View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0151_1D_low_47 (Length: 235)
Name: NF0151_1D_low_47
Description: NF0151_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0151_1D_low_47
[» ] chr7 (1 HSPs)
Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 12 - 235
Target Start/End: Original strand, 48250660 - 48250884
Alignment:
Q
12
tgaagcagcaaaaatcagtgttccaaaacacatgacagtggataacaagcaaagggtggtttctctattttcctcaaacaaacaaaaacattgaatctta
111
Q
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
48250660
tgaagcagcgaaaatcagtgttccaaaacacatgacagtggataacaagcaaagggtggtttctctattttcctcaaacaaacaaaaacattgaatctta
48250759
T
Q
112
attcttaacatagg-aaaaaaggataacagtgaagaaaagtgagagacaatggcggttgcagcaagtgcaggcacagtgttagttcctcatcggctattg
210
Q
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
48250760
attcttaacataggaaaaaaaggataacagtgaagaaaagtgagagacaatggcggttgcagcaagtgcaggcacagtgttagttcctcatcggctattg
48250859
T
Q
211
acaaccaccaacgttactcgctgct
235
Q
|||||||||||||||||||||||||
T
48250860
acaaccaccaacgttactcgctgct
48250884
T
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