View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0151_1D_low_50 (Length: 213)
Name: NF0151_1D_low_50
Description: NF0151_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0151_1D_low_50
[» ] chr6 (1 HSPs)
Alignment Details
Target: chr6 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 23 - 213
Target Start/End: Original strand, 32829278 - 32829469
Alignment:
Q
23
taagggacgaatttggcgcttggatt-gtggtgtggcttggagtatgggttgctgcttggtcctattgactgagatttggggtatcctaactattcttca
121
Q
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
T
32829278
taagggacgaatttggcgcttggatttgtggtgtggcttggagtatgggttgctgcttggtcctattgactgagatttagggtatcctaactattcttca
32829377
T
Q
122
aaaattggttgggagaaagattacaaatttgtttcgattgagtcggattcggcactagtaatttcgctacgaacaatgtgtgtcatcctcct
213
Q
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||
T
32829378
aaaattggttgggaaaaagattacaaatttgtttcgattgagtcggattcggcaccagtaatttcgctacgaacaatgtgtatcatcctcct
32829469
T
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