View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0154-Insertion-15 (Length: 321)
Name: NF0154-Insertion-15
Description: NF0154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0154-Insertion-15 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 8 - 321
Target Start/End: Complemental strand, 10117319 - 10117008
Alignment:
| Q |
8 |
gtttatacaaattaacattcaggtaatagaaaactgcatgttgctatatataccatatatgtaatcaaagaatacaagtgatcatgtatagtattcaatc |
107 |
Q |
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| T |
10117319 |
gtttatacaaattaacattcaggtaatagaaaactgcatgttgctatatataccatatatgtaatcaaagaatacaagtgatcatgtatagtattcaatc |
10117220 |
T |
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| Q |
108 |
tatatgccaatcatgtaaatcttttttattcaacaattcagtcctatcacacttatgaagtaccgacatagatacatacaccagacatgacgctacacga |
207 |
Q |
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| T |
10117219 |
tatatgccaatcatgtaaatcttttttattcaacaattcagtcctatcacacttatgaagtaccgacatagatacatacaccagacatgacgctacacga |
10117120 |
T |
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| Q |
208 |
tgctgacatcaacaagtaaacatgtaaaaagttnnnnnnnnntaattgaagtgattgaatctaactacatgtgtcgatgttaacgcaccattagtccaaa |
307 |
Q |
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| T |
10117119 |
tgctgacatcaacaagtaaacatgtaaaaagttaaaaaaaa--aattgaagtgattgaatctaactacatgtgtcgatgttaacacaccattagtccaaa |
10117022 |
T |
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| Q |
308 |
ccatcattgctaca |
321 |
Q |
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| T |
10117021 |
ccatcattgctaca |
10117008 |
T |
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