View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0152-INSERTION12 (Length: 457)
Name: NF0152-INSERTION12
Description: NF0152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0152-INSERTION12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 358; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 7 - 457
Target Start/End: Original strand, 46895221 - 46895685
Alignment:
| Q |
7 |
acgagaaacaagaacatataatcaattatatcaatccgatcgcaattcattaaaattaatagttgtgatatatttttaattaaaagacgtcggtgatcta |
106 |
Q |
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| T |
46895221 |
acgagaaacgagaacatataatcaattatatcaatccgatcgcaattcattaaaattaatagttgtgatatatttttaattaaaagacgtcggtgatcta |
46895320 |
T |
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| Q |
107 |
aaattaatggttttgttgagatctataccatccggtcttgattgaacggtcgca--------------gtgaatgtgttcagtcagtgacgatgtgaaat |
192 |
Q |
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| T |
46895321 |
aaattaatggttttgttgagatctacaccgtccgatcttgattgaacggtcacactgtcattgccgtcgtgaatgtgttcaggcagcgacgacgtgaaat |
46895420 |
T |
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| Q |
193 |
tttggtcaccatatagctctatgccactgtatcttagcttggatcggaatacgaaatgcttcttttcccccaagaatgtgtgatgatcctatccaatgtt |
292 |
Q |
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| T |
46895421 |
ttcggtcaccatatagctctatgccaccgtatcttagcttggatcggaatacgaaatgcttcttttcccccaagaacgtgtgatgatcctatccaatgtt |
46895520 |
T |
|
| Q |
293 |
gccctatctttctaacaaaatactacgttcttgaaaaacatctcttttctaacaatggtaacttgatcatctctatctacatgcctttcctcatcaccac |
392 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |
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| T |
46895521 |
gccctatctttctaacaaaatactacgttcttgaaaaacatctcttttctaacaatggtaacttgattatctctttctacatgcctttcctcatcaccac |
46895620 |
T |
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| Q |
393 |
cctatatatctctctttaaagatgctttgttcctaaaaatagtctatactatctattatctatat |
457 |
Q |
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| T |
46895621 |
cctatatatctctctttaaagatgctttgttcctaaaaatagtctatagtatctactatctatat |
46895685 |
T |
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