430852-38430913)
chr3 (168-205)||(44134061-44134098)
chr3 (168-224)||(33272234-33272290)
chr3 (168-284)||(46140446-46140562)
[»] chr6 (31 HSPs)
chr6 (75-223)||(33083983-33084127)
chr6 (74-192)||(12134145-12134259)
chr6 (98-249)||(2079288-2079435)
chr6 (74-268)||(9593874-9594070)
chr6 (62-223)||(5258361-5258521)
chr6 (62-223)||(28085287-28085445)
chr6 (81-143)||(33998292-33998355)
chr6 (62-130)||(31818449-31818518)
chr6 (81-132)||(7513283-7513334)
chr6 (158-280)||(14389324-14389445)
chr6 (62-205)||(9706687-9706827)
chr6 (162-254)||(24665818-24665911)
chr6 (170-238)||(43250-43318)
chr6 (62-132)||(608070-608141)
chr6 (94-133)||(8364520-8364559)
chr6 (62-223)||(20427849-20428007)
chr6 (74-143)||(5129125-5129195)
chr6 (160-254)||(6907009-6907103)
chr6 (80-122)||(7150628-7150670)
chr6 (162-283)||(6293539-6293660)
chr6 (64-223)||(30031169-30031325)
chr6 (62-132)||(10100157-10100228)
chr6 (161-231)||(26291788-26291856)
chr6 (196-281)||(579460-579545)
chr6 (62-110)||(4948629-4948678)
chr6 (62-110)||(4955600-4955649)
chr6 (168-205)||(5897483-5897520)
chr6 (84-133)||(10617525-10617574)
chr6 (170-251)||(18905894-18905974)
chr6 (171-232)||(29020111-29020171)
chr6 (81-133)||(9568591-9568643)
[»] chr5 (55 HSPs)
chr5 (89-225)||(6888932-6889064)
chr5 (158-283)||(43475244-43475369)
chr5 (74-155)||(28186944-28187026)
chr5 (161-281)||(7359415-7359534)
chr5 (174-281)||(21093772-21093879)
chr5 (72-249)||(10082926-10083098)
chr5 (89-205)||(14667696-14667814)
chr5 (162-281)||(79521-79640)
chr5 (62-223)||(2075687-2075845)
chr5 (80-142)||(9234999-9235062)
chr5 (91-143)||(683980-684033)
chr5 (62-223)||(16347591-16347749)
chr5 (74-221)||(21952275-21952424)
chr5 (74-222)||(1275189-1275332)
chr5 (74-143)||(11002709-11002779)
chr5 (74-268)||(41109908-41110099)
chr5 (168-254)||(42199300-42199386)
chr5 (158-223)||(20456777-20456842)
chr5 (158-206)||(27897-27945)
chr5 (81-143)||(5305547-5305610)
chr5 (74-133)||(7678404-7678463)
chr5 (75-141)||(21093701-21093768)
chr5 (62-223)||(24178421-24178579)
chr5 (170-280)||(30588465-30588573)
chr5 (75-133)||(6368224-6368282)
chr5 (158-223)||(1287792-1287857)
chr5 (93-238)||(4026533-4026673)
chr5 (158-223)||(4496388-4496453)
chr5 (170-251)||(18131921-18132002)
chr5 (158-223)||(28676599-28676664)
chr5 (158-223)||(28977072-28977137)
chr5 (158-223)||(31636133-31636198)
chr5 (89-204)||(32516497-32516606)
chr5 (158-223)||(33667220-33667285)
chr5 (158-223)||(38684971-38685036)
chr5 (170-251)||(43522623-43522704)
chr5 (74-157)||(219727-219811)
chr5 (75-131)||(16134480-16134536)
chr5 (158-238)||(27249224-27249304)
chr5 (62-132)||(1287889-1287960)
chr5 (158-205)||(15168796-15168843)
chr5 (158-249)||(37124571-37124662)
chr5 (62-107)||(5848401-5848447)
chr5 (158-220)||(25937973-25938035)
chr5 (173-223)||(27998478-27998528)
chr5 (170-204)||(29938131-29938165)
chr5 (81-142)||(30588384-30588446)
chr5 (158-223)||(3301848-3301913)
chr5 (184-281)||(15986892-15986989)
chr5 (62-110)||(34272933-34272982)
chr5 (158-223)||(34273031-34273096)
chr5 (170-231)||(43558032-43558093)
chr5 (194-254)||(9235104-9235164)
chr5 (74-110)||(27998347-27998383)
chr5 (74-110)||(43558136-43558172)
[»] scaffold0018 (3 HSPs)
scaffold0018 (158-281)||(44023-44146)
scaffold0018 (81-223)||(31399-31537)
scaffold0018 (74-133)||(44170-44229)
[»] scaffold0570 (1 HSPs)
scaffold0570 (158-223)||(1161-1226)
[»] scaffold0157 (1 HSPs)
scaffold0157 (89-197)||(25684-25788)


Alignment Details
Target: chr8 (Bit Score: 223; Significance: 1e-123; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 2518821 - 2518533
Alignment:
Q  1 accgacgatgttgtatggaacagagagttgggcagtgaagaaccaatatgagnnnnnnnnntaagtgtagcgggatgagaatgttgcattggatgtgtgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||    
T  2518821 accgacgatgttgtatggaacagagagttgggcagtgaagaaccaatatgagaaaaaaaa-taagtgtagcgggatgagaatgttgcattggatgtgtgg 2518723  T
Q  101 taagactagatgagataggattagaaatgacaaattagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaataggtttaggtg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||| ||||||||||||||||||||||||||||||||||    
T  2518722 taagactagatgagataggattagaaatgacaaattagagagaaaattggggtagca-----cctcaagtagaaaagatggtggaaaataggtttaggtg 2518628  T
Q  201 gtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtctggtcactagaggaattccttgaaaaa 295  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  2518627 gtttgattatgtagagagaagacttgtagattttgtaggaaagagagtatatcaaattgaggatagtctgaacactagaggaagtccttgaaaaa 2518533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 13172007 - 13171880
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    ||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||||| | ||||||      |||||||| |||||    
T  13172007 gatgagaatgttgcattggatgtgtagtaagactagacgggataggattagaaatgacaagattagagagagagttgggg-----aagcacctatagtag 13171913  T
Q  173 aaaagatggtggaaaataggtttaggtggtttg 205  Q
    |||||||||||||||||| | ||||||||||||    
T  13171912 aaaagatggtggaaaatatgcttaggtggtttg 13171880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 268
Target Start/End: Complemental strand, 10824511 - 10824332
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagat 179  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||||| | || |||||||||    ||| || ||||     |||||||||||||||||    
T  10824511 atgttgcattggacgtgtggtaagactagatgggatatgattagaaataaaaatattagagag----ttgaggcagca-----cctaaagtagaaaagat 10824421  T
Q  180 ggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtc 268  Q
    ||| ||||||||| ||||||||||||  ||| |||||| |||||| ||||||||||||| |  ||||||| ||||||| ||||||||||    
T  10824420 ggtcgaaaataggcttaggtggtttgggtatttagagaaaagactcatagattttgtagtatggagagtagatcaaatggaggatagtc 10824332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 44373780 - 44373890
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    ||||||||||||||||||||||||||||||||||| ||  |||||||||  ||||||||  ||||| |||||||||||||| |||||||||| |||||||    
T  44373780 tagcacctaaagtagaaaagatggtggaaaataggcttgagtggtttgagcatgtagagtaaagacctatagattttgtagtaaagagagtagatcaaat 44373879  T
Q  258 tgaggatagtc 268  Q
     ||||||||||    
T  44373880 agaggatagtc 44373890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 254
Target Start/End: Complemental strand, 44681387 - 44681221
Alignment:
Q  84 ttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggt 182  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||| | ||| ||     ||||||||| | |||||||||||||    
T  44681387 ttgcattggatgtgtggtaagactagacgagataagattagaaatgacaacattagagagacagttgtgg-----tagcacctataatagaaaagatggt 44681293  T
Q  183 ggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatca 254  Q
    |||||||| | ||||  ||||||   || |||||||||||| |||||||| || || || ||||||| ||||    
T  44681292 ggaaaataagcttagaaggtttggaaatctagagagaagacctatagattctgcagcaatgagagtagatca 44681221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 74 - 254
Target Start/End: Complemental strand, 41972132 - 41971960
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| |||||| |||||||||||| ||||| || ||||||||| ||||||||||| || ||||||||||       | |||  || ||||||| ||||    
T  41972132 gatgaggatgttgtattggatgtgtgataagatta-atgagatagaattagaaatgagaatattagagaga-------gttagggtaacacctaa-gtag 41972042  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatca 254  Q
    |||||||||||||||||| ||||||||||||||   ||||||||||||||| | |||||||| ||| || ||||||| ||||    
T  41972041 aaaagatggtggaaaataagtttaggtggtttggacatgtagagagaagacgtgtagattttctagcaaggagagtagatca 41971960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 8879811 - 8879653
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||||| ||||||||||||||| | |||  ||||||||||| ||  |||||||||||| ||||||| ||||||||||| ||| ||||      |    
T  8879811 taagtgtagcggagatgagaatgttgcacttgataagtggtaagactggactagataggattaggaatgacacaattagagagagaatggggg-----aa 8879717  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| ||||||||  |||| || ||||  ||||||||||||||||    
T  8879716 gcacctatagtagaaaagttggtagaaaatagacttagatgatttgggtatgtagagagaagac 8879653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 268
Target Start/End: Original strand, 16917108 - 16917297
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||||||||||| |||  | |||||||||||| |    |||||||||| ||||||||| ||||| || ||| ||||||||| |     || |||||||    
T  16917108 gatgagaatgttgcgttgactttgtggtaagactcggctggataggattaaaaatgacaacattagtgataaagttggggtagta-----ccgaaagtag 16917202  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtc 268  Q
    ||||||||||| ||| |||| ||||||||||||   ||||| ||||||| ||| |||| ||||||| || ||||||| |||| |||||||||||||    
T  16917203 aaaagatggtgcaaactaggcttaggtggtttgggcatgtaaagagaaggcttgtaga-tttgtagtaaggagagtagatcagattgaggatagtc 16917297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 281
Target Start/End: Original strand, 36143293 - 36143492
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| ||||||  ||||  ||||||||||||||||||||||||||||||||| || || |||||||||    | | |||||||     |||| || ||    
T  36143293 gatgaggatgttgtgttggtcgtgtggtaagactagatgagataggattagaaaggaaaagattagagag----tcgaggtagca-----cctatagcag 36143383  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtctggt 272  Q
    || ||||||||||||||||  ||||||||||||   || |||||| ||||| |||||||| ||||| |  ||||||| ||||||| |||||||||| | |    
T  36143384 aatagatggtggaaaatagacttaggtggtttgggcatttagagaaaagacctatagattctgtagtatggagagtagatcaaatggaggatagtcagat 36143483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 74 - 268
Target Start/End: Original strand, 29520584 - 29520764
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||| |  |||||||||| | ||||||| ||||     ||| |||||    
T  29520584 gatgaggatgttgcgttggatgtgtggtaagactagatgggataggattagaaatgataccattagagagagagttggggtggcat-----ctatagtag 29520678  T
Q  173 aaa-agatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtc 268  Q
    ||| | ||||||||||           |||||||   ||||||||||||||||| |||||||||||| || ||||||| |||| || ||||||||||    
T  29520679 aaataaatggtggaaa-----------tggtttgggcatgtagagagaagacttgtagattttgtagtaaggagagtagatcagatggaggatagtc 29520764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 82 - 223
Target Start/End: Original strand, 32043522 - 32043659
Alignment:
Q  82 tgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatg 180  Q
    |||||| |||||||||||||||||||||| | ||||| |||||||||||||| |||||||||| | ||||||     || |||||| |||| ||||||||    
T  32043522 tgttgcgttggatgtgtggtaagactagacgggatagaattagaaatgacaacattagagagagagttgggg-----tatcacctatagtacaaaagatg 32043616  T
Q  181 gtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    || |||| |||  || |||||||||   |||||||||||||||    
T  32043617 gtagaaactagactttggtggtttggccatgtagagagaagac 32043659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 257
Target Start/End: Complemental strand, 10080256 - 10080086
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagat 179  Q
    ||||||| |||| ||| ||||||||||||| |||||| ||||||||||||||| |||||||||| | ||| ||||||||     || |||||||||||||    
T  10080256 atgttgcgttgggtgtttggtaagactagacgagataagattagaaatgacaacattagagagagagttgaggtagcat-----ct-aagtagaaaagat 10080163  T
Q  180 ggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    |||||||| ||||  | | |||||||   ||||||||||||||| |   |||||||||| || ||||||| |||||||    
T  10080162 ggtggaaactaggcct-gatggtttgggcatgtagagagaagacctgaggattttgtagtaaggagagtagatcaaat 10080086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 222
Target Start/End: Complemental strand, 15853823 - 15853691
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgacaaattagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaa 188  Q
    ||||||||||| |||||  | |||||||| |||||||||||| |||||||||| | | ||||||| |   |||||||| |||||||||||| ||| ||||    
T  15853823 ttggatgtgtgataagaagatatgagataagattagaaatgaaaaattagagatagagttggggtgggc-agcacctatagtagaaaagatcgtgaaaaa 15853725  T
Q  189 taggtttaggtggtttgattatgtagagagaaga 222  Q
    | ||||||||||||||   | |||||||||||||    
T  15853724 tgggtttaggtggttttggtgtgtagagagaaga 15853691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 255
Target Start/End: Original strand, 33511285 - 33511457
Alignment:
Q  75 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtaga 173  Q
    ||||| |||||||  | ||||||||||||||||| |||||||| |||||||||||| || |||||||||    |||||||| ||     ||||  |||||    
T  33511285 atgaggatgttgcgcttgatgtgtggtaagactatatgagatatgattagaaatgaaaatattagagag----ttggggtaaca-----cctatggtaga 33511375  T
Q  174 aaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaa 255  Q
    ||| ||| || |||||||  ||||||||||||| |||  ||||||||||| |||||||| |||||  ||||||||| |||||    
T  33511376 aaaaatgatgaaaaatagacttaggtggtttgagtatacagagagaagacctatagattctgtagttaagagagtagatcaa 33511457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 12611539 - 12611630
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagta 249  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||  |||||||| |||| || | | |||| | ||| ||||||||||    
T  12611539 tagcacctaaagtagaaaagatggtggaaactaggcttaggtggtttgcgtatgtagacagaacacctgtggattatatagtaaagagagta 12611630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 223
Target Start/End: Complemental strand, 36395308 - 36395162
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | ||||     ||||||||| |||||    
T  36395308 gatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtggggg-----tagcacctatagtag 36395214  T
Q  173 aaaagatggtggaaaatagg-tttaggtggtttgattatgtagagagaagac 223  Q
    ||||| |||| ||||||||| ||||| |||||||   |||||||||||||||    
T  36395213 aaaagttggtagaaaataggctttagatggtttgggcatgtagagagaagac 36395162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 6510796 - 6510726
Alignment:
Q  62 taagtgtagcgggatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 132  Q
    |||||||||||||||||  ||||||  ||||||  ||||||||||||||||||||| ||||||||||||||    
T  6510796 taagtgtagcgggatgatgatgttgtgttggataagtggtaagactagatgagatatgattagaaatgaca 6510726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 29645044 - 29645121
Alignment:
Q  161 cacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtag 238  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||   ||||| ||||||||| ||||||||||||||    
T  29645044 cacctatagtataaaagatggtggaaaataggtttaattggtttggacatgtaaagagaagacctatagattttgtag 29645121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 249
Target Start/End: Original strand, 9695595 - 9695726
Alignment:
Q  114 gataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgt 212  Q
    ||||| |||||||||||||| |||| ||||| | |||||||||||     |||| |||||||||||||||||||| | || ||||||||||||   ||||    
T  9695595 gatagaattagaaatgacaacattatagagatatttggggtagca-----cctatagtagaaaagatggtggaaactcggcttaggtggtttgggcatgt 9695689  T
Q  213 agagagaagacttatagattttgtaggaaagagagta 249  Q
    ||||||||| | | |||||| || || ||||||||||    
T  9695690 agagagaagtcctgtagattctgaagtaaagagagta 9695726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 220
Target Start/End: Complemental strand, 36565612 - 36565457
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||| ||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | ||||     ||    
T  36565612 taagtgtagcagagatgaggatgatgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtggggg-----ta 36565518  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaa 220  Q
    ||||||| |||||||||| |||| ||||||||| |||| |||||||   ||||||||||||    
T  36565517 gcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 36565457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 28300470 - 28300411
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    |||||| ||||||  |||||||||| |||||||||||||||||| |||||||||||||||    
T  28300470 gatgaggatgttgtgttggatgtgtagtaagactagatgagataagattagaaatgacaa 28300411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 41444604 - 41444557
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttg 205  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  41444604 tagcacctatagtagaaaagatggtggaaactaggtttaggtggtttg 41444557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 223
Target Start/End: Complemental strand, 18474298 - 18474173
Alignment:
Q  90 tggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaa 188  Q
    ||||||||||||||| ||||||| ||||| | |||||||||||| |||||||||          |||  ||||||||| |||||||| |||||||||||     
T  18474298 tggatgtgtggtaaggctagatgtgatagaaatagaaatgacaatattagagagt---------tagagtagcacctatagtagaaatgatggtggaaac 18474208  T
Q  189 taggtttaggtggtttgattatgtagagagaagac 223  Q
    |||| |||| ||||||||  |||||||||||||||    
T  18474207 taggcttagttggtttgagcatgtagagagaagac 18474173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 223
Target Start/End: Original strand, 23023258 - 23023312
Alignment:
Q  169 gtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||||||| ||||| |||| |||||| |||||||||||||||||||||||    
T  23023258 gtagaaaagatgggggaaactaggcttaggtagtttgattatgtagagagaagac 23023312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 16252860 - 16252929
Alignment:
Q  75 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 143  Q
    ||||| ||||||  ||||||||||||||||| |||||||||||  |||||||||||||| ||||||||||    
T  16252860 atgaggatgttgtgttggatgtgtggtaagattagatgagataaaattagaaatgacaacattagagaga 16252929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 18125177 - 18125242
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| |||||||||| |||| ||||||||| |||| ||||||||  |||||||||||||||    
T  18125177 tagcacctatagtagaaaagttggtagaaaataggcttagatggtttgaacatgtagagagaagac 18125242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 280
Target Start/End: Original strand, 11733710 - 11733873
Alignment:
Q  113 agataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatg 211  Q
    ||||||||||||||||||||| |||||||| | | |||||     ||| ||||||   ||||| |||||||||||| |||  ||| ||||||||||  ||    
T  11733710 agataggattagaaatgacaacattagagaaagagttggg-----ataacacctatgatagaatagatggtggaaactagagttaagtggtttgatcttg 11733804  T
Q  212 tagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtctggtcactagag 280  Q
    | ||||||||| || ||||| |||||| || ||||||| ||||  | |||||||||| | |||||||||    
T  11733805 ttgagagaagatttgtagatgttgtagtaaggagagtagatcacgtggaggatagtcagatcactagag 11733873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 40813328 - 40813392
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaaga 222  Q
    ||||||||| |||||||||| |||| |||||||||||||| |||||||   ||||||||||||||    
T  40813328 tagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaaga 40813392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 45419170 - 45419306
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtagaaaagat 179  Q
    ||||||| ||||||  |||||||||||||| | |||| |||||| |||||||  |||||||||  ||||||||     ||||||||| ||||||||||||    
T  45419170 atgttgcgttggattagtggtaagactagaagggataagattaggaatgacaccattagagag--aattgggg-----tagcacctatagtagaaaagat 45419262  T
Q  180 ggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    |||  |||||||  ||||||||||||   ||||||||| |||||    
T  45419263 ggtataaaatagacttaggtggtttgggcatgtagagataagac 45419306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 16705701 - 16705756
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 143  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  16705701 ttggttgtgtggtaagactagatgggatagaattagaaatgacaacattagagaga 16705756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 17491889 - 17491810
Alignment:
Q  168 agtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagag 247  Q
    ||||||||| |||||||| ||||   ||||||||||||  |||||||||||||||| |||| ||||||||| || |||||    
T  17491889 agtagaaaatatggtggacaataaacttaggtggtttgggtatgtagagagaagacctatacattttgtagtaaggagag 17491810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 35643869 - 35643814
Alignment:
Q  168 agtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||||||||||||||||| | ||||||||||||   |||||||||||||||    
T  35643869 agtagaaaagatggtggaaaatatgcttaggtggtttgggcatgtagagagaagac 35643814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 36545058 - 36545218
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaa-attggggtagcat 158  Q
    |||||||||| | |||||| ||||||  ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | |||||     |    
T  36545058 taagtgtagcagagatgaggatgttgtgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagagtggggg----t 36545153  T
Q  159 agcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    | |||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  36545154 aacacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 36545218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 268
Target Start/End: Complemental strand, 43905000 - 43904833
Alignment:
Q  99 ggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaatag---gtt 194  Q
    ||||||||||||||| ||||||| | ||||||||| |||||||||  | |||| |||||||     ||| |||||||||||||| ||||||||    | |    
T  43905000 ggtaagactagatgaaataggataaaaaatgacaacattagagaggta-ttggcgtagcat-----ctatagtagaaaagatggaggaaaataataagct 43904907  T
Q  195 taggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtc 268  Q
    |||||||||||   ||||||||||||||| ||||||| |||||| ||  ||| || |||| || ||||||||||    
T  43904906 taggtggtttggacatgtagagagaagacctatagatgttgtagtaagaagaatagatcagatggaggatagtc 43904833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 45512854 - 45512726
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-att--agagagaaaattggggtagcatagcacctaaagt 170  Q
    |||||||||||| | ||||||||||||||||||||||| || |||| |||||||||| || |||  ||||||  | ||||||     ||||||||| |||    
T  45512854 gatgagaatgtttcgttggatgtgtggtaagactagat-aggtagggttagaaatgaaaatattaaagagagggagttgggg-----tagcacctatagt 45512761  T
Q  171 agaaaagatggtggaaaataggtttaggtggtttg 205  Q
    |||||||||| ||||||||| | |||| |||||||    
T  45512760 agaaaagatgatggaaaataagcttagatggtttg 45512726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 280
Target Start/End: Original strand, 30559717 - 30559819
Alignment:
Q  178 atggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtctggtcacta 277  Q
    ||||| ||||||||| ||||||||||||   || |||||||||||| | |||||||||||| || || |||  |||| || |||||||||| | ||||||    
T  30559717 atggtcgaaaataggcttaggtggtttgggcatttagagagaagacatgtagattttgtagtaaggacagtggatcagatggaggatagtcggatcacta 30559816  T
Q  278 gag 280  Q
    |||    
T  30559817 gag 30559819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 200
Target Start/End: Original strand, 7103201 - 7103316
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggta---gcatagcacctaaagtagaaaagatggtgg 184  Q
    |||||||||  |||| ||||||||||||||||||| ||||||||| |||||||| | | |  |||||   |  ||||||||| ||||||||||||||| |    
T  7103201 ttggatgtgctgtaaaactagatgagataggattataaatgacaacattagagatagagtcagggtagacggttagcacctatagtagaaaagatggtag 7103300  T
Q  185 aaaataggtttaggtg 200  Q
    ||| |||| |||||||    
T  7103301 aaactaggcttaggtg 7103316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 12491416 - 12491351
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  12491416 tagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 12491351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 16351321 - 16351398
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagca 157  Q
    ||||||| |||||| ||||||||||||||| |  ||||  ||||||||||||| |||||||||| |||| ||||||||    
T  16351321 atgttgcgttggatatgtggtaagactagacggaatagagttagaaatgacaacattagagagagaattagggtagca 16351398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 30783411 - 30783339
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    ||||||||| || |||||| || |||| |||||| ||||| ||||||||||  ||||||||||||||||||||    
T  30783411 taagtgtagtggagatgaggatcttgcgttggatctgtggcaagactagataggataggattagaaatgacaa 30783339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 36069582 - 36069637
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 143  Q
    |||||||||||||||||||||| | |||| ||||||||| ||||| ||||||||||    
T  36069582 ttggatgtgtggtaagactagacgggataagattagaaacgacaacattagagaga 36069637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 37077676 - 37077747
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 132  Q
    ||||||| |||| |||||| |||||||  |||||| ||||||| |||||| ||||||||||||| |||||||    
T  37077676 taagtgtggcggagatgaggatgttgcgctggatgagtggtaaaactagacgagataggattaggaatgaca 37077747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 38667478 - 38667537
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    |||| ||||||||  ||||| ||||||||| | |||||||||||||||||| ||||||||    
T  38667478 gatgggaatgttgtgttggacgtgtggtaaaagtagatgagataggattagtaatgacaa 38667537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 43732492 - 43732543
Alignment:
Q  75 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaa 126  Q
    ||||| ||||| | |||||||||||||||||||||||| ||||| |||||||    
T  43732492 atgaggatgttacgttggatgtgtggtaagactagatgtgatagaattagaa 43732543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 1549644 - 1549590
Alignment:
Q  169 gtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||||||| ||||| |||| |||||| ||||||  |||||||||||||||    
T  1549644 gtagaaaagatgggggaaactaggcttaggtagtttgagcatgtagagagaagac 1549590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 30456569 - 30456500
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgac-aaattagagaga 143  Q
    |||||| ||||||| |||||||||||||||||| | ||| ||||| |||||||||||| | ||||||||||    
T  30456569 gatgaggatgttgcgttggatgtgtggtaagacca-atgggatagaattagaaatgacgacattagagaga 30456500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 9905132 - 9905079
Alignment:
Q  185 aaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtag 238  Q
    |||||||| ||||||||||||   ||||||||||||||||| ||||| ||||||    
T  9905132 aaaataggcttaggtggtttggacatgtagagagaagacttgtagatgttgtag 9905079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 33666855 - 33666773
Alignment:
Q  74 gatgagaatgttgcattggatgtgtgg-taagactagatgagataggattagaaatgacaaattagagagaaaattggggtagca 157  Q
    ||||||||| ||  ||||||||||||| |||| ||||||||||||||||||  ||||||  || ||||||| | |||||||||||    
T  33666855 gatgagaatattttattggatgtgtgggtaaggctagatgagataggattaagaatgac--ataagagagagagttggggtagca 33666773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 13589502 - 13589570
Alignment:
Q  170 tagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtag 238  Q
    ||||||| ||||| ||||||| | |||||||||||||  |||| ||||||||||  |||||| ||||||    
T  13589502 tagaaaatatggtagaaaatatgattaggtggtttgaacatgttgagagaagaccgatagatgttgtag 13589570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 30748471 - 30748535
Alignment:
Q  168 agtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagatt 232  Q
    |||||||||||||||||||   ||| ||||||||||||   ||||||||||||||| | ||||||    
T  30748471 agtagaaaagatggtggaatcaaggcttaggtggtttgggcatgtagagagaagacctgtagatt 30748535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 42493581 - 42493537
Alignment:
Q  161 cacctaaagtagaaaagatggtggaaaataggtttaggtggtttg 205  Q
    |||||| |||||||||||| ||||||| |||| ||||||||||||    
T  42493581 cacctatagtagaaaagattgtggaaactaggcttaggtggtttg 42493537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 44681434 - 44681398
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactaga 110  Q
    |||||| |||||| |||||||||||||||||||||||    
T  44681434 gatgaggatgttgtattggatgtgtggtaagactaga 44681398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 281
Target Start/End: Original strand, 47848598 - 47848801
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| ||||||  |||||||||||||||||||||| | |||||||| |||| ||| || |||||||||| | ||||||||||      |||| |||||    
T  47848598 gatgaggatgttgtgttggatgtgtggtaagactagacgggataggatcagaagtgataacattagagagagagttggggtagcg-----cctatagtag 47848692  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtctggt 272  Q
    |||||||||||||||||||| ||||||||||||   |||| |||||||||||| || ||| ||||  || ||||||| |||| || |||||||||||| |    
T  47848693 aaaagatggtggaaaataggcttaggtggtttgggcatgtcgagagaagacttgtaaattctgtactaaggagagtagatcagatggaggatagtctgat 47848792  T
Q  273 cactagagg 281  Q
    |||||||||    
T  47848793 cactagagg 47848801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 26742174 - 26742051
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||  ||||||||| | ||| |||||||||||| | || ||||||| |||| ||    
T  26742174 tagcacctatagtagaaaagatggtggaaaataggattaggtggtttgaacatgtagagaaacgacctatagattttgtggtaaggagagtagatcagat 26742075  T
Q  258 tgaggatagtctggtcactagagg 281  Q
     ||| |||||| | ||||||||||    
T  26742074 agagaatagtcagatcactagagg 26742051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 262
Target Start/End: Complemental strand, 48736256 - 48736073
Alignment:
Q  75 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgac-aaattagagagaaaattggggtagcatagcacctaaagtaga 173  Q
    ||||| ||||||| ||| |||||||||||||||||||||||||  |||||||||||| | |||| ||||| | ||||||     ||||||||| ||||||    
T  48736256 atgaggatgttgcgttgaatgtgtggtaagactagatgagataaaattagaaatgacgacattatagagagagttgggg-----tagcacctacagtaga 48736162  T
Q  174 aaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgagg 262  Q
    ||||||||  |||| |||  |||||||||||| | |||||||| |||||| | | |||| |||||  | ||||||| ||||||| ||||    
T  48736161 aaagatgggagaaactagacttaggtggtttgctcatgtagagcgaagacctgtggattatgtagttaggagagtagatcaaatggagg 48736073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 74 - 281
Target Start/End: Complemental strand, 36102123 - 36101920
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    ||||| |||||||  || ||||||||||||||||||||| |||  ||||||||||||||| ||| ||| ||| | ||    |   ||||||||| | |||    
T  36102123 gatgaaaatgttgagttcgatgtgtggtaagactagatgggatgagattagaaatgacaacatttgag-gaagagtg----aaggtagcacctataatag 36102029  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtctggt 272  Q
    |||||||| ||||||||||| ||||||||||||   ||||||||||||||| |||||||||||||  |  ||||||| |||| || ||| |||||| | |    
T  36102028 aaaagatgttggaaaataggcttaggtggtttggggatgtagagagaagacctatagattttgtaacagggagagtagatcatatggagaatagtcagat 36101929  T
Q  273 cactagagg 281  Q
    |||||||||    
T  36101928 cactagagg 36101920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 36514576 - 36514362
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||| |||||||||||||||||||| | | ||||| |||||||| ||||| ||||||||||   |||||||||||      
T  36514576 taagtgtagcagagatgaggatgttgcgttggatgtgtggtaagactaaacgggatagaattagaaaggacaacattagagagag--ttggggtagca-- 36514481  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattg 259  Q
       |||| ||||||||||||||| |||| |||  ||||||||||||   ||||||||||| ||||| | |||| ||||| |  ||||||| |||| || |    
T  36514480 ---cctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagacgacttgtggattctgtagtatggagagtagatcagatag 36514384  T
Q  260 aggatagtctggtcactagagg 281  Q
    |||  ||||  |||||||||||    
T  36514383 aggggagtcaagtcactagagg 36514362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 238
Target Start/End: Original strand, 36136688 - 36136848
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||||||||||  ||||||| |||||||||||||| | |||||| |||| |||||||  |||||||||| | |||||||||||     |||| |||||    
T  36136688 gatgagaatgttgtgttggatgggtggtaagactagaagggataggtttaggaatgacaccattagagagagagttggggtagca-----cctatagtag 36136782  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtag 238  Q
    |||||||||| ||||||||  |||||| |||||   || ||||||||| || ||||||| ||||||    
T  36136783 aaaagatggtagaaaatagtcttaggttgtttgggcatatagagagaatacctatagatgttgtag 36136848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 31005134 - 31005292
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| ||| |||  |||||||||| | | ||||     ||    
T  31005134 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaataacaccattagagagagagtggggg-----ta 31005228  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| |||||||||||||| |||||||   |||||||||||||||    
T  31005229 gcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaagac 31005292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 39811882 - 39811965
Alignment:
Q  75 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagca 157  Q
    ||||| ||||||| |||||||||||||||||||||| | |||||||||||||||||||| |||||||||| | |||||| ||||    
T  39811882 atgaggatgttgctttggatgtgtggtaagactagacgtgataggattagaaatgacaacattagagagagagttggggcagca 39811965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 74 - 223
Target Start/End: Original strand, 34869344 - 34869489
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | ||||     ||||||||| |||||    
T  34869344 gatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtggggg-----tagcacctatagtag 34869438  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  34869439 aaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 34869489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 158 - 264
Target Start/End: Original strand, 40169653 - 40169759
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||||   ||||||||| |||||   ||||||||||  ||| ||||||| |||||||    
T  40169653 tagcacttatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagataagacacgtagattttgtgtgaaggagagtagatcaaat 40169752  T
Q  258 tgaggat 264  Q
     ||||||    
T  40169753 ggaggat 40169759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 268
Target Start/End: Original strand, 1740708 - 1740915
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||| |||||||||| |||||||||| || | || |||||||||||| || |||||||||| |   | | | |  ||    
T  1740708 taagtgtagcagagatgaggatgttgcgttggatgtgtagtaagactaggtggggtaagattagaaatgagaacattagagagagaga-gagtttgggta 1740806  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattg 259  Q
    ||| ||| ||||||||| |||||||||| |||| ||||||||||||  |||||||| || ||| || | |||||||||| || ||||||| |||| || |    
T  1740807 gcatctacagtagaaaatatggtggaaactaggcttaggtggtttgggtatgtagataggagaattgtggattttgtagtaaggagagtagatcagatgg 1740906  T
Q  260 aggatagtc 268  Q
    ||| |||||    
T  1740907 agggtagtc 1740915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 268
Target Start/End: Complemental strand, 46356207 - 46356024
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtagaaaagat 179  Q
    ||||||| ||| ||| ||||||||||||||   ||||||||||| |||||||  || ||||||| ||| ||||     ||||||||| |||||||||| |    
T  46356207 atgttgcgttgaatgagtggtaagactagacaggataggattaggaatgacaccatcagagagagaatggggg-----tagcacctatagtagaaaagtt 46356113  T
Q  180 ggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtc 268  Q
    ||| |||||||||||||| |||||||   |||||||||||||||   ||||| |||| | ||  |||||| ||||||| ||||| ||||    
T  46356112 ggtagaaaataggtttagatggtttgggcatgtagagagaagacacgtagatgttgtggtaagaagagtagatcaaatggaggagagtc 46356024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 143
Target Start/End: Complemental strand, 27022077 - 27021994
Alignment:
Q  62 taagtgtagcggga-tgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 143  Q
    |||||||||||| | |||||||||||||||||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||    
T  27022077 taagtgtagcggcaatgagaatgttgcattggatgtgtgataagactagacaggataggattaaaaatgacaacattagagaga 27021994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 35906572 - 35906414
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | | |||||||      
T  35906572 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtggaggtagca-- 35906475  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
       |||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  35906474 ---cctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 35906414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 223
Target Start/End: Original strand, 37617868 - 37618014
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| ||||||| ||||||| ||||||||||||||  |||||||||||| |||||||  |||||||||| | | ||||     ||||||||| |||||    
T  37617868 gatgaggatgttgcgttggatgagtggtaagactagacaagataggattaggaatgacaccattagagagagagtggggg-----tagcacctatagtag 37617962  T
Q  173 aaaagatggt-ggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||| |||| | |||||||| |||| |||||||   |||||||||||||||    
T  37617963 aaaagttggtagaaaaataggcttagatggtttgggcatgtagagagaagac 37618014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 45836851 - 45836693
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||| ||||| |||||| |||||||  |||||| ||||||||| ||||  |||||||||||| |||||||  |||||||||| | | ||||     ||    
T  45836851 taagtgcagcggagatgaggatgttgcgctggatgagtggtaagagtagacaagataggattaggaatgacaccattagagagagagtggggg-----ta 45836757  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  45836756 gcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagac 45836693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 49029187 - 49029345
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||| | ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | ||||     ||    
T  49029187 taagtgtagcagagatgaggatgttacgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtggggg-----ta 49029281  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  49029282 gcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 49029345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 223
Target Start/End: Complemental strand, 13859366 - 13859221
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| ||||||| ||||| | ||||||||||||||   ||||||||||| |||||||  |||||||||| | | ||||     ||||||||| |||||    
T  13859366 gatgaggatgttgcgttggacgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtggggg-----tagcacctatagtag 13859272  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  13859271 aaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 13859221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 35713713 - 35713790
Alignment:
Q  172 gaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagta 249  Q
    ||||| ||||||||||||||| ||||||||||||   ||||||||||||||||| || ||||||||| || |||||||    
T  35713713 gaaaaaatggtggaaaataggcttaggtggtttgggcatgtagagagaagacttgtacattttgtagtaaggagagta 35713790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 36869522 - 36869457
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| |||||||||| |||| |||||||||||||| ||||||| | |||||||||||||||    
T  36869522 tagcacctatagtagaaaagttggtagaaaataggtttagatggtttggtcatgtagagagaagac 36869457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 268
Target Start/End: Complemental strand, 28628284 - 28628101
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagat 179  Q
    ||||||| |||||||| ||||||||| | | | ||| ||||||||||| |||| |||||||||  | |||| ||||||     |||| |||||||| |||    
T  28628284 atgttgccttggatgtatggtaagaccatacgggatgggattagaaattacaacattagagagggagttggagtagca-----cctagagtagaaatgat 28628190  T
Q  180 ggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtc 268  Q
    |||||||||| || ||||||||||||   ||||| |||||| || | |||||| ||||| || ||||||| |||  || ||||||||||    
T  28628189 ggtggaaaattggcttaggtggtttgggcatgtaaagagaaaacctgtagattatgtagtaaggagagtagatccgatggaggatagtc 28628101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 43281587 - 43281743
Alignment:
Q  62 taagtgtagcggg-atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcata 159  Q
    ||||||||||||| ||||| |||||||  |||||| ||||||||||||||  | |||||||||| |||||||  ||||||||||    |||||     ||    
T  43281587 taagtgtagcggggatgaggatgttgcgctggatgagtggtaagactagacaatataggattaggaatgacaccattagagagag---tggggg----ta 43281679  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  43281680 gcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagac 43281743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 249
Target Start/End: Original strand, 43282330 - 43282503
Alignment:
Q  75 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-att---agagagaaaattggggtagcatagcacctaaagt 170  Q
    ||||| ||||||| || ||||||||||||| |||||   |||| ||||||||||||||| |||   ||||||| | |||||||||||     |||| |||    
T  43282330 atgaggatgttgcgttagatgtgtggtaagtctagacatgatatgattagaaatgacaacatttagagagagagagttggggtagca-----cctatagt 43282424  T
Q  171 agaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagta 249  Q
    |||||||  |||||||| |||| |||||||  |||   |||||||||||||||||  ||||| |||||||| |||||||    
T  43282425 agaaaagtcggtggaaactaggcttaggtgaattgggcatgtagagagaagacttgcagattctgtaggaaggagagta 43282503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 200
Target Start/End: Complemental strand, 30200330 - 30200199
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||  ||||||||||||||||| |||||| |||| ||||||||||||||| |||||||||    || |||     ||    
T  30200330 taagtgtagcagagatgaggatgttgtgttggatgtgtggtaagattagatgggatatgattagaaatgacaacattagagag----ttaggg-----ta 30200240  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtg 200  Q
     |||||| |||||||||||||||||||| |||| |||||||    
T  30200239 acacctatagtagaaaagatggtggaaactaggcttaggtg 30200199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 38606916 - 38607073
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcata 159  Q
    |||||||||||| ||||| ||||||||  |||||| ||||||||||||||   ||||||||||| |||||||| |||| ||||| | | ||||     ||    
T  38606916 taagtgtagcggagatgataatgttgcgctggatgagtggtaagactagacatgataggattaggaatgacaacatta-agagagagtggggg-----ta 38607009  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||| | |||| ||||||||| |||| |||||||   |||||||||||||||    
T  38607010 gcacctatagtagaaaggttggtagaaaataggcttagatggtttggacatgtagagagaagac 38607073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 42187474 - 42187565
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagta 249  Q
    ||||||||| | ||||||||||||||||||||||| ||||||||||||   ||||| ||||||| | | |||||| ||||| || |||||||    
T  42187474 tagcacctataatagaaaagatggtggaaaataggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagta 42187565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 232
Target Start/End: Complemental strand, 25579429 - 25579281
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| ||||||| ||||||||||||||| |||||||     ||||||||||||||| | ||||||||||    ||||| ||  ||||||| | || ||    
T  25579429 gatgaggatgttgcgttggatgtgtggtaatactagat-----aggattagaaatgaccacattagagagag---tgggg-ag--tagcacccatagcag 25579341  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagatt 232  Q
    |||| ||||||||||||||| ||||||||||||   ||||||||||||||| | ||||||    
T  25579340 aaaaaatggtggaaaataggcttaggtggtttggggatgtagagagaagacatgtagatt 25579281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 6374872 - 6374937
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| |||||||||| |||| ||||||||| |||| ||||||||  |||||||||||||||    
T  6374872 tagcacctatagtagaaaagttggtagaaaataggcttagatggtttgagcatgtagagagaagac 6374937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 281
Target Start/End: Complemental strand, 38135476 - 38135368
Alignment:
Q  172 gaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtctgg 271  Q
    ||||||||||||||||||||| ||||||||||||   ||||||| |||||||   |||||||||||| || |||| || |||| || |||||||||| |     
T  38135476 gaaaagatggtggaaaataggcttaggtggtttggacatgtagacagaagaccagtagattttgtagtaaggaga-tagatcagatggaggatagtcaga 38135378  T
Q  272 tcactagagg 281  Q
    ||| ||||||    
T  38135377 tcattagagg 38135368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 33072885 - 33073021
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtagaaaagat 179  Q
    ||||||| ||||||| ||||||||||||||  |||||||||||| |||||||  |||||||||   | |||||     ||||||||| |||||||||| |    
T  33072885 atgttgcgttggatgagtggtaagactagacaagataggattaggaatgacaccattagagag---agtgggg----gtagcacctatagtagaaaagtt 33072977  T
Q  180 ggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||| ||||||||| |||| || ||||   |||||||||||||||    
T  33072978 ggtagaaaataggcttagatgatttgggcatgtagagagaagac 33073021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 11593871 - 11594029
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   |||| |||||| |||||||  ||| |||||| | | |||||||||      
T  11593871 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataagattaggaatgacaccatttgagagagagtgggggtagca-- 11593968  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
       |||| |||||||||| |||| ||||||| | |||| |||||||   |||||||||||||||    
T  11593969 ---cctatagtagaaaagttggtagaaaatacggttagatggtttgggcatgtagagagaagac 11594029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 19262711 - 19262636
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattt 233  Q
    |||||||||  |||||||||||||| |||| | || |||||||||||||  ||||||||||||||| | |||||||    
T  19262711 tagcacctattgtagaaaagatggtagaaacttggcttaggtggtttgagcatgtagagagaagacctgtagattt 19262636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 47796476 - 47796437
Alignment:
Q  94 tgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  47796476 tgtgtggtaagactagatgggataggattagaaatgacaa 47796437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 6420747 - 6420645
Alignment:
Q  179 tggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtctggtcactag 278  Q
    ||||||||| |||| ||||||||||||   ||||||||||||||||| |||||  ||||| || ||||||| |||| ||  | ||||||| | |||||||    
T  6420747 tggtggaaactaggcttaggtggtttgggcatgtagagagaagacttgtagatactgtagtaaggagagtagatcagatgaatgatagtcagatcactag 6420648  T
Q  279 agg 281  Q
    |||    
T  6420647 agg 6420645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 27893823 - 27893769
Alignment:
Q  161 cacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtaga 215  Q
    |||||| ||||||| ||||||||||||||||| |||||||||||||  |||||||    
T  27893823 cacctatagtagaatagatggtggaaaataggcttaggtggtttgaacatgtaga 27893769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 28542254 - 28542173
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 142  Q
    |||||||||||| ||||||  |||||| ||||||||||||||||||||| || ||||| |||||||||| ||| |||||||||    
T  28542254 taagtgtagcggagatgagggtgttgcgttggatgtgtggtaagactag-tgggatagaattagaaatggcaatattagagag 28542173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 38920798 - 38920864
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagact 224  Q
    ||||||||| |||||||||||||||||||| |||| ||| ||||||||   ||||||||||| ||||    
T  38920798 tagcacctatagtagaaaagatggtggaaactaggcttaagtggtttgggcatgtagagagatgact 38920864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 223
Target Start/End: Complemental strand, 39906728 - 39906583
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| ||| ||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | |  ||||||||     |||| |||||    
T  39906728 gatgaggatgctgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtgagggtagca-----cctatagtag 39906634  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||| |||| ||||||||| |||| || ||||   |||||||||||||||    
T  39906633 aaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagac 39906583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 223
Target Start/End: Complemental strand, 44855514 - 44855385
Alignment:
Q  90 tggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaa 188  Q
    |||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | |||     |||| ||||| |||||||||| |||| |||||    
T  44855514 tggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggg-----atagtacctatagtagaaaagttggtagaaaa 44855420  T
Q  189 taggtttaggtggtttgattatgtagagagaagac 223  Q
    |||| |||| |||||||   |||||||||||||||    
T  44855419 taggcttagatggtttgggcatgtagagagaagac 44855385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 48202960 - 48202870
Alignment:
Q  178 atggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtc 268  Q
    |||||||||  |||| ||||||||||||   ||||||||||||||||| |||||| ||||| || ||||||| |||| || | ||||||||    
T  48202960 atggtggaatctaggcttaggtggtttgcgcatgtagagagaagacttgtagattctgtagtaaggagagtagatcatatggtggatagtc 48202870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 12841553 - 12841488
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  12841553 tagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 12841488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 12966026 - 12966091
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| || ||||||||||||||||| || | ||||||||||||   |||||||||||||||    
T  12966026 tagcacctatagaagaaaagatggtggaaactatgcttaggtggtttgggcatgtagagagaagac 12966091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 25826824 - 25826759
Alignment:
Q  78 agaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 142  Q
    ||||||||| ||||||| ||||||||||| | | ||||||||||||||||||| || |||||||||    
T  25826824 agaatgttgtattggatatgtggtaagaccatacgagataggattagaaatgaaaacattagagag 25826759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 31682880 - 31682815
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    |||||| || |||||||||| |||| ||||||||| |||| |||||||  ||||||||||||||||    
T  31682880 tagcacatatagtagaaaagttggtagaaaataggcttagatggtttgggtatgtagagagaagac 31682815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 41948453 - 41948585
Alignment:
Q  87 cattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtgga 185  Q
    |||||||||| || ||| |||| | |||||| ||||||||||||||| ||||||| || | |||| ||||||     | || | ||||||||||||||||    
T  41948453 cattggatgtctgataaaactaaacgagatacgattagaaatgacaacattagagtgagagttggcgtagca-----cttacaatagaaaagatggtgga 41948547  T
Q  186 aaataggtttaggtggtttgattatgtagagagaagac 223  Q
    || |||| ||| ||||||||   |||||||||||||||    
T  41948548 aactaggcttaagtggtttgggcatgtagagagaagac 41948585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 2886000 - 2885936
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaaga 222  Q
    ||||||||| |||||||||| |||| ||||||||| |||| |||||||   ||||||||||||||    
T  2886000 tagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 2885936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 7189502 - 7189442
Alignment:
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaa 220  Q
    ||||||| ||||||||||||||| ||||||| | ||||||||||||   ||||||||||||    
T  7189502 gcacctatagtagaaaagatggtagaaaataagcttaggtggtttgggcatgtagagagaa 7189442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 27021970 - 27021906
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaaga 222  Q
    ||||||||| |||||||||| ||||| ||| |||| ||||||||||||   ||||||||||||||    
T  27021970 tagcacctatagtagaaaagttggtgaaaactaggcttaggtggtttgggcatgtagagagaaga 27021906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 263
Target Start/End: Complemental strand, 8492576 - 8492406
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaa 187  Q
    ||||||| |||| ||||||||| | ||||||||||  |||||||  ||||| |||| | |||||||| ||     |||| |||| ||| |||||| ||||    
T  8492576 ttggatgagtggcaagactagacgggataggattacgaatgacaccattagggagagatttggggtaaca-----cctatagtaaaaatgatggtagaaa 8492482  T
Q  188 ataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgagga 263  Q
    ||||| | |||||||||||   |||||||| ||||||| ||||| |||||| | | |||||| |||| || |||||    
T  8492481 ataggctaaggtggtttgaacttgtagagaaaagacttgtagatgttgtagtacaaagagtagatcagatggagga 8492406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 143
Target Start/End: Original strand, 14593685 - 14593755
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 143  Q
    |||||| ||||||| |||||||||||||||||||||| |  |  | |||||||||||||| ||||||||||    
T  14593685 gatgaggatgttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagaga 14593755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 28020895 - 28021032
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagat 179  Q
    |||||||||| |||||||| ||||||| ||   |||| |||| ||||||| || |||||||| | | |||||||||||     | ||  |||||||||||    
T  28020895 atgttgcattagatgtgtgataagactggacatgatatgattcgaaatgataacattagagaaagagttggggtagca-----cttatcgtagaaaagat 28020989  T
Q  180 ggtggaaaataggtttaggtggtttgattatgtagagagaaga 222  Q
    |||||||| | || ||||||||||||   ||||||||||||||    
T  28020990 ggtggaaacttggcttaggtggtttgggcatgtagagagaaga 28021032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 29653904 - 29653854
Alignment:
Q  82 tgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 132  Q
    |||||| ||||||||||||||| |||||| | ||||| |||||||||||||    
T  29653904 tgttgcgttggatgtgtggtaacactagacgggatagaattagaaatgaca 29653854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 36651918 - 36651976
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 132  Q
    |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||    
T  36651918 gatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgaca 36651976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 37595630 - 37595679
Alignment:
Q  75 atgagaatgttgcattggatgtgtggtaagactagatgagataggattag 124  Q
    ||||||||||||||||| || ||| |||||||||||  ||||||||||||    
T  37595630 atgagaatgttgcattgaatatgtagtaagactagacaagataggattag 37595679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 40139257 - 40139204
Alignment:
Q  91 ggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 143  Q
    |||||||||||||||||||| | |||| ||||||||| ||||| ||||||||||    
T  40139257 ggatgtgtggtaagactagacgggataagattagaaaagacaacattagagaga 40139204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 9797956 - 9797888
Alignment:
Q  184 gaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatat 252  Q
    |||||| || ||||||||||||   ||||||||||||||||| ||||||||| || || ||| ||||||    
T  9797956 gaaaattggcttaggtggtttggacatgtagagagaagacttgtagattttgaagtaaggagcgtatat 9797888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 16013208 - 16013244
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactaga 110  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  16013208 gatgaggatgttgcgttggatgtgtggtaagactaga 16013244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 28542163 - 28542127
Alignment:
Q  169 gtagaaaagatggtggaaaataggtttaggtggtttg 205  Q
    |||||||||||||||||||||||  ||||||||||||    
T  28542163 gtagaaaagatggtggaaaatagccttaggtggtttg 28542127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 29650389 - 29650453
Alignment:
Q  159 agcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    |||||||| |||||||||  |||| ||||||||| |||| |||||||   |||||||||||||||    
T  29650389 agcacctatagtagaaaaattggtagaaaataggcttagatggtttggacatgtagagagaagac 29650453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 281
Target Start/End: Original strand, 38434866 - 38435079
Alignment:
Q  66 tgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcac 163  Q
    |||||||| |||||| ||||||||||||||| ||||||| |||||| |||| | ||||||||||||||| |||||||||| ||||||||     ||||||    
T  38434866 tgtagcggagatgaggatgttgcattggatgcgtggtaaaactagacgagagaagattagaaatgacaacattagagagagaattgggg-----tagcac 38434960  T
Q  164 ctaaagtagaaaagatggtggaaaatag-gtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgagg 262  Q
    ||| |||||||||||||||||||| |||  ||| |||||||||   ||||| ||||||||||| |||||  | ||| || ||||||| |||| || ||||    
T  38434961 ctatagtagaaaagatggtggaaactagactttgggtggtttgggcatgtaaagagaagacttgtagatgctttagtaaggagagtagatcatatggagg 38435060  T
Q  263 atagtctggtcactagagg 281  Q
    |||||| | ||||||||||    
T  38435061 atagtcagatcactagagg 38435079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 76 - 268
Target Start/End: Complemental strand, 9556724 - 9556537
Alignment:
Q  76 tgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaa 174  Q
    |||| ||||||  ||||||||||||||||| |||| | |||| ||||||||||||||| |||||||||||| ||||||     || ||| || |||||||    
T  9556724 tgaggatgttgtgttggatgtgtggtaagattagacgggatatgattagaaatgacaacattagagagaaagttgggg-----taacacttatagtagaa 9556630  T
Q  175 aagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtc 268  Q
    || ||||||||||||||| |||||||||||    |||||||||||||||   |||||| ||||| ||  | ||||||||| || ||||||||||    
T  9556629 aa-atggtggaaaataggcttaggtggtttaggcatgtagagagaagacaagtagattctgtagtaagaaaagtatatcagatggaggatagtc 9556537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 265
Target Start/End: Complemental strand, 43752290 - 43752118
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaa 187  Q
    ||||||||| ||||| || ||||| |||| |||||||| |||| | |||||||||| | |||||||||||     |||| |||||||||| |||| ||||    
T  43752290 ttggatgtgcggtaaaaccagatgggataagattagaactgaccatattagagagagagttggggtagca-----cctatagtagaaaaggtggtagaaa 43752196  T
Q  188 ataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggata 265  Q
    ||||| ||||||| ||||   ||||||||||||||| |||||||| ||||| |  ||||||| |||| || |||||||    
T  43752195 ataggcttaggtgatttggacatgtagagagaagacctatagattatgtagtagggagagtagatcagatggaggata 43752118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 268
Target Start/End: Original strand, 3481161 - 3481255
Alignment:
Q  174 aaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtc 268  Q
    ||||||||||||||| ||| ||||||||||||   ||||||||||||||| |||||||| ||||| || ||||||| |||| || ||||||||||    
T  3481161 aaagatggtggaaaacaggcttaggtggtttggacatgtagagagaagacctatagattctgtagcaaggagagtagatcagatggaggatagtc 3481255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 12141548 - 12141658
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||   | ||||| ||||||| | |||||| | ||| || ||||||| |||| ||    
T  12141548 tagcacctatagtagaaaagatggtggaaaagaggcttaggtggtttgggcacgtagaaagaagacctgtagattctctagtaaggagagtagatcagat 12141647  T
Q  258 tgaggatagtc 268  Q
    |||||||||||    
T  12141648 tgaggatagtc 12141658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 18958911 - 18959025
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgatt----atgtagagagaagacttatagattttgtaggaaagagagtatatc 253  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||| ||    ||| ||||||||||| |  || |||||||| || ||||||| |||    
T  18958911 tagcacctatagtagaaaagatggtggaaaataggcttaggtggtttggttgggcatgcagagagaagacctgcagcttttgtagtaaggagagtagatc 18959010  T
Q  254 aaattgaggatagtc 268  Q
    | || ||||||||||    
T  18959011 agatggaggatagtc 18959025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 41763412 - 41763255
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||||| |||||| |||||||  |||||| ||||||||||||||  |||||||||||| |||||||  |||||||||| | | |||      ||    
T  41763412 taagtgtagcggagatgaggatgttgcgatggatgagtggtaagactagacaagataggattaggaatgacaccattagagagagagtgggg------ta 41763319  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
     |||||| |||||||||| |||| ||||||||| ||||||||||||   ||| |||||||||||    
T  41763318 acacctatagtagaaaagttggtagaaaataggcttaggtggtttggacatgcagagagaagac 41763255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 16097361 - 16097290
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 132  Q
    |||||||||||| |||||| |||||||| |||||| |||||||||||||||| |||| ||||||||||||||    
T  16097361 taagtgtagcggagatgaggatgttgcactggatgagtggtaagactagatgggatatgattagaaatgaca 16097290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 38429795 - 38429953
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||||| |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | ||||      |    
T  38429795 taagtgtagcggagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtggggg-----ca 38429889  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| ||||||||| |||| |||||||   ||||| |||||||||    
T  38429890 gcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtaaagagaagac 38429953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 42092450 - 42092612
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagat 179  Q
    |||||||||||||||||| ||||||||||| | |||| |||||||||||||||  ||||||||  | ||||||     |||| |||| | ||||||||||    
T  42092450 atgttgcattggatgtgtagtaagactagacgggatatgattagaaatgacaatgttagagag--agttgggg-----tagcgcctatactagaaaagat 42092542  T
Q  180 ggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagta 249  Q
    ||| |||| || | ||||||| | ||   ||||||||||||| ||| |||||||||||| || |||||||    
T  42092543 ggtagaaactaagattaggtgatctgggcatgtagagagaaggcttgtagattttgtagtaaggagagta 42092612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 74 - 231
Target Start/End: Original strand, 40759023 - 40759177
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| ||||| || | ||||||  |||||||||||  ||||| ||||||||||||||| |||||||||| |  | ||||    |||||| || |||||    
T  40759023 gatgaggatgtttcactagatgtggtgtaagactagacaagataagattagaaatgacaacattagagagagaggttgggt----tagcacttatagtag 40759118  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagat 231  Q
    |||| |||||||||| |||  ||||||||||||   ||||||||||||||||| |||||    
T  40759119 aaaaaatggtggaaactagagttaggtggtttgtgcatgtagagagaagacttttagat 40759177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 254
Target Start/End: Complemental strand, 13241063 - 13240927
Alignment:
Q  114 gataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgt 212  Q
    |||||||||||||||||||| |||||||||| |||||| |||||| || |  |    |||||||||||||||||| |||| ||||||||||||   ||||    
T  13241063 gataggattagaaatgacaacattagagagagaattggagtagca-agtatgt----tagaaaagatggtggaaactaggcttaggtggtttgggcatgt 13240969  T
Q  213 agagagaagacttatagattttgtaggaaagagagtatatca 254  Q
    ||||||||||| | |||||| | ||| || ||||||| ||||    
T  13240968 agagagaagacatgtagattctttagtaaggagagtagatca 13240927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 8180691 - 8180849
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||  ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | ||||     ||    
T  8180691 taagtgtagcagagatgaggatgttgtgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtggggg-----ta 8180785  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| ||||||| | |||| |||||||   |||||||||||||||    
T  8180786 gcacctatagtagaaaagttggtagaaaataagcttagatggtttgggcatgtagagagaagac 8180849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 129
Target Start/End: Complemental strand, 9647963 - 9647908
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatg 129  Q
    |||||| ||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  9647963 gatgaggatgttgcgttggatgtgtggtaagactagatgtgataagattagaaatg 9647908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 36183362 - 36183520
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| ||||||| ||||||||||| | | ||||     ||    
T  36183362 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacacaattagagagagagtagggg-----ta 36183456  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| |||||||   |||| ||||||    |||||||||||||||    
T  36183457 gcacctatagtagaaaagttggtagaaaataatcttagttggtttcggcatgtagagagaagac 36183520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 254
Target Start/End: Complemental strand, 12026264 - 12026187
Alignment:
Q  177 gatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatca 254  Q
    ||||||||||| |||| |||||||||||||  ||||||||||||||| | |||||||||||  || ||||||| ||||    
T  12026264 gatggtggaaactaggcttaggtggtttgaccatgtagagagaagacctgtagattttgtactaaggagagtagatca 12026187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 21834492 - 21834536
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||    
T  21834492 ttggatgtgtggtaagactagatgagataagattagaaattacaa 21834536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 3866003 - 3866141
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagat 179  Q
    ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  ||| |||||| | | |||||||||     |||| |||| ||||| |    
T  3866003 atgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattggagagagagtgggggtagca-----cctatagtaaaaaagtt 3866097  T
Q  180 ggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||| ||||||||| |||| |||||||   |||||||||||||||    
T  3866098 ggtagaaaataggcttagatggtttgtgcatgtagagagaagac 3866141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 14197437 - 14197366
Alignment:
Q  162 acctaaagtagaaaagatggtggaaaatagg-tttaggtggtttgattatgtagagagaagacttatagatt 232  Q
    ||||| |||||||||||||||||||| |||| |||||||||||||   |||||||| |||||||| ||||||    
T  14197437 acctatagtagaaaagatggtggaaactaggctttaggtggtttgggcatgtagagtgaagacttgtagatt 14197366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 155
Target Start/End: Original strand, 41858679 - 41858746
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtag 155  Q
    |||||||||||||||||||  ||||||   ||||||||||||||| |||||||||| |||||||||||    
T  41858679 ttggatgtgtggtaagactgtatgagacgtgattagaaatgacaacattagagagagaattggggtag 41858746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 129
Target Start/End: Original strand, 45077672 - 45077727
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatg 129  Q
    |||||| ||||||| ||||||||||||||||||||||  |||||| ||||||||||    
T  45077672 gatgaggatgttgcgttggatgtgtggtaagactagactagatagaattagaaatg 45077727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 232
Target Start/End: Original strand, 7825289 - 7825438
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtagaaaagat 179  Q
    ||||||| ||||||||||||||||||||||   |||| ||||||||||||||  |||||||||| |   | | | |  ||||||||| ||| | ||| ||    
T  7825289 atgttgcgttggatgtgtggtaagactagactggatatgattagaaatgacactattagagagaga---gtgttggagtagcacctatagttgtaaatat 7825385  T
Q  180 ggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagatt 232  Q
    |||| |||||| | |||| ||||||||  ||||||||||||||| | ||||||    
T  7825386 ggtgaaaaataagcttagttggtttgagcatgtagagagaagacatgtagatt 7825438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 257
Target Start/End: Complemental strand, 23714612 - 23714440
Alignment:
Q  78 agaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaa 176  Q
    |||||||||  ||||||||||||||||||||||  | ||||||||| ||||||| | |||||| |||   |||||      |||||| || |||||||||    
T  23714612 agaatgttgtgttggatgtgtggtaagactagacaaaataggattaaaaatgacgacattagatagag--ttggg------tagcacatatagtagaaaa 23714521  T
Q  177 gatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    ||||||||||| |||  ||| || ||||    ||||||||||||||||| | |||| ||||| || ||||||| |||||||    
T  23714520 gatggtggaaactagacttatgtagtttaggcatgtagagagaagacttgtggattatgtagtaaggagagtagatcaaat 23714440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 257
Target Start/End: Complemental strand, 24102284 - 24102112
Alignment:
Q  78 agaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaa 176  Q
    |||||||||  ||||||||||||||||||||||  | ||||||||| ||||||| | |||||| |||   |||||      |||||| || |||||||||    
T  24102284 agaatgttgtgttggatgtgtggtaagactagacaaaataggattaaaaatgacgacattagatagag--ttggg------tagcacatatagtagaaaa 24102193  T
Q  177 gatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    ||||||||||| |||  ||| || ||||    ||||||||||||||||| | |||| ||||| || ||||||| |||||||    
T  24102192 gatggtggaaactagacttatgtagtttaggcatgtagagagaagacttgtggattatgtagtaaggagagtagatcaaat 24102112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 41779664 - 41779606
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 132  Q
    |||||||||||||||||  ||||||| |||||||||  | |||||||||||||||||||    
T  41779664 gatgagaatgttgcattaaatgtgtgttaagactaggcgggataggattagaaatgaca 41779606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 267
Target Start/End: Original strand, 6218971 - 6219080
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    |||||| || |||||||||||| ||||| |||||| ||||||||||||   |||||||||| |||  | |||||| ||||| || |||||   |||||||    
T  6218971 tagcacttatagtagaaaagatagtggataataggcttaggtggtttggacatgtagagaggagatatgtagattatgtagtaaggagaggtgatcaaat 6219070  T
Q  258 tgaggatagt 267  Q
     |||||||||    
T  6219071 ggaggatagt 6219080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 25834685 - 25834750
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  25834685 tagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagac 25834750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 44411640 - 44411709
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 142  Q
    ||||| ||| |||| || ||||||| |||||||||||||||||| ||||| ||||||||| |||||||||    
T  44411640 gatgataatattgcgtttgatgtgttgtaagactagatgagatatgattacaaatgacaacattagagag 44411709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 11017318 - 11017398
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtag 238  Q
    ||||||||| |||||||||||| ||||||| | || ||| ||||||||  ||||| ||||||||||   ||||||||||||    
T  11017318 tagcacctatagtagaaaagatcgtggaaactcggcttaagtggtttgggtatgtggagagaagacccgtagattttgtag 11017398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 37481930 - 37481815
Alignment:
Q  119 gattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagaga 217  Q
    ||||||||||||||| |||||||||| | |||||||||       |||| |||| |||||||||| |||  |||| |||||||||||||  |||||||||    
T  37481930 gattagaaatgacaacattagagagagagttggggtagtt-----cctatagtaaaaaagatggttgaacctaggcttaggtggtttgagcatgtagaga 37481836  T
Q  218 gaagacttatagattttgtag 238  Q
    |||||||| |  |||||||||    
T  37481835 gaagacttgtgaattttgtag 37481815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 254
Target Start/End: Complemental strand, 42149900 - 42149828
Alignment:
Q  182 tggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatca 254  Q
    |||||| |||| ||||||||||||| |||||||||||||  | |||||||| ||||| || ||||||| ||||    
T  42149900 tggaaactaggcttaggtggtttgagtatgtagagagaaatcctatagattctgtagtaaggagagtagatca 42149828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 11412725 - 11412772
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttg 205  Q
    ||||||||| ||||||||| ||||||||||||||| |||||| |||||    
T  11412725 tagcacctatagtagaaaatatggtggaaaataggcttaggttgtttg 11412772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 12734641 - 12734768
Alignment:
Q  90 tggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaa 188  Q
    |||||| |||||||||||||| | |||||||||||||||||||  |||||||||   | |||||     ||||||||| |||||||||  |||| |||||    
T  12734641 tggatgagtggtaagactagacgggataggattagaaatgacaccattagagag---agtgggg----gtagcacctatagtagaaaaattggtagaaaa 12734733  T
Q  189 taggtttaggtggtttgattatgtagagagaagac 223  Q
    |||| |||| |||||||   ||||| |||||||||    
T  12734734 taggcttagatggtttggacatgtaaagagaagac 12734768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 45077810 - 45077869
Alignment:
Q  209 atgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtc 268  Q
    |||||||||||| |||| |||||||||||| || ||||||| |||| || ||||||||||    
T  45077810 atgtagagagaaaacttgtagattttgtagtaaggagagtagatcagatggaggatagtc 45077869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 12882317 - 12882271
Alignment:
Q  159 agcacctaaagtagaaaagatggtggaaaataggtttaggtggtttg 205  Q
    |||||||| | ||||||||||||| ||||||||| ||||||||||||    
T  12882317 agcacctatactagaaaagatggtagaaaataggcttaggtggtttg 12882271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 222
Target Start/End: Complemental strand, 41197599 - 41197442
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcata 159  Q
    |||||||||||| |||||| |||||||  | |||| ||||||||||||||   ||||||||||| |||||||  |||||||| | | |  ||||||||      
T  41197599 taagtgtagcggagatgaggatgttgcgctagatgagtggtaagactagacatgataggattaggaatgacaccattagagatagagtgagggtagca-- 41197502  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaaga 222  Q
       |||| | |||||||| |||| ||||||||| |||| |||||||   ||||||||||||||    
T  41197501 ---cctataatagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaaga 41197442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 41779090 - 41779032
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 132  Q
    |||||||||||||| ||||||||| |||||||||||  | ||||||  |||||||||||    
T  41779090 gatgagaatgttgcgttggatgtggggtaagactagtcgggatagggctagaaatgaca 41779032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 41779575 - 41779521
Alignment:
Q  169 gtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    |||||||| |||||||||| | |  |||||||||||||| |||||||||||||||    
T  41779575 gtagaaaaaatggtggaaactcgacttaggtggtttgatcatgtagagagaagac 41779521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 2610592 - 2610657
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| ||| |||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  2610592 tagcacctatagtggaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 2610657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 3243931 - 3243866
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| |||| ||||| || ||||||||||| |||| |||||||   |||||||||||||||    
T  3243931 tagcacctatagtaaaaaagttgatggaaaataggcttagatggtttgggaatgtagagagaagac 3243866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 38452963 - 38452898
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||| ||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  38452963 tagcatctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 38452898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 38860178 - 38860223
Alignment:
Q  159 agcacctaaagtagaaaagatggtggaaaataggtttaggtggttt 204  Q
    |||||| | |||||||||||| |||||||||||| |||||||||||    
T  38860178 agcacccatagtagaaaagattgtggaaaataggcttaggtggttt 38860223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 9579052 - 9579000
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    ||||||| ||||||||||||||||| |||||  ||||| |||| |||||||||    
T  9579052 atgttgcgttggatgtgtggtaagaatagatatgatagaattaaaaatgacaa 9579000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 17581407 - 17581451
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    |||||||||||||||||||||||  |||| ||||| |||||||||    
T  17581407 ttggatgtgtggtaagactagatatgataagattaaaaatgacaa 17581451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 41858745 - 41858845
Alignment:
Q  168 agtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagt 267  Q
    |||||||||||||||||||| | || |||| |||||||   ||||||||||||||| | ||| || | ||| ||||| |||| |||  || |||||||||    
T  41858745 agtagaaaagatggtggaaactgggcttagatggtttggacatgtagagagaagacatgtaggttctctagtaaagaaagtagatcggatagaggatagt 41858844  T
Q  268 c 268  Q
    |    
T  41858845 c 41858845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 254
Target Start/End: Original strand, 44411716 - 44411812
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatca 254  Q
    ||||||||| ||||| ||||||||||||||||||| ||  |||||||    ||||  ||||||||||| ||| | ||| || |||||||||| ||||    
T  44411716 tagcacctatagtaggaaagatggtggaaaataggcttccgtggttttgacatgtttagagaagacttgtagctgttgcagtaaagagagtagatca 44411812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 5e-31; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 74 - 257
Target Start/End: Original strand, 54470131 - 54470310
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| |||||||||||||||||||||||||||||||| |||| |||| ||||| |||| |||||||||| | ||||||     ||||||||| |||||    
T  54470131 gatgaggatgttgcattggatgtgtggtaagactagatgggatatgatttgaaataacaacattagagagagagttgggg-----tagcacctatagtag 54470225  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    ||||||||||||||| |||  ||| ||||||||   ||||||||||||||| | || ||| ||||| || ||||||| |||||||    
T  54470226 aaaagatggtggaaactagacttaagtggtttgggcatgtagagagaagacatgtaaattatgtagtaaggagagtaaatcaaat 54470310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 81 - 204
Target Start/End: Original strand, 33709850 - 33709974
Alignment:
Q  81 atgttgcattggatgtgtggtaagactaga--tga---gataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaa 174  Q
    ||||||| ||||||||||||||||||||||  |||   |||||||||||||||| ||| |||||||||| | |||||||| ||     |||| |||||||    
T  33709850 atgttgcgttggatgtgtggtaagactagacatgataggataggattagaaatggcaacattagagagagagttggggtaaca-----cctatagtagaa 33709944  T
Q  175 aagatggtggaaaataggtttaggtggttt 204  Q
    ||||||||||||| ||||||||||||||||    
T  33709945 aagatggtggaaactaggtttaggtggttt 33709974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 31960185 - 31960027
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | ||||     ||    
T  31960185 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtggggg-----ta 31960091  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  31960090 gcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 31960027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 62 - 238
Target Start/End: Original strand, 29398730 - 29398902
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcata 159  Q
    |||||||||||| |||||| ||||||| |||||| |||||||||| ||||||  || |||||| ||||||||| ||||| || | | ||| |     |||    
T  29398730 taagtgtagcggagatgaggatgttgc-ttggatttgtggtaagattagatggaattggattacaaatgacaatattagggaaagagttgcg-----ata 29398823  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtag 238  Q
    |||||||  |||||||||||||||||||||| | ||| ||||||||   ||||||||||||||| |||||||| |||||    
T  29398824 gcacctatggtagaaaagatggtggaaaatatgcttatgtggtttgggcatgtagagagaagacctatagattctgtag 29398902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 223
Target Start/End: Complemental strand, 51252799 - 51252674
Alignment:
Q  92 gatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaata 190  Q
    ||||||| ||||||||||| |||||||||||||||||||| | ||||||||||   |||||||||||     |||  |||||||||||||||||||| ||    
T  51252799 gatgtgtcgtaagactagacgagataggattagaaatgactacattagagagag--ttggggtagca-----cctctagtagaaaagatggtggaaacta 51252707  T
Q  191 ggtttaggtggtttgattatgtagagagaagac 223  Q
    || ||||||||| ||   |||||||||||||||    
T  51252706 ggcttaggtggtatgggcatgtagagagaagac 51252674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 2588904 - 2588964
Alignment:
Q  73 ggatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    ||||||| ||||||| |||||||||||||||||||||| | ||||||||||||||||||||    
T  2588904 ggatgaggatgttgcgttggatgtgtggtaagactagaagggataggattagaaatgacaa 2588964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 47611741 - 47611841
Alignment:
Q  168 agtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagt 267  Q
    ||||||||||||| ||||||||||| ||||||||||||   ||||||||||||||| || ||||||||||  || ||||||| |||| || ||||| |||    
T  47611741 agtagaaaagatgatggaaaataggcttaggtggtttgggcatgtagagagaagacctagagattttgtaataaggagagtaaatcagatggaggagagt 47611840  T
Q  268 c 268  Q
    |    
T  47611841 c 47611841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 265
Target Start/End: Original strand, 28497494 - 28497600
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    ||||||||  |||||||||||| |||||||| ||| ||||||||||||   ||||||||||||||||| |||||| ||||| || ||||||| |||| ||    
T  28497494 tagcacctttagtagaaaagattgtggaaaa-aggcttaggtggtttgggcatgtagagagaagacttgtagattatgtagtaaggagagtagatcagat 28497592  T
Q  258 tgaggata 265  Q
     |||||||    
T  28497593 ggaggata 28497600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 143
Target Start/End: Complemental strand, 45185388 - 45185305
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 143  Q
    |||||||||||| ||| ||||| |||  |||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||    
T  45185388 taagtgtagcggtgataagaatattgtgttggatgtgtagtaagactagatgagatagaattagaaatgacaacattagagaga 45185305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 17668467 - 17668410
Alignment:
Q  76 tgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    |||||||||||| ||||||||||||||| ||||||||||||| ||||| |||||||||    
T  17668467 tgagaatgttgcgttggatgtgtggtaaaactagatgagataagattataaatgacaa 17668410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 28236187 - 28236260
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagat 231  Q
    ||||||||| |||||||||| |||||||||||||| |||| |||||||   ||||||||||||||||| |||||    
T  28236187 tagcacctatagtagaaaagttggtggaaaataggcttagatggtttgggcatgtagagagaagacttgtagat 28236260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 34233458 - 34233323
Alignment:
Q  6 cgatgttgtatggaacagagagttgggcagtgaagaaccaatatgagnnnnnnnnntaagtgtagcgg-gatgagaatgttgcattggatgtgtggtaag 104  Q
    ||||| ||||||||||||||||||||||||||||||||||| | | |         ||||||||| || |||||  ||||||  ||||||||||| ||||    
T  34233458 cgatgctgtatggaacagagagttgggcagtgaagaaccaacacggg--aataagataagtgtagtggagatgatgatgttgtgttggatgtgtgataag 34233361  T
Q  105 actagatgagataggattagaaatgacaa-attagaga 141  Q
    |||||||| |||||||||||||| ||||| ||||||||    
T  34233360 actagatgtgataggattagaaacgacaacattagaga 34233323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 30621482 - 30621406
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagatttt 234  Q
    |||||| || ||||||||||||||||||||||||||||||||| ||||   | |||||||||||| || ||||||||    
T  30621482 tagcacttatagtagaaaagatggtggaaaataggtttaggtgatttgggcacgtagagagaagatttgtagatttt 30621406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 42639296 - 42639224
Alignment:
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagatt 232  Q
    ||||||| ||||||||||||||||||||  ||| ||||||||||||   ||||||||||||||||||| ||||    
T  42639296 gcacctatagtagaaaagatggtggaaaccaggcttaggtggtttggacatgtagagagaagacttatggatt 42639224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 232
Target Start/End: Original strand, 50662330 - 50662466
Alignment:
Q  91 ggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaat 189  Q
    |||||||||||||||||| ||||||||||||| |||||||||  ||||||||||   |||||  |      |||||| |||||||||||||||||||| |    
T  50662330 ggatgtgtggtaagactatatgagataggattggaaatgacagcattagagagagt-ttgggcaa------cacctatagtagaaaagatggtggaaagt 50662422  T
Q  190 aggtttaggtgg-tttgattatgtagagagaagacttatagatt 232  Q
    ||| |||||||| ||||   ||||||||||||||||| ||||||    
T  50662423 aggcttaggtggttttgggcatgtagagagaagacttgtagatt 50662466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 10208976 - 10209031
Alignment:
Q  88 attggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 142  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||    
T  10208976 attggatgtgtggtaagactagatgggatagaattagaaatgacaacattagagag 10209031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 56225074 - 56225133
Alignment:
Q  162 acctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaag 221  Q
    ||||| |||| |||||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  56225074 acctatagtataaaagatggtagaaaataggcttaggtggtttgagtatgtagagagaag 56225133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 269
Target Start/End: Complemental strand, 45185296 - 45185194
Alignment:
Q  167 aagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatag 266  Q
    ||||||||||||||||||| |||||| ||||||| ||||   || |||||| ||||||| |||||||||||| ||  ||||||||| | || || |||||    
T  45185296 aagtagaaaagatggtggataataggcttaggtgatttgggcatatagagacaagacttgtagattttgtagtaagaagagtatatgagatggaagatag 45185197  T
Q  267 tct 269  Q
    |||    
T  45185196 tct 45185194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 223
Target Start/End: Original strand, 56375214 - 56375359
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| ||||||| ||||||| ||||||||||||||  ||||| |||||| |||||||  |||||||||| | | ||||     ||||||||| | |||    
T  56375214 gatgaggatgttgcgttggatgagtggtaagactagacaagataagattaggaatgacaccattagagagagagtagggg-----tagcacctataatag 56375308  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||| |||| ||||| ||| |||| |||||||   |||||||||||||||    
T  56375309 aaaagttggtagaaaacaggcttagatggtttgggcatgtagagagaagac 56375359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 197
Target Start/End: Original strand, 12494661 - 12494793
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | ||||     ||    
T  12494661 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtggggg-----ta 12494755  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttag 197  Q
    ||||||| |||||||||| |||| ||||||||| ||||    
T  12494756 gcacctatagtagaaaagttggtagaaaataggcttag 12494793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 17666402 - 17666341
Alignment:
Q  72 gggatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||| ||||| | |||||||    
T  17666402 gggatgtgaatgttgcatttgatgtgtggtaaaactagatgagataagattatatatgacaa 17666341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 141
Target Start/End: Complemental strand, 20105822 - 20105761
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagaga 141  Q
    |||||||  ||||||||||||||||||||| |||||| ||||||||||||||| ||||||||    
T  20105822 atgttgcgatggatgtgtggtaagactagacgagatatgattagaaatgacaacattagaga 20105761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 17900405 - 17900461
Alignment:
Q  75 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgac 131  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||  ||||||||||||    
T  17900405 atgaggatgttgcgttggatgtgtggtaagactagatgggataaaattagaaatgac 17900461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 23906672 - 23906508
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagca-t 158  Q
    |||||||||| | |||||| ||||||| ||||||| |||| |||||||||  |||||||||||| |||||||  |||||||||| |    | || |   |    
T  23906672 taagtgtagcagagatgaggatgttgcgttggatgagtggcaagactagacaagataggattaggaatgacaccattagagagagagagagagtgggggt 23906573  T
Q  159 agcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    |||||||| |||||||||| | || ||||||||| |||| ||||||||  |||||||||||||||    
T  23906572 agcacctatagtagaaaagtttgtagaaaataggcttagatggtttgagcatgtagagagaagac 23906508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 31459034 - 31459098
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaaga 222  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||||   ||||| ||||||||    
T  31459034 tagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtaaagagaaga 31459098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 38903986 - 38903918
Alignment:
Q  170 tagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtag 238  Q
    |||||||||||||||||| | || |||| ||||||||  |||| |||||||||||| ||||||||||||    
T  38903986 tagaaaagatggtggaaactcggcttagttggtttgagcatgtggagagaagacttgtagattttgtag 38903918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 41192840 - 41192920
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtag 238  Q
    ||||||||| |||||||||||||||||||| |||  ||||||| ||||   ||||||||||||||| | |||||| |||||    
T  41192840 tagcacctacagtagaaaagatggtggaaactagacttaggtgatttgtgcatgtagagagaagacctgtagattctgtag 41192920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 43433829 - 43433993
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagca-t 158  Q
    |||||||||| | |||||| ||||||| ||||||| |||| |||||||||  |||||||||||| |||||||  |||||||||| |    | || |   |    
T  43433829 taagtgtagcagagatgaggatgttgcgttggatgagtggcaagactagacaagataggattaggaatgacaccattagagagagagagagagtgggggt 43433928  T
Q  159 agcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    |||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  43433929 agcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 43433993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 254
Target Start/End: Original strand, 43562691 - 43562787
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatca 254  Q
    ||||||||||||||||||| || ||| ||| |||| |||||||||||||  | |||||||||| |  ||| |||||||||| ||| |||| ||||||    
T  43562691 tagcacctaaagtagaaaatattgtgaaaactagggttaggtggtttgaccaagtagagagaaaatctatggattttgtagtaaaaagagcatatca 43562787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 48622912 - 48622756
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||   | |||||     ||    
T  48622912 taagtgtagcagagatgaggatgttgctttggatgagtggtaagactagacatgataggattaggaatgacaccattagagag---agtgggg----gta 48622820  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||| | |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  48622819 gcacccatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 48622756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 49987435 - 49987479
Alignment:
Q  161 cacctaaagtagaaaagatggtggaaaataggtttaggtggtttg 205  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||    
T  49987435 cacctatagtagaaaagatggtggaaaataggcttaggtggtttg 49987479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 223
Target Start/End: Original strand, 50471453 - 50471595
Alignment:
Q  75 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaa-agtag 172  Q
    ||||||||||||  |||||||| || ||||||| || |  ||||||||||| ||||||| ||||||||||   | |||||||||      |||| |||||    
T  50471453 atgagaatgttgtgttggatgtttgctaagacttgacgtaataggattagagatgacaacattagagagac--tcggggtagca------ctaatagtag 50471544  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||||||||| |||||||| ||||||||   |||||||||||||||    
T  50471545 aaaagatggtggaaactaggtttaagtggtttgggcatgtagagagaagac 50471595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 436140 - 436298
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||| ||||||| || |||||||||||   ||||||||||  |||||||  |||||||||| | | ||||     ||    
T  436140 taagtgtagcagagatgaggatgttgcgttggatgagtcgtaagactagacatgataggattaagaatgacaccattagagagagagtggggg-----ta 436234  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| ||||||||| |||| || ||||   |||||||||||||||    
T  436235 gcacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagac 436298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 231
Target Start/End: Complemental strand, 1777373 - 1777222
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  ||||||||||     | || |  |||||||||| ||||     
T  1777373 gatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagaga-----gtggaa--atagcacctatagtaa 1777281  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagat 231  Q
    ||||| |||| ||||||||| |||| |||||||   || ||||||||||||| ||||||    
T  1777280 aaaagttggtagaaaataggcttagatggtttggacatctagagagaagactcatagat 1777222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 281
Target Start/End: Complemental strand, 13805507 - 13805420
Alignment:
Q  194 ttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtctggtcactagagg 281  Q
    ||||||||||||  |||||||||||||||| | |||||||||||| || |||| || |||| || |||||| ||| | ||||||||||    
T  13805507 ttaggtggtttgggtatgtagagagaagacctttagattttgtagcaaggagactagatcacatggaggattgtcagatcactagagg 13805420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 33191219 - 33191061
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| |||||||  |||||| ||||||||| |||||  ||||||||||| |||||||  |||||||||| | | ||||     ||    
T  33191219 taagtgtagcagagatgaggatgttgcgctggatgagtggtaagattagataggataggattaggaatgacaccattagagagagagtggggg-----ta 33191125  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| ||||||||  |||| | |||||   |||||||||||||||    
T  33191124 gcacctatagtagaaaagttggtagaaaatagacttagattgtttgggcatgtagagagaagac 33191061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 33227120 - 33227278
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| |||||||  |||||| ||||||||||||||   ||||||||||  |||||||  |||||||||| | | ||||     ||    
T  33227120 taagtgtagcagagatgaggatgttgcgctggatgagtggtaagactagacatgataggattaagaatgacaccattagagagagagtggggg-----ta 33227214  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| ||||||||| |||| | |||||   |||||||||||||||    
T  33227215 gcacctatagtagaaaagttggtagaaaataggcttagattgtttgggcatgtagagagaagac 33227278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 35690215 - 35690286
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 132  Q
    |||||||||| | |||||| ||||||| ||||||| || ||||||||||| ||||||||||||| |||||||    
T  35690215 taagtgtagccgagatgaggatgttgcgttggatgagtagtaagactagacgagataggattaggaatgaca 35690286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 254
Target Start/End: Complemental strand, 46715649 - 46715554
Alignment:
Q  159 agcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatca 254  Q
    ||||||||  ||||||||||||||||||| |||| ||||||||| ||   ||||||||||||||| | | |||| ||||| || ||||||| ||||    
T  46715649 agcacctattgtagaaaagatggtggaaactaggcttaggtggtgtgggcatgtagagagaagacatgtggattatgtagcaaggagagtagatca 46715554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 223
Target Start/End: Complemental strand, 52569858 - 52569728
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaa 187  Q
    ||||||| | ||||||||||||   ||||||||||| |||||||  |||||||||| | | ||||     ||||||||| |||||||||| |||| ||||    
T  52569858 ttggatgaggggtaagactagacaggataggattaggaatgacaccattagagagagagtggggg-----tagcacctatagtagaaaagttggtagaaa 52569764  T
Q  188 ataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||| |||| |||||||   |||||||||||||||    
T  52569763 ataggcttagatggtttgggcatgtagagagaagac 52569728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 37797783 - 37797920
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagat 179  Q
    ||||||| ||||||| ||| ||||||||||   |||| ||||||||||||||  |||||||||| | | | |||||||     |||| |||||||||| |    
T  37797783 atgttgcgttggatgagtgataagactagacatgataagattagaaatgacaccattagagagagagtggaggtagca-----cctatagtagaaaagtt 37797877  T
Q  180 ggtggaaaataggtttaggtggtttgattatgtagagagaaga 222  Q
    ||| ||||||||| |||| |||||||   ||||||||||||||    
T  37797878 ggtagaaaataggcttagatggtttggacatgtagagagaaga 37797920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 53707798 - 53707908
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    ||||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||   |||||   || | ||  ||||||||||||||    
T  53707798 tagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtatatcaaat 53707897  T
Q  258 tgaggatagtc 268  Q
     ||||||||||    
T  53707898 ggaggatagtc 53707908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 55768779 - 55768733
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggttt 204  Q
    ||||||||| ||||||||||||  |||||||||||||||||||||||    
T  55768779 tagcacctatagtagaaaagatcatggaaaataggtttaggtggttt 55768733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 55833035 - 55832989
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggttt 204  Q
    ||||||||| ||||||||||||  |||||||||||||||||||||||    
T  55833035 tagcacctatagtagaaaagatcatggaaaataggtttaggtggttt 55832989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 26037783 - 26037718
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| |||||||||| |||| ||||||||| |||| |||||||||  | ||||||||||||    
T  26037783 tagcacctatagtagaaaagttggtagaaaataggcttagatggtttgatattatagagagaagac 26037718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 205
Target Start/End: Complemental strand, 44047699 - 44047579
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagat 179  Q
    ||||||||||| ||| |||||| || |||  | ||||| |||||||||||||| |||||||||| | |||||||||||     |||| |||||||||| |    
T  44047699 atgttgcattgaatgcgtggtaggattaggcgggatagaattagaaatgacaacattagagagagagttggggtagca-----cctatagtagaaaaggt 44047605  T
Q  180 ggtggaaaataggtttaggtggtttg 205  Q
    ||| |||  |||| ||||||||||||    
T  44047604 ggtagaatctaggcttaggtggtttg 44047579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 267
Target Start/End: Original strand, 50680746 - 50680853
Alignment:
Q  161 cacctaaagtagaaaagatggtggaaaataggtttaggtggtttgat--tatgtagagagaagacttatagattttgtaggaaagagagtatatcaaatt 258  Q
    |||||| ||| ||||||||||||||||||||| ||||||||||| ||   ||||||||||||| ||| ||||||  |||| || ||||||| ||| |||     
T  50680746 cacctatagttgaaaagatggtggaaaataggcttaggtggttt-atggcatgtagagagaaggcttgtagattccgtagtaaggagagtagatccaatg 50680844  T
Q  259 gaggatagt 267  Q
     ||||||||    
T  50680845 aaggatagt 50680853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 257
Target Start/End: Original strand, 31339552 - 31339639
Alignment:
Q  169 gtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    |||||||| ||||| |||| || | |||||||||||||  ||||||||||||||||| |||||| ||||| || || |||| |||||||    
T  31339552 gtagaaaa-atggtcgaaactaagcttaggtggtttgagcatgtagagagaagacttgtagattatgtagtaaggatagtagatcaaat 31339639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 45205278 - 45205148
Alignment:
Q  1 accgacgatgttgtatggaacagagagttgggcagtgaagaaccaatatgagnnnnnnnnntaagtgtagcgg-gatgagaatgttgcattggatgtgtg 99  Q
    |||| ||||||||||||| || ||| |||||||||| ||||||||| | |||         |||| ||||||| |||||| ||||||  ||||||| |||    
T  45205278 accggcgatgttgtatggtacggagtgttgggcagttaagaaccaacacgagaatcaag--taagcgtagcggagatgaggatgttgtgttggatgagtg 45205181  T
Q  100 gtaagactagatgagataggattagaaatgaca 132  Q
    ||||||||||| | ||||||||||| |||||||    
T  45205180 gtaagactagacgggataggattaggaatgaca 45205148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 21106908 - 21106967
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    |||||| ||||||  || ||||||||||||||||||| | ||||| ||||||||||||||    
T  21106908 gatgaggatgttgggttcgatgtgtggtaagactagacgtgatagaattagaaatgacaa 21106967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 35555925 - 35555802
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    ||||||||| ||||||||||||||| |||| |||  ||||||||||||   || |||||||||||| | | |||| |||||  | ||||||| || | ||    
T  35555925 tagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatttagagagaagacctgtggattctgtagttaggagagtagattagat 35555826  T
Q  258 tgaggatagtctggtcactagagg 281  Q
     ||||| |||  ||||||||||||    
T  35555825 agaggagagttgggtcactagagg 35555802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 45423543 - 45423602
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    |||||| ||||||  |||| ||||||||||||||||| | ||||| ||||||||||||||    
T  45423543 gatgaggatgttgtgttggttgtgtggtaagactagacgggatagaattagaaatgacaa 45423602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 281
Target Start/End: Original strand, 54934940 - 54935027
Alignment:
Q  194 ttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtctggtcactagagg 281  Q
    |||| |||||||| |||||||||||||||||| |||||| |||||  | ||||||| ||||||  || ||||||  | ||||||||||    
T  54934940 ttagatggtttgaatatgtagagagaagacttttagattctgtagtgaggagagtagatcaaaaggatgatagttagatcactagagg 54935027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 1427552 - 1427466
Alignment:
Q  168 agtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatca 254  Q
    ||||||||| |||||||||| |||| |||| ||||||||  ||||||||||| ||| | | |||||||| | || ||||||| ||||    
T  1427552 agtagaaaacatggtggaaactaggcttagatggtttgagcatgtagagagaggacctgtggattttgtggtaaggagagtagatca 1427466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 7092499 - 7092433
Alignment:
Q  157 atagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    |||||||||| ||||||||| ||| | ||||||||||||| ||||||||   || ||||||||||||    
T  7092499 atagcacctatagtagaaaatatgatagaaaataggtttaagtggtttgggcatatagagagaagac 7092433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 11389644 - 11389705
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactaga--tgagataggattagaaatgacaa 133  Q
    |||||| |||||| |||||||||||||||| ||||||   || |||||||||||||||||||    
T  11389644 gatgaggatgttggattggatgtgtggtaaaactagacgggatataggattagaaatgacaa 11389705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 20998954 - 20998992
Alignment:
Q  92 gatgtgtggtaagactagatgagataggattagaaatga 130  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  20998954 gatgtgttgtaagactagacgagataggattagaaatga 20998992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 42293527 - 42293453
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagatt 232  Q
    ||||||||| ||||||||||||| |||||| | || ||||||||||||  |||||||| ||| ||| | ||||||    
T  42293527 tagcacctatagtagaaaagatgatggaaactcggcttaggtggtttgggtatgtagaaagacgacatgtagatt 42293453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 43070107 - 43070053
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 142  Q
    ||||||||||||||||| ||||   |||||||||||||||||||| |||||||||    
T  43070107 ttggatgtgtggtaagattagacaggataggattagaaatgacaacattagagag 43070053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 44667600 - 44667530
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 143  Q
    |||||||||||||| |||||| || ||||| ||||||  |||||| ||||||| |||||| ||||||||||    
T  44667600 gatgagaatgttgcgttggatatgcggtaatactagacaagatagtattagaagtgacaatattagagaga 44667530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 44860779 - 44860833
Alignment:
Q  75 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatg 129  Q
    ||||| ||||||  ||||||||||||||||||||||||  ||| |||||||||||    
T  44860779 atgaggatgttgtgttggatgtgtggtaagactagatggaataagattagaaatg 44860833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 20591578 - 20591505
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagat 231  Q
    |||||| || |||||||||| |||| ||||||| | |||| |||||||   |||||||||||||||| ||||||    
T  20591578 tagcacttatagtagaaaagttggtagaaaataagattagatggtttgggcatgtagagagaagactcatagat 20591505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 51841534 - 51841465
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagca 157  Q
    ||||||||||||||||||||||  |||||| ||  |||| ||||| |||||||||| |||||||| ||||    
T  51841534 ttggatgtgtggtaagactagacaagatagaatatgaaacgacaatattagagagagaattggggcagca 51841465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 4440858 - 4440922
Alignment:
Q  159 agcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    |||||||| |||||||||| |||| ||||||||| |||| |||||||   || ||||||||||||    
T  4440858 agcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatctagagagaagac 4440922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 18966484 - 18966536
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    ||||||| ||||||||||||||||| ||||  | ||||||||| |||||||||    
T  18966484 atgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaa 18966536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 25967623 - 25967555
Alignment:
Q  76 tgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgac-aaattagagaga 143  Q
    |||| |||||||  |||||||||||||||||||||   | |||||||||||||||| | ||||||||||    
T  25967623 tgaggatgttgcgatggatgtgtggtaagactagacatggtaggattagaaatgactacattagagaga 25967555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 26356626 - 26356670
Alignment:
Q  161 cacctaaagtagaaaagatggtggaaaataggtttaggtggtttg 205  Q
    |||||| ||||||||||||||| ||||||||  ||||||||||||    
T  26356626 cacctatagtagaaaagatggtagaaaatagacttaggtggtttg 26356670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 38571024 - 38570960
Alignment:
Q  159 agcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    |||||||| |||| ||||||| ||||||| |||| ||||||||||||   ||||||| |||||||    
T  38571024 agcacctatagtacaaaagatagtggaaactaggcttaggtggtttgggcatgtagaaagaagac 38570960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 39100813 - 39100749
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaaga 222  Q
    ||||||||| || ||||||| || | ||||||||| |||| ||||||||  ||||||||||||||    
T  39100813 tagcacctatagaagaaaagttgatagaaaataggcttagatggtttgaacatgtagagagaaga 39100749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 42618817 - 42618857
Alignment:
Q  93 atgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    |||||||| |||||||||  |||||||||||||||||||||    
T  42618817 atgtgtgggaagactagacaagataggattagaaatgacaa 42618857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 44360022 - 44360066
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    |||||||||||||| ||||||  ||||||| ||||||||||||||    
T  44360022 ttggatgtgtggtaggactaggcgagatagaattagaaatgacaa 44360066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 254
Target Start/End: Complemental strand, 49738882 - 49738786
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatca 254  Q
    |||||||||  |||||||||||||| |||| | || ||||||| |||||   |||| |||||||||  ||||||||||||  || ||||||| ||||    
T  49738882 tagcacctattgtagaaaagatggtagaaactcggcttaggtgatttgagcgtgtaaagagaagacccatagattttgtactaaggagagtaaatca 49738786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 268
Target Start/End: Complemental strand, 48431684 - 48431574
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||| |||||||||||| |||||||||  |||| ||    
T  48431684 tagcccctatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagagaagacttgtagattttgtagtaaagagagttgatcagat 48431585  T
Q  258 tgaggatagtc 268  Q
     ||||||||||    
T  48431584 ggaggatagtc 48431574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 95 - 281
Target Start/End: Complemental strand, 35828887 - 35828705
Alignment:
Q  95 gtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaataggt 193  Q
    ||||| ||||||||| || |||| ||||||||||||||| |||||||||| | || | ||||||     ||||  ||||||||||||||||||||||||     
T  35828887 gtgtgataagactaggtgtgataagattagaaatgacaatattagagagagagtttgagtagca-----cctatggtagaaaagatggtggaaaataggg 35828793  T
Q  194 ttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtctggtcactagagg 281  Q
    ||||||||||||    |||||||||||||| |||||||| ||||| || ||||| | |||| || |||||||||| | || |||||||    
T  35828792 ttaggtggtttggacgtgtagagagaagacctatagattatgtagtaaggagagaagatcatatggaggatagtcagatccctagagg 35828705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 81 - 238
Target Start/End: Original strand, 43423648 - 43423803
Alignment:
Q  81 atgttgcattggatgtgtggt--aagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaag 177  Q
    ||||||| ||||||||||||   |||||||||   |||||||||||||||||| | |||||||||| | |||||||| ||     |||| ||||||||||    
T  43423648 atgttgcgttggatgtgtgggggaagactagacaggataggattagaaatgaccacattagagagagagttggggtaaca-----cctatagtagaaaag 43423742  T
Q  178 atggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtag 238  Q
    |||||||||| |||| ||||||||||||   ||||||||||||||||| |||||| |||||    
T  43423743 atggtggaaactaggcttaggtggtttggccatgtagagagaagacttgtagattatgtag 43423803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 2544603 - 2544713
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    ||||||||| ||||||||||||||||||||| ||  ||||||||||||   ||||||||||||||| |||||||| | ||| || ||||||| |||| ||    
T  2544603 tagcacctatagtagaaaagatggtggaaaacagacttaggtggtttggacatgtagagagaagacctatagattctatagtaaggagagtagatcagat 2544702  T
Q  258 tgaggatagtc 268  Q
     ||||||||||    
T  2544703 ggaggatagtc 2544713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 36340081 - 36340001
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtag 238  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||    ||| ||||||||||| ||||||||||||||    
T  36340081 tagcacctatattagaaaagatggtggaaaataggtttaggtggtttagacatggagagagaagacctatagattttgtag 36340001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 1210656 - 1210814
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | ||||     ||    
T  1210656 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtggggg-----ta 1210750  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  1210751 gcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 1210814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 232
Target Start/End: Original strand, 1661377 - 1661508
Alignment:
Q  101 taagactagatgagataggattagaaatga----caa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaataggttt 195  Q
    |||||||||||| |||||||||||||||||    ||| ||| |||||| | |||||||||||     |||| ||||||||||||||||||||||||| |     
T  1661377 taagactagatgtgataggattagaaatgaatgacaatatttgagagagagttggggtagca-----cctatagtagaaaagatggtggaaaataggctc 1661471  T
Q  196 aggtggtttgattatgtagagagaagacttatagatt 232  Q
    || ||||||||  ||||||||||||||| ||||||||    
T  1661472 agatggtttgagcatgtagagagaagacctatagatt 1661508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 15085845 - 15086003
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||||| |||||| |||||||  |||| | |||||||||||||||  ||||||||||| |||||||  |||||||||| | | ||||     ||    
T  15085845 taagtgtagcggagatgaggatgttgcgctggacgagtggtaagactagataggataggattaggaatgacaccattagagagagagtggggg-----ta 15085939  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  15085940 gcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagac 15086003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 30202501 - 30202343
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | ||||     ||    
T  30202501 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtggggg-----ta 30202407  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||| | |||| ||||||||| |||| ||||||| | |||||||||||||||    
T  30202406 gcacctatagtagaaaggttggtagaaaataggcttagatggtttggtcatgtagagagaagac 30202343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 13827994 - 13827930
Alignment:
Q  159 agcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||||  |||||||||||||||    
T  13827994 agcacctatagtagaaaagatggtggaaactagggttaggtggtttgaacatgtagagagaagac 13827930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 32404801 - 32404713
Alignment:
Q  161 cacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagta 249  Q
    |||||| |||| |||||||||||||||||||| ||||||||||||  |||||||||||||||| | |||||| | ||| || |||||||    
T  32404801 cacctatagtaaaaaagatggtggaaaataggcttaggtggtttggatatgtagagagaagacctgtagattctatagtaaggagagta 32404713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 696180 - 696338
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||||| |||||| |||||||  |||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | ||||     ||    
T  696180 taagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtggggg-----ta 696274  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| ||||||||| |||| ||| |||   |||||||||||||||    
T  696275 gcacctatagtagaaaagttggtagaaaataggcttagatggcttggacatgtagagagaagac 696338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 40920888 - 40920825
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 143  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||| |||| ||||||||||    
T  40920888 atgttgcattggatgtgtggtaagattagacgagataggattagaaattacaatattagagaga 40920825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 223
Target Start/End: Original strand, 9509242 - 9509387
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| ||||||  ||||||| ||| ||||||||||   |||| ||||||||||||||  |||||||||| | |||||||||||     |||| |||||    
T  9509242 gatgaggatgttgtgttggatgagtgataagactagacaggatatgattagaaatgacaccattagagagagagttggggtagca-----cctatagtag 9509336  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||||  |||||||| |||||| |||||   |||||||||||||||    
T  9509337 aaaagatggtaaaaaataggcttaggtagtttgggcatgtagagagaagac 9509387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 40416375 - 40416485
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    ||||||||| ||||||||||||||||||||  ||| |||||||||||    ||||||||||||||  | |||||||||||| || ||||||| |||| ||    
T  40416375 tagcacctatagtagaaaagatggtggaaacgaggcttaggtggtttaggcatgtagagagaagaactgtagattttgtagtaaggagagtagatcagat 40416474  T
Q  258 tgaggatagtc 268  Q
      |||||||||    
T  40416475 gcaggatagtc 40416485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 223
Target Start/End: Complemental strand, 49347751 - 49347606
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  ||| |||||| | | ||||||||||     ||| |||||    
T  49347751 gatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattggagagagagtaggggtagcat-----ctatagtag 49347657  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||| |||| ||||||||| |||| ||||||| | ||| |||||||||||    
T  49347656 aaaagttggtagaaaataggcttagatggtttggtcatgcagagagaagac 49347606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 223
Target Start/End: Complemental strand, 51441123 - 51440978
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| ||||||||||||| | ||||||||||||||   ||||||||||| |||||||  |||||||||| | | |||||| ||     |||| |||||    
T  51441123 gatgaggatgttgcattggacgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtaaca-----cctatagtag 51441029  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  51441028 aaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 51440978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 16273172 - 16273119
Alignment:
Q  80 aatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    |||||||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  16273172 aatgttgcgttggatgtgtggtaagactagatgagatgagattagaaatgacaa 16273119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 8391683 - 8391841
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||||| |||||  ||||||  ||||||| |||||||||||| |  |||||||||||| |||||||  |||||||||| | | ||||     ||    
T  8391683 taagtgtagcggagatgaagatgttgtgttggatgagtggtaagactacacaagataggattaggaatgacaccattagagagagagtggggg-----ta 8391777  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| |||||||||||||| | |||||   |||||||||| ||||    
T  8391778 gcacctatagtagaaaagttggtagaaaataggtttagattgtttggacatgtagagaggagac 8391841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 9592645 - 9592803
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | ||||     ||    
T  9592645 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtggggg-----ta 9592739  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| | || ||||||||| |||| ||| |||   |||||||||||||||    
T  9592740 gcacctatagtagaaaagtttgtagaaaataggcttagatgggttgggcatgtagagagaagac 9592803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 40419550 - 40419645
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtag 155  Q
    |||||||||| | |||||| ||| ||| ||| |||| |||||| |||||||||||||| |||||||||||||| |||||||||| | |||||||||    
T  40419550 taagtgtagcagagatgaggatggtgcgttgaatgtatggtaaaactagatgagatagaattagaaatgacaacattagagagagagttggggtag 40419645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 143
Target Start/End: Original strand, 4379929 - 4379999
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 143  Q
    |||||| ||||||  ||||||||||||||||||||||  ||||| ||||||||||||||| ||||||||||    
T  4379929 gatgaggatgttgtgttggatgtgtggtaagactagaaaagatatgattagaaatgacaacattagagaga 4379999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 281
Target Start/End: Original strand, 8796226 - 8796336
Alignment:
Q  171 agaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtctg 270  Q
    |||||| | ||||||||||||||||||||||||||   ||||||||| ||||| | ||| ||| |||| || ||||||| |||  || |||||||||| |    
T  8796226 agaaaacaaggtggaaaataggtttaggtggtttggacatgtagagataagacatgtaggtttcgtagtaaggagagtaaatcggatggaggatagtcag 8796325  T
Q  271 gtcactagagg 281  Q
     ||||||||||    
T  8796326 atcactagagg 8796336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 203
Target Start/End: Complemental strand, 9599752 - 9599627
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| ||||||  ||||||| |||||||||||||| | |||| |||||| |||||||  |||||||||| | |||| ||| ||     |||| |||||    
T  9599752 gatgaggatgttgtgttggatgagtggtaagactagacgggatatgattaggaatgacatcattagagagagagttggagtaaca-----cctatagtag 9599658  T
Q  173 aaaagatggtggaaaataggtttaggtggtt 203  Q
    |||||||||| ||||||||| ||||||||||    
T  9599657 aaaagatggtagaaaataggcttaggtggtt 9599627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 35672619 - 35672669
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgac 131  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||||||||    
T  35672619 atgttgcatttaatgtgtggtaaaactagatgagataggattagaaatgac 35672669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 16822376 - 16822319
Alignment:
Q  75 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 132  Q
    ||||| ||||||  ||||||||||||||| ||||||| ||||||||||||||||||||    
T  16822376 atgaggatgttgtgttggatgtgtggtaatactagataagataggattagaaatgaca 16822319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 9002379 - 9002463
Alignment:
Q  181 gtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggata 265  Q
    ||||||||||||||||||| |||||   ||||||||| || |||| |||||||||||| ||  |||||| ||||||| |||||||    
T  9002379 gtggaaaataggtttaggtagtttggacatgtagagaaaaaacttgtagattttgtagtaagaagagtagatcaaatagaggata 9002463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 254
Target Start/End: Complemental strand, 14226095 - 14226011
Alignment:
Q  170 tagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatca 254  Q
    ||||||||||||||||||||||| ||||||||||||   |||||||||| |  | | |||||||||||| || ||||||| ||||    
T  14226095 tagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagaggattcctgtagattttgtagtaaggagagtagatca 14226011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 41611822 - 41611874
Alignment:
Q  170 tagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaaga 222  Q
    ||||||||||||| ||||||||||||| |||||||||  ||||||||||||||    
T  41611822 tagaaaagatggtagaaaataggtttatgtggtttgagaatgtagagagaaga 41611874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 257
Target Start/End: Original strand, 52837540 - 52837628
Alignment:
Q  169 gtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    |||||| | ||||||||||||||  |||||  |||||| |||||||||||||||| |||||||| ||||  || ||||||| |||||||    
T  52837540 gtagaataaatggtggaaaatagacttagggagtttgagtatgtagagagaagacctatagattgtgtaataaggagagtagatcaaat 52837628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 5338728 - 5338851
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    ||||||||| |||||||||||||||||||| |  | ||||||||||||   ||| ||||||||||| | |||||  | ||| || ||||||| |||| ||    
T  5338728 tagcacctatagtagaaaagatggtggaaactgagcttaggtggtttgggcatgcagagagaagacctgtagatgctttagtaaggagagtagatcagat 5338827  T
Q  258 tgaggatagtctggtcactagagg 281  Q
     ||||||| || | ||||||||||    
T  5338828 ggaggatattcagatcactagagg 5338851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 8671851 - 8671986
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagat 179  Q
    ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  ||||||||||    |||||     ||||||||| |||||||||| |    
T  8671851 atgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagag---tggggg----tagcacctatagtagaaaagtt 8671943  T
Q  180 ggtggaaaataggtttaggtggtttgattatgtagagagaaga 222  Q
    ||| ||||||||| |||| |||||||   ||||||||||||||    
T  8671944 ggtagaaaataggcttagatggtttgggcatgtagagagaaga 8671986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 281
Target Start/End: Complemental strand, 13827844 - 13827725
Alignment:
Q  162 acctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgag 261  Q
    ||||| ||||||||||| |||||||| |||| | ||||||||||   ||||||||||||||  | |||||| ||||| || ||||||| |||| || ||     
T  13827844 acctatagtagaaaagacggtggaaactagggtaaggtggtttggacatgtagagagaagaagtgtagattctgtagtaaggagagtagatcatatggaa 13827745  T
Q  262 gatagtctggtcactagagg 281  Q
     |||||| | ||||||||||    
T  13827744 catagtcagatcactagagg 13827725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 249
Target Start/End: Original strand, 46388392 - 46388471
Alignment:
Q  170 tagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagta 249  Q
    |||||||||||||||||| | || |||||| |||||   ||||||||||||||||| |||||| ||||| || |||||||    
T  46388392 tagaaaagatggtggaaactcggcttaggtagtttgcacatgtagagagaagacttgtagattctgtagtaaggagagta 46388471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 990732 - 990646
Alignment:
Q  163 cctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagta 249  Q
    |||| ||||||||||||||| | ||||||| | |||||||||   |||||| ||||||||| |||||||| ||||| || |||||||    
T  990732 cctatagtagaaaagatggtaggaaataggctcaggtggtttaggtatgtaaagagaagacatatagattctgtagcaaggagagta 990646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 223
Target Start/End: Complemental strand, 4001813 - 4001668
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| |||||||  | |||| ||||||||||||||  | |||||||||| |||||||  |||||||||| | | ||||     ||||||||| |||||    
T  4001813 gatgaggatgttgcgctagatgagtggtaagactagacaaaataggattaggaatgacaccattagagagagagtggggg-----tagcacctatagtag 4001719  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||| |||| ||||||||| |||| |||||||   |||||||||| ||||    
T  4001718 aaaagttggtagaaaataggcttagatggtttggacatgtagagaggagac 4001668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 7921843 - 7921901
Alignment:
Q  162 acctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaa 220  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||   ||||||||||||    
T  7921843 acctatagtagaaaagatggtggaaactaggtttatgtggtttggacatgtagagagaa 7921901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 19936446 - 19936504
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 132  Q
    |||||||||||||  ||||||| |||||||||||||||| ||||||| ||| |||||||    
T  19936446 gatgagaatgttgtgttggatgagtggtaagactagatgggataggaataggaatgaca 19936504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 205
Target Start/End: Complemental strand, 32083113 - 32082976
Alignment:
Q  65 gtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagca 162  Q
    ||||||||| |||||| |||||||  |||||| ||||||||||||||   | ||||||||| |||||||  |||||||||| | | ||||     |||||    
T  32083113 gtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacagggtaggattaggaatgacaccattagagagagagtggggg-----tagca 32083019  T
Q  163 cctaaagtagaaaagatggtggaaaataggtttaggtggtttg 205  Q
    |||| |||||||||| |||| ||||||||| |||| |||||||    
T  32083018 cctatagtagaaaagttggtagaaaataggcttagatggtttg 32082976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 231
Target Start/End: Complemental strand, 32231312 - 32231159
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| |||||||  | |||| ||||||||| ||||   ||||||||||| |||||||  |||||||||| | | ||||     ||||||||| |||||    
T  32231312 gatgaggatgttgcgctagatgagtggtaagattagacatgataggattaggaatgacaccattagagagagagtggggg-----tagcacctatagtag 32231218  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagat 231  Q
    ||||  |||| ||||||||| |||| |||||||   ||||||||||||||||| |||||    
T  32231217 aaaaattggtagaaaataggcttagatggtttgggcatgtagagagaagacttgtagat 32231159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 223
Target Start/End: Complemental strand, 34792707 - 34792562
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| |||||||  |||||| ||||||||||||||   ||||||||||| ||||| |  |||||||||| | | ||||     ||||||||| |||||    
T  34792707 gatgaggatgttgcgctggatgagtggtaagactagacatgataggattaggaatgaaaccattagagagagagtggggg-----tagcacctatagtag 34792613  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||| |||| |||| |||| |||| |||||||   |||||||||||||||    
T  34792612 aaaagttggtagaaagtaggcttagatggtttgggcatgtagagagaagac 34792562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 223
Target Start/End: Original strand, 39140468 - 39140589
Alignment:
Q  98 tggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaataggttta 196  Q
    ||||||||||||||||||||||||||| ||||| |  |||| ||||| | |||| ||||||     |||| ||||||||||||||   ||||| || |||    
T  39140468 tggtaagactagatgagataggattaggaatgaaaccattacagagagagttggcgtagca-----cctatagtagaaaagatggcaaaaaattggctta 39140562  T
Q  197 ggtggtttgattatgtagagagaagac 223  Q
    |||||||||   |||||||||||||||    
T  39140563 ggtggtttgggcatgtagagagaagac 39140589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 51602060 - 51602125
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  51602060 tagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 51602125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 155
Target Start/End: Complemental strand, 52442861 - 52442780
Alignment:
Q  75 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtag 155  Q
    ||||| ||||||  ||||||||||||||||||||||  ||||| |||||||||||| || ||| |||||| | |||||||||    
T  52442861 atgaggatgttgtgttggatgtgtggtaagactagacaagataagattagaaatgagaacattggagagagagttggggtag 52442780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 131
Target Start/End: Original strand, 27703951 - 27703990
Alignment:
Q  92 gatgtgtggtaagactagatgagataggattagaaatgac 131  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  27703951 gatgtgtggtaagacttgatgagataagattagaaatgac 27703990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 52633530 - 52633471
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    |||||| ||||||| ||| ||||| |||||||||||||| |||| || ||||||||||||    
T  52633530 gatgaggatgttgcgttgaatgtgcggtaagactagatgtgataagactagaaatgacaa 52633471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 4590875 - 4590813
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 142  Q
    ||||||| ||| ||||| ||| ||||||||  ||||||||||||||||||||| |||||||||    
T  4590875 atgttgcgttgaatgtgcggtgagactagacaagataggattagaaatgacaatattagagag 4590813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 17815490 - 17815556
Alignment:
Q  172 gaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtag 238  Q
    |||||||||||||||| |||| |||| |||||||   ||||||||||| | |||||||||| |||||    
T  17815490 gaaaagatggtggaaactaggcttagttggtttgggcatgtagagagatggcttatagattatgtag 17815556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 39422398 - 39422340
Alignment:
Q  75 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    ||||||||||||  || ||||||||||| || || ||||||||| ||||||||||||||    
T  39422398 atgagaatgttgtgttagatgtgtggtaggattatatgagatagaattagaaatgacaa 39422340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 43375814 - 43375756
Alignment:
Q  209 atgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagt 267  Q
    ||||||||||||||| |||||||| ||||| |||||||||| |||| || | |||||||    
T  43375814 atgtagagagaagacctatagattatgtagtaaagagagtagatcagatggtggatagt 43375756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 51812539 - 51812609
Alignment:
Q  168 agtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtag 238  Q
    |||||||||||||||||||| |||| ||| ||| ||||   |||||||||||| | || ||||||||||||    
T  51812539 agtagaaaagatggtggaaactaggcttatgtgatttgggcatgtagagagaaaaattgtagattttgtag 51812609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 6641063 - 6641112
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatga 130  Q
    ||||||| |||||||||||||| |||||||||  |||| |||||||||||    
T  6641063 atgttgcgttggatgtgtggtatgactagatggcatagaattagaaatga 6641112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 17275210 - 17275291
Alignment:
Q  168 agtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagta 249  Q
    |||||||||||| ||||||| | || ||||||||||||   ||||||||||||  | | |||||||||||| || |||||||    
T  17275210 agtagaaaagattgtggaaacttggcttaggtggtttgtgcatgtagagagaatccctgtagattttgtagtaaggagagta 17275291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 34827460 - 34827403
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgac 131  Q
    |||||| ||||||  ||||||| |||||||||||||| || ||| |||||||||||||    
T  34827460 gatgaggatgttgtgttggatgagtggtaagactagacgatataagattagaaatgac 34827403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 2500115 - 2500067
Alignment:
Q  157 atagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttg 205  Q
    ||||| |||| ||||||||||||| ||||||||| ||||||||| ||||    
T  2500115 atagcccctatagtagaaaagatgatggaaaatatgtttaggtgatttg 2500067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 254
Target Start/End: Complemental strand, 3819134 - 3819038
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatca 254  Q
    |||||||||  |||||||||||||||| || |||  ||| ||||||||   ||||||| ||||||||| | |||| | ||| |||||||||| ||||    
T  3819134 tagcacctatggtagaaaagatggtggtaactagacttaagtggtttgggcatgtagaaagaagacttgtggattctctagtaaagagagtagatca 3819038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 4380017 - 4380081
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaaga 222  Q
    ||||| ||| |||||||||||||||||||| || | |||||||||||    ||||||||||||||    
T  4380017 tagcaactatagtagaaaagatggtggaaactaaggttaggtggtttatacatgtagagagaaga 4380081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 4781305 - 4781357
Alignment:
Q  78 agaatgttgcattggatgtgtggtaagactagatgagataggattagaaatga 130  Q
    |||||||| || ||||||||||| || ||||||||||| |||||||| |||||    
T  4781305 agaatgttacaatggatgtgtggaaatactagatgagacaggattaggaatga 4781357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 106
Target Start/End: Original strand, 12230955 - 12230983
Alignment:
Q  78 agaatgttgcattggatgtgtggtaagac 106  Q
    |||||||||||||||||||||||||||||    
T  12230955 agaatgttgcattggatgtgtggtaagac 12230983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 16273076 - 16272992
Alignment:
Q  181 gtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggata 265  Q
    |||||||||||||||||||||||||   || ||||||||| |||| |||||| | ||| ||  |||||  ||||||| |||||||    
T  16273076 gtggaaaataggtttaggtggtttgtacatttagagagaaaacttgtagattctatagtaagaagagtggatcaaatagaggata 16272992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 197
Target Start/End: Original strand, 16943099 - 16943218
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    ||||||||| |||  ||||||| ||| |||||||||| ||||||  |||||| || |||| ||||| |||| | ||||||||| |     |||| |||||    
T  16943099 gatgagaatattgtgttggatgcgtgataagactagacgagataaaattagacattacaatattagggagagagttggggtagta-----cctatagtag 16943193  T
Q  173 aaaagatggtggaaaataggtttag 197  Q
    ||||||||||||||| ||| |||||    
T  16943194 aaaagatggtggaaactagatttag 16943218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 17143235 - 17143179
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatga 130  Q
    |||||||||||||||||||||||| | ||||||||||   | ||| |||||||||||    
T  17143235 gatgagaatgttgcattggatgtgcgctaagactagacatggtagaattagaaatga 17143179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 26016361 - 26016397
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactaga 110  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  26016361 gatgaggatgttgcgttggatgtgtggtaagactaga 26016397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 26016454 - 26016506
Alignment:
Q  171 agaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    |||||||||||| |||| ||| |||||||||||||  |||||||| |||||||    
T  26016454 agaaaagatggtagaaactagatttaggtggtttgggtatgtagaaagaagac 26016506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 33561125 - 33561077
Alignment:
Q  96 tgtggtaagactagatgagataggattagaaatgacaa-attagagaga 143  Q
    ||||||||||||| ||| ||||||||| |||||||||| ||||||||||    
T  33561125 tgtggtaagactaaatgggataggattggaaatgacaacattagagaga 33561077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 204
Target Start/End: Complemental strand, 52561946 - 52561843
Alignment:
Q  97 gtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaataggttt 195  Q
    |||||||||||||| | |||| |||||| |||||||  |||||||||| | |||||||||||     |||  |||||||| |||| | ||||||||| ||    
T  52561946 gtggtaagactagacgggatatgattaggaatgacaccattagagagagagttggggtagca-----cctttagtagaaatgatgatagaaaataggctt 52561852  T
Q  196 aggtggttt 204  Q
    |||||||||    
T  52561851 aggtggttt 52561843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 8e-27; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 74 - 281
Target Start/End: Complemental strand, 42510369 - 42510171
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaat-gacaa-attagagagaaaattggggtagcatagcacctaaagta 171  Q
    |||||| |||||||||||||||||||||||||||||||| |||||| |||||||| || || | ||| |||    |||||     |||||||||| ||||    
T  42510369 gatgaggatgttgcattggatgtgtggtaagactagatgggataggtttagaaattgataatactagggag----ttggg-----atagcacctatagta 42510279  T
Q  172 gaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtctgg 271  Q
    |||||||| |||||||||||| ||||||||||||   ||||  ||||||||| |||||||||||| | || ||||||| |||| || |||||||||| |     
T  42510278 gaaaagatagtggaaaataggcttaggtggtttggacatgt--agagaagacctatagattttgtggtaaggagagtagatcagatggaggatagtcaga 42510181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 93 - 268
Target Start/End: Complemental strand, 39601020 - 39600849
Alignment:
Q  93 atgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaatag 191  Q
    |||||||||||||||||||| |||| ||||||||||||||| |||||||||| | ||||||||| |     |||| ||||||||||||||||||||| |     
T  39601020 atgtgtggtaagactagatgggataagattagaaatgacaacattagagagagagttggggtagta-----cctatagtagaaaagatggtggaaaacaa 39600926  T
Q  192 gtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtc 268  Q
    | |||||||||||    ||||| ||||||||| | |||||| |||||  | ||||||| |||| || ||||||||||    
T  39600925 gcttaggtggttttggcatgtaaagagaagacctgtagattctgtagcgaggagagtagatcagatcgaggatagtc 39600849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 262
Target Start/End: Complemental strand, 36820309 - 36820135
Alignment:
Q  82 tgttgcattggatgtgtggtaagactagatgagataggattagaaatgac-aaattagagagaaaattggggtagcatagcacctaaagtagaaaagatg 180  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| | |||||||||  | ||||||     ||||||||| | ||| |||||||    
T  36820309 tgttgcgttggatgtgtggtaagactagacgagataggattagaaatgacgacattagagag--agttgggg-----tagcacctatattagcaaagatg 36820217  T
Q  181 gtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgagg 262  Q
    ||||||| |||| |||||||||||    ||||| |||||||||  ||||||| ||||| || ||| ||| ||||||| ||||    
T  36820216 gtggaaactaggcttaggtggtttagacatgtaaagagaagacccatagattatgtagtaaggagggtagatcaaatagagg 36820135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 89 - 263
Target Start/End: Original strand, 19736935 - 19737106
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaa 187  Q
    ||||||| |||||||||||||| | |||| |||||||| ||| |  |||||||||| | ||||||  |||  ||||||| ||||||||||||||| ||||    
T  19736935 ttggatgagtggtaagactagacgggatacgattagaagtgaaatcattagagagagagttgggg--gca--gcacctatagtagaaaagatggtagaaa 19737030  T
Q  188 ataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgagga 263  Q
    |||||||||||||||||||  ||| ||||||||||| | ||||| |||||| ||  |||||| |||| || |||||    
T  19737031 ataggtttaggtggtttgagcatgcagagagaagacctgtagatgttgtagtaagaagagtagatcagatggagga 19737106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 89 - 263
Target Start/End: Original strand, 19757838 - 19758009
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaa 187  Q
    ||||||| |||||||||||| | |||||| |||||||| ||| |  |||||||||| | ||||||  |||  ||||||| ||||||||||||||| ||||    
T  19757838 ttggatgagtggtaagactacacgagatacgattagaagtgaaatcattagagagagagttgggg--gca--gcacctatagtagaaaagatggtagaaa 19757933  T
Q  188 ataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgagga 263  Q
    |||||||||||||||||||  ||| ||||||||||| | ||||| |||||| ||  |||||| |||| || |||||    
T  19757934 ataggtttaggtggtttgagcatgcagagagaagacctgtagatgttgtagtaagaagagtagatcagatggagga 19758009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 92 - 267
Target Start/End: Complemental strand, 45289434 - 45289260
Alignment:
Q  92 gatgtgtggtaagactagatgagataggattagaaatgacaaattagagagaaaa--ttggggtagcatagcacctaa--agtagaaaagatggtggaaa 187  Q
    |||||||| |||||||||| | |||| |||||||||||||| |||||||||| |   |||||||||||     ||||   ||||||||||||||||||||    
T  45289434 gatgtgtgataagactagacgggataagattagaaatgacacattagagagagagagttggggtagca-----cctattcagtagaaaagatggtggaaa 45289340  T
Q  188 ataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagt 267  Q
    ||||| ||||||||||||   | |||||||||| |||| |||||||||||| ||  |||||| |||| || |||||||||    
T  45289339 ataggcttaggtggtttgggcacgtagagagaacacttgtagattttgtagtaagaagagtagatcagatggaggatagt 45289260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 49503903 - 49503753
Alignment:
Q  83 gttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatgg 181  Q
    |||| |||||||| |||||||||||||| ||||||||||| | |||||||  |||||||||| | ||  |||||||     |||| ||||||||||||||    
T  49503903 gttggattggatgagtggtaagactagacgagataggattgggaatgacaccattagagagagagttcaggtagca-----cctatagtagaaaagatgg 49503809  T
Q  182 tggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgta 237  Q
    | ||||||||| ||||||||||||   |||||||||||||||  |||||| |||||    
T  49503808 tagaaaataggcttaggtggtttgggcatgtagagagaagaccaatagatgttgta 49503753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 277
Target Start/End: Complemental strand, 41842789 - 41842670
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    ||||||||| ||||||||||||||||||||  ||  ||||||||||||  |||||||||||||||    |||||| ||||| || ||||||| |||||||    
T  41842789 tagcacctatagtagaaaagatggtggaaaccagtcttaggtggtttgggtatgtagagagaagagcggtagattctgtagtaatgagagtagatcaaat 41842690  T
Q  258 tgaggatagtctggtcacta 277  Q
     |||||||||| | ||||||    
T  41842689 ggaggatagtcagatcacta 41842670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 52138711 - 52138869
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | ||||     ||    
T  52138711 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtggggg-----ta 52138805  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  52138806 gcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 52138869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 74 - 223
Target Start/End: Original strand, 49841535 - 49841688
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-atta--gagagaaaattggggtag-catagcacctaaag 169  Q
    |||||| ||||||  |||||||||| ||||||||||| ||| || ||||||||||||||| ||||  |||||| | ||||||||| | ||||||||| |     
T  49841535 gatgaggatgttgtgttggatgtgtagtaagactagacgaggtaagattagaaatgacaacattagtgagagagagttggggtagccgtagcacctatat 49841634  T
Q  170 tagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    |||||||||||||||||| |||  | ||||||||||    ||||||||||||||    
T  49841635 tagaaaagatggtggaaactagactaaggtggtttgggcgtgtagagagaagac 49841688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 268
Target Start/End: Complemental strand, 345054 - 344879
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatga-caaattagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaa 187  Q
    |||||| ||||||||||||||| |||||||||||||||||||  | |||||||||| | ||||||     |||||| || ||||||||||||| | ||||    
T  345054 ttggatttgtggtaagactagacgagataggattagaaatgatgacattagagagagagttgggg-----tagcacttatagtagaaaagatgttagaaa 344960  T
Q  188 ataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtc 268  Q
    ||||| ||| || ||||| | ||||||||||| ||| | || ||||| ||| || ||| ||| |||  || ||||||||||    
T  344959 ataggcttaagtagtttggtcatgtagagagaggacctgtaaattttttagtaatgagcgtagatcggatggaggatagtc 344879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 31337867 - 31337756
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaa 187  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||  |||||||||||| |||||      ||||||||| ||||||||||||||| ||||    
T  31337867 ttggatgtgtgataagactagatgggataggatta-aaatgacagcattagagagaaagttggg------tagcacctatagtagaaaagatggttgaaa 31337775  T
Q  188 ataggtttaggtggtttga 206  Q
     |||| ||| |||||||||    
T  31337774 ctaggcttaagtggtttga 31337756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 47233967 - 47233809
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||||  |||||| || |||| ||||||| ||||||||||||||   |||| ||||||||||||||  |||||||||| ||| | ||     ||    
T  47233967 taagtgtagcgaagatgaggatattgcgttggatgagtggtaagactagacatgataagattagaaatgacaccattagagagagaatggagg-----ta 47233873  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  47233872 gcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagac 47233809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 223
Target Start/End: Original strand, 54128302 - 54128447
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| ||||||| || |||| ||||||| |||||| | ||||||||||  |||||||  ||||||||||   |||||||||||     |||| |||||    
T  54128302 gatgaggatgttgcgtttgatgagtggtaaaactagacgcgataggattatgaatgacaccattagagagagtgttggggtagca-----cctatagtag 54128396  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    |||||||||| ||||||||| ||||||||||||   ||||||||| |||||    
T  54128397 aaaagatggtagaaaataggcttaggtggtttgggcatgtagagaaaagac 54128447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 50960911 - 50960846
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||||   |||||||||||||||    
T  50960911 tagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagac 50960846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 143
Target Start/End: Complemental strand, 50621731 - 50621648
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 143  Q
    |||||||||||| ||||||||||||||||| ||| |||||||||||||     |||||||||||||||||||| ||||||||||    
T  50621731 taagtgtagcggagatgagaatgttgcatttgatatgtggtaagactatgaatgataggattagaaatgacaacattagagaga 50621648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 222
Target Start/End: Complemental strand, 51448080 - 51447924
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  ||||||||||      | ||||  ||    
T  51448080 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagaga------gagtagggta 51447987  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaaga 222  Q
    ||||||| |||||||||| |||| ||||||||| |||| | |||||   ||||||||||||||    
T  51447986 gcacctatagtagaaaagttggtagaaaataggcttagatagtttgggcatgtagagagaaga 51447924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 38054695 - 38054625
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 143  Q
    |||||||||||||| ||| ||| |||||||||||||| | ||||||||||||||||| || ||||||||||    
T  38054695 gatgagaatgttgcgttgaatgggtggtaagactagacgggataggattagaaatgataacattagagaga 38054625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 2341072 - 2341003
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 142  Q
    |||||| ||||||||||||||||||||||||||||||   ||||| ||||||||||| || |||||||||    
T  2341072 gatgaggatgttgcattggatgtgtggtaagactagacatgatagaattagaaatgaaaacattagagag 2341003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 279
Target Start/End: Complemental strand, 30573040 - 30572956
Alignment:
Q  194 ttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtctggtcactaga 279  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||| || |||| || |||| || |||||||||| | ||||||||    
T  30573040 ttaggtggtttgatcatgtagagagaagacctatagattatgtagtaaggaga-tagatcagatggaggatagtcagctcactaga 30572956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 39235154 - 39235222
Alignment:
Q  170 tagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtag 238  Q
    ||||||||||||| ||||||||| ||||||||||||   ||||||||||||||| | ||||| ||||||    
T  39235154 tagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacctgtagatgttgtag 39235222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 26490319 - 26490366
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttg 205  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  26490319 tagcacctatagtagaaaagatggtagaaaataggcttaggtggtttg 26490366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 27917574 - 27917653
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgta 237  Q
    ||||||||| ||||||||||||||| | ||||||| |||| |||||||   ||||||| ||||||||| ||||| |||||    
T  27917574 tagcacctatagtagaaaagatggtaggaaataggcttagatggtttggacatgtagaaagaagacttgtagatgttgta 27917653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 220
Target Start/End: Original strand, 28245361 - 28245503
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| ||||||| ||||||| |||||||||||||    ||||||||||| |||||||  |||||||||| | | ||||     ||||||||| |||||    
T  28245361 gatgaggatgttgcgttggatgagtggtaagactagcctggataggattaggaatgacatcattagagagagagtggggg-----tagcacctatagtag 28245455  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaa 220  Q
    ||||| |||| ||||||||  |||| |||||||   ||||||||||||    
T  28245456 aaaagttggtagaaaatagacttagatggtttgggcatgtagagagaa 28245503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 54278931 - 54279089
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||| ||||||  ||||||||||||||  |||||| ||||| |||||||  |||||||||| | | ||||     ||    
T  54278931 taagtgtagcagagatgaggatgttgcgttggataagtggtaagactagacaagatagaattaggaatgacaccattagagagagagtagggg-----ta 54279025  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| ||||||||| ||||  ||||||   | |||||||||||||    
T  54279026 gcacctatagtagaaaagttggtagaaaataggcttagacggtttgggcacgtagagagaagac 54279089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 21200562 - 21200648
Alignment:
Q  168 agtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatca 254  Q
    |||||||||||||||||||| |||  ||||||||||||   ||||||||||||||| | |||||| || || || ||||||| ||||    
T  21200562 agtagaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagacatgtagattctgcagtaaggagagtagatca 21200648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 42026804 - 42026718
Alignment:
Q  168 agtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatca 254  Q
    ||||||||||| |||||||| |||| |||||||||||||   ||||||||||| |||| |||||| | ||| || ||||||| ||||    
T  42026804 agtagaaaagagggtggaaactaggcttaggtggtttgagcttgtagagagaaaacttgtagattatttagtaaggagagtagatca 42026718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 46432022 - 46431972
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgac 131  Q
    ||||||||||||||||||||||||||||||   |||||| |||||||||||    
T  46432022 atgttgcattggatgtgtggtaagactagacaggatagggttagaaatgac 46431972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 3987054 - 3987117
Alignment:
Q  161 cacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagact 224  Q
    |||||| ||||||||||||||| |||| |||  ||||||||||||   ||||||||||||||||    
T  3987054 cacctatagtagaaaagatggtagaaactagacttaggtggtttgggaatgtagagagaagact 3987117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 33272399 - 33272328
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 132  Q
    |||||||||| | |||||| ||||||||||||||| ||||||||||||||   ||||||||||  |||||||    
T  33272399 taagtgtagcagagatgaggatgttgcattggatgagtggtaagactagacatgataggattaagaatgaca 33272328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 249
Target Start/End: Complemental strand, 44443470 - 44443391
Alignment:
Q  170 tagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagta 249  Q
    |||||||||||||||||| | || ||| || |||||   ||||||||||||||||| |||||| ||||| || |||||||    
T  44443470 tagaaaagatggtggaaactcggcttaagtagtttgcacatgtagagagaagacttttagattctgtagtaaggagagta 44443391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 45236787 - 45236838
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 132  Q
    ||||||| ||||||||||||||||||||||   |||| ||||||||||||||    
T  45236787 atgttgcgttggatgtgtggtaagactagactggatatgattagaaatgaca 45236838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 45728057 - 45728128
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 132  Q
    |||||||||| | |||||| |||||||  |||||| |||||||||| ||| || ||||||||||||||||||    
T  45728057 taagtgtagcagagatgaggatgttgcgctggatgagtggtaagacgagacgaaataggattagaaatgaca 45728128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 143
Target Start/End: Original strand, 46568027 - 46568110
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 143  Q
    |||||||||| | |||||| ||||||  ||||||||||| ||||||||||  |||| | |||||||||||||| ||||||||||    
T  46568027 taagtgtagcagagatgaggatgttgtgttggatgtgtgttaagactagaccagattgaattagaaatgacaacattagagaga 46568110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 50249320 - 50249432
Alignment:
Q  89 ttggatgtgtggtaagactagatgagatag---gattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtgg 184  Q
    |||||||||||||| ||||||| |||||||   |||||||||||| || |||||||||| | ||||||     |||| | || |||||||||||||||||    
T  50249320 ttggatgtgtggtaggactagacgagataggatgattagaaatgataacattagagagagagttgggg-----tagcgcgtatagtagaaaagatggtgg 50249414  T
Q  185 aaaataggtttaggtggt 202  Q
    ||| |||  |||||||||    
T  50249415 aaactagacttaggtggt 50249432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 223
Target Start/End: Original strand, 21997 - 22141
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| |||||||  |||||| ||||||||||||||   ||||||||||| |||| ||  |||||||||| | | ||||     ||||||||| |||||    
T  21997 gatgaggatgttgcgctggatgagtggtaagactagacatgataggattaggaatgtcaccattagagagagagtggggg-----tagcacctatagtag 22091  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||| |||| | ||||||| |||| |||||||   |||||||||||||||    
T  22092 aaaagttggtag-aaataggcttagatggtttggacatgtagagagaagac 22141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 11663574 - 11663632
Alignment:
Q  75 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    ||||| |||| || ||||||||||||||||| | |||||||||| |||||| |||||||    
T  11663574 atgaggatgtcgcgttggatgtgtggtaagattcgatgagatagaattagatatgacaa 11663632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 48734403 - 48734349
Alignment:
Q  168 agtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaaga 222  Q
    ||||||| ||||||| ||||||||| ||||||||||||   ||||||||||||||    
T  48734403 agtagaacagatggtagaaaataggcttaggtggtttgggcatgtagagagaaga 48734349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 5168836 - 5168901
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    |||||||||  ||||||||| |||| ||||||| | |||| ||||||||  |||||||||||||||    
T  5168836 tagcacctatggtagaaaagttggtagaaaatacgcttagatggtttgaacatgtagagagaagac 5168901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 11581460 - 11581513
Alignment:
Q  170 tagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||||||| |||| |||  ||||||||||||  ||||||||||||||||    
T  11581460 tagaaaagatggtagaaactagacttaggtggtttgggtatgtagagagaagac 11581513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 19676447 - 19676398
Alignment:
Q  75 atgagaatgttgcattggatgtgtggtaagactagatgagataggattag 124  Q
    ||||| ||||||||||||||| | |||||||||||||| |||| ||||||    
T  19676447 atgaggatgttgcattggatgagcggtaagactagatgggataagattag 19676398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 26388487 - 26388532
Alignment:
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttg 205  Q
    ||||||| | ||||||||||||| ||||||||||||||||| ||||    
T  26388487 gcacctataatagaaaagatggtagaaaataggtttaggtgatttg 26388532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 35033150 - 35033215
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| |||||||||| |||| ||||||||| |||  |||||||   |||||||||||||||    
T  35033150 tagcacctatagtagaaaagttggtagaaaataggcttatatggtttggacatgtagagagaagac 35033215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 38060435 - 38060500
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| | |||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  38060435 tagcacctataatagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagac 38060500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 38430852 - 38430913
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagaga 219  Q
    ||||||||| ||||||||||||||| ||||||||| |||||| | |||   |||||||||||    
T  38430852 tagcacctatagtagaaaagatggtagaaaataggcttaggttgattgggcatgtagagaga 38430913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 44134098 - 44134061
Alignment:
Q  168 agtagaaaagatggtggaaaataggtttaggtggtttg 205  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  44134098 agtagaaaagatggtggaaaatagacttaggtggtttg 44134061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 33272290 - 33272234
Alignment:
Q  168 agtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagact 224  Q
    |||||||||| |||| ||||||||| |||| |||||||   ||||||||||||||||    
T  33272290 agtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 33272234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 284
Target Start/End: Original strand, 46140446 - 46140562
Alignment:
Q  168 agtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagt 267  Q
    ||||||||||| |||||||| |||  | ||||||||||   || |||||||||||| | |||||| ||||| ||| | || | |||| ||||| ||||||    
T  46140446 agtagaaaagacggtggaaactagactcaggtggtttggacatatagagagaagacctgtagattctgtagtaaaaatagcagatcagattgatgatagt 46140545  T
Q  268 ctggtcactagaggaat 284  Q
    | | ||||||| |||||    
T  46140546 cagatcactaggggaat 46140562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 5e-22; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 75 - 223
Target Start/End: Original strand, 33083983 - 33084127
Alignment:
Q  75 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtaga 173  Q
    ||||| ||| ||| |||||||||||||||||||||||| ||||| |||||||||||| | |||||||||| | |||||||||||     ||||  |||||    
T  33083983 atgaggatgctgcgttggatgtgtggtaagactagatgggatagaattagaaatgacgatattagagagagagttggggtagca-----cctatggtaga 33084077  T
Q  174 aaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| |||| |||  ||||||||||||   |||||||||||||||    
T  33084078 aaagatggtagaaactagacttaggtggtttgggaatgtagagagaagac 33084127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 12134259 - 12134145
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||||||||||  |||||||||||| ||||| |||||| |||| |||||||||||||| |||||||||| ||||| ||     ||  ||||| |||||    
T  12134259 gatgagaatgttgtgttggatgtgtggcaagacaagatgatatagaattagaaatgacaatattagagagagaattgagg-----tacgacctatagtag 12134165  T
Q  173 aaaagatggtggaaaatagg 192  Q
    ||||||||||||||||||||    
T  12134164 aaaagatggtggaaaatagg 12134145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 98 - 249
Target Start/End: Original strand, 2079288 - 2079435
Alignment:
Q  98 tggtaagactagatgagataggat-tagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaataggttt 195  Q
    ||||||||||| |||||||| ||| |||||||||||| |||||||||  | |||||      ||||| ||| ||||||||||||||||||||||||| ||    
T  2079288 tggtaagactaaatgagatatgatatagaaatgacaatattagagagggagttggg------tagcatctatagtagaaaagatggtggaaaataggctt 2079381  T
Q  196 aggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagta 249  Q
    | |||||||   ||||||||||||||| || |||||| ||||| || |||||||    
T  2079382 aagtggtttaggtatgtagagagaagatttgtagattatgtagtaaggagagta 2079435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 9594070 - 9593874
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagca-tagcacctaaagta 171  Q
    |||||| ||||||| ||||||| |||||||||||||| | ||||||||||| |||||||  |||||||||| |   || || |   |||||||   ||||    
T  9594070 gatgaggatgttgcgttggatgagtggtaagactagacgggataggattaggaatgacaccattagagagagagagggagttggggtagcaccattagta 9593971  T
Q  172 gaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtc 268  Q
    ||||||||||| ||||||||| ||||||||||||   ||||||||||||||| | |||||  ||||| ||  |||||| |||| || ||||| ||||    
T  9593970 gaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacatgtagatgctgtagtaagaagagtagatcagatggaggagagtc 9593874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 5258521 - 5258361
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagaga-aaattggggtagcat 158  Q
    |||||||||||| | |||||||||||| ||||||| ||||||||||||||  |||||||||||  |||||||   ||||||||| | | |||||     |    
T  5258521 taagtgtagcggaggtgagaatgttgcgttggatgagtggtaagactagacaagataggattatgaatgacaccgttagagagagagagtgggg----gt 5258426  T
Q  159 agcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    |||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  5258425 agcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagac 5258361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 28085287 - 28085445
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||  |||||||  |||||||||| | | ||||     ||    
T  28085287 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattacgaatgacaccattagagagagagtggggg-----ta 28085381  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  28085382 gcacctatagtagaaaagttggtagaaaataggcttagatggtttggccatgtagagagaagac 28085445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 33998355 - 33998292
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgac-aaattagagaga 143  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||| | ||||||||||    
T  33998355 atgttgcgttggatgtgtggtaagactagatgtgataggattagaaatgactacattagagaga 33998292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 31818449 - 31818518
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatga 130  Q
    |||||||||| | ||||||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||    
T  31818449 taagtgtagcagagatgagaatgttgcattggatatgtgttaagattagatgagataagattagaaatga 31818518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 7513334 - 7513283
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 132  Q
    ||||||| ||||||||||||||||||||||||||||| |||| |||||||||    
T  7513334 atgttgcgttggatgtgtggtaagactagatgagataagatttgaaatgaca 7513283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 280
Target Start/End: Complemental strand, 14389445 - 14389324
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    |||||||||  |||||||||||||||||||  |  || ||||||||||   ||||||||||||||| |||||| ||||||| || |||| || |||| ||    
T  14389445 tagcacctatcgtagaaaagatggtggaaacaaactt-aggtggtttggacatgtagagagaagacctatagactttgtagtaaggagaatagatcagat 14389347  T
Q  258 tgaggatagtctggtcactagag 280  Q
     |||||||||| | |||||||||    
T  14389346 ggaggatagtcagatcactagag 14389324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 205
Target Start/End: Original strand, 9706687 - 9706827
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||||| |||||| |||||||| |||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | | ||     ||    
T  9706687 taagtgtagcggagatgaggatgttgcactggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtggagg-----ta 9706781  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttg 205  Q
    |||||||  ||||||||| |||| ||||||||| |||| |||||||    
T  9706782 gcacctattgtagaaaagttggtagaaaataggcttagatggtttg 9706827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 24665818 - 24665911
Alignment:
Q  162 acctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttataga-ttttgtaggaaagagagtatatca 254  Q
    ||||| ||||||||| ||||| ||||||||| ||||||||||||   ||||||||||||||| | |||| |||||||| || ||||||| ||||    
T  24665818 acctatagtagaaaatatggtagaaaataggcttaggtggtttggacatgtagagagaagacctgtagatttttgtagtaaggagagtagatca 24665911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 43318 - 43250
Alignment:
Q  170 tagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtag 238  Q
    ||||||| |||||||||| |||| ||||||||| ||   |||||||||||||| |||||||||||||||    
T  43318 tagaaaaaatggtggaaactaggcttaggtggtctggccatgtagagagaagatttatagattttgtag 43250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 608070 - 608141
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 132  Q
    |||||||||||| |||||| ||||| | ||||||| |||||||||||||||  ||||||||||| |||||||    
T  608070 taagtgtagcggagatgaggatgttccgttggatgagtggtaagactagataggataggattaggaatgaca 608141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 8364520 - 8364559
Alignment:
Q  94 tgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  8364520 tgtgtggtaagactagatgggataggattagaaatgacaa 8364559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 20428007 - 20427849
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||||| |||||| |||||||  |||||| |||||| ||| |||   ||||||||||| |||||||  |||||||||| | | ||||     ||    
T  20428007 taagtgtagcggagatgaggatgttgcgctggatgagtggtaggacaagacaggataggattaggaatgacaccattagagagagagtggggg-----ta 20427913  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| ||||||||| |||| ||||||||   |||| |||||||||    
T  20427912 gcacctatagtagaaaagttggtagaaaataggcttagatggtttgaacgtgtatagagaagac 20427849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 5129195 - 5129125
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 143  Q
    |||||| ||||||| ||| ||||||||||||| | |||| ||| |||||||||||||||| ||||||||||    
T  5129195 gatgaggatgttgcgttgaatgtgtggtaagattcgatgtgatcggattagaaatgacaatattagagaga 5129125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 254
Target Start/End: Complemental strand, 6907103 - 6907009
Alignment:
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatca 254  Q
    ||||||| ||||||| |||||||   || |||| ||| || ||||| ||||||||||||||||| | |||||||||||| || ||||||| ||||    
T  6907103 gcacctatagtagaatagatggtcagaactaggcttacgtagtttggttatgtagagagaagacatgtagattttgtagtaaggagagtagatca 6907009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 7150670 - 7150628
Alignment:
Q  80 aatgttgcattggatgtgtggtaagactagatgagataggatt 122  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  7150670 aatgttgctttggatgtgtggtaagactagacgagataggatt 7150628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 283
Target Start/End: Complemental strand, 6293660 - 6293539
Alignment:
Q  162 acctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgag 261  Q
    ||||| |||| |||| |||||||||| |||||| ||||||||||   |||||||||||| || | |||||| ||||  || ||||||| |||| ||  ||    
T  6293660 acctatagtacaaaatatggtggaaactaggttcaggtggtttgggcatgtagagagaacacctgtagattatgtaataaggagagtaaatcagatgaag 6293561  T
Q  262 gatagtctggtcactagaggaa 283  Q
    |||||||   ||||||||||||    
T  6293560 gatagtcaaatcactagaggaa 6293539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 223
Target Start/End: Original strand, 30031169 - 30031325
Alignment:
Q  64 agtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagc 161  Q
    |||||||||| ||||||  |||||  ||||||| |||||||||||||| | |||||||||||||||| ||  |||||||||  | | ||||     ||||    
T  30031169 agtgtagcggagatgaggttgttgtgttggatgagtggtaagactagacgggataggattagaaatgtcaccattagagagggagtggggg-----tagc 30031263  T
Q  162 acctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||| |||||||||| |||| ||||||||| |||| ||  |||   |||||||||||||||    
T  30031264 acctatagtagaaaagttggtagaaaataggcttagatgagttggacatgtagagagaagac 30031325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 10100228 - 10100157
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 132  Q
    |||||||||||| |||||| ||||||| || |||| ||||||||||||||  | ||| ||||||||||||||    
T  10100228 taagtgtagcggagatgaggatgttgcgttagatgagtggtaagactagacaatatatgattagaaatgaca 10100157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 26291788 - 26291856
Alignment:
Q  161 cacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagat 231  Q
    |||||| | ||||||| ||||| ||||||||  ||||||||||||   |||||||||||||||||||||||    
T  26291788 cacctataatagaaaatatggtagaaaatagacttaggtggtttgc--atgtagagagaagacttatagat 26291856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 281
Target Start/End: Original strand, 579460 - 579545
Alignment:
Q  196 aggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtctggtcactagagg 281  Q
    |||| ||||||  ||||||||||||| ||| |||||| | ||| || ||||||  |||| || |||||||||||| ||||||||||    
T  579460 aggtagtttgagcatgtagagagaaggcttgtagattatatagtaaggagagttgatcagatggaggatagtctgatcactagagg 579545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 4948678 - 4948629
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactaga 110  Q
    |||||||||||| ||| || ||||||| ||||||||||||||||||||||    
T  4948678 taagtgtagcggagattaggatgttgctttggatgtgtggtaagactaga 4948629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 4955649 - 4955600
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactaga 110  Q
    |||||||||||| ||| || ||||||| ||||||||||||||||||||||    
T  4955649 taagtgtagcggagattaggatgttgctttggatgtgtggtaagactaga 4955600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 5897483 - 5897520
Alignment:
Q  168 agtagaaaagatggtggaaaataggtttaggtggtttg 205  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  5897483 agtagaaaagatggtggaaaataggcttaagtggtttg 5897520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 10617574 - 10617525
Alignment:
Q  84 ttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    |||| ||||||||||| |||||||||| || |||| ||||||||||||||    
T  10617574 ttgcgttggatgtgtgttaagactagacgaaatagaattagaaatgacaa 10617525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 251
Target Start/End: Original strand, 18905894 - 18905974
Alignment:
Q  170 tagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtata 251  Q
    |||||||||||||||||| | ||||||||||||||||  ||||||||| || ||||   |||||||||| |||  |||||||    
T  18905894 tagaaaagatggtggaaatt-ggtttaggtggtttgagcatgtagagataatacttgctgattttgtagtaaaaggagtata 18905974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 29020171 - 29020111
Alignment:
Q  171 agaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagatt 232  Q
    ||||||||||||||||| | |  || ||||||||||| |||| |||||||||||||||||||    
T  29020171 agaaaagatggtggaaactcgactttggtggtttgat-atgtggagagaagacttatagatt 29020111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 9568591 - 9568643
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    ||||||| ||||||||||||||||||||||   ||||| |||| |||||||||    
T  9568591 atgttgcgttggatgtgtggtaagactagacatgatagaattataaatgacaa 9568643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 5e-22; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 6888932 - 6889064
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaa 187  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||| | | ||||||     |||||| || ||  ||||||||||||||||    
T  6888932 ttggatgtgtggtaagactagatgagatatgattagaaatgacaatattacagaaagagttgggg-----tagcacgtatagaggaaaagatggtggaaa 6889026  T
Q  188 ataggtttaggtggtttgattatgtagagagaagactt 225  Q
    ||||| ||| ||||||||   |||||||||||||||||    
T  6889027 ataggcttaagtggtttggacatgtagagagaagactt 6889064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 158 - 283
Target Start/End: Original strand, 43475244 - 43475369
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    ||||||||| |||||||||||||||||||| |||| ||||||||||||  |||  ||||||||||| | ||||| |||||| || ||||||| |||| ||    
T  43475244 tagcacctatagtagaaaagatggtggaaactaggcttaggtggtttgggtattcagagagaagacctgtagatgttgtagtaaggagagtagatcagat 43475343  T
Q  258 tgaggatagtctggtcactagaggaa 283  Q
     |||||||||| | |||||| |||||    
T  43475344 ggaggatagtcagatcactataggaa 43475369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 28187026 - 28186944
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtag 155  Q
    |||||||||||||||||||||||||||||||||||||   | |||||||||||||||||| |||||||||||  |||||||||    
T  28187026 gatgagaatgttgcattggatgtgtggtaagactagacatggtaggattagaaatgacaacattagagagaaggttggggtag 28186944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 161 - 281
Target Start/End: Complemental strand, 7359534 - 7359415
Alignment:
Q  161 cacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattga 260  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||   ||||||||||||||  | |||||| ||||| || ||||||| |||| || ||    
T  7359534 cacctatagtagaaaatatggtggaaaataggtttaggtggtttg-gcatgtagagagaagatatgtagattctgtagtaaggagagtagatcagatgga 7359436  T
Q  261 ggatagtctggtcactagagg 281  Q
    ||||||||   ||||||||||    
T  7359435 ggatagtcatatcactagagg 7359415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 281
Target Start/End: Original strand, 21093772 - 21093879
Alignment:
Q  174 aaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtctggtc 273  Q
    |||| |||||||||||||| |||||| |||||   |||||||| ||||||||  ||||||||||| |||||||||| |||| || |||||||||| | ||    
T  21093772 aaagttggtggaaaataggcttaggtagtttgggcatgtagagggaagacttggagattttgtagtaaagagagtagatcagatggaggatagtcagatc 21093871  T
Q  274 actagagg 281  Q
    ||||||||    
T  21093872 actagagg 21093879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 72 - 249
Target Start/End: Complemental strand, 10083098 - 10082926
Alignment:
Q  72 gggatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagt 170  Q
    |||||||| ||||||| ||| |||||||||||||||||| | ||||| ||||||||||| || ||||| ||||  ||||||||| ||     |||| |||    
T  10083098 gggatgaggatgttgctttg-atgtgtggtaagactagacgggatagaattagaaatgagaacattagggagagcattggggtatca-----cctatagt 10083005  T
Q  171 agaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagta 249  Q
    |||||||||||| |||| |||  ||| |||||||    ||||||||||||||||| | |||| ||||| ||||||||||    
T  10083004 agaaaagatggtagaaactagacttaagtggtttcggcatgtagagagaagacttgtggattctgtagtaaagagagta 10082926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 14667696 - 14667814
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga-aaattggggtagcatagcacctaaagtagaaaagatggtggaa 186  Q
    ||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||| | |  | | | |  ||||||||| |||||||||||||||||||    
T  14667696 ttggatgtgtgataagactagatgaggtagaattagaaatgacaatattagagagagagagagagttggggtagcacctatagtagaaaagatggtggaa 14667795  T
Q  187 aataggtttaggtggtttg 205  Q
    |||||  ||||||||||||    
T  14667796 aatagacttaggtggtttg 14667814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 281
Target Start/End: Original strand, 79521 - 79640
Alignment:
Q  162 acctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgag 261  Q
    ||||| ||||||||||||||||||||| |   ||||||||||||   ||||||||||||||| |||||||| ||||| || ||||||  ||||||| |||    
T  79521 acctatagtagaaaagatggtggaaaacataattaggtggtttggacatgtagagagaagacctatagattctgtagtaaggagagtcgatcaaatggag 79620  T
Q  262 gatagtctggtcactagagg 281  Q
    ||| ||| | |||| |||||    
T  79621 gatggtcggatcacaagagg 79640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 2075845 - 2075687
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||| ||||||| || |||||||||||  |||||||||||| |||||||| |||||||||| | | ||||     ||    
T  2075845 taagtgtagcagagatgaggatgttgcgttggatgagttgtaagactagacaagataggattaggaatgacaacattagagagagagtggggg-----ta 2075751  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
     |||||| |||||||||| |||| || |||||| |||| |||||||   |||||||||||||||    
T  2075750 acacctacagtagaaaagttggtagacaataggcttagatggtttgggcatgtagagagaagac 2075687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 9234999 - 9235062
Alignment:
Q  80 aatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 142  Q
    ||||||||||||||||||||||||||||||| | |||||||||| ||||||||| |||||||||    
T  9234999 aatgttgcattggatgtgtggtaagactagacgggataggattataaatgacaacattagagag 9235062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 684033 - 683980
Alignment:
Q  91 ggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 143  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  684033 ggatgtgtggtaagactagatgagatagaattagaaatgacaatattagagaga 683980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 223
Target Start/End: Complemental strand, 16347749 - 16347591
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcata 159  Q
    |||||||||||| |||||| ||||||| ||||||| ||||||||||||||  | ||| ||||| |||||| |  |||||||||| |   |||||||||      
T  16347749 taagtgtagcggagatgaggatgttgcgttggatgagtggtaagactagacaatatatgattaaaaatgaaaccattagagagagagcgggggtagca-- 16347652  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
       |||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  16347651 ---cctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagac 16347591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 21952275 - 21952424
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aatt--agagagaaaattggggtagcatagcacctaaagt 170  Q
    |||||| ||||||| ||| |||||||||||||||||| |||||| ||||||||||||||  |||  |||||||   |||||||| || | |||||| |||    
T  21952275 gatgaggatgttgcgttgcatgtgtggtaagactagacgagataagattagaaatgacagcattaaagagagagggttggggtaacaca-cacctatagt 21952373  T
Q  171 agaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaag 221  Q
    |||||||||||  |||| |||  | ||||||||||   |||||||||||||    
T  21952374 agaaaagatggcagaaactagactcaggtggtttggacatgtagagagaag 21952424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 222
Target Start/End: Original strand, 1275189 - 1275332
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    |||||| ||||||| ||||||| ||||||||||||||   | ||||||||| |||||||  |||||||||| | | |||      ||||||||| |||||    
T  1275189 gatgaggatgttgcgttggatgagtggtaagactagacatggtaggattaggaatgacaccattagagagagagtgggg------tagcacctatagtag 1275282  T
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaaga 222  Q
    ||||| |||| ||||||||| |||| |||||||   ||||||||||||||    
T  1275283 aaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 1275332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 11002779 - 11002709
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 143  Q
    |||||| |||||||  ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||    
T  11002779 gatgaggatgttgcgctggatgtgtggtaagacgagatgggatagaattagaaatgacaacattagagaga 11002709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 41110099 - 41109908
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 172  Q
    ||||| ||||||||  ||||||||| || ||||||||||  ||||||||||||||||||| | ||||||||       | | |||||||||||| |||      
T  41110099 gatgaaaatgttgcgctggatgtgtagtgagactagatggaataggattagaaatgacaacactagagaga-------gttggcatagcacctatagtta 41110007  T
Q  173 aaaaga---tggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtc 268  Q
    ||||||   ||||||||| | |  |||||||||||||  ||||||||||||| | |||||||||||||| || || |||| |||  || ||||||||||    
T  41110006 aaaagatggtggtggaaactggccttaggtggtttgaacatgtagagagaaggcctatagattttgtagtaaggatagtagatcggatggaggatagtc 41109908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 42199300 - 42199386
Alignment:
Q  168 agtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatca 254  Q
    |||||||||||||||||||| |||  ||||||||||||   ||||||||||||||| | |||||| ||||| || ||||||| ||||    
T  42199300 agtagaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagacatgtagattctgtagtaaggagagtagatca 42199386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 20456777 - 20456842
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| |||||||||| |||| ||||||||| |||| ||||||||  |||||||||||||||    
T  20456777 tagcacctatagtagaaaagttggtagaaaataggcttagatggtttgaacatgtagagagaagac 20456842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 27897 - 27945
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttga 206  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  27897 tagcacctatagtagaaaagatgatggaaaataggcttaggtggtttga 27945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 5305547 - 5305610
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 143  Q
    ||||||| ||||||||||||||||||||||  |||||| ||||||||| |||| ||||||||||    
T  5305547 atgttgcgttggatgtgtggtaagactagacaagatagaattagaaataacaacattagagaga 5305610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 7678404 - 7678463
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    |||||| ||||||| |||||| ||||| ||||||||||  ||||||||||||||||||||    
T  7678404 gatgaggatgttgcgttggatctgtggcaagactagataggataggattagaaatgacaa 7678463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 21093701 - 21093768
Alignment:
Q  75 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagaga 141  Q
    ||||| ||||||| ||| |||||||||||||||||||| ||| | |||||||||||||| ||||||||    
T  21093701 atgaggatgttgcgttgtatgtgtggtaagactagatgtgatggaattagaaatgacaatattagaga 21093768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 223
Target Start/End: Original strand, 24178421 - 24178579
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcata 159  Q
    |||||||||| | |||||| ||||||| ||||||| |||||||||||| |   ||||||||||  |||||||  |||||||||| | | ||||     ||    
T  24178421 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactatacatgataggattaagaatgacaccattagagagagagtggggg-----ta 24178515  T
Q  160 gcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||| |||||||||| |||| ||||||||| |||| |||||||   |||| ||||||||||    
T  24178516 gcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtggagagaagac 24178579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 280
Target Start/End: Original strand, 30588465 - 30588573
Alignment:
Q  170 tagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtct 269  Q
    ||||||||||||||||||||||||||| ||||||||   || |   |||||||||| |||||| ||||| || ||||||| ||  ||| ||||||||||     
T  30588465 tagaaaagatggtggaaaataggtttaagtggtttgggcatattcggagaagacttgtagattctgtagtaaggagagtagat--aatggaggatagtca 30588562  T
Q  270 ggtcactagag 280  Q
    |||||| ||||    
T  30588563 ggtcacgagag 30588573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 6368282 - 6368224
Alignment:
Q  75 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    ||||| ||||||| || |||||||||||||| |||| ||||||| ||||||||||||||    
T  6368282 atgaggatgttgcgttagatgtgtggtaagaatagacgagatagaattagaaatgacaa 6368224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 1287857 - 1287792
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  1287857 tagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 1287792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 238
Target Start/End: Complemental strand, 4026673 - 4026533
Alignment:
Q  93 atgtgtggtaagactagatgagataggattagaaatgacaaattagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaatagg 192  Q
    ||||||||||||||||||||||||| ||||| ||| || ||  |  ||||| | |||||||| ||     | ||||||| ||||||||||||||| |||     
T  4026673 atgtgtggtaagactagatgagataagattaaaaacgagaacatgaagagagagttggggtaaca-----cgtaaagtaaaaaagatggtggaaactagt 4026579  T
Q  193 tttaggtggtttgattatgtagagagaagacttatagattttgtag 238  Q
     ||||||||||||   |||||||||| |||| | |||||| |||||    
T  4026578 cttaggtggtttggacatgtagagaggagacctgtagattctgtag 4026533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 4496388 - 4496453
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  4496388 tagcacctatagtagaaaagctggtagaaaataggcttagatggtttgggcatgtagagagaagac 4496453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 251
Target Start/End: Complemental strand, 18132002 - 18131921
Alignment:
Q  170 tagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtata 251  Q
    |||||||||||||||||||| | ||||||||||||||  ||||||||| || ||||   |||||||||| |||  |||||||    
T  18132002 tagaaaagatggtggaaaattgatttaggtggtttgagcatgtagagataatacttgctgattttgtagtaaaaggagtata 18131921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 28676599 - 28676664
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||| ||| ||||||||||||||||||||||||  |||||||||||    |||||||||||||||    
T  28676599 tagcagctatagtagaaaagatggtggaaaatagtcttaggtggtttcggcatgtagagagaagac 28676664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 28977137 - 28977072
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  28977137 tagcacctatagtagaaaagttggtagaaaataggcttagatggtttgtgcatgtagagagaagac 28977072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 31636198 - 31636133
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| ||||||||||||||| |||| |||  ||||||||||||   |||||||||||||||    
T  31636198 tagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagaagac 31636133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 204
Target Start/End: Original strand, 32516497 - 32516606
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaa 187  Q
    ||||||||||||||||||||||   |||||  ||||||||||||| ||||||||||   |||| ||| ||     | || ||||||||||||||||||||    
T  32516497 ttggatgtgtggtaagactagacaggatagacttagaaatgacaacattagagagag--ttggagtaaca-----cttatagtagaaaagatggtggaaa 32516589  T
Q  188 ataggtttaggtggttt 204  Q
    ||||| |||||||||||    
T  32516590 ataggcttaggtggttt 32516606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 33667220 - 33667285
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| ||||||||||||||| |||| |||  ||||||||||||   |||||||||||||||    
T  33667220 tagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagaagac 33667285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 38684971 - 38685036
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  38684971 tagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagac 38685036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 251
Target Start/End: Original strand, 43522623 - 43522704
Alignment:
Q  170 tagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtata 251  Q
    |||||||||||||||||||| | ||||||||||||||  || |||||| || |||| | |||||||||| |||  |||||||    
T  43522623 tagaaaagatggtggaaaattgatttaggtggtttgagcatatagagataatacttgttgattttgtagtaaaaggagtata 43522704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 219811 - 219727
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagca 157  Q
    |||||||||||||| ||||||| ||| |||||| ||| |||||| |||||  |||||||| ||| |||||| | |||||||||||    
T  219811 gatgagaatgttgcgttggatgcgtgttaagacaagacgagataagattacgaatgacaacattggagagagagttggggtagca 219727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 16134536 - 16134480
Alignment:
Q  75 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgac 131  Q
    ||||| ||||||  |||||||| ||||||||||||||||||||  ||||||||||||    
T  16134536 atgaggatgttgtgttggatgtatggtaagactagatgagataaaattagaaatgac 16134480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 27249224 - 27249304
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtag 238  Q
    ||||||| | |||||||||||  ||||||| |||| |||||||||||||   ||||| |||||||| | ||||||||||||    
T  27249224 tagcacccatagtagaaaagaaagtggaaattaggcttaggtggtttgagcttgtagggagaagacctgtagattttgtag 27249304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 1287960 - 1287889
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 132  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||    
T  1287960 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgaca 1287889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 15168796 - 15168843
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttg 205  Q
    ||||||||| ||||||||||||||| ||||||||| | ||||||||||    
T  15168796 tagcacctatagtagaaaagatggtagaaaataggctaaggtggtttg 15168843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 37124571 - 37124662
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagta 249  Q
    ||||||||| ||| ||||||||| ||||||||||| ||| ||  ||||| | ||| |||||||||| |||| ||| ||||| || |||||||    
T  37124571 tagcacctatagttgaaaagatgatggaaaataggcttaagtcatttgagtttgttgagagaagacctatatattatgtagtaaggagagta 37124662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 5848447 - 5848401
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagact 107  Q
    |||||||||| | |||||| |||||||||||||||||||||||||||    
T  5848447 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 5848401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 25937973 - 25938035
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaa 220  Q
    ||||| ||| ||||||||| ||||||||| | |||||||||||||||||  || |||||||||    
T  25937973 tagcatctatagtagaaaaaatggtggaagaaaggtttaggtggtttgagcatatagagagaa 25938035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 27998478 - 27998528
Alignment:
Q  173 aaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| ||||| |||| ||| || |||||||||||||||||||||||    
T  27998478 aaaagatgggggaaactaggcttaagtagtttgattatgtagagagaagac 27998528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 204
Target Start/End: Original strand, 29938131 - 29938165
Alignment:
Q  170 tagaaaagatggtggaaaataggtttaggtggttt 204  Q
    ||||||||||||||||||||||| |||||||||||    
T  29938131 tagaaaagatggtggaaaataggcttaggtggttt 29938165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 30588384 - 30588446
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 142  Q
    ||||||| | |||||||||||||||  | |||||||| ||||||||||||||| |||||||||    
T  30588384 atgttgcgtgggatgtgtggtaagatcaaatgagatatgattagaaatgacaatattagagag 30588446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 3301848 - 3301913
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    |||| |||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  3301848 tagcccctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagac 3301913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 15986989 - 15986892
Alignment:
Q  184 gaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaattgaggatagtctggtcactagagg 281  Q
    ||||||||||||||||||||||    |||||||||||||  | |||||| | ||| || ||||||  ||||||| |||||||||| | |||| |||||    
T  15986989 gaaaataggtttaggtggtttgggcgtgtagagagaagatatgtagattctatagtaaggagagtggatcaaatggaggatagtcagatcacaagagg 15986892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 34272933 - 34272982
Alignment:
Q  62 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactaga 110  Q
    |||||||||| | |||||| ||||||||||||||| ||||||||||||||    
T  34272933 taagtgtagcagagatgaggatgttgcattggatgagtggtaagactaga 34272982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 34273031 - 34273096
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| | |||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  34273031 tagcacctataatagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 34273096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 43558093 - 43558032
Alignment:
Q  170 tagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagat 231  Q
    |||||||||||||||||| || | ||||||||||||   || |||||||||||||| |||||    
T  43558093 tagaaaagatggtggaaactaagcttaggtggtttgggcatatagagagaagacttgtagat 43558032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 9235104 - 9235164
Alignment:
Q  194 ttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatca 254  Q
    ||||||| |||||  ||||||||||||||||| |||||| ||||| || ||||||| ||||    
T  9235104 ttaggtgttttgagcatgtagagagaagacttgtagattctgtagtaacgagagtagatca 9235164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 27998347 - 27998383
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactaga 110  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  27998347 gatgaggatgttgcgttggatgtgtggtaagactaga 27998383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 43558172 - 43558136
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactaga 110  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  43558172 gatgaggatgttgcgttggatgtgtggtaagactaga 43558136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 4e-16; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 281
Target Start/End: Complemental strand, 44146 - 44023
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagacttatagattttgtaggaaagagagtatatcaaat 257  Q
    ||||||||| |||||||||||||| |||||||||| ||||||||||||   ||||||||||||||| |  ||||| | ||| || ||||||| |  | ||    
T  44146 tagcacctatagtagaaaagatggcggaaaataggcttaggtggtttgggcatgtagagagaagaccttcagattctctagtaaggagagtagactagat 44047  T
Q  258 tgaggatagtctggtcactagagg 281  Q
     |||||||||| | ||||||||||    
T  44046 ggaggatagtcagatcactagagg 44023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 31399 - 31537
Alignment:
Q  81 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtagaaaagat 179  Q
    ||||||| ||||||| ||||||||||||||   |||| |||||| |||||||  |||||||||| | | ||||     ||||||||| |||||||||| |    
T  31399 atgttgcgttggatgagtggtaagactagacaggataagattaggaatgacaccattagagagagagtggggg-----tagcacctatagtagaaaagtt 31493  T
Q  180 ggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||| ||||||||| |||| |||||||   |||||||||||||||    
T  31494 ggtagaaaataggcttagatggtttgggcatgtagagagaagac 31537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 44229 - 44170
Alignment:
Q  74 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 133  Q
    |||||| ||||||| ||||||||| ||||||||||||||  |||| |||| |||||||||    
T  44229 gatgaggatgttgcgttggatgtgcggtaagactagatggtatagtattaaaaatgacaa 44170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 1226 - 1161
Alignment:
Q  158 tagcacctaaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagac 223  Q
    ||||||||| |||||||||| |||| ||||||||| |||| |||||||   |||||||||||||||    
T  1226 tagcacctatagtagaaaagttggtagaaaataggcttagatggtttggccatgtagagagaagac 1161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 25788 - 25684
Alignment:
Q  89 ttggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaa 187  Q
    ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | ||||     ||||||||| |||||||||| |||| ||||    
T  25788 ttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtggggg-----tagcacctatagtagaaaagttggtagaaa 25694  T
Q  188 ataggtttag 197  Q
    ||||| ||||    
T  25693 ataggcttag 25684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 1138 times since January 2019
Visitors: 1526