View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0154-Insertion-14 (Length: 331)

Name: NF0154-Insertion-14
Description: NF0154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0154-Insertion-14
NF0154-Insertion-14
[»] chr4 (42 HSPs)
chr4 (158-331)||(43143592-43143769)
chr4 (162-328)||(42333787-42333957)
chr4 (159-327)||(3292908-3293080)
chr4 (159-327)||(6690247-6690419)
chr4 (159-327)||(30216754-30216926)
chr4 (159-321)||(10352902-10353068)
chr4 (159-327)||(50205089-50205261)
chr4 (158-327)||(20129292-20129465)
chr4 (158-327)||(25930690-25930863)
chr4 (159-331)||(28877258-28877434)
chr4 (159-327)||(48989311-48989483)
chr4 (202-327)||(44156681-44156806)
chr4 (176-327)||(36382358-36382512)
chr4 (158-327)||(26439291-26439464)
chr4 (158-327)||(34407296-34407469)
chr4 (201-331)||(35545982-35546112)
chr4 (159-327)||(29995995-29996167)
chr4 (158-327)||(13012170-13012343)
chr4 (158-327)||(43355886-43356059)
chr4 (158-327)||(47500755-47500928)
chr4 (159-326)||(26448036-26448206)
chr4 (201-327)||(29319717-29319843)
chr4 (201-320)||(17511252-17511372)
chr4 (159-321)||(30077649-30077814)
chr4 (227-327)||(6235575-6235675)
chr4 (207-326)||(1817752-1817871)
chr4 (201-327)||(40529044-40529170)
chr4 (250-327)||(13392893-13392970)
chr4 (250-327)||(13396032-13396109)
chr4 (165-298)||(30109945-30110084)
chr4 (201-298)||(48129995-48130087)
chr4 (159-272)||(45194159-45194276)
chr4 (201-265)||(6254573-6254637)
chr4 (159-257)||(27363344-27363446)
chr4 (158-205)||(7769310-7769357)
chr4 (159-205)||(49908790-49908836)
chr4 (159-205)||(5517502-5517548)
chr4 (159-205)||(6212036-6212082)
chr4 (159-205)||(17554979-17555025)
chr4 (160-202)||(50720487-50720529)
chr4 (159-202)||(13393011-13393054)
chr4 (159-202)||(13396150-13396193)
[»] chr8 (16 HSPs)
chr8 (158-331)||(34136833-34137010)
chr8 (162-331)||(4403994-4404167)
chr8 (159-327)||(23402091-23402263)
chr8 (174-327)||(16788037-16788194)
chr8 (203-326)||(9877251-9877374)
chr8 (176-327)||(15838286-15838440)
chr8 (163-326)||(36408538-36408705)
chr8 (159-327)||(29728398-29728570)
chr8 (201-327)||(3648806-3648932)
chr8 (159-330)||(2729205-2729380)
chr8 (177-327)||(39914516-39914669)
chr8 (204-327)||(42230971-42231092)
chr8 (201-298)||(3435298-3435397)
chr8 (201-265)||(40470567-40470631)
chr8 (163-257)||(10397122-10397220)
chr8 (247-306)||(376459-376519)
[»] chr3 (19 HSPs)
chr3 (158-327)||(11018224-11018397)
chr3 (159-327)||(45182964-45183136)
chr3 (158-331)||(6503577-6503754)
chr3 (159-327)||(6930906-6931078)
chr3 (159-327)||(33040936-33041108)
chr3 (159-321)||(19565519-19565685)
chr3 (176-327)||(19390146-19390301)
chr3 (176-331)||(34084130-34084289)
chr3 (159-321)||(45335858-45336023)
chr3 (201-327)||(6269438-6269564)
chr3 (158-327)||(27935160-27935333)
chr3 (158-327)||(39771772-39771945)
chr3 (177-327)||(22968456-22968610)
chr3 (159-327)||(35514249-35514417)
chr3 (201-327)||(40081753-40081877)
chr3 (201-298)||(5135298-5135397)
chr3 (159-205)||(5354692-5354738)
chr3 (159-205)||(6890981-6891027)
chr3 (160-229)||(22922141-22922214)
[»] chr6 (13 HSPs)
chr6 (159-327)||(28996713-28996885)
chr6 (176-327)||(18339106-18339261)
chr6 (159-321)||(29743266-29743432)
chr6 (158-327)||(34948770-34948943)
chr6 (158-327)||(398599-398772)
chr6 (158-327)||(13837803-13837976)
chr6 (201-326)||(33229349-33229474)
chr6 (160-257)||(24697899-24698000)
chr6 (162-268)||(31028435-31028545)
chr6 (159-205)||(13647000-13647046)
chr6 (159-205)||(34385526-34385572)
chr6 (201-257)||(24695516-24695572)
chr6 (162-202)||(2753336-2753376)
[»] chr7 (18 HSPs)
chr7 (158-320)||(34389075-34389241)
chr7 (159-327)||(37002156-37002328)
chr7 (159-327)||(26624728-26624901)
chr7 (185-327)||(35090177-35090323)
chr7 (203-327)||(38638248-38638372)
chr7 (159-327)||(8867743-8867915)
chr7 (158-327)||(5555469-5555642)
chr7 (159-327)||(43184480-43184652)
chr7 (158-327)||(3114108-3114281)
chr7 (159-327)||(33685547-33685719)
chr7 (176-327)||(8394125-8394280)
chr7 (176-327)||(36630816-36630971)
chr7 (177-327)||(14777119-14777273)
chr7 (159-327)||(7002708-7002880)
chr7 (159-327)||(7048579-7048751)
chr7 (201-327)||(40920015-40920141)
chr7 (201-327)||(36658210-36658336)
chr7 (239-298)||(10868514-10868575)
[»] chr5 (21 HSPs)
chr5 (158-320)||(37254623-37254789)
chr5 (159-327)||(12278872-12279044)
chr5 (159-327)||(17332563-17332735)
chr5 (159-327)||(31680350-31680522)
chr5 (159-329)||(31501726-31501900)
chr5 (201-327)||(33430350-33430476)
chr5 (159-327)||(10033910-10034082)
chr5 (159-327)||(13817960-13818132)
chr5 (202-327)||(16333888-16334013)
chr5 (158-327)||(26283330-26283503)
chr5 (203-327)||(39657518-39657642)
chr5 (178-321)||(1776394-1776541)
chr5 (201-327)||(16155026-16155152)
chr5 (158-321)||(36293639-36293806)
chr5 (158-327)||(39434678-39434851)
chr5 (176-321)||(3155649-3155798)
chr5 (204-326)||(43068909-43069031)
chr5 (201-327)||(19985968-19986094)
chr5 (159-327)||(36291354-36291526)
chr5 (201-298)||(28801316-28801415)
chr5 (159-205)||(26543903-26543949)
[»] chr2 (22 HSPs)
chr2 (159-327)||(45418566-45418738)
chr2 (159-327)||(8147334-8147507)
chr2 (159-327)||(44084615-44084787)
chr2 (159-327)||(8059345-8059517)
chr2 (151-327)||(42439961-42440141)
chr2 (179-327)||(41251646-41251798)
chr2 (159-320)||(770977-771147)
chr2 (201-327)||(12756849-12756975)
chr2 (158-327)||(6403816-6403989)
chr2 (158-327)||(35962697-35962870)
chr2 (182-321)||(18981622-18981765)
chr2 (176-327)||(31581634-31581789)
chr2 (176-327)||(32127153-32127308)
chr2 (158-327)||(17445053-17445224)
chr2 (179-327)||(16405603-16405755)
chr2 (158-309)||(2958131-2958285)
chr2 (201-327)||(2285891-2286017)
chr2 (201-320)||(26162721-26162837)
chr2 (174-286)||(26237955-26238071)
chr2 (201-298)||(4555250-4555349)
chr2 (185-298)||(7072589-7072710)
chr2 (159-205)||(34523223-34523269)
[»] chr1 (16 HSPs)
chr1 (158-320)||(35907534-35907700)
chr1 (159-320)||(17445296-17445461)
chr1 (8-155)||(34502560-34502710)
chr1 (158-327)||(7433427-7433600)
chr1 (158-327)||(26144237-26144410)
chr1 (159-327)||(3828967-3829138)
chr1 (159-320)||(321396-321561)
chr1 (176-319)||(32982076-32982223)
chr1 (159-316)||(42310964-42311125)
chr1 (159-298)||(41972314-41972458)
chr1 (159-298)||(33489670-33489815)
chr1 (158-278)||(23313220-23313345)
chr1 (75-151)||(34513320-34513396)
chr1 (159-205)||(44352621-44352667)
chr1 (159-204)||(31866960-31867005)
chr1 (8-42)||(34513243-34513277)
[»] scaffold0502 (1 HSPs)
scaffold0502 (176-327)||(5230-5385)
[»] scaffold0154 (1 HSPs)
scaffold0154 (159-327)||(31463-31635)
[»] scaffold0041 (1 HSPs)
scaffold0041 (201-327)||(52954-53080)
[»] scaffold0069 (1 HSPs)
scaffold0069 (158-327)||(17824-17997)
[»] scaffold0002 (1 HSPs)
scaffold0002 (158-327)||(480469-480642)
[»] scaffold2142 (1 HSPs)
scaffold2142 (158-327)||(504-677)
[»] scaffold0769 (1 HSPs)
scaffold0769 (159-205)||(1260-1306)
[»] scaffold0012 (1 HSPs)
scaffold0012 (169-205)||(194021-194057)


Alignment Details
Target: chr4 (Bit Score: 153; Significance: 5e-81; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 43143769 - 43143592
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  43143769 tgggcggtttcaccgtccgacgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttaca 43143670  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatggg 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43143669 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatggg 43143592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 162 - 328
Target Start/End: Complemental strand, 42333957 - 42333787
Alignment:
Q  162 cggtttcaccgtccggcgaccccgggcggtcgcccgggctc----gataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaa 257  Q
    |||||||||||||| |||| |||||||||||| ||||||||    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42333957 cggtttcaccgtccagcgatcccgggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaa 42333858  T
Q  258 gaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgat 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42333857 gaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgat 42333787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 159 - 327
Target Start/End: Complemental strand, 3293080 - 3292908
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| || | |||||||||||||||||||||||||||    ||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  3293080 gggcggtttcaccgcccagtgaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacacttacaa 3292981  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3292980 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 3292908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 159 - 327
Target Start/End: Complemental strand, 6690419 - 6690247
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    ||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  6690419 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaa 6690320  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  6690319 aaagaaaaatttgggcaaactgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 6690247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 159 - 327
Target Start/End: Complemental strand, 30216926 - 30216754
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||||||  |||||||||||||||||    
T  30216926 gggcggattcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaa 30216827  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||    
T  30216826 aaagaaaaatttgggcaatctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattga 30216754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 159 - 321
Target Start/End: Complemental strand, 10353068 - 10352902
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctc----gataatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||||||||||||||| |||||||||||||||||    ||||||||||||||||||||| ||||| ||||||| ||||||||| ||||||    
T  10353068 gggcggtttcaccgtccggcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacatttacaa 10352969  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 321  Q
    || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10352968 aaggaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacac 10352902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 159 - 327
Target Start/End: Complemental strand, 50205261 - 50205089
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||    |||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  50205261 gggcggtttcaccgtccggcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacacttacaa 50205162  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  50205161 aaagaaaaaattggacaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattga 50205089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 158 - 327
Target Start/End: Original strand, 20129292 - 20129465
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    ||||||||| ||||||   ||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| | ||||||||| |||||    
T  20129292 tgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttaca 20129391  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||  ||||||||||| |||||| |||||    
T  20129392 aaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttagaattttatttggcacactattga 20129465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 158 - 327
Target Start/End: Original strand, 25930690 - 25930863
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    |||||||||  |||||  |||||||| |||||||||||||||||||||    ||||||||||||||| |||||||||||||| | ||||||||| |||||    
T  25930690 tgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacatttaca 25930789  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||| |||||    
T  25930790 aaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattga 25930863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 159 - 331
Target Start/End: Complemental strand, 28877434 - 28877258
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggct----cgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    ||||||||||||||||||  ||||||| ||||||||  |||||    ||||||||||||||||||||| |||||| |||||  ||||||||| |||| ||    
T  28877434 gggcggtttcaccgtccgatgaccccgtgcggtcgcttgggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgcttataa 28877335  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatggg 331  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28877334 aaagaaaaatttgggaaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgatggg 28877258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 159 - 327
Target Start/End: Original strand, 48989311 - 48989483
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||| ||||||||| ||| |||| ||||||||||  ||||| ||||    |||||||||||||||| || |||| |||||||| ||||||||||||||||    
T  48989311 gggcagtttcaccgcccgacgactccgggcggtcaaccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaa 48989410  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  48989411 aaagaaaaatttgggcaatctgaaaattctcatacgcaaataggtctcggaattttatttagcacactattga 48989483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 202 - 327
Target Start/End: Original strand, 44156681 - 44156806
Alignment:
Q  202 cgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtct 301  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||    
T  44156681 cgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctcacgcaaataggtct 44156780  T
Q  302 cggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||| |||||    
T  44156781 cggaattttatttagcacactattga 44156806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 176 - 327
Target Start/End: Complemental strand, 36382512 - 36382358
Alignment:
Q  176 ggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 271  Q
    ||||||||||||||||||||||||||||||    ||||||||||||||| |||||||| ||||||| ||||||||| |||||||| ||||||||||| ||    
T  36382512 ggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttggaca 36382414  T
Q  272 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||    
T  36382413 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattga 36382358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 158 - 327
Target Start/End: Complemental strand, 26439464 - 26439291
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcg----ataatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    ||||||||| ||||||   |||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||| | ||||||||| ||| |    
T  26439464 tgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttata 26439365  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||||||||  ||||| |||||    
T  26439364 aaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattga 26439291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 158 - 327
Target Start/End: Complemental strand, 34407469 - 34407296
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcg----ataatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    ||||||||| ||||||   |||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||| | ||||||||| ||| |    
T  34407469 tgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttata 34407370  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||||||||  ||||| |||||    
T  34407369 aaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattga 34407296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 201 - 331
Target Start/End: Original strand, 35545982 - 35546112
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 300  Q
    |||| ||||||||| ||| |||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  35545982 tcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaatgggtc 35546081  T
Q  301 tcggaattttatttagcacacaattgatggg 331  Q
    || |||||||||||||||||| |||||||||    
T  35546082 tctgaattttatttagcacactattgatggg 35546112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 159 - 327
Target Start/End: Complemental strand, 29996167 - 29995995
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| ||| ||| ||||| |||||| |||| ||||||    |||||||| ||||||||||||||| ||||||| ||||||||| |||| |    
T  29996167 gggcggtttcaccgcccgacgatcccggacggtcgtccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacga 29996068  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||| ||||||| |||||    
T  29996067 aaagaaaaatttgggcaatctgaaaattcttgcacgcaaatagttctcggaattttattaagcacactattga 29995995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 158 - 327
Target Start/End: Original strand, 13012170 - 13012343
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    ||||||||| ||||||   ||||||||||||||||||||||||||||    |||||||||||||||||| |||||| |||||   ||||||||| ||| |    
T  13012170 tgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacatttata 13012269  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  13012270 aaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 13012343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 158 - 327
Target Start/End: Original strand, 43355886 - 43356059
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcg----ataatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    ||||||||| ||||||   |||||||| ||| ||||||||||||||    |||||||||||||||||||||||||||||||| | ||||||||| ||| |    
T  43355886 tgggcggttccaccgtgtagcgaccccaggcagtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttata 43355985  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||||||||  ||||| |||||    
T  43355986 aaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattga 43356059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 158 - 327
Target Start/End: Original strand, 47500755 - 47500928
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    ||||||||| ||||||   ||||||||||||||||||||||||||||    ||||||||||||||||||||||||| |||||   ||||||||| |||      
T  47500755 tgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttatg 47500854  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  47500855 aaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 47500928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 159 - 326
Target Start/End: Original strand, 26448036 - 26448206
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| |||||||| ||| ||| ||| |||| ||||||    ||||||||||||||| |   |||||||||||| ||||||||||||||||    
T  26448036 gggcggtttcaccgcccggcgactccgtgcgatcgtccggactcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttacaa 26448135  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattg 326  Q
    ||| |||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| ||||    
T  26448136 aaa-aaaaatttgggcaatctgaaaattctcatacacaaataggtttcggaattttatttagcacactattg 26448206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 201 - 327
Target Start/End: Complemental strand, 29319843 - 29319717
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 300  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||| ||||||||||||||||||| |||||||||||||| |||||| |||||| |||    
T  29319843 tcgataatttttgcacattagactcaacccaaaatcccattaacacatttacaaaaagaaaaatttgagcaatctgaaaattgtcacacacaaataagtc 29319744  T
Q  301 tcggaattttatttagcacacaattga 327  Q
    | ||||||||||||||||||| |||||    
T  29319743 ttggaattttatttagcacactattga 29319717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 201 - 320
Target Start/End: Complemental strand, 17511372 - 17511252
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 300  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||| |||||||| | |||||||||||||||    
T  17511372 tcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgttacacgcaaataggtc 17511273  T
Q  301 tcgg-aattttatttagcaca 320  Q
    | || ||||||||||||||||    
T  17511272 ttggaaattttatttagcaca 17511252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 159 - 321
Target Start/End: Complemental strand, 30077814 - 30077649
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctc----gataatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| ||| ||||| ||||||||||||| |||||    ||||| ||||||||||||||| ||||| ||||||  ||||||||| ||||||    
T  30077814 gggcggtttcaccgcccg-cgacctcgggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacatttacaa 30077716  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 321  Q
    |||||||||||||| ||||||||||||| | |||| ||||||||||| | |||||||||||||||||    
T  30077715 aaagaaaaatttggacaatctgaaaatttttacacacaaataggtcttgaaattttatttagcacac 30077649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 227 - 327
Target Start/End: Original strand, 6235575 - 6235675
Alignment:
Q  227 acccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattg 326  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||| ||||    
T  6235575 acccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattg 6235674  T
Q  327 a 327  Q
    |    
T  6235675 a 6235675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 207 - 326
Target Start/End: Original strand, 1817752 - 1817871
Alignment:
Q  207 atttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaa 306  Q
    ||||||||||||||||  ||| ||||||||| ||||| ||| ||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  1817752 atttttgcacattagatccaatccaaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaataggtctcggaa 1817851  T
Q  307 ttttatttagcacacaattg 326  Q
    ||||||||| ||||| ||||    
T  1817852 ttttatttaacacactattg 1817871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 40529044 - 40529170
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 300  Q
    |||||||||||||||||||| |||||||| ||||    ||||||||| |||||||||||||||||||| |||| |||||||| ||||| |||||||||||    
T  40529044 tcgataatttttgcacattaaactcaacctaaaaactcattaacacatttacaaaaagaaaaatttggacaatttgaaaattgtcacatgcaaataggtc 40529143  T
Q  301 tcggaattttatttagcacacaattga 327  Q
    | ||||||||||||||||||| |||||    
T  40529144 ttggaattttatttagcacactattga 40529170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 250 - 327
Target Start/End: Complemental strand, 13392970 - 13392893
Alignment:
Q  250 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  13392970 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13392893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 250 - 327
Target Start/End: Complemental strand, 13396109 - 13396032
Alignment:
Q  250 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  13396109 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13396032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 165 - 298
Target Start/End: Original strand, 30109945 - 30110084
Alignment:
Q  165 tttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaa 260  Q
    |||||||| ||| ||||||||| ||||||||||| |||||    ||||||||||||||||||| ||| || |||| | ||||||||||||||||||||||    
T  30109945 tttcaccgcccgacgaccccggacggtcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaa 30110044  T
Q  261 aaatttgggc--aatctgaaaattctcacacgcaaatagg 298  Q
    |||||||| |  ||| |||||| |||||||||||||||||    
T  30110045 aaatttggacaaaatatgaaaaatctcacacgcaaatagg 30110084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 298
Target Start/End: Original strand, 48129995 - 48130087
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaatagg 298  Q
    ||||||||||||||| ||||||| |||||||||||   |||||||||||||||||||||||||||||||     |||||| |||||||||||||||||    
T  48129995 tcgataatttttgcatattagacccaacccaaaagctcattaacacacttacaaaaagaaaaatttggg-----tgaaaactctcacacgcaaatagg 48130087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 272
Target Start/End: Original strand, 45194159 - 45194276
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||| ||||||||| ||| ||||||| |||| | |||||| ||||||    ||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  45194159 gggcagtttcaccgcccgacgaccccaggcgattgcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttacaa 45194258  T
Q  255 aaagaaaaatttgggcaa 272  Q
    ||| ||||  ||||||||    
T  45194259 aaaaaaaatattgggcaa 45194276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 6254573 - 6254637
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatt 265  Q
    |||||||||||||||||||| || ||||||||||| |||||||||||||| |||||| |||||||    
T  6254573 tcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 257
Target Start/End: Original strand, 27363344 - 27363446
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat--aa--tttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    ||||||||| |||||  ||||||| ||||||||||||||||||||||  ||  |||||||| ||||| | ||||||||||| | ||||||||||||||||    
T  27363344 gggcggttttaccgtatggcgacctcgggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacacttacaa 27363443  T
Q  255 aaa 257  Q
    |||    
T  27363444 aaa 27363446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 7769310 - 7769357
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat 205  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7769310 tgggcggtttcaccgtccggcgaccccaggcggtcgcccgggctcgat 7769357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 49908836 - 49908790
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat 205  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  49908836 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgat 49908790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 5517548 - 5517502
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat 205  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||    
T  5517548 gggcggtttcaccgcccggcgaccccgggcggtcgcctgggctcgat 5517502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 6212082 - 6212036
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat 205  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||    
T  6212082 gggcggtttcaccgtccggcgacctcgggcggtcgcccgagctcgat 6212036  T

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Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 17554979 - 17555025
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat 205  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||    
T  17554979 gggcggtttcaccgtccgacgaccccgggtggtcgcccgggctcgat 17555025  T

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Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 202
Target Start/End: Complemental strand, 50720529 - 50720487
Alignment:
Q  160 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctc 202  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  50720529 ggcggtttcaccgcccggcgacctcgggcggtcgcccgggctc 50720487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 13393054 - 13393011
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctc 202  Q
    |||||||||||||| || |||||||||| |||||||||||||||    
T  13393054 gggcggtttcaccgcccagcgaccccggacggtcgcccgggctc 13393011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 13396193 - 13396150
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctc 202  Q
    |||||||||||||| || |||||||||| |||||||||||||||    
T  13396193 gggcggtttcaccgcccagcgaccccggacggtcgcccgggctc 13396150  T

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Target: chr8 (Bit Score: 145; Significance: 3e-76; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 34137010 - 34136833
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    |||| |||||||||||| |||||||||| |||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34137010 tgggtggtttcaccgtctggcgaccccgagcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacacttaca 34136911  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatggg 331  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34136910 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttagcacacaattgatggg 34136833  T

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Target: chr8; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 162 - 331
Target Start/End: Original strand, 4403994 - 4404167
Alignment:
Q  162 cggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaa 257  Q
    ||||||||| | ||||||||||| |||||||||||||||||||    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  4403994 cggtttcactggccggcgaccccaggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatacttacaaaaa 4404093  T
Q  258 gaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatggg 331  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4404094 gaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatggg 4404167  T

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Target: chr8; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 159 - 327
Target Start/End: Original strand, 23402091 - 23402263
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    ||| |||||| ||||||| ||||||||||| ||||||||||||||||||    
T  23402091 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacacttacaa 23402190  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||    
T  23402191 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattga 23402263  T

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Target: chr8; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 174 - 327
Target Start/End: Complemental strand, 16788194 - 16788037
Alignment:
Q  174 ccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttggg 269  Q
    ||||| ||||||||||||||||||||||||||    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16788194 ccggcaaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttggg 16788095  T
Q  270 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||| |||| |||||||||||||||||||| ||||||||||||||||||| |||||    
T  16788094 caatcttaaaactctcacacgcaaataggtcttggaattttatttagcacactattga 16788037  T

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Target: chr8; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 203 - 326
Target Start/End: Original strand, 9877251 - 9877374
Alignment:
Q  203 gataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctc 302  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9877251 gataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaaataggtctc 9877350  T
Q  303 ggaattttatttagcacacaattg 326  Q
    | ||||||||||||||||| ||||    
T  9877351 gaaattttatttagcacactattg 9877374  T

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Target: chr8; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 176 - 327
Target Start/End: Original strand, 15838286 - 15838440
Alignment:
Q  176 ggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 271  Q
    ||||||||||||||||| ||||||||||||    ||||||||||||||| |||||||| ||||||| ||||||||| |||||||| ||||||||||||||    
T  15838286 ggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttgggca 15838384  T
Q  272 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||    
T  15838385 atctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattga 15838440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 163 - 326
Target Start/End: Original strand, 36408538 - 36408705
Alignment:
Q  163 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaag 258  Q
    |||||||||| ||||||||| |||||||||||||||||||||    ||||||||||||||||||  ||||||||||||| ||||||||| ||||||||||    
T  36408538 ggtttcaccgcccggcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacatttacaaaaag 36408637  T
Q  259 aaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattg 326  Q
    |||| ||| |||||| |||||||||| |||||| |||||||||| |||||||||||| ||||| ||||    
T  36408638 aaaatttttggcaatttgaaaattcttacacgctaataggtctcagaattttatttaacacactattg 36408705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 159 - 327
Target Start/End: Complemental strand, 29728570 - 29728398
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    ||||||||  |||||  ||||||||||| |||||||||| |||||||    || |||||||||||||||||||||||||||   ||||||||| ||||||    
T  29728570 gggcggttctaccgtatggcgaccccggacggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttacaa 29728471  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||  |||||||||||||||||| |||||    
T  29728470 aaagaaaaatttgggcaatctgaaaattgtgacacgcaaataggtcttcgaattttatttagcacactattga 29728398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 201 - 327
Target Start/End: Complemental strand, 3648932 - 3648806
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 300  Q
    |||||||||||| |||||||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| |||||     
T  3648932 tcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatctgaaaattgtcacacgcaagtaggtt 3648833  T
Q  301 tcggaattttatttagcacacaattga 327  Q
    | ||||||||||||||||||| |||||    
T  3648832 ttggaattttatttagcacactattga 3648806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 159 - 330
Target Start/End: Complemental strand, 2729380 - 2729205
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||    ||||||| ||||||| |  ||| ||||||| | ||||||||||||| ||    
T  2729380 gggcggtttcaccgcccggcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttataa 2729281  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgg 330  Q
    |||||||  ||| |||||| |||||| ||||| |||||||||||||||  ||||||||||||||||| ||||||||    
T  2729280 aaagaaattttttggcaatttgaaaactctcatacgcaaataggtctcaaaattttatttagcacactattgatgg 2729205  T

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Target: chr8; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 177 - 327
Target Start/End: Original strand, 39914516 - 39914669
Alignment:
Q  177 gcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 272  Q
    |||||||||||||||||||||||||||||    |||||||||||||||||||||||| |||||   ||||||||| ||| ||||| ||||||||||||||    
T  39914516 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaa-aaaaatttgggcaa 39914614  T
Q  273 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    | |||||||| ||||| | |||||||||| |||||||||||| |||||| |||||    
T  39914615 tttgaaaattgtcacaagtaaataggtcttggaattttatttggcacactattga 39914669  T

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Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 204 - 327
Target Start/End: Original strand, 42230971 - 42231092
Alignment:
Q  204 ataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcg 303  Q
    ||||||||||||||||| |  |||| |||||||| ||||||||  ||||||||||||||||||||||||| |||||||||||| | |||||||||||||     
T  42230971 ataatttttgcacattaaatccaactcaaaagtccattaacac--ttacaaaaagaaaaatttgggcaatttgaaaattctcatatgcaaataggtctca 42231068  T
Q  304 gaattttatttagcacacaattga 327  Q
    |||||||||||||||||| |||||    
T  42231069 gaattttatttagcacactattga 42231092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 201 - 298
Target Start/End: Original strand, 3435298 - 3435397
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggc--aatctgaaaattctcacacgcaaatagg 298  Q
    ||||||||||||||||||||||| ||||||||||  | ||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  3435298 tcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaattctcaaacgcaaatagg 3435397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 40470631 - 40470567
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatt 265  Q
    ||||||||||||||||||||||| |||  |||||||| ||||||||||||| ||||| |||||||    
T  40470631 tcgataatttttgcacattagacccaaatcaaaagtccattaacacacttataaaaaaaaaaatt 40470567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 257
Target Start/End: Complemental strand, 10397220 - 10397122
Alignment:
Q  163 ggtttcaccgtccggcgaccccgggcggtcgcccgggctc----gataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaa 257  Q
    |||| ||||| |||||||| ||||||  ||||||||||||    |||||||| | ||||||||  |||||||||||| | ||||||||| ||| |||||    
T  10397220 ggttacaccgcccggcgactccgggcactcgcccgggctcaatcgataatttcttcacattaggttcaacccaaaagccgattaacacagttaaaaaaa 10397122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 306
Target Start/End: Original strand, 376459 - 376519
Alignment:
Q  247 acttacaaaaagaaaaatt-tgggcaatctgaaaattctcacacgcaaataggtctcggaa 306  Q
    ||||| ||||| ||||||| || | ||| |||||||||||||||||||| |||||||||||    
T  376459 acttaaaaaaaaaaaaattgtgcgaaatatgaaaattctcacacgcaaagaggtctcggaa 376519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 141; Significance: 7e-74; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 158 - 327
Target Start/End: Complemental strand, 11018397 - 11018224
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  11018397 tgggcggtttcaccgtccggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttaca 11018298  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11018297 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattga 11018224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 159 - 327
Target Start/End: Original strand, 45182964 - 45183136
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    |||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  45182964 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaa 45183063  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  45183064 aaagaaaaatttgggcaatctgaaaattctcacacacaaataggtctcggaattttatttagcacactattga 45183136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 158 - 331
Target Start/End: Complemental strand, 6503754 - 6503577
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgata----atttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||| ||||||||||||||||||| |||||| ||||||||||    
T  6503754 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacacttaca 6503655  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatggg 331  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  6503654 aaaagaaaaatttaagcaatctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattgatggg 6503577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 159 - 327
Target Start/End: Complemental strand, 6931078 - 6930906
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||    ||||||||| |||||||  ||||||||||| ||||||||||| ||||||    
T  6931078 gggcggtttcaccgcccggcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatttacaa 6930979  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6930978 aaagaaaaatttaggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 6930906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 159 - 327
Target Start/End: Original strand, 33040936 - 33041108
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||    |||||||||| ||||||| |||||||||||  |||||||||||||||||    
T  33040936 gggcggtttcaccgcccggcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttacaa 33041035  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||  |||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  33041036 aaagaaaaatttgaacaatttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattga 33041108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 159 - 321
Target Start/End: Complemental strand, 19565685 - 19565519
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccggg----ctcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| ||||||| ||||||||||||||||||     ||||||||||||||||||||||| ||||| |||| || ||||||||| ||||||    
T  19565685 gggcggtttcaccgcccggcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacatttacaa 19565586  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 321  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19565585 aaagaaaaatttggacaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacac 19565519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 176 - 327
Target Start/End: Original strand, 19390146 - 19390301
Alignment:
Q  176 ggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 271  Q
    |||||||||||||||||| ||||| ||||    ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  19390146 ggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacatttacaaaaagaaaaatttgggca 19390245  T
Q  272 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  19390246 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 19390301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 176 - 331
Target Start/End: Complemental strand, 34084289 - 34084130
Alignment:
Q  176 ggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 271  Q
    ||||||||||||||||||||||| ||||||    ||||||||||||||| | |||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  34084289 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggca 34084190  T
Q  272 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatggg 331  Q
    || |||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  34084189 atatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattgatggg 34084130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 159 - 321
Target Start/End: Original strand, 45335858 - 45336023
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctc----gataatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| ||||||||| ||||||||||||||| |||    |||||||||| |||||||||| ||||| |||||||| |||||||| ||||||    
T  45335858 gggcggtttcaccgcccggcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtca-ttaacacatttacaa 45335956  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 321  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  45335957 aaagaaaaatctgggcaatctgaaaattcttacacgcaaataggtcttggaattttatttagcacac 45336023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 201 - 327
Target Start/End: Complemental strand, 6269564 - 6269438
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 300  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  6269564 tcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtc 6269465  T
Q  301 tcggaattttatttagcacacaattga 327  Q
    | ||||||||||||||||||| |||||    
T  6269464 ttggaattttatttagcacactattga 6269438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 158 - 327
Target Start/End: Original strand, 27935160 - 27935333
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    |||| |||||||||| | ||| |||| |||| |||||||||||||||    |||||||||||||||| || |||||||||||   |||||||||||||||    
T  27935160 tgggtggtttcaccgcctggcaaccctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacacttaca 27935259  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| || |||||    
T  27935260 aaaagaaaaatttgggcaatctgaaaattctcatacgaaaataggtctcggaattttatttagcatactattga 27935333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 158 - 327
Target Start/End: Original strand, 39771772 - 39771945
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcg----ataatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    ||||||||| ||||||   |||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||| | ||||||||| ||| |    
T  39771772 tgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttata 39771871  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||||||||  ||||| |||||    
T  39771872 aaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattga 39771945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 177 - 327
Target Start/End: Complemental strand, 22968610 - 22968456
Alignment:
Q  177 gcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 272  Q
    ||||||||||||||||| |||||||||||    ||||||||||||||||||| |||||||||| | ||||||||| ||||||||||||||||||||||||    
T  22968610 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 22968511  T
Q  273 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||| |||||| ||||||| |||||||||| | ||||||||||||||||| |||||    
T  22968510 tctaaaaattgtcacacgtaaataggtcttgaaattttatttagcacactattga 22968456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 159 - 327
Target Start/End: Original strand, 35514249 - 35514417
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||| ||||||||| ||||||||||||| |||||| |||||||||||    |||||| ||| | ||||  ||||||||||||| ||||||||||    ||    
T  35514249 gggcagtttcaccgcccggcgaccccggacggtcgtccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacacac----aa 35514344  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||| |||||||||||| |||||| |||||    
T  35514345 aaagaaaaatttggacaatatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattga 35514417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 201 - 327
Target Start/End: Complemental strand, 40081877 - 40081753
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 300  Q
    ||||||||||||| ||||||||||||||| |||  ||| |||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||| ||    
T  40081877 tcgataatttttgaacattagactcaaccaaaagctca-ttaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaatagatc 40081779  T
Q  301 tcggaattttatttagcacacaattga 327  Q
    | || ||||| |||||||||| |||||    
T  40081778 ttgg-attttttttagcacactattga 40081753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 298
Target Start/End: Original strand, 5135298 - 5135397
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggc--aatctgaaaattctcacacgcaaatagg 298  Q
    ||||| ||||||| ||||||||| ||||| |||||   |||||||||||||||||||||||||||||| |  |||| |||||||||||||| ||||||||    
T  5135298 tcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttggacaaaatccgaaaattctcacacacaaatagg 5135397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 5354692 - 5354738
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat 205  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  5354692 gggcagtttcaccgcccggcgaccccgggcggtcgcccgggctcgat 5354738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 6890981 - 6891027
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat 205  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||    
T  6890981 gggcggtttcaccgcccggcgacaccgggcggtcgcccgggctcgat 6891027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 22922141 - 22922214
Alignment:
Q  160 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgata----atttttgcacattagactcaacc 229  Q
    ||||||| ||||||  ||||| ||||||||||||| ||||||||||     |||||||||||||| ||||||||    
T  22922141 ggcggttccaccgtatggcgatcccgggcggtcgctcgggctcgatcgatcatttttgcacattaaactcaacc 22922214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 132; Significance: 2e-68; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 159 - 327
Target Start/End: Original strand, 28996713 - 28996885
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||    |||||||||| |||||||| ||||| ||||||||||||||||||||||||    
T  28996713 gggcggtttcaccgcccggcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacacttacaa 28996812  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28996813 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 28996885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 176 - 327
Target Start/End: Original strand, 18339106 - 18339261
Alignment:
Q  176 ggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 271  Q
    ||||||||||||||||||||||||||||||    |||||||||||||||||| ||| | ||||| |||||||||||||||||||||||||| ||||||||    
T  18339106 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 18339205  T
Q  272 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  18339206 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattga 18339261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 159 - 321
Target Start/End: Original strand, 29743266 - 29743432
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctc----gataatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||    ||||||||||||||||||||| ||||| ||||||  ||||||||| |||||     
T  29743266 gggcggtttcaccgtccgacgatcccgggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacatttacag 29743365  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 321  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29743366 aaagaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacac 29743432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 158 - 327
Target Start/End: Complemental strand, 34948943 - 34948770
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    |||||||||  |||||  ||||||||| ||||||||||| ||||||||    |||||||||||||||||||||||||||||| | ||||||||| |||||    
T  34948943 tgggcggttctaccgtatggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttaca 34948844  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||| |||||| ||||||| ||| | ||||||||||||||||| |||||    
T  34948843 aaaagaaaaatttgggcaatctgaaaattgtcacacacaaatagatcttgaaattttatttagcacactattga 34948770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 158 - 327
Target Start/End: Original strand, 398599 - 398772
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    ||||||||| ||||||   ||||||||||||||||||||||||||||    ||||||||||||||||||||||||| |||||   ||||||||| ||| |    
T  398599 tgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttata 398698  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  398699 aaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 158 - 327
Target Start/End: Original strand, 13837803 - 13837976
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    |||||||||  |||||  |||||||||||||| |||| |||| ||||    ||||||||| |||||||||||||||||||||   || |||||| |||||    
T  13837803 tgggcggttctaccgtatggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacatttaca 13837902  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||    
T  13837903 aaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattga 13837976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 201 - 326
Target Start/End: Complemental strand, 33229474 - 33229349
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 300  Q
    ||||| ||||||| ||||||||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||| ||||| ||||| |||    
T  33229474 tcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttgggcaatctgaaaattcttacacgtaaataagtc 33229375  T
Q  301 tcggaattttatttagcacacaattg 326  Q
    |||| |||||||||||||||| ||||    
T  33229374 tcgggattttatttagcacactattg 33229349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 160 - 257
Target Start/End: Complemental strand, 24698000 - 24697899
Alignment:
Q  160 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctc----gataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaa 255  Q
    ||||||||||||| ||||||||||||| |  ||||||||||||    |||||||||| |||||||| | ||||||||||| | |||||||||||||||||    
T  24698000 ggcggtttcaccgcccggcgaccccggacactcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacacttacaaa 24697901  T
Q  256 aa 257  Q
    ||    
T  24697900 aa 24697899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 31028545 - 31028435
Alignment:
Q  162 cggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaa 257  Q
    ||||||||||| |||||||||||| ||||| |||||| ||||||    |||||||||||||||||  ||||| |||||   ||||||||| |||||||||    
T  31028545 cggtttcaccgcccggcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaaa 31028446  T
Q  258 gaaaaatttgg 268  Q
    | ||| |||||    
T  31028445 ggaaattttgg 31028435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 13647000 - 13647046
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat 205  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||    
T  13647000 gggcggtttcaccacccggcgaccccgggcggtcgcccgggctcgat 13647046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 34385572 - 34385526
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat 205  Q
    |||||||||||||| |||||||||||||||||| |||| ||||||||    
T  34385572 gggcggtttcaccgcccggcgaccccgggcggttgccctggctcgat 34385526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 24695516 - 24695572
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaa 257  Q
    ||||| ||||||  ||||||| ||||||||||||| | |||||||||||||||||||    
T  24695516 tcgatcattttttaacattaggctcaacccaaaagcccattaacacacttacaaaaa 24695572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 2753336 - 2753376
Alignment:
Q  162 cggtttcaccgtccggcgaccccgggcggtcgcccgggctc 202  Q
    ||||||||||||||||||||||  |||||||||||| ||||    
T  2753336 cggtttcaccgtccggcgaccctaggcggtcgcccgagctc 2753376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 2e-67; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 158 - 320
Target Start/End: Complemental strand, 34389241 - 34389075
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||||||  ||||||||||||||||    
T  34389241 tgggcgatttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttaca 34389142  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcaca 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34389141 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcaca 34389075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 159 - 327
Target Start/End: Complemental strand, 37002328 - 37002156
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgg----gctcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| ||||||||||||||||||||  |||    | ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  37002328 gggcggtttcaccgcccggcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttacaa 37002229  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  37002228 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattga 37002156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 159 - 327
Target Start/End: Original strand, 26624728 - 26624901
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga-----taatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||     ||||||||||| ||||||| ||| |||||||| ||||||||||||||||    
T  26624728 gggcggtttcaccgcccggcaaccccgggcggtcgcctgggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacacttaca 26624827  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26624828 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 26624901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 185 - 327
Target Start/End: Original strand, 35090177 - 35090323
Alignment:
Q  185 gggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaa 280  Q
    |||||||||||||||||||||    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  35090177 gggcggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaa 35090276  T
Q  281 ttctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  35090277 ttctcacacgcaaataggtctcggaattttatttagcacactattga 35090323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 203 - 327
Target Start/End: Complemental strand, 38638372 - 38638248
Alignment:
Q  203 gataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctc 302  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38638372 gataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctc 38638273  T
Q  303 ggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||| |||||    
T  38638272 ggaattttatttagcacactattga 38638248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 159 - 327
Target Start/End: Complemental strand, 8867915 - 8867743
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||    |||||||||| ||||||| ||| ||||||| ||||||| ||| ||||||    
T  8867915 gggcagtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttacaa 8867816  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  8867815 aaagaaaaatttgggcaatcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattga 8867743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 158 - 327
Target Start/End: Original strand, 5555469 - 5555642
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    |||||||||  |||||  |||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| | |||||| || |||||    
T  5555469 tgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcatttaca 5555568  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| |||||    
T  5555569 aaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattga 5555642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 159 - 327
Target Start/End: Complemental strand, 43184652 - 43184480
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| |||||||  |||||||||||| ||||||||||    ||||||| | ||| ||||| |||||||||| ||||||||| ||||||||    
T  43184652 gggcggtttcaccgcccggcgattccgggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatacttacaa 43184553  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  43184552 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattga 43184480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 158 - 327
Target Start/End: Complemental strand, 3114281 - 3114108
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    |||||||||  |||||  || |||||||| ||||||||||||||||||    |||||||||||||||||||||||||||||| | ||||||||| |||||    
T  3114281 tgggcggttctaccgtatggtgaccccggacggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttaca 3114182  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| |||||    
T  3114181 aaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattga 3114108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 159 - 327
Target Start/End: Original strand, 33685547 - 33685719
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| ||||||||||| ||| ||||| |||||||||    |||||||||||||||| || ||||||||||| | ||||||||||||||||    
T  33685547 gggcggtttcaccgcccggcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacacttacaa 33685646  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||  ||||||||||||||||| |||||    
T  33685647 aaagaaaaatttgggcaatctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattga 33685719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 176 - 327
Target Start/End: Original strand, 8394125 - 8394280
Alignment:
Q  176 ggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 271  Q
    |||||||||||||||||||||||||||||    |||||||||||||||| |||||||| ||||||| ||||||||| |||||||| ||||||||||||||    
T  8394125 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggca 8394224  T
Q  272 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  8394225 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 8394280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 176 - 327
Target Start/End: Original strand, 36630816 - 36630971
Alignment:
Q  176 ggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 271  Q
    ||||||||||| |||||||||||||||||    |||||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  36630816 ggcgaccccggacggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggca 36630915  T
Q  272 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||||||||| |||||    
T  36630916 atctgaaaattgtcacacgcaaataggtcttggaattttagttagcacactattga 36630971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 177 - 327
Target Start/End: Complemental strand, 14777273 - 14777119
Alignment:
Q  177 gcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaa 272  Q
    |||| ||||||||||||||||||||||||    ||||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||||||    
T  14777273 gcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggcaa 14777174  T
Q  273 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  14777173 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 14777119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 159 - 327
Target Start/End: Original strand, 7002708 - 7002880
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgata----atttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||     ||||||  |||||| || ||||||||||| |||||||||||| |||||    
T  7002708 gggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaa 7002807  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  7002808 aaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattga 7002880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 159 - 327
Target Start/End: Original strand, 7048579 - 7048751
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgata----atttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||     ||||||  |||||| || ||||||||||| |||||||||||| |||||    
T  7048579 gggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaa 7048678  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  7048679 aaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattga 7048751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 201 - 327
Target Start/End: Complemental strand, 40920141 - 40920015
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 300  Q
    |||||||||||||||||||||| | |||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  40920141 tcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatgcaaataggtc 40920042  T
Q  301 tcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||| |||||    
T  40920041 tcggaattttatttagcacactattga 40920015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 36658210 - 36658336
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 300  Q
    ||||||||||||||||||| ||| ||||| ||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36658210 tcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaatttgggcaatctgaaaattctcacacgcaaataggtc 36658309  T
Q  301 tcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||| |||||    
T  36658310 tcggaattttatttagcacactattga 36658336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 10868575 - 10868514
Alignment:
Q  239 attaacacacttacaaaaagaaaaatttgggc--aatctgaaaattctcacacgcaaatagg 298  Q
    ||||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  10868575 attaacacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcgcaaatagg 10868514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 2e-67; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 158 - 320
Target Start/End: Original strand, 37254623 - 37254789
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    |||||||||||||||  |||||||||| ||||||||||| |||||||    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37254623 tgggcggtttcaccgctcggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacacttaca 37254722  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcaca 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37254723 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcaca 37254789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 159 - 327
Target Start/End: Complemental strand, 12279044 - 12278872
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| ||||||| ||||||||||||||||| ||||||    |||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  12279044 gggcggtttcaccgcccggcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacacttacaa 12278945  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12278944 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 12278872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 159 - 327
Target Start/End: Complemental strand, 17332735 - 17332563
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||    |||||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  17332735 gggcggtttcaccgcccggcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacacttacaa 17332636  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  17332635 aaagaaaaatttgggcaatctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattga 17332563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 159 - 327
Target Start/End: Original strand, 31680350 - 31680522
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    |||||||| | |||||||| ||||||||||| ||||||||||||||||||    
T  31680350 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacacttacaa 31680449  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  31680450 aaagaaaaatttgggcaatctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattga 31680522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 159 - 329
Target Start/End: Complemental strand, 31501900 - 31501726
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| |||||||||||||||| | |||||||||||||    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  31501900 gggcggtttcaccgcccggcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacacttacaa 31501801  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatg 329  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||    
T  31501800 aaagaaaaatttgggcaatctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattgatg 31501726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 33430350 - 33430476
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 300  Q
    |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33430350 tcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 33430449  T
Q  301 tcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||| |||||    
T  33430450 tcggaattttatttagcacactattga 33430476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 159 - 327
Target Start/End: Original strand, 10033910 - 10034082
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    ||||||||  |||||  ||||||||||| || ||||||||||||||    ||||||||||||||||||||||||||||||| | ||||||||| ||||||    
T  10033910 gggcggttctaccgtatggcgaccccggacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 10034009  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||    
T  10034010 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattga 10034082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 159 - 327
Target Start/End: Original strand, 13817960 - 13818132
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    ||||||||  |||||  ||||||||||||||||||| |||||||||    ||||||||||||||||||||||||||||||| | ||||||||| ||||||    
T  13817960 gggcggttctaccgtatggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 13818059  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||    
T  13818060 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattga 13818132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 202 - 327
Target Start/End: Complemental strand, 16334013 - 16333888
Alignment:
Q  202 cgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtct 301  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16334013 cgataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtct 16333914  T
Q  302 cggaattttatttagcacacaattga 327  Q
     ||||||||||||||||||| |||||    
T  16333913 tggaattttatttagcacactattga 16333888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 158 - 327
Target Start/End: Complemental strand, 26283503 - 26283330
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    ||||||||| ||||||   |||||| ||||||||||||||||||||||    |||||||||||||||||||||||| ||||||  ||||||||| ||| |    
T  26283503 tgggcggttccaccgtgtagcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttata 26283404  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  26283403 aaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 26283330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 203 - 327
Target Start/End: Complemental strand, 39657642 - 39657518
Alignment:
Q  203 gataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctc 302  Q
    |||||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  39657642 gataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtctt 39657543  T
Q  303 ggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||| |||||    
T  39657542 ggaattttatttagcacactattga 39657518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 178 - 321
Target Start/End: Complemental strand, 1776541 - 1776394
Alignment:
Q  178 cgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaat 273  Q
    ||||||||||||||||||||||||||||    |||||||| |||||| | |||||| ||||||| ||||||||| |||||||||||||||||||||||||    
T  1776541 cgaccccgggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggcaat 1776442  T
Q  274 ctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 321  Q
     |||||||| |||||||||||||||||| |||||||||||||||||||    
T  1776441 ttgaaaattgtcacacgcaaataggtcttggaattttatttagcacac 1776394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 16155026 - 16155152
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 300  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  16155026 tcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacacgcaaataggtc 16155125  T
Q  301 tcggaattttatttagcacacaattga 327  Q
    | ||||||||||||||||||| |||||    
T  16155126 ttggaattttatttagcacactattga 16155152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 158 - 321
Target Start/End: Complemental strand, 36293806 - 36293639
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    |||||||||  |||||  |||||||||| ||||||| |||| ||||||    |||||||| ||||||||||||||||||||| | ||||||||| |||||    
T  36293806 tgggcggttctaccgtgtggcgaccccgagcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacatttaca 36293707  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 321  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  36293706 aaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacac 36293639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 158 - 327
Target Start/End: Original strand, 39434678 - 39434851
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    |||||||||  |||||  |||||||| ||||||||||||||||||||    |||||||| |||||||||||||||||||||| | ||||||||| |||||    
T  39434678 tgggcggttctaccgtgtggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttaca 39434777  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||| ||||||||||||||||||||||||| ||||| | ||||||||||  |||||||||||||||||| |||||    
T  39434778 aaatgaaaaatttgggcaatctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattga 39434851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 176 - 321
Target Start/End: Complemental strand, 3155798 - 3155649
Alignment:
Q  176 ggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 271  Q
    ||||| ||||||||||||| ||||||||||    |||||||||||||| ||||||||| ||||||| ||||||||| ||| |||||||||||||||| ||    
T  3155798 ggcgatcccgggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacatttataaaaagaaaaatttggaca 3155699  T
Q  272 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 321  Q
    ||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  3155698 atctgaaaattgtcacacgcaaatagatcttggaattttatttagcacac 3155649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 204 - 326
Target Start/End: Original strand, 43068909 - 43069031
Alignment:
Q  204 ataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcg 303  Q
    ||||||||| |||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||| | ||||| ||||||    
T  43068909 ataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttacatgtaaataagtctcg 43069008  T
Q  304 gaattttatttagcacacaattg 326  Q
    |||||||||||||||||| ||||    
T  43069009 gaattttatttagcacactattg 43069031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 19985968 - 19986094
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 300  Q
    |||||||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||| ||||| |||||| |||||||||||||||||    
T  19985968 tcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaagaaaaatttgggtaatctaaaaattatcacacgcaaataggtc 19986067  T
Q  301 tcggaattttatttagcacacaattga 327  Q
    | | ||||||||||| ||||| |||||    
T  19986068 ttgaaattttatttaacacactattga 19986094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 159 - 327
Target Start/End: Original strand, 36291354 - 36291526
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| ||| |||| ||||||||||| ||||| |||||    |||||||||||||||||   |||| ||||||  ||||||||| ||||||    
T  36291354 gggcggtttcaccgcccgccgactccgggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacatttacaa 36291453  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||| |||||| | |||| |||||||||||| |||||||||||| ||||| |||||    
T  36291454 aaagaaaaatttgggcaatctcaaaattattacacacaaataggtctcagaattttatttaacacactattga 36291526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 201 - 298
Target Start/End: Original strand, 28801316 - 28801415
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttggg--caatctgaaaattctcacacgcaaatagg 298  Q
    ||||||||||||||||||||||  ||| ||||||| | |||||||||||||||||||||||||||||||   ||| ||||||||||||||||||||||||    
T  28801316 tcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttgggaaaaatatgaaaattctcacacgcaaatagg 28801415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 26543949 - 26543903
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat 205  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||    
T  26543949 gggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgat 26543903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 4e-66; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 159 - 327
Target Start/End: Original strand, 45418566 - 45418738
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    |||||||||| |||||||  ||||||||||| ||||||||||||||||||    
T  45418566 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacacttacaa 45418665  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  45418666 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattga 45418738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 159 - 327
Target Start/End: Original strand, 8147334 - 8147507
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    ||| |||||||||||||| |||| |||||||||||||||||||||||||    
T  8147334 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacacttacaa 8147433  T
Q  255 aaagaaaaatttgggcaatctg-aaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  8147434 aaagaaaaatttgggcaatctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattga 8147507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 159 - 327
Target Start/End: Complemental strand, 44084787 - 44084615
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||    ||||||||||||||| || ||| ||||||||  ||||||||||||||||    
T  44084787 gggcggtttcaccgcccggcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttacaa 44084688  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||    
T  44084687 aaagaaaaatttgggcaatctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattga 44084615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 159 - 327
Target Start/End: Complemental strand, 8059517 - 8059345
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctc----gataatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||| ||| ||||||||| || |||||| |||||    |||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  8059517 gggcggtttcaccgcccgacgaccccggccgatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaa 8059418  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||| |||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  8059417 aaagaaaaatttggccaatttgaaaattctcacacacaaatcggtctcggaattttatttagcacacaattga 8059345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 151 - 327
Target Start/End: Original strand, 42439961 - 42440141
Alignment:
Q  151 atatacgtgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacac 246  Q
    |||||| |||||||||  |||||  |||||||||||||||||||||||||||||    |||||||||||||||||||| |||||||||| | ||||||||    
T  42439961 atatacatgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacac 42440060  T
Q  247 acttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    | |||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||| |||||    
T  42440061 atttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattga 42440141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 179 - 327
Target Start/End: Complemental strand, 41251798 - 41251646
Alignment:
Q  179 gaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatc 274  Q
    |||||||||||||||||||||||||||    |||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||    
T  41251798 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 41251699  T
Q  275 tgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  41251698 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 41251646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 770977 - 771147
Alignment:
Q  159 gggcggtttcaccgtccggcgacc-----ccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacact 249  Q
    |||||||||||||| |||||||||     |||||||||||||||||||||||    || ||||||||||||||| ||||| ||||| | |||||||||||    
T  770977 gggcggtttcaccgcccggcgaccggatcccgggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacacact 771076  T
Q  250 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  771077 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaactttatttagcaca 771147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 201 - 327
Target Start/End: Complemental strand, 12756975 - 12756849
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 300  Q
    |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  12756975 tcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacgcaaataagtc 12756876  T
Q  301 tcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||| |||||    
T  12756875 tcggaattttatttagcacactattga 12756849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 158 - 327
Target Start/End: Complemental strand, 6403989 - 6403816
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    ||||||||| ||||||   |||||||||||||||||||||||||||||    |||||||||||||||||||||||| ||||||  ||||||||| ||| |    
T  6403989 tgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttata 6403890  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  6403889 aaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 6403816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 158 - 327
Target Start/End: Original strand, 35962697 - 35962870
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    |||||||||  |||||  ||||||||| |||||||| ||||||||||    |||||||||||||||||||||||||||||||   ||||||||| |||||    
T  35962697 tgggcggttctaccgtatggcgaccccaggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacatttaca 35962796  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||| ||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| |||||    
T  35962797 aaaagaaaattttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattga 35962870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 182 - 321
Target Start/End: Original strand, 18981622 - 18981765
Alignment:
Q  182 cccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctga 277  Q
    |||||||||||| |||||||||||    |||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||| | |    
T  18981622 cccgggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacatttacaaaaagaaaaatttgggcaatttaa 18981721  T
Q  278 aaattctcacacgcaaataggtctcggaattttatttagcacac 321  Q
    ||||| |||||||||||||||||| |||||||||||||||||||    
T  18981722 aaattgtcacacgcaaataggtcttggaattttatttagcacac 18981765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 176 - 327
Target Start/End: Complemental strand, 31581789 - 31581634
Alignment:
Q  176 ggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 271  Q
    ||||||| ||||||||||||| |||||||    || |||||||| |||||||||| |||||||| | ||||||||| |||||||||||||||||||||||    
T  31581789 ggcgaccacgggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaaaagaaaaatttgggca 31581690  T
Q  272 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||    
T  31581689 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattga 31581634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 176 - 327
Target Start/End: Complemental strand, 32127308 - 32127153
Alignment:
Q  176 ggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 271  Q
    ||||||||||||||||||||||||||||||    ||||||||||||||| |||| |||||||||   ||||||||| |||||||||||||||||| ||||    
T  32127308 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacatttacaaaaagaaaaatttaggca 32127209  T
Q  272 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||||||||| |||||    
T  32127208 atctgaaaattgtcacacgcaaatagatcttggaattttatttagcacactattga 32127153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 158 - 327
Target Start/End: Complemental strand, 17445224 - 17445053
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    |||||||||  |||||  ||||||| |||||||||||||| |||||||    |||||||||||  ||||||||||||||||| | ||||||||| |||||    
T  17445224 tgggcggttctaccgtgtggcgacctcgggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacatttaca 17445127  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  17445126 aaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 17445053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 179 - 327
Target Start/End: Original strand, 16405603 - 16405755
Alignment:
Q  179 gaccccgggcggtcgcccgggctc----gataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatc 274  Q
    ||||| ||||||||||||||||||    |||||||||||||| ||||||||||||||||||   ||||||||| ||| |||||||||||||||| |||||    
T  16405603 gaccctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacatttataaaaagaaaaatttggacaatc 16405702  T
Q  275 tgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||| |||||    
T  16405703 tgaaaattgtcacacgcaaataagtcttggaattttatttagcacactattga 16405755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 158 - 309
Target Start/End: Complemental strand, 2958285 - 2958131
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgata---atttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||  |||||  |||||||||||||||||| |||||||||||    | ||||||||||||||||||||||||||| | ||||||||| ||||||    
T  2958285 tgggcggttctaccgtatggcgaccccgggcggtcgtccgggctcgatcgataattttgcacattagactcaacccaaaagcccattaacacatttacaa 2958186  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattt 309  Q
    | ||||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  2958185 agagaaaaatttgggtaatctgaaaattgtcacacgcaaataggtcttggaattt 2958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 2285891 - 2286017
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 300  Q
    |||||||||||||||||||| |  ||||| ||||||| ||||||||| |||| ||| |||||||||| |||||||||||||| ||||||||||||||||     
T  2285891 tcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttacgaaaggaaaaatttgagcaatctgaaaattgtcacacgcaaataggtt 2285990  T
Q  301 tcggaattttatttagcacacaattga 327  Q
    | ||||||||||||||||||| |||||    
T  2285991 ttggaattttatttagcacactattga 2286017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 201 - 320
Target Start/End: Complemental strand, 26162837 - 26162721
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 300  Q
    |||||||||||| ||||||| | |||||||||||  | ||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||    
T  26162837 tcgataatttttacacattaaattcaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcaaacacaaataggtc 26162738  T
Q  301 tcggaattttatttagcaca 320  Q
    |||||   ||||||||||||    
T  26162737 tcgga---ttatttagcaca 26162721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 174 - 286
Target Start/End: Original strand, 26237955 - 26238071
Alignment:
Q  174 ccggcgaccccgggcggtcgcccgggctcgata---atttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggc 270  Q
    ||||||||||||||||||||||||||||||||    ||||||||| ||||||  ||| ||||||||| ||||||||||||||||||||||||||||||||    
T  26237955 ccggcgaccccgggcggtcgcccgggctcgatcgatatttttgcaaattagatgcaaaccaaaagtccattaacacacttacaaaaagaaaaatttgggc 26238054  T
Q  271 -aatctgaaaattctca 286  Q
     |||||||||| |||||    
T  26238055 aaatctgaaaactctca 26238071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 298
Target Start/End: Complemental strand, 4555349 - 4555250
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggc--aatctgaaaattctcacacgcaaatagg 298  Q
    |||||||||||||||||| | || |||||||||||    ||||||||||||||||||||||| |||||||  |||||||||||||||||||| |||||||    
T  4555349 tcgataatttttgcacatcaaacccaacccaaaagctcgttaacacacttacaaaaagaaaattttgggcaaaatctgaaaattctcacacgtaaatagg 4555250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 298
Target Start/End: Complemental strand, 7072710 - 7072589
Alignment:
Q  185 gggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaatta--acacacttacaaaaagaaaaatttgggcaa--tctg 276  Q
    |||||||||||||||||||||    |||||||  |||||| |||||||||||||| | ||||  ||||||||| ||||||||||  |||| |||  ||||    
T  7072710 gggcggtcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacacacacttataaaaagaaaatattggacaaattctg 7072611  T
Q  277 aaaattctcacacgcaaatagg 298  Q
    ||||||||| |||| |||||||    
T  7072610 aaaattctcgcacgtaaatagg 7072589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 34523223 - 34523269
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat 205  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||    
T  34523223 gggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgat 34523269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 4e-60; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 158 - 320
Target Start/End: Original strand, 35907534 - 35907700
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggct----cgataatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||    |||||||||||||||||||||| ||||||||||| ||||||  |||||||||    
T  35907534 tgggcggtttcaccgcccggcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacacttaca 35907633  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcaca 320  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35907634 aaaagaaaattttgggtaatctgaaaattctcacacgcaaataggtctcggaattttatttagcaca 35907700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 159 - 320
Target Start/End: Original strand, 17445296 - 17445461
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||  | |||||||||||  ||||||||||||||| |||    |||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  17445296 gggcggtttcattgcccggcgaccccatgcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacacttacaa 17445395  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcaca 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17445396 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcaca 17445461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 8 - 155
Target Start/End: Original strand, 34502560 - 34502710
Alignment:
Q  8 ttaaccacgtcttttatcatcataaatgacattatatannnnnnngaggcaattcactgagtttatccttcttc---ttccgcctctcactcgtaaacgt 104  Q
    ||||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||||||||||||   ||| |||||||||||||||||||    
T  34502560 ttaaccacgtcttttatcatcataaatgacattatatatttttttgaggcaattcactgtgtttatccttcttcatcttcagcctctcactcgtaaacgt 34502659  T
Q  105 tggcaccattttcttagattctcttctaataagatcaaattgagcaatata 155  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34502660 tggcgccattttcttagattctcttctaataagatcaaattgagcaatata 34502710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 158 - 327
Target Start/End: Original strand, 7433427 - 7433600
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    |||||||||  |||||  ||| |||||||||||||||||| |||||||    |||||||||||||||||||||||||||||| | ||||||||| |||||    
T  7433427 tgggcggttctaccgtatggcaaccccgggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacatttaca 7433526  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||| |||||||||||| |||||| |||||| ||||||||||| | ||||||||||||||||| |||||    
T  7433527 aaaagaaaattttgggcaatctaaaaattgtcacacacaaataggtcttgaaattttatttagcacactattga 7433600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 158 - 327
Target Start/End: Original strand, 26144237 - 26144410
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    ||||||||| ||||||   ||||||||||||||||||||||||||||    ||||||||||||||||||||||||| |||||   ||||||||| ||| |    
T  26144237 tgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttata 26144336  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  26144337 aaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 26144410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 159 - 327
Target Start/End: Original strand, 3828967 - 3829138
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    ||||||||||| |  ||||| ||||||| ||||||| |||| ||||    |||||||||||||||| || ||||||||||||  ||||||||||||||||    
T  3828967 gggcggtttcatcacccggcaaccccggacggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaa 3829066  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| |||||    
T  3829067 aaagaaaaatttgggcaatctgaaaattttcatacgcaaataggtct-ggaattttatttagcacactattga 3829138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 159 - 320
Target Start/End: Complemental strand, 321561 - 321396
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||  |||||||   |||||||||| |||||||||||    ||||||||  |||||||  ||||||||||||| ||||||||| ||||||    
T  321561 gggcggtttcaccacccggcgatttcgggcggtcgtccgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaa 321462  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcaca 320  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||    
T  321461 aaagaaaaatttgggcaatctgaaaattctcatatgcaaataggtctcggaattttatttaacaca 321396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 176 - 319
Target Start/End: Complemental strand, 32982223 - 32982076
Alignment:
Q  176 ggcgaccccgggcggtcgcccgggc----tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 271  Q
    ||||||||||||||||||| |||||    ||||||||||||||||||||||| ||||| ||||| | ||||||| | |||||||||||||||||||| ||    
T  32982223 ggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaagaaaaatttggaca 32982124  T
Q  272 atctgaaaattctcacacgcaaataggtctcggaattttatttagcac 319  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||||    
T  32982123 atctgaaaattgtcacacacaaataggtcttggaattttatttagcac 32982076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 159 - 316
Target Start/End: Complemental strand, 42311125 - 42310964
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    ||||||||  |||||  ||||||||| | || |||||||||||||||    |||||||||||||||||||||||||||||| |  |||||||| ||||||    
T  42311125 gggcggttctaccgtatggcgaccccagacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatttacaa 42311026  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttag 316  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||| | ||||||||||||    
T  42311025 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataagtcttgaaattttatttag 42310964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 159 - 298
Target Start/End: Complemental strand, 41972458 - 41972314
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgg---gctcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaa 255  Q
    |||||||| |||||||| ||||||||||||||||||| ||   | ||||||||||||||||||||||  ||||| ||||| | |||||||||||||||||    
T  41972458 gggcggttccaccgtccagcgaccccgggcggtcgcctggctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacacttacaaa 41972359  T
Q  256 aagaaaaatttgg--gcaatctgaaaattctcacacgcaaatagg 298  Q
    |||||||||||||    ||||||||||||||||||||||||||||    
T  41972358 aagaaaaatttggaaaaaatctgaaaattctcacacgcaaatagg 41972314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 159 - 298
Target Start/End: Original strand, 33489670 - 33489815
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggct----cgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    |||||||||||||  ||||||||||||| ||||||  |||| |    |||||||||||| ||||||||||||| | ||||| | |||||||||||||| |    
T  33489670 gggcggtttcaccacccggcgaccccggacggtcgttcgggattgttcgataatttttgtacattagactcaaactaaaagcccattaacacacttacta 33489769  T
Q  255 aaagaaaaatttgggc--aatctgaaaattctcacacgcaaatagg 298  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||    
T  33489770 aaagaaaaatttgagcaaaatctgaaaattctcacacgcaaatagg 33489815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 23313220 - 23313345
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat-----aatttttgcacattagactcaacccaaaagtcaattaacacacttac 252  Q
    |||||||||  |||||  ||||| | |||||||| |||||||||||||     | || ||||||||||||||||||  ||||||  ||||||||| ||||    
T  23313220 tgggcggttctaccgtatggcgatctcgggcggttgcccgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacatttac 23313319  T
Q  253 aaaaagaaaaatttgggcaatctgaa 278  Q
    ||||||||||||||||||||||||||    
T  23313320 aaaaagaaaaatttgggcaatctgaa 23313345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 34513320 - 34513396
Alignment:
Q  75 cttcttcttccgcctctcactcgtaaacgttggcaccattttcttagattctcttctaataagatcaaattgagcaa 151  Q
    |||| ||||| ||||||||||||| ||||||||| |||||||||||||||||||| || |||||||||||| |||||    
T  34513320 cttcatcttcagcctctcactcgttaacgttggcgccattttcttagattctcttgtagtaagatcaaatttagcaa 34513396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 44352667 - 44352621
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat 205  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||    
T  44352667 gggcggtttcaccatccggcgaccccgggaggtcgcccgggctcgat 44352621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 31866960 - 31867005
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga 204  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||    
T  31866960 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggttcga 31867005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 34513243 - 34513277
Alignment:
Q  8 ttaaccacgtcttttatcatcataaatgacattat 42  Q
    ||||||||||||||| |||||||||||||||||||    
T  34513243 ttaaccacgtcttttttcatcataaatgacattat 34513277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 176 - 327
Target Start/End: Original strand, 5230 - 5385
Alignment:
Q  176 ggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 271  Q
    ||||||||||||||||||||||||||||||    |||||||||||||||||| ||| | ||||| |||||||||||||||||||||||||| ||||||||    
T  5230 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 5329  T
Q  272 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  5330 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattga 5385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 159 - 327
Target Start/End: Original strand, 31463 - 31635
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 254  Q
    ||||||||||| || ||||||||||| | |||||||||||||||||    ||||||||||||| ||||| ||||||||||| | ||||||||||||||||    
T  31463 gggcggtttcatcgcccggcgaccccagacggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacacttacaa 31562  T
Q  255 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||| | |||||||||| |||||| |||||    
T  31563 aaagaaaaatttggacaatctgaaaattctcactcgcaaataggtctagtaattttattttgcacactattga 31635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 201 - 327
Target Start/End: Original strand, 52954 - 53080
Alignment:
Q  201 tcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtc 300  Q
    |||||||||||||||||||||| | |||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  52954 tcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatgcaaataggtc 53053  T
Q  301 tcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||| |||||    
T  53054 tcggaattttatttagcacactattga 53080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 158 - 327
Target Start/End: Original strand, 17824 - 17997
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    |||||||||  |||||  |||||||||| ||| ||| ||||||||||    ||||||||||||||||||||||||||||||| | ||||||||| |||||    
T  17824 tgggcggttctaccgtgtggcgaccccgagcgatcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttaca 17923  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||| | ||||||||||||||||| |||||    
T  17924 aaaagaaaaatttgggcaatctgaaaattgtcacatgtaaataggtcttgaaattttatttagcacactattga 17997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 158 - 327
Target Start/End: Complemental strand, 480642 - 480469
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat----aatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    ||||||||| ||||||   |||||||||||||||||||||||||||||    |||||||||||||||||||||||| |||||   ||||||||| ||| |    
T  480642 tgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttata 480543  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  480542 aaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 480469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 158 - 327
Target Start/End: Original strand, 504 - 677
Alignment:
Q  158 tgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcga----taatttttgcacattagactcaacccaaaagtcaattaacacacttaca 253  Q
    ||||||||| ||||||   |||| |||||||||||||||||||||||    ||||||||||||||||||||||||| |||||   ||||||||| ||| |    
T  504 tgggcggttccaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttata 603  T
Q  254 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 327  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  604 aaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 1260 - 1306
Alignment:
Q  159 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat 205  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||    
T  1260 gggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgat 1306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 194021 - 194057
Alignment:
Q  169 accgtccggcgaccccgggcggtcgcccgggctcgat 205  Q
    |||| ||||||||||||||||||||||||||||||||    
T  194021 accgcccggcgaccccgggcggtcgcccgggctcgat 194057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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