View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0151_1D_low_47 (Length: 235)
Name: NF0151_1D_low_47
Description: NF0151_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0151_1D_low_47 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 12 - 235
Target Start/End: Original strand, 48250660 - 48250884
Alignment:
| Q |
12 |
tgaagcagcaaaaatcagtgttccaaaacacatgacagtggataacaagcaaagggtggtttctctattttcctcaaacaaacaaaaacattgaatctta |
111 |
Q |
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| T |
48250660 |
tgaagcagcgaaaatcagtgttccaaaacacatgacagtggataacaagcaaagggtggtttctctattttcctcaaacaaacaaaaacattgaatctta |
48250759 |
T |
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| Q |
112 |
attcttaacatagg-aaaaaaggataacagtgaagaaaagtgagagacaatggcggttgcagcaagtgcaggcacagtgttagttcctcatcggctattg |
210 |
Q |
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| T |
48250760 |
attcttaacataggaaaaaaaggataacagtgaagaaaagtgagagacaatggcggttgcagcaagtgcaggcacagtgttagttcctcatcggctattg |
48250859 |
T |
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| Q |
211 |
acaaccaccaacgttactcgctgct |
235 |
Q |
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| T |
48250860 |
acaaccaccaacgttactcgctgct |
48250884 |
T |
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