View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0154-Insertion-13 (Length: 367)
Name: NF0154-Insertion-13
Description: NF0154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0154-Insertion-13 |
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| [»] chr7 (1 HSPs) |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 341; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 7 - 367
Target Start/End: Complemental strand, 10483893 - 10483533
Alignment:
| Q |
7 |
aaatttaaaagaagcaacatcgttataatggaaacatgaaaatagtgtcatctcaatcatgaattttagaggaatcatcatctttgtgttgagatgtgtt |
106 |
Q |
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| T |
10483893 |
aaatttaaaagaagcaacatcgttataatggaaacatgaaaatagtgtcatctcaatcatgaattttagaggaatcatcatctttgtgttgagatgtgtt |
10483794 |
T |
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| Q |
107 |
gcatggaatttcacataaatcttccatgttgcaaggaaaagagttaccaatttgcatgtcagctaccatttggcgaagatcaaaagtttcttctttaagt |
206 |
Q |
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| T |
10483793 |
gcatggaatttcacataaatcttccatgttgcaaggaaaagagttaccaatttgcatgtcagctaccatttggcgaagatcaaaagtttcttccttaagt |
10483694 |
T |
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| Q |
207 |
cttgcattttcttgaacaactttgtcatgtgactcagacacatggtttagtttatcaacaaggttatgattttcagttctgagtctcaccacttgtgacc |
306 |
Q |
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| T |
10483693 |
cttgcattctcttgaacaactttgtcatgtgactcagacacatggtttagtttatcaacaaggttatgattttcagttctgagtctcaccacttgtgacc |
10483594 |
T |
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| Q |
307 |
aaagttcgtccaagtgtttttgtttcctcatccttgatctcctagctgattctctatttga |
367 |
Q |
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| T |
10483593 |
aaagttcatctaagtgcttttgtttcctcatccttgatctcctagctgattctctatttga |
10483533 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 57 - 367
Target Start/End: Original strand, 4951832 - 4952139
Alignment:
| Q |
57 |
tctcaatcatgaattttagaggaatcatcatctttgtgttgagatgtgttgcatggaatttcacataaatcttccatgttgcaaggaaaagagttaccaa |
156 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4951832 |
tctcaatcatgaattttagaggaatca---tctttgtgttgagatgtgttgcatggaatttcacataaatcttccatgttgcaaggaaaagagttaccaa |
4951928 |
T |
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| Q |
157 |
tttgcatgtcagctaccatttggcgaagatcaaaagtttcttctttaagtcttgcattttcttgaacaactttgtcatgtgactcagacacatggtttag |
256 |
Q |
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| T |
4951929 |
tttgcatgtcagctaccatttgacgaagatcaaaagtttcttctttaagtcgtgcattctcttgaacaactgtgtcatgtgactcagacacatggtttag |
4952028 |
T |
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| Q |
257 |
tttatcaacaaggttatgattttcagttctgagtctcaccacttgtgaccaaagttcgtccaagtgtttttgtttcctcatccttgatctcctagctgat |
356 |
Q |
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||| ||||||||||| |||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
4952029 |
tttgtcaacaaggttgtgattttcagttctgagtttcatcacttgtgaccaaagttcatccaagtgtttttgtttcctcatccttgatctcctagctgat |
4952128 |
T |
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| Q |
357 |
tctctatttga |
367 |
Q |
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||||| ||||| |
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| T |
4952129 |
tctctgtttga |
4952139 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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