View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0154-Insertion-12 (Length: 483)
Name: NF0154-Insertion-12
Description: NF0154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0154-Insertion-12 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 476; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 8 - 483
Target Start/End: Complemental strand, 931839 - 931364
Alignment:
| Q |
8 |
tagtcaacatcactcataatagtaataatagacatgtgctatagttttaaatattaaactggccttgcctagtatagagtgaaagagtatctctccctct |
107 |
Q |
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| T |
931839 |
tagtcaacatcactcataatagtaataatagacatgtgctatagttttaaatattaaactggccttgcctagtatagagtgaaagagtatctctccctct |
931740 |
T |
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| Q |
108 |
gatgcactgacagaacatgatcataacaaagaatagaaagaattcccaaaatcttggggaaaacaactcccaaaatcagaggtatctcacaaaccaaaat |
207 |
Q |
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| T |
931739 |
gatgcactgacagaacatgatcataacaaagaatagaaagaattcccaaaatcttggggaaaacaactcccaaaatcagaggtatctcacaaaccaaaat |
931640 |
T |
|
| Q |
208 |
ataacgaactatatggaaaaaactgcagtcaagctaataaaacaactcaaagtgaaatataccttcgtcggactgattcatgccaatcatcacacattga |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
931639 |
ataacgaactatatggaaaaaactgcagtcaagctaataaaacaactcaaagtgaaatataccttcgtcggactgattcatgccaatcatcacacattga |
931540 |
T |
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| Q |
308 |
tgagaatgcactgtcagaagacatttgtgattcaacttctggatcaccgtaggaagcagttacagcattctccgagcctgaacctgtatcaccaaaggag |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
931539 |
tgagaatgcactgtcagaagacatttgtgattcaacttctggatcaccgtaggaagcagttacagcattctccgagcctgaacctgtatcaccaaaggag |
931440 |
T |
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| Q |
408 |
ctggcactctcagtgacatcatcctcaccgaaatctaacaccatcaaagctttgccagaatttttgcactcagtga |
483 |
Q |
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| T |
931439 |
ctggcactctcagtgacatcatcctcaccgaaatctaacaccatcaaagctttgccagaatttttgcactcagtga |
931364 |
T |
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