View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0154_2D_low_284 (Length: 225)

Name: NF0154_2D_low_284
Description: NF0154_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0154_2D_low_284
NF0154_2D_low_284
[»] chr8 (26 HSPs)
chr8 (20-216)||(24479323-24479517)
chr8 (128-223)||(34186700-34186793)
chr8 (131-223)||(4054174-4054264)
chr8 (131-223)||(7271943-7272033)
chr8 (122-217)||(36251425-36251518)
chr8 (130-223)||(12898816-12898907)
chr8 (130-223)||(27325851-27325942)
chr8 (130-223)||(37449312-37449403)
chr8 (127-223)||(29025353-29025447)
chr8 (131-223)||(42768297-42768387)
chr8 (132-223)||(36660339-36660428)
chr8 (129-223)||(32501082-32501174)
chr8 (129-223)||(11253428-11253520)
chr8 (130-223)||(37133749-37133840)
chr8 (120-223)||(34639626-34639727)
chr8 (137-219)||(5277393-5277473)
chr8 (130-223)||(43397874-43397965)
chr8 (131-192)||(22719562-22719623)
chr8 (128-192)||(10692553-10692617)
chr8 (131-225)||(23754594-23754686)
chr8 (134-192)||(36816507-36816565)
chr8 (131-225)||(7598800-7598891)
chr8 (132-192)||(32133445-32133505)
chr8 (170-223)||(10731639-10731690)
chr8 (130-223)||(10839369-10839460)
chr8 (136-225)||(27854661-27854748)
[»] chr7 (29 HSPs)
chr7 (129-223)||(24614202-24614294)
chr7 (131-223)||(41989628-41989720)
chr7 (129-219)||(41189427-41189517)
chr7 (130-223)||(3937010-3937101)
chr7 (131-223)||(38956506-38956596)
chr7 (130-225)||(25192804-25192897)
chr7 (127-225)||(47391209-47391305)
chr7 (127-223)||(40112838-40112932)
chr7 (127-223)||(43025433-43025527)
chr7 (131-223)||(44895460-44895550)
chr7 (132-223)||(32529745-32529834)
chr7 (130-192)||(43942754-43942816)
chr7 (134-223)||(44189202-44189288)
chr7 (130-219)||(46022154-46022241)
chr7 (131-223)||(22918057-22918147)
chr7 (130-225)||(48062148-48062241)
chr7 (130-219)||(7701641-7701728)
chr7 (132-192)||(38944919-38944979)
chr7 (129-223)||(31445411-31445503)
chr7 (129-223)||(35072248-35072340)
chr7 (127-192)||(3614330-3614395)
chr7 (131-223)||(40417867-40417957)
chr7 (131-223)||(46578023-46578113)
chr7 (129-192)||(38347666-38347730)
chr7 (129-223)||(35098589-35098681)
chr7 (170-223)||(38073313-38073364)
chr7 (130-224)||(39155011-39155104)
chr7 (133-190)||(32803813-32803870)
chr7 (134-225)||(42552989-42553078)
[»] chr2 (36 HSPs)
chr2 (129-223)||(41195677-41195769)
chr2 (130-223)||(22888704-22888795)
chr2 (134-223)||(6049236-6049323)
chr2 (130-223)||(9647225-9647316)
chr2 (130-223)||(18254096-18254187)
chr2 (130-223)||(37737858-37737949)
chr2 (130-225)||(9194332-9194425)
chr2 (130-223)||(1248779-1248870)
chr2 (130-192)||(9990813-9990875)
chr2 (131-223)||(19633375-19633466)
chr2 (131-223)||(19830276-19830367)
chr2 (130-223)||(32477425-32477516)
chr2 (130-223)||(42421785-42421876)
chr2 (130-223)||(43487472-43487563)
chr2 (132-223)||(9207683-9207772)
chr2 (130-223)||(2076662-2076753)
chr2 (130-223)||(41042347-41042438)
chr2 (124-192)||(27490611-27490679)
chr2 (130-192)||(21611542-21611604)
chr2 (132-223)||(34944979-34945068)
chr2 (132-219)||(41056636-41056721)
chr2 (131-225)||(3838768-3838860)
chr2 (130-219)||(3097748-3097835)
chr2 (130-219)||(25270469-25270556)
chr2 (130-187)||(9760145-9760202)
chr2 (130-192)||(8848584-8848646)
chr2 (130-219)||(13333057-13333144)
chr2 (131-192)||(7698293-7698354)
chr2 (134-223)||(42091393-42091482)
chr2 (132-192)||(29349628-29349688)
chr2 (131-222)||(31415004-31415093)
chr2 (135-225)||(39147857-39147945)
chr2 (170-223)||(6511344-6511395)
chr2 (170-222)||(17388530-17388580)
chr2 (129-194)||(18846731-18846796)
chr2 (128-194)||(136047-136110)
[»] chr5 (32 HSPs)
chr5 (121-225)||(1671633-1671735)
chr5 (132-223)||(13168615-13168704)
chr5 (131-225)||(7287077-7287169)
chr5 (130-223)||(36739041-36739132)
chr5 (130-225)||(8686982-8687075)
chr5 (130-223)||(18258680-18258771)
chr5 (130-223)||(26791131-26791222)
chr5 (131-223)||(33037613-33037703)
chr5 (131-223)||(41321348-41321438)
chr5 (126-225)||(15479560-15479657)
chr5 (130-223)||(1274451-1274541)
chr5 (134-223)||(2972417-2972504)
chr5 (126-192)||(5168305-5168371)
chr5 (129-225)||(14051201-14051295)
chr5 (132-223)||(1764317-1764406)
chr5 (130-225)||(28467340-28467433)
chr5 (139-223)||(7076464-7076546)
chr5 (131-192)||(28306020-28306081)
chr5 (130-225)||(35634722-35634816)
chr5 (130-219)||(17626083-17626170)
chr5 (131-223)||(14923166-14923256)
chr5 (131-223)||(18660852-18660941)
chr5 (130-223)||(39591773-39591864)
chr5 (130-223)||(39592165-39592256)
chr5 (130-218)||(7552854-7552940)
chr5 (134-223)||(13309976-13310063)
chr5 (130-225)||(22972208-22972301)
chr5 (133-192)||(39054709-39054768)
chr5 (126-188)||(42175045-42175107)
chr5 (127-155)||(1079848-1079876)
chr5 (128-192)||(3565206-3565270)
chr5 (130-194)||(42475559-42475623)
[»] chr1 (45 HSPs)
chr1 (131-225)||(48470730-48470822)
chr1 (130-225)||(19055646-19055739)
chr1 (129-225)||(33100899-33100993)
chr1 (131-225)||(3981914-3982006)
chr1 (130-223)||(649862-649953)
chr1 (131-220)||(26469455-26469542)
chr1 (130-223)||(27464944-27465035)
chr1 (130-223)||(31088274-31088365)
chr1 (134-225)||(43775297-43775386)
chr1 (130-224)||(21401490-21401582)
chr1 (130-223)||(37274920-37275011)
chr1 (130-223)||(45121368-45121458)
chr1 (131-223)||(37685422-37685512)
chr1 (131-223)||(37700006-37700096)
chr1 (131-223)||(44519039-44519129)
chr1 (130-225)||(23645502-23645595)
chr1 (137-223)||(50932397-50932481)
chr1 (134-223)||(45333804-45333891)
chr1 (135-223)||(35369793-35369879)
chr1 (128-223)||(52576186-52576280)
chr1 (131-225)||(15469945-15470036)
chr1 (137-215)||(26020970-26021046)
chr1 (129-223)||(31827044-31827136)
chr1 (130-223)||(45640395-45640485)
chr1 (131-225)||(50726136-50726228)
chr1 (131-223)||(8350087-8350176)
chr1 (131-219)||(44914459-44914546)
chr1 (130-219)||(46907292-46907379)
chr1 (137-225)||(3851249-3851335)
chr1 (131-223)||(15082939-15083028)
chr1 (127-192)||(30570646-30570711)
chr1 (131-218)||(37619642-37619727)
chr1 (131-218)||(2571733-2571819)
chr1 (129-188)||(30735179-30735238)
chr1 (130-223)||(9566847-9566938)
chr1 (127-225)||(49647035-49647130)
chr1 (130-223)||(50149039-50149130)
chr1 (131-188)||(19947632-19947689)
chr1 (135-223)||(40861154-40861240)
chr1 (170-225)||(6693248-6693301)
chr1 (131-165)||(6693294-6693328)
chr1 (131-192)||(26207963-26208024)
chr1 (130-225)||(18434886-18434979)
chr1 (130-158)||(29359781-29359809)
chr1 (139-218)||(51137547-51137624)
[»] chr6 (25 HSPs)
chr6 (122-223)||(1156813-1156912)
chr6 (130-223)||(33430249-33430340)
chr6 (129-223)||(32316814-32316906)
chr6 (131-223)||(552886-552976)
chr6 (131-225)||(14818023-14818115)
chr6 (131-225)||(31077885-31077977)
chr6 (131-225)||(5694039-5694131)
chr6 (130-223)||(15974701-15974792)
chr6 (136-225)||(18737460-18737547)
chr6 (130-223)||(26595442-26595533)
chr6 (130-223)||(34047480-34047571)
chr6 (130-219)||(16199547-16199634)
chr6 (132-192)||(11612310-11612370)
chr6 (130-223)||(4820460-4820551)
chr6 (131-223)||(277084-277174)
chr6 (131-223)||(13689882-13689972)
chr6 (142-223)||(3853206-3853285)
chr6 (131-223)||(22079451-22079541)
chr6 (129-225)||(30457596-30457690)
chr6 (134-223)||(2241917-2242003)
chr6 (129-158)||(8098495-8098524)
chr6 (125-182)||(30423434-30423491)
chr6 (131-223)||(33603168-33603258)
chr6 (143-218)||(11014890-11014963)
chr6 (131-225)||(17551267-17551358)
[»] chr4 (45 HSPs)
chr4 (130-223)||(29175318-29175409)
chr4 (130-225)||(27050973-27051066)
chr4 (130-223)||(44539827-44539918)
chr4 (129-225)||(26724858-26724952)
chr4 (131-223)||(39440577-39440667)
chr4 (131-223)||(43175077-43175167)
chr4 (131-219)||(53801647-53801733)
chr4 (130-223)||(37297142-37297232)
chr4 (130-223)||(51986135-51986226)
chr4 (130-225)||(26732316-26732409)
chr4 (130-223)||(23369219-23369310)
chr4 (130-223)||(31641452-31641543)
chr4 (126-223)||(36177999-36178094)
chr4 (131-223)||(38376378-38376468)
chr4 (127-223)||(27965080-27965172)
chr4 (134-223)||(11068781-11068868)
chr4 (134-223)||(24575742-24575829)
chr4 (130-223)||(26492100-26492191)
chr4 (134-225)||(19473847-19473936)
chr4 (139-225)||(38134444-38134528)
chr4 (130-219)||(34616658-34616745)
chr4 (130-219)||(38382418-38382505)
chr4 (130-223)||(39478530-39478621)
chr4 (130-219)||(47181938-47182025)
chr4 (130-219)||(48402084-48402171)
chr4 (131-219)||(15175643-15175729)
chr4 (131-223)||(46213063-46213153)
chr4 (170-225)||(2268434-2268487)
chr4 (130-223)||(2575677-2575768)
chr4 (134-192)||(10250406-10250464)
chr4 (130-223)||(37997347-37997438)
chr4 (130-223)||(40348887-40348973)
chr4 (130-223)||(42853670-42853761)
chr4 (130-217)||(56363932-56364017)
chr4 (131-194)||(26907970-26908033)
chr4 (131-188)||(38510661-38510716)
chr4 (130-223)||(39195150-39195241)
chr4 (170-225)||(29531533-29531586)
chr4 (139-194)||(3316474-3316529)
chr4 (129-223)||(5622551-5622643)
chr4 (137-188)||(45083098-45083149)
chr4 (170-223)||(50608551-50608602)
chr4 (131-192)||(5233558-5233619)
chr4 (163-223)||(45257069-45257127)
chr4 (129-190)||(49449031-49449092)
[»] chr3 (52 HSPs)
chr3 (131-223)||(37503635-37503725)
chr3 (130-225)||(46623998-46624091)
chr3 (131-223)||(32924169-32924259)
chr3 (131-225)||(19149081-19149173)
chr3 (129-223)||(41309210-41309302)
chr3 (129-223)||(55151603-55151695)
chr3 (130-223)||(27541389-27541480)
chr3 (132-225)||(35597253-35597344)
chr3 (134-223)||(42358529-42358616)
chr3 (131-223)||(288819-288909)
chr3 (131-223)||(36670902-36670992)
chr3 (131-223)||(42356972-42357062)
chr3 (127-223)||(52939744-52939838)
chr3 (131-220)||(44413283-44413370)
chr3 (130-225)||(31157564-31157657)
chr3 (130-225)||(52326110-52326203)
chr3 (129-223)||(52254024-52254116)
chr3 (132-225)||(24256660-24256751)
chr3 (130-223)||(33939331-33939422)
chr3 (130-223)||(37302639-37302730)
chr3 (130-223)||(38926721-38926812)
chr3 (135-223)||(5244322-5244408)
chr3 (130-218)||(44383287-44383373)
chr3 (134-225)||(8847201-8847289)
chr3 (130-225)||(37056944-37057037)
chr3 (131-225)||(16969454-16969546)
chr3 (131-225)||(47472420-47472512)
chr3 (130-223)||(13348021-13348112)
chr3 (130-219)||(21217609-21217696)
chr3 (132-225)||(35201323-35201414)
chr3 (130-223)||(44856046-44856137)
chr3 (131-223)||(7934068-7934157)
chr3 (131-192)||(13735852-13735913)
chr3 (132-219)||(23592555-23592640)
chr3 (131-225)||(14226593-14226685)
chr3 (131-225)||(26014903-26014995)
chr3 (130-220)||(44813232-44813320)
chr3 (130-223)||(5114171-5114262)
chr3 (130-192)||(35376968-35377030)
chr3 (170-223)||(44413849-44413900)
chr3 (130-223)||(9753432-9753525)
chr3 (134-223)||(7668079-7668165)
chr3 (133-223)||(44463450-44463538)
chr3 (130-185)||(42478086-42478143)
chr3 (135-192)||(11630642-11630699)
chr3 (127-192)||(28539624-28539689)
chr3 (132-188)||(23600719-23600775)
chr3 (154-223)||(20547901-20547968)
chr3 (170-223)||(41505584-41505635)
chr3 (127-192)||(39630501-39630566)
chr3 (130-218)||(44445392-44445478)
chr3 (130-190)||(25641470-25641530)
[»] scaffold0199 (1 HSPs)
scaffold0199 (130-223)||(8761-8852)
[»] scaffold0098 (1 HSPs)
scaffold0098 (131-224)||(49387-49478)
[»] scaffold0056 (1 HSPs)
scaffold0056 (130-223)||(76506-76597)
[»] scaffold0519 (1 HSPs)
scaffold0519 (129-223)||(11875-11967)
[»] scaffold0087 (1 HSPs)
scaffold0087 (131-225)||(53249-53341)
[»] scaffold0148 (1 HSPs)
scaffold0148 (130-187)||(20788-20845)
[»] scaffold0067 (1 HSPs)
scaffold0067 (170-223)||(35616-35667)


Alignment Details
Target: chr8 (Bit Score: 154; Significance: 8e-82; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 24479517 - 24479323
Alignment:
Q  20 aattccaccattgcatgacccaatctacaaagaagagggatggttgtgcatatgcaacaacaagtgttacacacccaatccatgatgacattaggttacc 119  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24479517 aattccaccattgcaagacccaatctacaaatcagagggatggttgtgcatatgcaacaacaagtgttacacacccaatccatgatgacattaggttacc 24479418  T
Q  120 ttttatgtttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaa 216  Q
     |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||||  |||||||||||||||||||||||||    
T  24479417 ctttatgtttagagttgtgttatttgagcattcatatatatgataacttttgtgacaactaaaattttac--aaaggaaatgagatattgacacaaa 24479323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 128 - 223
Target Start/End: Complemental strand, 34186793 - 34186700
Alignment:
Q  128 ttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||| |  |||||||||||| || ||||||||||||||||    
T  34186793 ttagagttgtgttatttgaacatccatacatgtgacaacttttgtgacaatcaaaattttgc--aaaggaaatgaggtagtgacacaaaaaccaaa 34186700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 4054174 - 4054264
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| |||||| ||| |||||||||||||||||||| |||||  ||| |||||||| || ||||||||||||||||    
T  4054174 gagttgtgttatttgaacatttatatatgtgacaacttttgtgacaatcaaaactttac--aaatgaaatgaggtagtgacacaaaaaccaaa 4054264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 7272033 - 7271943
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||| ||||||| |||| || ||| |||||||||||||||||||||||| |||||  ||||||||||| ||||||||||||||||    
T  7272033 gagttgtgttatatgaacatccatacatgtgacaacttttgtgacaatcaaaattttgcaaaa--gaaatgagatagtgacacaaaaaccaaa 7271943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 36251518 - 36251425
Alignment:
Q  122 ttatgtttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaa 217  Q
    ||||||||| || | |||||||||||||| ||||||| |||||||||| |||||||||||||||||||  |||||||||||| || ||||||||||    
T  36251518 ttatgtttaaagctctgttatttgaacatccatatatgtgataactttcgtgacaatcaaaattttac--aaaggaaatgaggtagtgacacaaaa 36251425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 12898816 - 12898907
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||| |||||||||||||| ||||||| ||| |||||||||||||| |||||||||||  ||||||||||||||| || | |||||||||||    
T  12898816 agagttatgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgagatagtggcgcaaaaaccaaa 12898907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 27325942 - 27325851
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||| ||| |||||| |||| ||||||||||||||  |||||||||||| || || |||||||||||||    
T  27325942 agagttgtgttatttgaacatccatatatgtgacaactttcgtgataatcaaaattttac--aaaggaaatgaggtagtggcacaaaaaccaaa 27325851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 37449312 - 37449403
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||| || ||||||| ||||||||||||||| ||||||||||||||  |||||||||||| || |  |||||||||||||    
T  37449312 agagttgtgttatttgaatatccatatatgtgataacttttgtgataatcaaaattttac--aaaggaaatgaggtagtagcacaaaaaccaaa 37449403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 127 - 223
Target Start/End: Complemental strand, 29025447 - 29025353
Alignment:
Q  127 tttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||| ||||| ||| ||| ||| |||||||| ||||| |||||||||||  |||| ||||||| |||||||||||||||||||    
T  29025447 tttagagttgtgttatttaaacatccatttatatgacaacttttgggacaaccaaaattttac--aaagaaaatgaggtattgacacaaaaaccaaa 29025353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 42768387 - 42768297
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||| ||||||| |||||| |||||||||||  ||||||||||  ||||||||||||  | ||||||||||||||||    
T  42768387 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaactaaaattttac--aaaggaaatgaggcagtgacacaaaaaccaaa 42768297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 36660339 - 36660428
Alignment:
Q  132 agttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||| |||| || ||||||||||||||||||||||||||||  | |||| ||||||  ||||||||||| |||||||    
T  36660339 agttgtgttatttgaacatccataaatgtgataacttttgtgacaatcaaaatttt--ataaagaaaatgaagtattgacacaataaccaaa 36660428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 32501082 - 32501174
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||| ||||||||||||||||| ||||||| ||| || ||||||||||| |||||||||||  |||||||||||| || ||||||||||| ||||    
T  32501082 tagaattgtgttatttgaacatccatatatgtgagaatttttgtgacaaccaaaattttac--aaaggaaatgaggtagtgacacaaaaatcaaa 32501174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 11253428 - 11253520
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||| ||||||||||||  ||| || ||| |||||||||||| | |||||||||||  |||| ||||||| |||||||||||||||||||    
T  11253428 tagagttgtattatttgaacatctataaatatgacaacttttgtgacgaccaaaattttac--aaagaaaatgaggtattgacacaaaaaccaaa 11253520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 37133749 - 37133840
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||| ||||| ||| ||  ||| |||||||||||||| |||||||||||  |||| |||||| ||||||||||||||| ||||    
T  37133749 agagttgtgttattttaacatccatttagatgacaacttttgtgacaaccaaaattttac--aaagaaaatgatatattgacacaaaaatcaaa 37133840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 34639727 - 34639626
Alignment:
Q  120 ttttatgtttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    |||||| ||||||||| |||||||||||||| ||| ||  |||||| ||||| || ||||||||||||||||| |  ||||||| || |||||||| |||    
T  34639727 ttttatatttagagttatgttatttgaacatccatttacatgataatttttgagagaatcaaaattttacaaata--aaatgaggtagtgacacaataac 34639630  T
Q  220 caaa 223  Q
    ||||    
T  34639629 caaa 34639626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 5277393 - 5277473
Alignment:
Q  137 tgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    |||||||||||||| |||| || ||| || || ||||||||||||||||||||  |||||||||||| || ||||||||||||    
T  5277393 tgttatttgaacatccatacatgtgacaatttatgtgacaatcaaaattttac--aaaggaaatgaggtagtgacacaaaaac 5277473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 43397965 - 43397874
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||| ||||||| |||||||| |||| || ||| | |||||||||||| |||||||||||  |||| |||||||||| || |||||||||||||    
T  43397965 agagatgtgttaattgaacatccatacatgtgacagcttttgtgacaaccaaaattttac--aaagaaaatgagatagtggcacaaaaaccaaa 43397874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 22719623 - 22719562
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    |||||||||||||||||||  ||||||| ||| ||||||||||| || ||||||||||||||    
T  22719623 gagttgtgttatttgaacagccatatatgtgacaacttttgtgataaccaaaattttacaaa 22719562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 10692617 - 10692553
Alignment:
Q  128 ttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    |||||||||| |||||||||||| ||||||| ||  ||||| | |||||||||||||||||||||    
T  10692617 ttagagttgtattatttgaacatccatatatgtgtcaacttctctgacaatcaaaattttacaaa 10692553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 23754594 - 23754686
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||||||||||  | ||| ||| ||| ||||  |||| |||||||||||  |||| |||||||  ||||||||||||||||||||    
T  23754594 gagttgtgttatttgaacattattttatatgacaacctttgcaacaaccaaaattttac--aaagaaaatgagtgattgacacaaaaaccaaaac 23754686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 36816507 - 36816565
Alignment:
Q  134 ttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    |||||||||||||||||  |||||| ||| ||||||||||| |||||||||||| ||||    
T  36816507 ttgtgttatttgaacatctatatatgtgacaacttttgtgataatcaaaattttgcaaa 36816565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 7598891 - 7598800
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||||||||||||  ||| ||| |||||||| ||||| ||||||||   | | || |||| || |||||||| ||||||||||||    
T  7598891 gagttgtgttatttgaacattcaattatatgaaaacttttgagacaaccaaaattt---acatagaaaataaggtattgacataaaaaccaaaac 7598800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 32133505 - 32133445
Alignment:
Q  132 agttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    ||||||||||||||||||| ||| ||| |||||| ||||| || || ||||||||||||||    
T  32133505 agttgtgttatttgaacatccatttatatgataaattttgagataaccaaaattttacaaa 32133445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 10731690 - 10731639
Alignment:
Q  170 tgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||  |||||||||||  |||||||||||||| ||||    
T  10731690 tgtgacaatcaaaattttac--aaaggaaatgaagtattgacacaaaaatcaaa 10731639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 10839369 - 10839460
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||| ||||||||||||||| ||| | | |||||| ||||| |||||  ||||||||||  |||| |||| | |||||| |||||||||||||    
T  10839369 agagtagtgttatttgaacatccatttttatgataatttttgagacaactaaaattttac--aaagaaaattaaatattggcacaaaaaccaaa 10839460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 27854661 - 27854748
Alignment:
Q  136 gtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||||| |   |||||||||||  |||||| ||||||||||  |||| |||| | |||||| |||||||| ||||||    
T  27854661 gtgttatttgaacattcattttcatgataacttttaagacaattaaaattttac--aaagaaaattaaatattggcacaaaaatcaaaac 27854748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 24614202 - 24614294
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||  |||||||||||| || ||||||||||||||||    
T  24614202 tagagttgtgttatttgaacattcatatatgtgataacttttgtgataatcaaaattttac--aaaggaaatgaggtagtgacacaaaaaccaaa 24614294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 41989628 - 41989720
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||  ||||||| || || |||||||||||||    
T  41989628 gagttgtgttatttgaacatccatatatgtgataacttttgtgacaaccaaaattttacaaaaaaaaaatgaggtagtggcacaaaaaccaaa 41989720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 219
Target Start/End: Original strand, 41189427 - 41189517
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctg--ataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    |||||||||||||||||||||||||||||| ||  ||||||||| ||||||||||||||||||  |||||||||||| |||||||||||||||    
T  41189427 tagagttgtgttatttgaacattcatatatatgtgataacttttatgacaatcaaaattttac--aaaggaaatgaggtattgacacaaaaac 41189517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 3937010 - 3937101
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| |||| || ||| |||||||||||||| |||||||||  | |||||||||||| ||||| |||||||||||||    
T  3937010 agagttgtgttatttgaacatccatacatgtgacaacttttgtgacaaccaaaatttt--ataaaggaaatgaggtattggcacaaaaaccaaa 3937101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 38956506 - 38956596
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||  |||||||||||| || || |||||||| ||||    
T  38956506 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtagtggcacaaaaaacaaa 38956596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 25192804 - 25192897
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||||||| ||||||| || ||| ||||||||||||||  ||||||||||  |||| ||||||| || ||||||||||||||||||    
T  25192804 agagttgtgttatttgaatattcatacatgtgacaacttttgtgacaactaaaattttac--aaagaaaatgaggtagtgacacaaaaaccaaaac 25192897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 47391209 - 47391305
Alignment:
Q  127 tttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||| |||||||||| |||||||||||||||| | |||||||||  ||||||||| |||||  | ||||||||||| ||||||||||||||| ||||||    
T  47391209 tttaaagttgtgttagttgaacattcatatatgtaataacttttaagacaatcaatatttt--ataaaggaaatgaaatattgacacaaaaatcaaaac 47391305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 223
Target Start/End: Original strand, 40112838 - 40112932
Alignment:
Q  127 tttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||||| ||||||| | | ||||| | ||||||||||||||||||  ||||||||| || || || |||||||||||||    
T  40112838 tttagagttgtgttatttgaacatccatatatgtaacaacttctctgacaatcaaaattttac--aaaggaaataaggtagtggcacaaaaaccaaa 40112932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 223
Target Start/End: Complemental strand, 43025527 - 43025433
Alignment:
Q  127 tttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||| ||||||  |||||| ||| ||||||||| ||||  ||||||||||  ||||||||||||||| || |||||||||||||    
T  43025527 tttagagttgtgttattcgaacatctatatatgtgacaacttttgtaacaactaaaattttac--aaaggaaatgagatagtggcacaaaaaccaaa 43025433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 44895460 - 44895550
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||| |||||||||||||| ||||||| | | |||||||||||||| |||||||||||  |||||||||||| || || |||||||||||||    
T  44895460 gagttatgttatttgaacatccatatatgtaacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtagtggcacaaaaaccaaa 44895550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 32529745 - 32529834
Alignment:
Q  132 agttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||| ||| ||||||| ||| || |||||||||||||||||||||||  |||||||||||| || ||| | ||||||||||    
T  32529745 agttgtgttatttgagcatccatatatgtgacaatttttgtgacaatcaaaattttac--aaaggaaatgaggtagtgataaaaaaaccaaa 32529834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 43942816 - 43942754
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||| ||| ||||||||||||||    
T  43942816 agagttgtgttatttgaacatccatatatgtgataatttttgtggcaaccaaaattttacaaa 43942754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 44189202 - 44189288
Alignment:
Q  134 ttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||| | ||||||| ||| |||||||||||||||||||||||| ||| |  |||||||||||| || ||||||||||||||||    
T  44189202 ttgtgttatttca-cattcatgtatgtgataacttttgtgacaatcaaaaattttc--aaaggaaatgagttagtgacacaaaaaccaaa 44189288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 46022154 - 46022241
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||| ||||| |||||||||  | |||| ||||||| |||||||||||||||    
T  46022154 agagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaatttt--ataaagaaaatgaggtattgacacaaaaac 46022241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 22918057 - 22918147
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||| |||||||| ||| |||| || ||| |||||||| |||||||||||||||||  |||||||||||| || || |||||||||||||    
T  22918057 gagttgtattatttgagcatccatacatgtgacaacttttgcgacaatcaaaattttac--aaaggaaatgaggtagtggcacaaaaaccaaa 22918147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 48062241 - 48062148
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||||||| | | |   |||||| ||||| |||||||||||||||| ||| |  ||||||| |||||||||||||||||||||    
T  48062241 agagttgtgttatttgaacatccgtttgagtgataatttttgagacaatcaaaattttataaaga--aaatgaggtattgacacaaaaaccaaaac 48062148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 7701728 - 7701641
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||| ||||| |||| ||||  | |||| ||||||| |||||||||||||||    
T  7701728 agagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaagtttt--ataaagaaaatgaggtattgacacaaaaac 7701641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 38944979 - 38944919
Alignment:
Q  132 agttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    ||||||||||||| ||||||||| ||| ||| |||||||  ||||||||||||||||||||    
T  38944979 agttgtgttatttaaacattcatttatatgacaacttttaagacaatcaaaattttacaaa 38944919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 31445503 - 31445411
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||||   | ||| |||||| |||||  ||||||||||||||||  |||| |||||||  ||||||||||||| ||||    
T  31445503 tagagttgtgttatttgaacatcattttatatgataatttttgcaacaatcaaaattttac--aaagaaaatgagtgattgacacaaaaatcaaa 31445411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 35072248 - 35072340
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||| ||||||| ||| ||| ||| ||||||||  |||| |||||||||  | |||| |||||||| ||||||||||||| ||||    
T  35072248 tagagttgtgttatctgaacatccatttatatgacaacttttgaaacaaccaaaatttt--ataaagaaaatgagacattgacacaaaaatcaaa 35072340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 3614330 - 3614395
Alignment:
Q  127 tttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    ||||||||| |||||||||||||| ||| ||| ||| ||||||||  |||| ||||||||||||||    
T  3614330 tttagagttatgttatttgaacatccatttatatgacaacttttgaaacaaccaaaattttacaaa 3614395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 40417957 - 40417867
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||  || |||  || |||||||| ||||| |||||||||||  |||| || |||| |||||||| ||||||||||    
T  40417957 gagttgtgttatttgaacatctatttatacgacaacttttgagacaaccaaaattttac--aaagaaagtgaggtattgacataaaaaccaaa 40417867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 46578023 - 46578113
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||| |||||||||||| ||||||| |||||| || | |||||| |||||||||| ||||  |||| ||| ||||| |||||||| ||||    
T  46578023 gagttgtcttatttgaacatccatatatgtgataatttctatgacaaccaaaattttataaaa--gaaacgaggtattggcacaaaaatcaaa 46578113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 38347730 - 38347666
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataa-cttttgtgacaatcaaaattttacaaa 192  Q
    |||||||||||||||||||||| ||| ||||| ||||  ||||| || |||||||||||||||||    
T  38347730 tagagttgtgttatttgaacatacatttatctaataattttttgagataatcaaaattttacaaa 38347666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 35098589 - 35098681
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||| || ||| ||| ||| ||||||||  |||| |||||||||  | | || |||||||| ||||||||||||| ||||    
T  35098589 tagagttgtgttatttgaatatccatttatatgacaacttttgaaacaaccaaaatttt--atatagaaaatgagacattgacacaaaaatcaaa 35098681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 38073364 - 38073313
Alignment:
Q  170 tgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||| ||||||||||||||  ||||||||| ||||| |||||||||||||    
T  38073364 tgtgacaaccaaaattttacaaa--ggaaatgaggtattggcacaaaaaccaaa 38073313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 224
Target Start/End: Original strand, 39155011 - 39155104
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaa 224  Q
    |||||| ||||||||||||| |||| ||  |||||||||||| || || || |||||||||||||  ||| ||| |||| | |||||||||||||    
T  39155011 agagttatgttatttgaacagtcatttaattgataacttttgggataa-cataattttacaaaaaaaaaaagaggtattaatacaaaaaccaaaa 39155104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 32803870 - 32803813
Alignment:
Q  133 gttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttaca 190  Q
    |||||||||||||||||| ||| ||| ||| ||||||||  ||||| |||||||||||    
T  32803870 gttgtgttatttgaacatccatttatatgacaacttttgaaacaattaaaattttaca 32803813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 42553078 - 42552989
Alignment:
Q  134 ttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||  ||| ||  |||||||||||| || || || ||||||||  |||| ||| ||| ||||| |||||||||||||||    
T  42553078 ttgtgttatttgaacaaccatttaattgataacttttgagaaaaccataattttac--aaagaaaaagaggtattggcacaaaaaccaaaac 42552989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 41195769 - 41195677
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||||||||||| | | |||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  41195769 tagagttgtgttatttgaacattcatatatgtaacaacttttgtgacaaccaaaattttac--aaaggaaatgagatattgacacaaaaaccaaa 41195677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 22888704 - 22888795
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||  |||||||||||| ||||| |||||||||||||    
T  22888704 agagttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttac--aaaggaaatgaggtattggcacaaaaaccaaa 22888795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 6049236 - 6049323
Alignment:
Q  134 ttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||  |||||||||||| ||||| |||||||||||||    
T  6049236 ttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttac--aaaggaaatgaggtattggcacaaaaaccaaa 6049323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 9647316 - 9647225
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||  |||||||||||  || ||||||||||||||||    
T  9647316 agagttgtgttatttgaacattcatatatgcgataacttttgtgacaaccaaaattttac--aaaggaaatgaagtagtgacacaaaaaccaaa 9647225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 18254096 - 18254187
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||  ||||||||||||||| || |||||||||||||    
T  18254096 agagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgagatagtggcacaaaaaccaaa 18254187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 37737858 - 37737949
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||| | ||||||| ||| |||||||||||||| ||||| |||||  ||||||||||||||||||||||||||| ||||    
T  37737858 agagttgtgttatttgaacgtccatatatgtgacaacttttgtgacaaccaaaactttac--aaaggaaatgagatattgacacaaaaatcaaa 37737949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 9194425 - 9194332
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||||||||||||||| | | || ||||||||||| |||||||||||||||  |||||||| || || |||||||||||||||    
T  9194425 agagttgtgttatttgaacattcatatatgtaacaatttttgtgacaaccaaaattttacaaaa--gaaatgaggtaatggcacaaaaaccaaaac 9194332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 1248870 - 1248779
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||| ||| ||||||||||  |||||||||||| || || |||||||||||||    
T  1248870 agagttgtgttatttgaacatccatatatgtgacaacttttgtgataattaaaattttac--aaaggaaatgaggtagtggcacaaaaaccaaa 1248779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 9990875 - 9990813
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||    
T  9990875 agagttgtgttatttgaacatccatatatgtgataacttttgtgacaattaaaattttacaaa 9990813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 19633466 - 19633375
Alignment:
Q  131 gagttgtgttatttgaacattcatatatct-gataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||| ||||||||||||| |||||| | |||||||||||||||||||||||||||||  |||||||||||| || ||| ||||||||||||    
T  19633466 gagttgtattatttgaacatttatatatgttgataacttttgtgacaatcaaaattttac--aaaggaaatgaggtagtgatacaaaaaccaaa 19633375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 19830367 - 19830276
Alignment:
Q  131 gagttgtgttatttgaacattcatatatct-gataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||| ||||||||||||| |||||| | |||||||||||||||||||||||||||||  |||||||||||| || ||| ||||||||||||    
T  19830367 gagttgtattatttgaacatttatatatgttgataacttttgtgacaatcaaaattttac--aaaggaaatgaggtagtgatacaaaaaccaaa 19830276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 32477516 - 32477425
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||| ||  |||||||||||| |||| | ||||||| ||||    
T  32477516 agagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaatttgac--aaaggaaatgaggtattcatacaaaaatcaaa 32477425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 42421785 - 42421876
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||  | |||||||||||| || || |||||| ||||||    
T  42421785 agagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaatttt--agaaaggaaatgaggtagtggcacaaacaccaaa 42421876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 43487563 - 43487472
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||| ||| || |||||| |||| |||||||||||  |||||||||||| || ||||||||||||||||    
T  43487563 agagttgtgttatttgaacatccatatatgtgacaatttttgtaacaaccaaaattttac--aaaggaaatgaggtagtgacacaaaaaccaaa 43487472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 132 - 223
Target Start/End: Complemental strand, 9207772 - 9207683
Alignment:
Q  132 agttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||  |||||| |||||| ||||||||||| |||||||||||  |||||||||||| || || |||||||||||||    
T  9207772 agttgtgttatttgaacatctatatatgtgataatttttgtgacaaccaaaattttac--aaaggaaatgaggtagtggcacaaaaaccaaa 9207683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 2076753 - 2076662
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||  ||| || ||| |||||||||||||| |||||||||||  |||| ||||||| |||||||||||||| ||||    
T  2076753 agagttgtgttatttgaacatcaatagatgtgacaacttttgtgacaaccaaaattttac--aaagaaaatgaggtattgacacaaaaatcaaa 2076662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 41042438 - 41042347
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||| |||||||||||||| ||||||| ||| || |||| |||||| |||||||||  | ||||||||||||||||||||| ||||||||||    
T  41042438 agagttctgttatttgaacatccatatatgtgacaatttttatgacaaccaaaatttt--ataaaggaaatgagatattgacataaaaaccaaa 41042347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 27490611 - 27490679
Alignment:
Q  124 atgtttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    ||||||||||||||||||||||||||| ||| |   ||| |||||||||||||||||||||||||||||    
T  27490611 atgtttagagttgtgttatttgaacatccattttgatgacaacttttgtgacaatcaaaattttacaaa 27490679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 21611542 - 21611604
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    ||||||||||||||||||||| ||||||| ||| ||||||| |||||| ||||||||||||||    
T  21611542 agagttgtgttatttgaacatccatatatgtgacaacttttatgacaaccaaaattttacaaa 21611604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 34944979 - 34945068
Alignment:
Q  132 agttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||| ||||| |||||||||| ||| |||||| ||||||| |||||||||||||||  |||||||| || || |||||||| ||||    
T  34944979 agttgtgttaattgaatattcatatatgtgacaactttcgtgacaaccaaaattttacaaaa--gaaatgaggtagtggcacaaaaatcaaa 34945068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 41056636 - 41056721
Alignment:
Q  132 agttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    ||||||||||||||||||| ||| ||| ||| |||||||| ||||| |||||||||  | |||| ||||||| |||||||||||||||    
T  41056636 agttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaatttt--ataaagaaaatgaggtattgacacaaaaac 41056721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 3838768 - 3838860
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||||||  |||||| ||| ||||||||||| ||| ||||||||||  |||||||||||   | ||||||||||| ||||||    
T  3838768 gagttgtgttatttgaacatctatatatgtgacaacttttgtgataattaaaattttac--aaaggaaatgaagcagtgacacaaaaatcaaaac 3838860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 3097748 - 3097835
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||| ||||| |||||||||  | |||| ||||||| |||| ||||||||||    
T  3097748 agagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaatttt--ataaagaaaatgagttatttacacaaaaac 3097835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 25270469 - 25270556
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    ||||||||||||||||||||| ||| ||| ||| |||||| | ||||| |||||||||  | |||| ||||||| |||||||||||||||    
T  25270469 agagttgtgttatttgaacatccatttatatgacaactttcgagacaaccaaaatttt--ataaagaaaatgaggtattgacacaaaaac 25270556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 9760202 - 9760145
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaatttt 187  Q
    |||||||||||||||||||||  |||||| ||| |||||||||||||| |||||||||    
T  9760202 agagttgtgttatttgaacatctatatatgtgacaacttttgtgacaaccaaaatttt 9760145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 8848584 - 8848646
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    |||||||||||||||||||||  || ||  |||||| ||||||||||||||||||||| ||||    
T  8848584 agagttgtgttatttgaacatctatttagatgataatttttgtgacaatcaaaattttgcaaa 8848646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 13333057 - 13333144
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    |||||||||||||||||||||  || ||| ||| |||||||| ||||| |||||||||  | |||| ||||||  |||||||||||||||    
T  13333057 agagttgtgttatttgaacatcgatttatatgacaacttttgagacaaccaaaatttt--ataaagaaaatgatgtattgacacaaaaac 13333144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 7698354 - 7698293
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    ||||||||||||| ||||||  ||| || ||||||||||||||| ||| |||||||||||||    
T  7698354 gagttgtgttattagaacatctatacatgtgataacttttgtgataattaaaattttacaaa 7698293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 42091393 - 42091482
Alignment:
Q  134 ttgtgttatttgaacattcatatatctg--ataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||  |||||| ||  | || ||||||||||| |||||||||||  |||||||| ||| || ||||||||||||||||    
T  42091393 ttgtgttatttgaacatctatatatatgtgacaatttttgtgacaaccaaaattttac--aaaggaaacgaggtagtgacacaaaaaccaaa 42091482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 29349688 - 29349628
Alignment:
Q  132 agttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    |||| |||||||| ||||| ||| ||  ||| |||||||||||||||||||||||||||||    
T  29349688 agttatgttatttcaacatccatttagatgacaacttttgtgacaatcaaaattttacaaa 29349628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 31415093 - 31415004
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaa 222  Q
    ||||||| ||||||||||| |||| |   |||||||||||| ||||| || |||||||  ||||| ||  ||||||||||||||||||||||    
T  31415093 gagttgtattatttgaacaatcattttattgataacttttgagacaaccataatttta--aaaagaaagagagatattgacacaaaaaccaa 31415004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 39147945 - 39147857
Alignment:
Q  135 tgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||||  ||| |   ||| |||||||| |||||||| || ||||||||||  ||||||| |||||||||||||| ||||||    
T  39147945 tgtgttatttgaacaaccattttaatgacaacttttgggacaatcataaatttacaaaaa--aaatgaggtattgacacaaaaatcaaaac 39147857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 6511395 - 6511344
Alignment:
Q  170 tgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||| |||  ||||||||| || ||||||||||||||||    
T  6511395 tgtgacaatcaaaattttataaa--ggaaatgaggtagtgacacaaaaaccaaa 6511344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 17388530 - 17388580
Alignment:
Q  170 tgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaa 222  Q
    ||||||||||||||||||||  |||||||||||| || || ||||||||||||    
T  17388530 tgtgacaatcaaaattttac--aaaggaaatgaggtagtggcacaaaaaccaa 17388580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 18846796 - 18846731
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaa 194  Q
    ||||||| |||||||||||||| ||| ||  ||| || |||| |||||||||||||||| ||||||    
T  18846796 tagagttatgttatttgaacatccatttagatgacaatttttatgacaatcaaaattttgcaaaaa 18846731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 136110 - 136047
Alignment:
Q  128 ttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaa 194  Q
    ||||||||||||||||||||||| ||| |||   || ||||||| |||||  |||||||||||||||    
T  136110 ttagagttgtgttatttgaacatccatttat---atgacttttgagacaactaaaattttacaaaaa 136047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 2e-29; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 1671735 - 1671633
Alignment:
Q  121 tttatgtttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaacc 220  Q
    |||||| | ||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||  |||||||||||| || |||||||||||||    
T  1671735 tttatggtaagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttac--aaaggaaatgaggtactgacacaaaaacc 1671638  T
Q  221 aaaac 225  Q
    |||||    
T  1671637 aaaac 1671633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 132 - 223
Target Start/End: Complemental strand, 13168704 - 13168615
Alignment:
Q  132 agttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||  ||||||||||||||| || |||||||||||||    
T  13168704 agttgtgttatttcaacattcatatatgtgacaacttttgtgacaatcaaaattttac--aaaggaaatgagatagtggcacaaaaaccaaa 13168615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 7287077 - 7287169
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||  |||| ||||||| || ||||||||||||||||||    
T  7287077 gagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttac--aaagaaaatgaggtagtgacacaaaaaccaaaac 7287169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 36739132 - 36739041
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||||||| |||||||||||||||  |||||||| || ||||||||||||||||    
T  36739132 agagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaaa--gaaatgaggtagtgacacaaaaaccaaa 36739041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 8687075 - 8686982
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||| ||||||||||||||||||||||| ||| ||||||| | ||||||||||||||||  |||| ||||||| |||||||||||||||||||||    
T  8687075 agagtagtgttatttgaacattcatatatgtgacaacttttataacaatcaaaattttac--aaagaaaatgaggtattgacacaaaaaccaaaac 8686982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 18258680 - 18258771
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||  |||||||||||| || || |||||||||||||    
T  18258680 agagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtagtggcacaaaaaccaaa 18258771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 26791131 - 26791222
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||  |||||||||||| || || |||||||||||||    
T  26791131 agagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgagttagtggcacaaaaaccaaa 26791222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 33037703 - 33037613
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||  |||||||||||| || ||||||||||| ||||    
T  33037703 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtagtgacacaaaaatcaaa 33037613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 41321438 - 41321348
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||| || ||||||| ||| || ||||||||||| |||||||||||  |||||||||||| |||||||||||||||||||    
T  41321438 gagttgtgttatttgaatatccatatatgtgacaatttttgtgacaaccaaaattttac--aaaggaaatgaggtattgacacaaaaaccaaa 41321348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 15479657 - 15479560
Alignment:
Q  126 gtttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||| |||||||||||||||||||| |||| || ||| ||||||||||||||| |||||||||||||||  ||||||| |||||||| || |||||||||    
T  15479657 gttttgagttgtgttatttgaacatccataaatgtgacaacttttgtgacaattaaaattttacaaaaa--aaatgaggtattgacaaaataaccaaaac 15479560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 1274541 - 1274451
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||| ||| ||||||| || ||| |||||||||||  ||||| ||||||||||||||||||||||||||    
T  1274541 agagttgtgttatttgaacatccatatatgtgacaacttttatg-caaccaaaattttac--aaagggaatgagatattgacacaaaaaccaaa 1274451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 2972504 - 2972417
Alignment:
Q  134 ttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||||||||||  ||  ||||||||||| |||||||||||||| ||||    
T  2972504 ttgtgttatttgaacatttatatatgtgacaacttttgtgacaatcaaaattt--cacgaaggaaatgaggtattgacacaaaaatcaaa 2972417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 5168371 - 5168305
Alignment:
Q  126 gtttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||  |||||||||||||    
T  5168371 gtttagagttgtgttatttgaacattcatatatatgacaacttttgtgacaactaaaattttacaaa 5168305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 14051201 - 14051295
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||||  ||||| ||||||| |||||||||||||||||| |||||||||||  |||| ||||||| || || |||||||||||||||    
T  14051201 tagagttgtgttattcaaacatccatatatgtgataacttttgtgacaaccaaaattttac--aaagaaaatgaggtagtggcacaaaaaccaaaac 14051295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 132 - 223
Target Start/End: Complemental strand, 1764406 - 1764317
Alignment:
Q  132 agttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||  | |||||||||||| || || || ||||||||||    
T  1764406 agttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaatttt--agaaaggaaatgaggtagtggcataaaaaccaaa 1764317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 28467340 - 28467433
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||| ||||||||||||||| ||| || ||||||||||| |||||||||  | ||||||||||||  | ||||||||||||||||||    
T  28467340 agagttgtgttatctgaacattcatatatgtgacaatttttgtgacaaccaaaatttt--ataaaggaaatgaggcagtgacacaaaaaccaaaac 28467433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 7076464 - 7076546
Alignment:
Q  139 ttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||| ||| |||||||||||||| |||||||||||  |||||||||||  || || |||||||||||||    
T  7076464 ttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgaagtaatggcacaaaaaccaaa 7076546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 28306020 - 28306081
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||| ||||||||||||||    
T  28306020 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaa 28306081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 35634722 - 35634816
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||||||| ||||||| ||| ||||||| ||| || ||||||||||| ||| | ||||||  ||||| |||||||||||||||    
T  35634722 agagttgtgttatttgaacatccatatatgtgacaacttttatgataaccaaaattttac-aaaggaaaatgaattattggcacaaaaaccaaaac 35634816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 17626170 - 17626083
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||| ||||| |||||||||  | |||| ||||||| |||||||||||||||    
T  17626170 agagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaatttt--ataaagaaaatgaggtattgacacaaaaac 17626083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 14923256 - 14923166
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||  |||||| ||| |||||| |||| || |||||||||||||||  |||||||| || || |||||||||||||    
T  14923256 gagttgtgttatttgaacatcgatatatgtgacaactttcgtgaaaaccaaaattttacaaaa--gaaatgaggtagtggcacaaaaaccaaa 14923166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 18660941 - 18660852
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||| ||||| |||||||||||||| | ||||||||||| ||||||||| ||||||  |||||||||||  ||||| |||||||||||||    
T  18660941 gagttgtattattcgaacattcatatatgtcataacttttgt-acaatcaaacttttac--aaaggaaatgaagtattggcacaaaaaccaaa 18660852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 39591864 - 39591773
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||  || ||| ||| ||| |||||||||| |||| ||||||  |||| |||||||| ||||||||| ||||||||    
T  39591864 agagttgtgttatttgaacatctatttatatgacaacctttgtgacaaccaaagttttac--aaagaaaatgagagattgacacacaaaccaaa 39591773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 39592256 - 39592165
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||  || ||| ||| ||| |||||||||| |||| ||||||  |||| |||||||| ||||||||| ||||||||    
T  39592256 agagttgtgttatttgaacatctatttatatgacaacctttgtgacaaccaaagttttac--aaagaaaatgagagattgacacacaaaccaaa 39592165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 7552854 - 7552940
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaa 218  Q
    ||||||||||||||||||||| ||| ||  ||| |||||||||||||| ||||||||| |  |||| ||||||  ||||||||||||||    
T  7552854 agagttgtgttatttgaacatccatttagatgacaacttttgtgacaaccaaaattttgc--aaagaaaatgatgtattgacacaaaaa 7552940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 13310063 - 13309976
Alignment:
Q  134 ttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||| ||| ||  ||| || ||||| |||||||||| ||||||  |||| ||||||| |||| ||||||||||||||    
T  13310063 ttgtgttatttgaacatccatttagatgacaatttttgagacaatcaaatttttac--aaagaaaatgaggtattaacacaaaaaccaaa 13309976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 22972301 - 22972208
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||||||| ||| ||| | | |||||||| |||||  ||||||||||  |||| |||| || |||| | ||||||||||||||    
T  22972301 agagttgtgttatttgaacatccatttatataacaacttttgagacaactaaaattttac--aaagaaaataaggtattaatacaaaaaccaaaac 22972208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 39054768 - 39054709
Alignment:
Q  133 gttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    |||||||||||||||||| ||| ||  ||| ||||||||||| |||||||||||| ||||    
T  39054768 gttgtgttatttgaacatccatttagatgacaacttttgtgataatcaaaattttgcaaa 39054709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 42175107 - 42175045
Alignment:
Q  126 gtttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaatttta 188  Q
    ||||| |||||||||||||||||||  |||||| ||  ||||||| ||||| |||||||||||    
T  42175107 gtttaaagttgtgttatttgaacatcgatatatgtgtcaacttttatgacagtcaaaatttta 42175045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 155
Target Start/End: Original strand, 1079848 - 1079876
Alignment:
Q  127 tttagagttgtgttatttgaacattcata 155  Q
    |||||||||||||||||||||||||||||    
T  1079848 tttagagttgtgttatttgaacattcata 1079876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 3565270 - 3565206
Alignment:
Q  128 ttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    ||||||||||||||||||||||| ||  |   ||| |||||||| ||||| ||||||||||||||    
T  3565270 ttagagttgtgttatttgaacatccacttgagtgacaacttttgagacaaccaaaattttacaaa 3565206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 42475559 - 42475623
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaa 194  Q
    ||||||||||||||||||||  ||| ||| |||||| || || ||||||||||| |||| |||||    
T  42475559 agagttgtgttatttgaacaaccatttatgtgataatttatgggacaatcaaaaatttataaaaa 42475623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 4e-28; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 48470822 - 48470730
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||| |||| ||||||||||    
T  48470822 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttac--aaaggaaatgagatattggcacagaaaccaaaac 48470730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 19055646 - 19055739
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||||||  ||||||||||  |||||||||||||||||| |||||||||||||||    
T  19055646 agagttgtgttatttgaacatccatatatgtgacaacttttgtgacaactaaaattttac--aaaggaaatgagatattgtcacaaaaaccaaaac 19055739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 33100993 - 33100899
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||  | |||||||||||| || ||||||||||| ||||||    
T  33100993 tagagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaatttt--ataaaggaaatgaggtagtgacacaaaaatcaaaac 33100899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 3981914 - 3982006
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||||||||| |||| || ||| ||| ||||||||||||||||||||||  |||| ||||||||||||||||||| |||||||||    
T  3981914 gagttgtgttatttgaacatccataaatgtgacaacatttgtgacaatcaaaattttac--aaagaaaatgagatattgacacaataaccaaaac 3982006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 649953 - 649862
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| || |||| ||| |||||||||||||| |||||||||||  |||||||||||| || ||||||||||||||||    
T  649953 agagttgtgttatttgaacatccacatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtagtgacacaaaaaccaaa 649862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 26469542 - 26469455
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaacc 220  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||  |||||||||||| || |||||||||||||    
T  26469542 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtagtgacacaaaaacc 26469455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 27464944 - 27465035
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||  |||||||||||| || || |||||||||||||    
T  27464944 agagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtagtggcacaaaaaccaaa 27465035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 31088365 - 31088274
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||| ||||||||||||||||  ||||||| || || |||||||||||||    
T  31088365 agagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaaa--aaatgaggtagtggcacaaaaaccaaa 31088274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 43775386 - 43775297
Alignment:
Q  134 ttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||| |||||||||| ||| ||||||| ||||||||||||||||||  |||| |||||||||||||| |||||||| |||||    
T  43775386 ttgtgttatttgaatattcatatatgtgacaacttttatgacaatcaaaattttac--aaagaaaatgagatattgatacaaaaactaaaac 43775297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 130 - 224
Target Start/End: Complemental strand, 21401582 - 21401490
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaa 224  Q
    ||||||||||||||||||||| ||| ||| ||| ||||||||  ||||||||||||||||  |||| ||||||| ||||||||||||||||||||    
T  21401582 agagttgtgttatttgaacatccatttatgtgacaacttttgaaacaatcaaaattttac--aaagaaaatgaggtattgacacaaaaaccaaaa 21401490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 37274920 - 37275011
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| | || || ||| |||||||||||||||||||||||| |  |||||||||||| || ||||||||||||||||    
T  37274920 agagttgtgttatttgaacatccttacatgtgacaacttttgtgacaatcaaaattttgc--aaaggaaatgaggtagtgacacaaaaaccaaa 37275011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 45121368 - 45121458
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||  |||||||||||| || || |||||||||||||    
T  45121368 agagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgag-tagtggcacaaaaaccaaa 45121458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 37685512 - 37685422
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||| ||||||||||||||||||| || |||||| |||||||||||| ||||||||||||||  |||||||| || ||||||||||| ||||    
T  37685512 gagttatgttatttgaacattcatacatgtgataatttttgtgacaattaaaattttacaaaa--gaaatgaggtagtgacacaaaaatcaaa 37685422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 37700006 - 37700096
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||| ||||||||||||||||||| || |||||| |||||||||||| ||||||||||||||  |||||||| || ||||||||||| ||||    
T  37700006 gagttatgttatttgaacattcatacatgtgataatttttgtgacaattaaaattttacaaaa--gaaatgaggtagtgacacaaaaatcaaa 37700096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 44519039 - 44519129
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| || |||||||||||  |||||||||||| ||||  |||||||| ||||    
T  44519039 gagttgtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttac--aaaggaaatgaggtattagcacaaaaatcaaa 44519129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 23645595 - 23645502
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||| |||||||||||||| ||||||| | | |||||||||||||| |||||||||||  |||||||||||| || || |||||||||||||||    
T  23645595 agagttatgttatttgaacatacatatatgtaacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtagtggcacaaaaaccaaaac 23645502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 50932481 - 50932397
Alignment:
Q  137 tgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||| ||||||| ||| ||||||||| |||| |||||||||||  |||||||||||| |||||||||||||| ||||    
T  50932481 tgttatttgaacatccatatatgtgacaacttttgttacaaccaaaattttac--aaaggaaatgaggtattgacacaaaaatcaaa 50932397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 45333891 - 45333804
Alignment:
Q  134 ttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||  |||||| |||||| |||||||||||| ||||||||||  |||||||||||| || ||||||||||| ||||    
T  45333891 ttgtgttatttgaacatctatatatgtgataatttttgtgacaattaaaattttac--aaaggaaatgaggtagtgacacaaaaatcaaa 45333804  T

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Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 35369879 - 35369793
Alignment:
Q  135 tgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||| ||||||| ||| |||||||||||||| |||||||||  | |||||||||||| || ||||||||||| ||||    
T  35369879 tgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaatttt--ataaaggaaatgaggtagtgacacaaaaatcaaa 35369793  T

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Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 223
Target Start/End: Original strand, 52576186 - 52576280
Alignment:
Q  128 ttagagttgtgttatttgaaca-ttcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||| ||||||||  ||| |||||||||||||| |||||||||||  |||||||||||| ||  | |||||||||||||    
T  52576186 ttagagttgtgttatttgaacaattcatataggtgacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtaccggcacaaaaaccaaa 52576280  T

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Target: chr1; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 15469945 - 15470036
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||  | |||||||||||| || |  | |||||||||||||    
T  15469945 gagttgtgttatttgaacattcatatatgtgataa-ttttgtgacaattaaaatttt--ataaaggaaatgaggtagtagcgcaaaaaccaaaac 15470036  T

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Target: chr1; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 137 - 215
Target Start/End: Original strand, 26020970 - 26021046
Alignment:
Q  137 tgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaa 215  Q
    |||||||||||||||||| ||| ||| | |||||| ||||||||||||||||||||||  ||| |||||||||||||||    
T  26020970 tgttatttgaacattcatttatatgacatcttttgagacaatcaaaattttacaaaaa--aaaagagatattgacacaa 26021046  T

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Target: chr1; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 31827136 - 31827044
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||||  || ||  ||| ||||||||  |||| ||||||||||||||||  ||||||| |||||||||||||||||||    
T  31827136 tagagttgtgttatttgaacatctatttagatgacaacttttgatacaaccaaaattttacaaaaa--aaatgagttattgacacaaaaaccaaa 31827044  T

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Target: chr1; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 45640485 - 45640395
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||  |||||| ||| |||||||||  ||| ||||||||||||||   |||||||||||||| |||||||| ||||    
T  45640485 agagttgtgttatttgaacatctatatatgtgacaacttttgttgcaaccaaaattttacaaa---gaaatgagatattggcacaaaaatcaaa 45640395  T

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Target: chr1; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 50726136 - 50726228
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||| |  |||| ||||||| || || |||||||| ||||||    
T  50726136 gagttgtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttgc--aaagaaaatgaggtagtggcacaaaaatcaaaac 50726228  T

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Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 8350087 - 8350176
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||| ||||||| ||| |||||| ||||||| ||||||||   | ||||||||| || || ||||||||||||||||    
T  8350087 gagttgtgttatttgaacatccatatatgtgacaactttcgtgacaaccaaaattt---acaaaggaaataaggtagtgacacaaaaaccaaa 8350176  T

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Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 44914459 - 44914546
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataa-cttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    |||||||||||||||||||| ||||||| ||| ||  ||||| |||||||||||||||||  |||||||||||| || ||||||||||||    
T  44914459 gagttgtgttatttgaacatccatatatgtgacaattttttgcgacaatcaaaattttac--aaaggaaatgaggtagtgacacaaaaac 44914546  T

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Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 46907379 - 46907292
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    ||||||||||||||||||||| ||| |||  || |||||||| |||||||||||||||  | |||| ||||||| |||||||||||||||    
T  46907379 agagttgtgttatttgaacatccatttatacgacaacttttgagacaatcaaaatttt--ataaagaaaatgaggtattgacacaaaaac 46907292  T

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Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 3851335 - 3851249
Alignment:
Q  137 tgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||| ||||||| ||| ||||||| |||||| |||||||||  | |||||||||||| || ||||| ||||||||||||    
T  3851335 tgttatttgaacatccatatatgtgacaacttttatgacaaccaaaatttt--ataaaggaaatgaggtagtgacagaaaaaccaaaac 3851249  T

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Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 15082939 - 15083028
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||| ||||| |||||||||||||| | | ||||||||| ||||||||| |||||||||  ||||||||  |||||||||||||||||||    
T  15082939 gagttgtattattcgaacattcatatatgtcaaaacttttgt-acaatcaaacttttacaaa--ggaaatgaagtattgacacaaaaaccaaa 15083028  T

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Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 30570711 - 30570646
Alignment:
Q  127 tttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    |||| ||||||||||||||||||||||| ||| |||||| |||||  |||||||||||||||||||    
T  30570711 tttaaagttgtgttatttgaacattcatttatatgataatttttgaaacaatcaaaattttacaaa 30570646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 37619727 - 37619642
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaa 218  Q
    ||||| |||||||||||||| ||||||| ||| ||||||| | |||| |||||||||||  |||||||||||| ||||| ||||||||    
T  37619727 gagttatgttatttgaacatccatatatgtgacaacttttattacaaccaaaattttac--aaaggaaatgaggtattggcacaaaaa 37619642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 2571819 - 2571733
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaa 218  Q
    |||||||||||||||||||| |||  || ||| |||||||||||||| |||||||||| | |||| ||||||| || |||||||||||    
T  2571819 gagttgtgttatttgaacatccatgcatatgacaacttttgtgacaaccaaaatttta-acaaagaaaatgaggtagtgacacaaaaa 2571733  T

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Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 30735179 - 30735238
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaatttta 188  Q
    ||||||||||||||||||| || ||| ||| |||||| ||||||||||||||||||||||    
T  30735179 tagagttgtgttatttgaatatccatgtatgtgataatttttgtgacaatcaaaatttta 30735238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 9566847 - 9566938
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||||||  ||| ||| |||||||| ||||| |||||||||||  | || ||||  | |||||||||||||||||||    
T  9566847 agagttgtgttatttgaacattcaattatatgacaacttttgagacaaccaaaattttac--atagaaaatagggtattgacacaaaaaccaaa 9566938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 49647035 - 49647130
Alignment:
Q  127 tttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||| |||||||||||||||||| ||| ||| ||||||||  ||||  |||||||||  |||   ||| ||| |||||||||||||||||||||    
T  49647035 tttagagttatgttatttgaacattcatttatatgacaacttttgaaacaactaaaattttatgaaa---aaacgagttattgacacaaaaaccaaaac 49647130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 50149130 - 50149039
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||   | ||| ||| ||||||||  ||||||||||||||||  |||| ||||||   ||||||||||||||||||    
T  50149130 agagttgtgttatttgaacatcattttatatgacaacttttgcaacaatcaaaattttac--aaagaaaatgattgattgacacaaaaaccaaa 50149039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 19947632 - 19947689
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaatttta 188  Q
    ||||||||||||||||||||| || ||| ||| |||||||| ||||| ||||||||||    
T  19947632 gagttgtgttatttgaacatttatttatatgacaacttttgagacaaccaaaatttta 19947689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 223
Target Start/End: Original strand, 40861154 - 40861240
Alignment:
Q  135 tgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||  |||||| ||  ||||||||||||||  ||||||||  | ||||||||| ||||| || |||||||||||||    
T  40861154 tgtgttatttgaacatctatatatgtgtcaacttttgtgacaactaaaatttt--ataaaggaaataagatagtggcacaaaaaccaaa 40861240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 6693301 - 6693248
Alignment:
Q  170 tgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||| |||||||||||||||||  ||||||||| |||||||| ||||||||||||    
T  6693301 tgtgataatcaaaattttacaaa--ggaaatgaggtattgacataaaaaccaaaac 6693248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 165
Target Start/End: Complemental strand, 6693328 - 6693294
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataa 165  Q
    |||||||||||||||||||||||||||| ||||||    
T  6693328 gagttgtgttatttgaacattcatatatgtgataa 6693294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 26208024 - 26207963
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    ||||||||||||||||||||  || ||  | ||||||||||||| |||||||||||| ||||    
T  26208024 gagttgtgttatttgaacatctatttagattataacttttgtgataatcaaaattttgcaaa 26207963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 18434979 - 18434886
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||||||| ||  || ||  ||| |||||||||||||| ||||||||| |  |||| ||||||  ||||| |||||||| ||||||    
T  18434979 agagttgtgttatttgaaaatctatttagatgacaacttttgtgacaaccaaaattttgc--aaagaaaatgatgtattggcacaaaaatcaaaac 18434886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 29359809 - 29359781
Alignment:
Q  130 agagttgtgttatttgaacattcatatat 158  Q
    |||||||||||||||||||||||||||||    
T  29359809 agagttgtgttatttgaacattcatatat 29359781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 51137547 - 51137624
Alignment:
Q  139 ttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaa 218  Q
    ||||||||| ||| || ||| ||||||  ||||||| || |||||||||||||| ||  ||||||||||||||| |||||    
T  51137547 ttatttgaatatttatttatatgataatatttgtgataaacaaaattttacaaagag--aatgagatattgacataaaaa 51137624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 223
Target Start/End: Complemental strand, 1156912 - 1156813
Alignment:
Q  122 ttatgtttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaacca 221  Q
    |||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    ||||||||||||||| || |||||||||||    
T  1156912 ttatttttagagttgtgttatttgaacatccatatatttgataacttttgtgacaatcaaaatttt--gtaaaggaaatgagatagtggcacaaaaacca 1156815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 33430249 - 33430340
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||| |||||||||||| ||| |||||||||||||| |||||||||||  |||||||||||| || ||||||||||||||||    
T  33430249 agagttgtgttatttggacattcatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtagtgacacaaaaaccaaa 33430340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 32316814 - 32316906
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||  |||| ||||||| || ||||||||||||||||    
T  32316814 tagagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttac--aaagaaaatgaggtactgacacaaaaaccaaa 32316906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 552976 - 552886
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||  |||||||||||| || || |||||||||||||    
T  552976 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtagtggcacaaaaaccaaa 552886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 14818115 - 14818023
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||||||| |||||| ||| |||||||||||||| |||||||||  | |||||||||||| || || |||||||||||||||    
T  14818115 gagttgtgttatttgaacatttatatatatgacaacttttgtgacaaccaaaatttt--agaaaggaaatgaggtagtggcacaaaaaccaaaac 14818023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 31077977 - 31077885
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||| ||||||| || ||| |||||||||||||| |||||||||||  ||||||| |||| || ||||||||||||||||||    
T  31077977 gagttgtgttatttgaatattcatacatgtgacaacttttgtgacaaccaaaattttac--aaaggaagtgaggtagtgacacaaaaaccaaaac 31077885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 5694039 - 5694131
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||| ||||||||| ||| ||| |||||||| ||||| | |||||||||  |||||||||||| |||||||||||||| ||||||    
T  5694039 gagttgtgttatttaaacattcatgtatgtgacaacttttgagacaacctaaattttac--aaaggaaatgaggtattgacacaaaaatcaaaac 5694131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 15974792 - 15974701
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||| | | |||||||||||||| |||||||||||  |||||||||||  || | ||||||||||||||    
T  15974792 agagttgtgttatttgaacatccatatatgtaacaacttttgtgacaaccaaaattttac--aaaggaaatgaagtagtaacacaaaaaccaaa 15974701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 18737460 - 18737547
Alignment:
Q  136 gtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||| ||| ||| ||| |||||||||||||| |||||||||||  |||| ||||||| ||||| |||||||||||||||    
T  18737460 gtgttatttgaacatccatgtatgtgacaacttttgtgacaaccaaaattttac--aaagaaaatgaggtattgtcacaaaaaccaaaac 18737547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 26595533 - 26595442
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||| ||| ||| ||||||||  |||| |||||||||||  |||| ||||||| |||||||||||||||||||    
T  26595533 agagttgtgttatttgaacatccatttatatgacaacttttgaaacaaccaaaattttac--aaagaaaatgaggtattgacacaaaaaccaaa 26595442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 34047571 - 34047480
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||| |||||||||||||| |||| || ||| |||||||||||||| |||||||||||  |||| ||| ||||||||| |||||||||||||    
T  34047571 agagttttgttatttgaacatccataaatgtgacaacttttgtgacaaccaaaattttac--aaagaaaaagagatattggcacaaaaaccaaa 34047480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 16199634 - 16199547
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||| ||||| |||||||||  | |||| ||||||| |||||||||||||||    
T  16199634 agagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaatttt--ataaagaaaatgaggtattgacacaaaaac 16199547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 11612370 - 11612310
Alignment:
Q  132 agttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    |||||||||||||||| ||| |||||| |||||| |||||||| |||||||||||||||||    
T  11612370 agttgtgttatttgaatatttatatatgtgataatttttgtgataatcaaaattttacaaa 11612310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 4820551 - 4820460
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||   || ||  |||||||||||| |||||||||||||||||  |||| |||||||  ||||||||||||| ||||    
T  4820551 agagttgtgttatttgaacaactatttacatgataacttttgagacaatcaaaattttac--aaagaaaatgaggcattgacacaaaaatcaaa 4820460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 277174 - 277084
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||| ||||||| | ||  ||| || ||||||||||| |||||||||||  |||| |||||| ||||||||||||||| ||||    
T  277174 gagttgtgttatttaaacattcctttagatgacaatttttgtgacaaccaaaattttac--aaagaaaatgatatattgacacaaaaatcaaa 277084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 13689882 - 13689972
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||| ||||||| ||| || ||||  |||||  ||||||||  | |||||||||||| |||||||||||||| ||||    
T  13689882 gagttgtgttatttgaacatccatatatgtgacaatttttacgacaactaaaatttt--ataaaggaaatgaggtattgacacaaaaatcaaa 13689972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 3853206 - 3853285
Alignment:
Q  142 tttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||| ||| ||| |||||||| |||||  || |||||||||| |  |||||||||||||||||||||| ||||    
T  3853206 tttgaacattcatttatatgacaacttttgagacaacaaagattttacaaaga--aaatgagatattgacacaaaaatcaaa 3853285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 22079451 - 22079541
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||| ||| ||  |||  ||||||||||||| ||||||||| |  |||| ||||||  |||||||||||||| ||||    
T  22079451 gagttgtgttatttgaacatccatttagatgaccacttttgtgacaaccaaaattttgc--aaagaaaatgatgtattgacacaaaaatcaaa 22079541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 30457690 - 30457596
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||| || ||||| ||| ||| ||| |||||||| || || |||||||| ||| | |  ||||||| |||||||||||||||||||||    
T  30457690 tagagttgtgttaattcaacatccatttatatgacaacttttgagataaccaaaatttcacataga--aaatgaggtattgacacaaaaaccaaaac 30457596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 2241917 - 2242003
Alignment:
Q  134 ttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||| ||| | ||  |||||||||||||||||| ||||||  |||  |||| |||||||  ||||||||||||||||||    
T  2241917 ttgtgttatttgaactttctt-tacatgataacttttgtgacaaccaaaataatac--aaagaaaatgaggcattgacacaaaaaccaaa 2242003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 158
Target Start/End: Original strand, 8098495 - 8098524
Alignment:
Q  129 tagagttgtgttatttgaacattcatatat 158  Q
    ||||||||||||||||||||||||||||||    
T  8098495 tagagttgtgttatttgaacattcatatat 8098524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 30423434 - 30423491
Alignment:
Q  125 tgtttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaa 182  Q
    |||||||| |||||||||||||||||  || ||| ||||||||||||  |||||||||    
T  30423434 tgtttagatttgtgttatttgaacatctatttatgtgataacttttgatacaatcaaa 30423491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 33603168 - 33603258
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||| ||||||||| ||| ||| ||| |||||||  ||   ||||||||||||||| |  ||||||| |||||||||||||| ||||    
T  33603168 gagttgtgttttttgaacatccatttatatgacaacttttaagattgtcaaaattttacaaaga--aaatgaggtattgacacaaaaatcaaa 33603258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 11014890 - 11014963
Alignment:
Q  143 ttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaa 218  Q
    ||||||||  || ||| |||||||||||| |||||||||||||||  |  ||| ||||||| ||||||||||||||    
T  11014890 ttgaacatctatttatatgataacttttgagacaatcaaaatttt--atgaagaaaatgaggtattgacacaaaaa 11014963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 17551267 - 17551358
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||||||  || | | ||| | | |||||||||| ||||||||   | |||| |||||||  ||||||||||||||||||||    
T  17551267 gagttgtgttatttgaacatctatttttatgacagcatttgtgacaaccaaaattt---ataaagaaaatgagggattgacacaaaaaccaaaac 17551358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 29175409 - 29175318
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||  |||| ||||||| |||||||||||||||||||    
T  29175409 agagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttac--aaagtaaatgagctattgacacaaaaaccaaa 29175318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 27050973 - 27051066
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||| ||||||||||||||||||||| || ||| |||||||||||||| |||||||||||  |||| |||||||||||||||||||||||||||||    
T  27050973 agagatgtgttatttgaacattcataaatgtgacaacttttgtgacaaccaaaattttac--aaagaaaatgagatattgacacaaaaaccaaaac 27051066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 44539918 - 44539827
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||  |||||||||||| || || |||||||||||||    
T  44539918 agagttgtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtagtgtcacaaaaaccaaa 44539827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 26724858 - 26724952
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||||||||||| ||||||| ||||||||||||| ||||  ||||||||||  |||||||||||| || ||||||||||||||||||    
T  26724858 tagagttgtgttatttgaacatccatatatgtgataacttttgtaacaactaaaattttac--aaaggaaatgaggtagtgacacaaaaaccaaaac 26724952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 39440667 - 39440577
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  | |||||||||||| || ||||||||||| ||||    
T  39440667 gagttgtgttatttgaacattcatatatgtgacaacttttgtgacaatcaaaatttt--agaaaggaaatgaggtagtgacacaaaaatcaaa 39440577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 43175167 - 43175077
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||| ||||||||||||||  |||||||||||| || ||||||||||||||||    
T  43175167 gagttgtgttatttgaacatccatatatgtgacaacttttgtgataatcaaaattttac--aaaggaaatgaggtagtgacacaaaaaccaaa 43175077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 53801647 - 53801733
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||  |||||||||||| |||||||||||||||    
T  53801647 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtattgacacaaaaac 53801733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 37297232 - 37297142
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||   ||||||||||| || ||||||||||||||||    
T  37297232 agagttgtgttatttgaacatccatatatttgacaacttttgtgacaaccaaaattttac---aaggaaatgaggtagtgacacaaaaaccaaa 37297142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 51986226 - 51986135
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||  |||||||||||| || || |||||||||||||    
T  51986226 agagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtagtggcacaaaaaccaaa 51986135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 26732409 - 26732316
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||  |||| ||||||| || || |||||||||||||||    
T  26732409 agagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttac--aaagaaaatgaggtagtggcacaaaaaccaaaac 26732316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 23369219 - 23369310
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||| |||||| ||||  |||||||||||| || || |||||||||||||    
T  23369219 agagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaatcttac--aaaggaaatgaggtagtggcacaaaaaccaaa 23369310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 31641452 - 31641543
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||  | ||||||||| || || ||||||||||| ||||    
T  31641452 agagttgtgttatttgaacattcatatacgtgataacttttgtgacaaccaaaatttt--ataaaggaaataaggtagtgacacaaaaatcaaa 31641543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 36178094 - 36177999
Alignment:
Q  126 gtttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||  ||||||||  | |||||||||||| || ||  ||||||||||||    
T  36178094 gtttagagttgtgttatttgaacatttatatatgtgataacttttgtgacaactaaaatttt--ataaaggaaatgaggtagtggtacaaaaaccaaa 36177999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 38376378 - 38376468
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||  |||||| |||||| |||||||||||||||||||||||  |||| |||||||||| || |||||||| ||||    
T  38376378 gagttgtgttatttgaacatctatatatgtgataatttttgtgacaatcaaaattttac--aaagaaaatgagatagtggcacaaaaatcaaa 38376468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 127 - 223
Target Start/End: Complemental strand, 27965172 - 27965080
Alignment:
Q  127 tttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||||| ||||||| ||| ||||| |||||||| |||||||||    || ||||||||| || ||||||||||||||||    
T  27965172 tttagagttgtgttatttgaacatccatatatgtgacaacttctgtgacaaccaaaatttt----aatggaaatgaggtagtgacacaaaaaccaaa 27965080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 11068868 - 11068781
Alignment:
Q  134 ttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||  ||||||||||||  | ||||||||||| ||||    
T  11068868 ttgtgttatttgaacattcatatatgtgacaacttttgtggcaaccaaaattttac--aaaggaaatgaggcagtgacacaaaaatcaaa 11068781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 24575742 - 24575829
Alignment:
Q  134 ttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||  |||||| ||| |||||||||||||| |||||||||  | |||||||||||| ||||| |||||||||||||    
T  24575742 ttgtgttatttgaacatctatatatgtgacaacttttgtgacaaccaaaatttt--ataaaggaaatgaggtattggcacaaaaaccaaa 24575829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 26492191 - 26492100
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||  |||||| ||| || |||||||||||||||||||||||  |||||||||||  || || |||||||||||||    
T  26492191 agagttgtgttatttgaacatctatatatgtgacaatttttgtgacaatcaaaattttac--aaaggaaatgaagtagtggcacaaaaaccaaa 26492100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 134 - 225
Target Start/End: Original strand, 19473847 - 19473936
Alignment:
Q  134 ttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||| || ||| ||| ||| |||||||| |||||||||||||||||  |||| ||||||  |||||||||||||||||||||    
T  19473847 ttgtgttatttgaagatgcatttatatgacaacttttgagacaatcaaaattttac--aaagaaaatgaagtattgacacaaaaaccaaaac 19473936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 139 - 225
Target Start/End: Complemental strand, 38134528 - 38134444
Alignment:
Q  139 ttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||| || ||| ||||||||||| || |||||||||||  ||||||||||||  | ||||||||||||||||||    
T  38134528 ttatttgaacattcatacatgtgacaacttttgtgataaccaaaattttac--aaaggaaatgaggcagtgacacaaaaaccaaaac 38134444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 34616745 - 34616658
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    |||||||||||||||||||||  || ||| ||| |||||||| ||||| |||||||||  | |||| |||||||||||||||||||||||    
T  34616745 agagttgtgttatttgaacatctatttatatgacaacttttgagacaaccaaaatttt--ataaagaaaatgagatattgacacaaaaac 34616658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 38382505 - 38382418
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||| ||||| |||||||||  | |||| ||||||| |||||||||||||||    
T  38382505 agagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaatttt--ataaagaaaatgaggtattgacacaaaaac 38382418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 39478621 - 39478530
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||  || ||||| ||||||| ||| |||||||||||||| |||||||||||  |||| ||||||| |||||||||||||| ||||    
T  39478621 agagttgtgtttattaaacatccatatatatgacaacttttgtgacaaccaaaattttac--aaagaaaatgaggtattgacacaaaaatcaaa 39478530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 47182025 - 47181938
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||| ||||| |||||||||  | |||| ||||||| |||||||||||||||    
T  47182025 agagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaatttt--ataaagaaaatgaggtattgacacaaaaac 47181938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 48402084 - 48402171
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||| ||||| |||||||||  | |||| ||||||| |||||||||||||||    
T  48402084 agagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaatttt--ataaagaaaatgaggtattgacacaaaaac 48402171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 15175729 - 15175643
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    ||||||| |||||||||||| ||||||| ||| ||||||||| |||| |||||||||||  |||||||||||| ||||  |||||||||    
T  15175729 gagttgtattatttgaacatccatatatgtgacaacttttgttacaaccaaaattttac--aaaggaaatgaggtattagcacaaaaac 15175643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 46213153 - 46213063
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||| || ||||||| ||| ||||||||| |||| |||||||||||  |||||||||||| || |  |||||||||||||    
T  46213153 gagttgtgttatttgaaaatccatatatgtgaaaacttttgtaacaaccaaaattttac--aaaggaaatgaggtagttgcacaaaaaccaaa 46213063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 2268434 - 2268487
Alignment:
Q  170 tgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  2268434 tgtgacaaccaaaattttacaaa--ggaaatgagatattgacacaaaaaccaaaac 2268487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 2575677 - 2575768
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||  || ||| ||| ||||||||||||||  ||| ||||||  |||| |||||||| ||||||||| ||||||||    
T  2575677 agagttgtgttatttgaacatctatttatatgacaacttttgtgacaactaaagttttac--aaagaaaatgagagattgacacacaaaccaaa 2575768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 10250406 - 10250464
Alignment:
Q  134 ttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    ||||||||||||||||| |||||||  || |||||||||||||| ||||||||||||||    
T  10250406 ttgtgttatttgaacatccatatatgcgacaacttttgtgacaaccaaaattttacaaa 10250464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 37997438 - 37997347
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||| |||| |||||||||||  |||||| |||||| |||||| |||| |||||||||||  |||| ||||||| |||||||||||||| ||||    
T  37997438 agagctgtgctatttgaacatctatatatgtgataatttttgttacaaccaaaattttac--aaagaaaatgaggtattgacacaaaaatcaaa 37997347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 40348973 - 40348887
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||||||      ||| ||||||||||||||||||||||||  ||| |  |||||||||| ||||||||||||||||    
T  40348973 agagttgtgttatttgaacattcag-----tgacaacttttgtgacaatcaaaattttttaaaga--aaatgagatagtgacacaaaaaccaaa 40348887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 42853761 - 42853670
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||| |   ||| || ||||| |||||||||||||||| ||| |  ||||||| |||||||||||||||||||    
T  42853761 agagttgtgttatttgaacatccatttgagtgacaatttttgagacaatcaaaattttataaaga--aaatgaggtattgacacaaaaaccaaa 42853670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 217
Target Start/End: Original strand, 56363932 - 56364017
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaa 217  Q
    ||||||||||||||||||||| ||| ||  ||| |||||||| ||||| |||||||||  | |||| ||||||| |||||||||||||    
T  56363932 agagttgtgttatttgaacatccatttacatgacaacttttgagacaaccaaaatttt--ataaagaaaatgaggtattgacacaaaa 56364017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 26907970 - 26908033
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaa 194  Q
    ||||||||||||||||| || ||||||| |||||| |||| ||||||| ||||||||| |||||    
T  26907970 gagttgtgttatttgaatatccatatatgtgataatttttatgacaattaaaattttataaaaa 26908033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 38510661 - 38510716
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaatttta 188  Q
    |||||||||||||| |||||| ||||||  ||||| ||||||||||||||||||||||    
T  38510661 gagttgtgttatttcaacatttatatat--gataatttttgtgacaatcaaaatttta 38510716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 39195241 - 39195150
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||  || ||| ||| ||| ||||||| ||||||| ||||||  |||| |||||||| |||| |||| ||||||||    
T  39195241 agagttgtgttatttgaacatctatttatatgacaacatttgtgataatcaaagttttac--aaagaaaatgagagattggcacacaaaccaaa 39195150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 29531533 - 29531586
Alignment:
Q  170 tgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||| ||||||||||||||  ||||||||| || ||||||||||||||||||    
T  29531533 tgtgacaaccaaaattttacaaa--ggaaatgaggtagtgacacaaaaaccaaaac 29531586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 3316529 - 3316474
Alignment:
Q  139 ttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaa 194  Q
    |||||||||||| ||| ||  ||| |||||||| ||||||||||||||||||||||    
T  3316529 ttatttgaacatccatttagatgacaacttttgagacaatcaaaattttacaaaaa 3316474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 5622643 - 5622551
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||| ||  |||||| | | ||||||||||| ||  ||||||||||  |||||||||||| || |  |||||||||||||    
T  5622643 tagagttgtgttatttgaagatctatatatgtcacaacttttgtgataactaaaattttac--aaaggaaatgaggtagttgcacaaaaaccaaa 5622551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 45083149 - 45083098
Alignment:
Q  137 tgttatttgaacattcatatatctgataacttttgtgacaatcaaaatttta 188  Q
    |||||||||||||| ||||||| ||| ||||||| | |||||||||||||||    
T  45083149 tgttatttgaacatccatatatgtgacaacttttattacaatcaaaatttta 45083098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 50608551 - 50608602
Alignment:
Q  170 tgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||  |||||||||||||  |||||||||||||||||||||||| ||||    
T  50608551 tgtgacaactaaaattttacaaa--ggaaatgagatattgacacaaaaatcaaa 50608602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 5233558 - 5233619
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    ||||||||||||||||||||  || ||| | | ||||||||  |||||||||||||||||||    
T  5233558 gagttgtgttatttgaacatctatttatgtaacaacttttgaaacaatcaaaattttacaaa 5233619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 45257069 - 45257127
Alignment:
Q  163 taacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||| ||||| |||||||||| |||||| |||  ||||||| ||||||||||||||    
T  45257069 taacttttgagacaaccaaaattttaaaaaaagaaaa--agatattaacacaaaaaccaaa 45257127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 49449031 - 49449092
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttaca 190  Q
    |||| ||||||||||| ||||||||| ||| ||| |||||||  ||||| ||||||||||||    
T  49449031 tagaattgtgttatttaaacattcatttatatgacaacttttaagacaaccaaaattttaca 49449092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 6e-27; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 37503635 - 37503725
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||| |  ||||||||||||||||||||||||||| ||||    
T  37503635 gagttgtgttatttgaacatttatatatgtgataacttttgtgacaaccaaaattttgc--aaaggaaatgagatattgacacaaaaatcaaa 37503725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 46624091 - 46623998
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||  |||| ||||||| || ||||||||||||||||||    
T  46624091 agagttgtgttatttgaacatccatacatgtgataacttttgtgacaatcaaaattttac--aaagaaaatgaggtagtgacacaaaaaccaaaac 46623998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 32924169 - 32924259
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||  |||||||||||| || ||||||||||||||||    
T  32924169 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtagtgacacaaaaaccaaa 32924259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 19149173 - 19149081
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||||||||| ||||||| ||| || |||||||||||||||||||||||  |||||||||||| || || |||||||||||||||    
T  19149173 gagttgtgttatttgaacatccatatatgtgacaatttttgtgacaatcaaaattttac--aaaggaaatgagttagtggcacaaaaaccaaaac 19149081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 41309302 - 41309210
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||  |||| ||||||| || ||||||||||| ||||    
T  41309302 tagagttgtgttatttgaacatccatatatgcgataacttttgtgacaatcaaaattttac--aaagaaaatgaggtagtgacacaaaaatcaaa 41309210  T

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Target: chr3; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 55151603 - 55151695
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||| ||||| ||||||||||  |||||||||||  |||||||||||||||||||    
T  55151603 tagagttgtgttatttgaacatttatatatgtgacaacttttgttacaattaaaattttac--aaaggaaatgaagtattgacacaaaaaccaaa 55151695  T

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Target: chr3; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 27541389 - 27541480
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||| |||||||||||  |||||||||||| || || |||||||||||||    
T  27541389 agagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtagtggcacaaaaaccaaa 27541480  T

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Target: chr3; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 35597344 - 35597253
Alignment:
Q  132 agttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||||| |||||||||| ||| |||||||||||||| |||||||||||  |||||||| ||| || ||||||||||||||||||    
T  35597344 agttgtgttatttgaatattcatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaacgaggtagtgacacaaaaaccaaaac 35597253  T

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Target: chr3; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 42358529 - 42358616
Alignment:
Q  134 ttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| |  |||||||||||| |||||||||||||| ||||    
T  42358529 ttgtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttgc--aaaggaaatgaggtattgacacaaaaatcaaa 42358616  T

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Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 288909 - 288819
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||| || ||||||| ||| |||| |||| ||||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  288909 gagttgtgttatttgaaaatccatatatgtgacaactattgtaacaatcaaaattttacaaaa--gaaatgagatagtgacacaaaaaccaaa 288819  T

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Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 36670902 - 36670992
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||  ||| |||||||| || || |||||||||||||    
T  36670902 gagttgtgttatttgaacatccatatatgtgataacttttgtgacaaccaaaattttac--aaatgaaatgaggtagtggcacaaaaaccaaa 36670992  T

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Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 42356972 - 42357062
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||| ||||||| ||| || ||||||||||| |||||||||||  |||||||||||| || ||||||||||||||||    
T  42356972 gagttgtgttatttgaacatccatatatgtgacaatttttgtgacaaccaaaattttac--aaaggaaatgaggtagtgacacaaaaaccaaa 42357062  T

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Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 127 - 223
Target Start/End: Complemental strand, 52939838 - 52939744
Alignment:
Q  127 tttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||||| ||||||| ||| |||||| ||||||| |||||||||||  |||||||||||| || || |||||||||||||    
T  52939838 tttagagttgtgttatttgaacatccatatatgtgacaactttcgtgacaaccaaaattttac--aaaggaaatgaggtagtggcacaaaaaccaaa 52939744  T

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Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 44413283 - 44413370
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaacc 220  Q
    ||||||||||||||||||||  |||||| ||| ||||||||||||||| ||||||||||  |||||||||||| ||||| ||||||||||    
T  44413283 gagttgtgttatttgaacatctatatatgtgacaacttttgtgacaattaaaattttac--aaaggaaatgaggtattggcacaaaaacc 44413370  T

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Target: chr3; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 31157564 - 31157657
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||||| |||||||||||||  ||||||||| || |||||  ||||||| ||||||    
T  31157564 agagttgtgttatttgaacatccatatatgtgataacttctgtgactatcaaaattttac--aaaggaaattaggtattggtacaaaaatcaaaac 31157657  T

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Target: chr3; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 52326203 - 52326110
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||||||| ||||||| ||| ||||||| ||||||||||||||||||  |||||||||||| ||    |||||||||||||||    
T  52326203 agagttgtgttatttgaacatccatatatatgacaacttttatgacaatcaaaattttac--aaaggaaatgaggtaagtgcacaaaaaccaaaac 52326110  T

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Target: chr3; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 52254024 - 52254116
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||| |||||||||| ||||||| ||| || |||||||||||  ||||||||||  |||||||||||| || ||||||||||||||||    
T  52254024 tagagttgtgtcatttgaacatccatatatgtgacaatttttgtgacaactaaaattttac--aaaggaaatgaggtagtgacacaaaaaccaaa 52254116  T

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Target: chr3; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 24256660 - 24256751
Alignment:
Q  132 agttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||||| ||  |||||| ||| ||||||||||||||| ||||||||||  |||||||||||| |||||| ||||||| ||||||    
T  24256660 agttgtgttatttgaaaatctatatatgtgacaacttttgtgacaattaaaattttac--aaaggaaatgaggtattgatacaaaaatcaaaac 24256751  T

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Target: chr3; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 33939422 - 33939331
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||| ||||||| | |  |||||||||||  || ||||||||||||||||    
T  33939422 agagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattattc--aaaggaaatgaagtagtgacacaaaaaccaaa 33939331  T

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Target: chr3; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 37302730 - 37302639
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||| |||||||||||| |||| || ||| |||||||||||||||||||||||| |  |||||||||||| || || |||||||||||||    
T  37302730 agagttgtcttatttgaacatccatacatttgacaacttttgtgacaatcaaaattttgc--aaaggaaatgaggtagtggcacaaaaaccaaa 37302639  T

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Target: chr3; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 38926812 - 38926721
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||  |||||| ||| |||||| ||||||| |||||||||||  ||||||||| || || ||||||||||||||||    
T  38926812 agagttgtgttatttgaacatctatatatgtgacaactttcgtgacaaccaaaattttac--aaaggaaataaggtagtgacacaaaaaccaaa 38926721  T

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Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 5244408 - 5244322
Alignment:
Q  135 tgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||| |||||| ||| || ||||||||||| |||||||||||  |||||||||||| || || |||||||||||||    
T  5244408 tgtgttatttgaacatttatatatgtgacaatttttgtgacaaccaaaattttac--aaaggaaatgaggtagtggcacaaaaaccaaa 5244322  T

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Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 44383373 - 44383287
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaa 218  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||||  | |||| ||||||| ||||||||||||||    
T  44383373 agagttgtgttatttgaacatccatttatatgacaacttttgagacaatcaaaatttt--ataaagaaaatgaggtattgacacaaaaa 44383287  T

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Target: chr3; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 8847289 - 8847201
Alignment:
Q  134 ttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||| ||||||| | | ||||||||||| ||||||||||||||||| |  ||||||| ||||| |||||||||||||||    
T  8847289 ttgtgttatttgaacatccatatatgt-acaacttttgtgataatcaaaattttacaaata--aaatgaggtattggcacaaaaaccaaaac 8847201  T

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Target: chr3; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 37056944 - 37057037
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||| ||||| ||| |||||||  |||| ||||||| ||||||||||||||| |||||    
T  37056944 agagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaatattttac--aaagaaaatgaggtattgacacaaaaacaaaaac 37057037  T

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Target: chr3; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 16969454 - 16969546
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||||||  ||||||||||  |||||||||||| || || || ||||| ||||||    
T  16969454 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaactaaaattttac--aaaggaaatgaggtagtggcataaaaatcaaaac 16969546  T

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Target: chr3; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 47472512 - 47472420
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||| ||||||||||||||  |||||| ||| |||||||||||||| |||||||||||  |||||||||||| || || ||||||||| |||||    
T  47472512 gagttatgttatttgaacatctatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtagtggcacaaaaactaaaac 47472420  T

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Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 13348021 - 13348112
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||| |||||||||||||| ||| ||| ||| |||||||| ||||| |||||||||||  |||| ||||||| |||||| ||||||||||||    
T  13348021 agagttatgttatttgaacatccatttatatgacaacttttgggacaaccaaaattttac--aaagaaaatgaggtattgatacaaaaaccaaa 13348112  T

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Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 21217696 - 21217609
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    ||||||||||||||||||||| ||| ||| ||| |||||||| ||||| |||||||||  | |||| ||||||| |||||||||||||||    
T  21217696 agagttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaatttt--ataaagaaaatgaggtattgacacaaaaac 21217609  T

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Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 35201323 - 35201414
Alignment:
Q  132 agttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||||| ||| ||  ||| |||||||| |||||| |||||| |||  |||| |||| ||||||||||||||||||||||||    
T  35201323 agttgtgttatttgaacatccatttaaatgacaacttttgagacaattaaaattatac--aaagaaaataagatattgacacaaaaaccaaaac 35201414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 44856137 - 44856046
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||| ||| ||||| | |||||| |||||||||||  |||||||||||| || || |||||||| ||||    
T  44856137 agagttgtgttatttgaacatccatatatgtgacaacttgtatgacaaccaaaattttac--aaaggaaatgaggtagtggcacaaaaatcaaa 44856046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 7934157 - 7934068
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||| ||||||| ||| || |||||||||||  ||||||||||  |||||| |||||||| ||||| ||||||||||    
T  7934157 gagttgtgttatttgaacatccatatatgtgacaatttttgtgacaactaaaattttac--aaaggatatgagatagtgaca-aaaaaccaaa 7934068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 13735913 - 13735852
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||| ||||||||| ||||    
T  13735913 gagttgtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttgcaaa 13735852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 23592640 - 23592555
Alignment:
Q  132 agttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaac 219  Q
    ||||||||||||||||||| ||| ||| ||| |||||||| ||||| |||||||||  | |||| ||||||| |||||||||||||||    
T  23592640 agttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaatttt--ataaagaaaatgaggtattgacacaaaaac 23592555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 14226593 - 14226685
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||||| |||  ||| | | || ||||  |||||||||||||||||||| |  |||||| ||||||||||||||||||||||    
T  14226593 gagttgtgttatttgaacaatcaattatgtaacaatttttaagacaatcaaaattttacaaaga--aaatgaaatattgacacaaaaaccaaaac 14226685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 26014995 - 26014903
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    |||||||||||||| |||||  ||| || ||| |||||||||||||| |||||||||||  |||||||||||| ||  | |||||||||||||||    
T  26014995 gagttgtgttatttaaacatctatacatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtaagggcacaaaaaccaaaac 26014903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 220
Target Start/End: Complemental strand, 44813320 - 44813232
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaacc 220  Q
    |||||||||| ||||||||||  |||||| ||| |||||||||| |||||||||||||||  ||||||||| || || || ||||||||||    
T  44813320 agagttgtgtgatttgaacatctatatatgtgacaacttttgtggcaatcaaaattttac--aaaggaaattaggtagtggcacaaaaacc 44813232  T

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Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 5114262 - 5114171
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||||||||||||||||  || ||| ||| || |||| ||||||||||||||||||  |||| ||||||| || ||||||||||| ||||    
T  5114262 agagttgtgttatttgaacatctatttatgtgacaatttttatgacaatcaaaattttac--aaagaaaatgaggtagtgacacaaaaatcaaa 5114171  T

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Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 35376968 - 35377030
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    ||||||||||||||||||||| ||| ||  ||| |||||||||||||| ||||||||||||||    
T  35376968 agagttgtgttatttgaacatccatttagatgacaacttttgtgacaaccaaaattttacaaa 35377030  T

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Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 44413849 - 44413900
Alignment:
Q  170 tgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  44413849 tgtgacaatcaaaattttacaaaga--aaatgagatattgacacaaaaaccaaa 44413900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 9753525 - 9753432
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||| ||||||||||||| | | | | ||||||||  ||||||| |  ||||||||||| ||||| | |||||||||||||||||||    
T  9753525 agagttgtgttgtttgaacattcatttgtataacaacttttgatacaatcatagatttacaaaaagaaaatgtggtattgacacaaaaaccaaa 9753432  T

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Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 7668079 - 7668165
Alignment:
Q  134 ttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||| |||| || ||| |||||||||||||| ||||||||| |   |||||||| ||||| || || ||||||||||    
T  7668079 ttgtgttatttgaacatccatacatgtgacaacttttgtgacaaccaaaattttgc---aaggaaataagatagtggcataaaaaccaaa 7668165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 223
Target Start/End: Complemental strand, 44463538 - 44463450
Alignment:
Q  133 gttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||  |  ||| |||||||||||| || ||||||||||||||  |||| ||||| |||||||| ||||||| ||||    
T  44463538 gttgtgttatttgaacatcaaattatatgataacttttgagataatcaaaattttac--aaagaaaatgtgatattgatacaaaaatcaaa 44463450  T

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Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 42478143 - 42478086
Alignment:
Q  130 agagttgtgttatttgaacattcatatatct--gataacttttgtgacaatcaaaatt 185  Q
    ||||||||||||||||||||| ||||||| |  ||||||||||||||||| |||||||    
T  42478143 agagttgtgttatttgaacatccatatatatatgataacttttgtgacaaccaaaatt 42478086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 11630642 - 11630699
Alignment:
Q  135 tgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    |||||||||||||||||||| ||| ||| || ||||| |||||| |||||||||||||    
T  11630642 tgtgttatttgaacattcatttatatgacaatttttgagacaattaaaattttacaaa 11630699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 28539624 - 28539689
Alignment:
Q  127 tttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    |||| ||||||||||||||||||| ||| ||  ||||||||||||||| || ||||||||| ||||    
T  28539624 tttaaagttgtgttatttgaacatccatttagatgataacttttgtgataaccaaaattttgcaaa 28539689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 23600775 - 23600719
Alignment:
Q  132 agttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaatttta 188  Q
    ||||||||||||||||||| ||| ||| ||| |||||||| ||||| ||||||||||    
T  23600775 agttgtgttatttgaacatccatttatatgacaacttttgagacaaccaaaatttta 23600719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 20547901 - 20547968
Alignment:
Q  154 tatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||| ||| |||||||||||||| |||||||||||  |||||||||||| || || |||||||| ||||    
T  20547901 tatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtagtggcacaaaaatcaaa 20547968  T

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Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 41505635 - 41505584
Alignment:
Q  170 tgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    |||||||| ||||||||||||||  ||||||||| || ||||||||||||||||    
T  41505635 tgtgacaaccaaaattttacaaa--ggaaatgaggtagtgacacaaaaaccaaa 41505584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 39630501 - 39630566
Alignment:
Q  127 tttagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaa 192  Q
    ||||||||| ||||||||||||||  || ||| | |||| ||||  ||||||||||||||||||||    
T  39630501 tttagagttttgttatttgaacatctatttatataataatttttaagacaatcaaaattttacaaa 39630566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 44445478 - 44445392
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaa 218  Q
    |||||| ||||||||||||||  |||||| | | ||||||| |||||| |||||||||  | |||| ||||||||||||  ||||||||    
T  44445478 agagttatgttatttgaacatcgatatatgtaacaacttttatgacaaccaaaatttt--ataaagaaaatgagatatttgcacaaaaa 44445392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 25641470 - 25641530
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttaca 190  Q
    |||||||| |||||||||||| ||| ||| ||| |||||||| ||||| |||| |||||||    
T  25641470 agagttgtattatttgaacatccatttatatgacaacttttgagacaaccaaagttttaca 25641530  T

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Target: scaffold0199 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 8852 - 8761
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||  |||||||||||| || ||||||||||||||||    
T  8852 agagttgtgttatttgaacatccatatatctgacaacttttatgacaaccaaaattttac--aaaggaaatgaggtagtgacacaaaaaccaaa 8761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 224
Target Start/End: Complemental strand, 49478 - 49387
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaa 224  Q
    ||||| |||||||||||||| ||||||| ||| ||||||||||| || |||||||||||  |||||||||||| || |||||||||||||||||    
T  49478 gagttatgttatttgaacatccatatatgtgacaacttttgtgataaccaaaattttac--aaaggaaatgaggtagtgacacaaaaaccaaaa 49387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 76506 - 76597
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||| ||||| ||||||| ||| |||||||||||||| |||||||||||  |||||||||||| || || |||||||||||||    
T  76506 agagttgtgttattttaacatccatatatgtgacaacttttgtgacaaccaaaattttac--aaaggaaatgaggtagtggcacaaaaaccaaa 76597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 11967 - 11875
Alignment:
Q  129 tagagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||| ||||||||||||  ||| || ||| |||||||||||| | |||||||||||  |||| ||||||| |||||||||||||||||||    
T  11967 tagagttgtattatttgaacatctataaatatgacaacttttgtgacgaccaaaattttac--aaagaaaatgaggtattgacacaaaaaccaaa 11875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 53249 - 53341
Alignment:
Q  131 gagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaaac 225  Q
    ||||||||||||||||||||| || ||| |||||| ||||  ||||| ||||| |||  | |||| ||||||||||||||||||||||| |||||    
T  53249 gagttgtgttatttgaacatttatttatatgataagtttttagacaaccaaaaattt--ataaagaaaatgagatattgacacaaaaactaaaac 53341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 20788 - 20845
Alignment:
Q  130 agagttgtgttatttgaacattcatatatctgataacttttgtgacaatcaaaatttt 187  Q
    ||||||||||||||||||||| ||| ||  |||||| |||||||| ||||||||||||    
T  20788 agagttgtgttatttgaacatccatttaaatgataatttttgtgataatcaaaatttt 20845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 35667 - 35616
Alignment:
Q  170 tgtgacaatcaaaattttacaaaaaggaaatgagatattgacacaaaaaccaaa 223  Q
    ||||||||||||||||||||  |||| ||||||| || ||||||||||||||||    
T  35667 tgtgacaatcaaaattttac--aaagaaaatgaggtagtgacacaaaaaccaaa 35616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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