View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0154_2D_low_336 (Length: 211)
Name: NF0154_2D_low_336
Description: NF0154_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0154_2D_low_336 |
 |  |
|
[»] scaffold0113 (1 HSPs) |
 |  |  |
|
[»] scaffold0018 (1 HSPs) |
 |  |  |
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[»] scaffold0045 (1 HSPs) |
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[»] scaffold0140 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 148; Significance: 3e-78; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 27451260 - 27451455
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||||||||| ||| ||||| ||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||| ||||| |
|
|
T |
27451260 |
ttttttatccgtccgatatcgctccatcatgcgtcaaagtaagtagttcgcttccatagtcgacctccgaggaataaaaccaaataagttatccgtaaca |
27451359 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaatgatgt |
196 |
Q |
|
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
T |
27451360 |
tgagtctcttttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaattatgt |
27451455 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 48623614 - 48623804
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || | |||||||||| |||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||| ||||||| |||| |
|
|
T |
48623614 |
ttttttatccgtcctatatcgctccatcacgcgtcgaactaagtagattgcttccatagtcgacctcccaggcataaaaccaaattggttatctgtaact |
48623713 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
|||||| ||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
48623714 |
cgagtcttctttcttagtcttctttcgatcaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
48623804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 23907389 - 23907575
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| ||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||| |||| |
|
|
T |
23907389 |
ttttttatccgttcgatatcgctccatcacgcgtcgaagtaagtagattgcttccatagtcgacctcccaggcataaaaccaaattgattatccgtaact |
23907488 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcg |
187 |
Q |
|
|
|||||| ||||||||||||| || || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
T |
23907489 |
cgagtctcctttcttagtcttctttcgatcaccctttcccataactttatggtatgactcattagcttaattcccctataattcgcg |
23907575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 1778104 - 1778293
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||||||||| |||| ||||||||||||||| | ||||||||||| ||||||||||||||||| ||||| |||||| |||| |
|
|
T |
1778104 |
ttttttatccgtccgatatcgctccatcacacgtcgaagtaagtagattgcttccatagtcaacctcccaggcataaaatcaaattggttatccgtaact |
1778203 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaa |
190 |
Q |
|
|
|||||| ||||||||||||| || || |||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||| |
|
|
T |
1778204 |
cgagtctcctttcttagtcttctttcgatcaccctttcccataattccatggtatgactcattagcttaattctcctataattcgcgcaa |
1778293 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 435427 - 435267
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || ||||||||||| |||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||| |||| |
|
|
T |
435427 |
ttttttatccgtccgatatcgctctatcacgcgtcgaagtaagtagattgcttccatagtcaacctcccaggcataaaaccaaattggttatccgtaact |
435328 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactca |
161 |
Q |
|
|
||| || ||||||||||||| || || ||||||||||||||||||||||||||||||| |
|
|
T |
435327 |
cgagcctcctttcttagtcttctttcgatcaccctttcccataacttcatggtatgactca |
435267 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 53703804 - 53703655
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||| ||| || |||||||||||| |||||||||||||||||||| | ||||||||||||||||| ||| ||||||| ||| | ||||||| |||| |
|
|
T |
53703804 |
tttttcatccgtccgatatcgctccgtcacgcgtcgaagtaagtagattgcttccatagtcgacctctcagacataaaatcaatttggttatctgtaacc |
53703705 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcat |
150 |
Q |
|
|
|||||| ||||||||||||| || || |||||||||||||||||||| |
|
|
T |
53703704 |
cgagtctcctttcttagtcttctttcgatcaccctttcccataacttcat |
53703655 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 109 - 196
Target Start/End: Original strand, 16001137 - 16001225
Alignment:
Q |
109 |
ttttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcatt-agcttaattcccctataattcgcgcaatgatgt |
196 |
Q |
|
|
||||||||||||||| | ||| |||||||||||||||||||| |||||||||||| | ||||||| |||||||||| |||||| |||| |
|
|
T |
16001137 |
ttttcttagtcttcgttaaatcaccctttcccataacttcatagtatgactcattaattttaattctcctataattcacgcaattatgt |
16001225 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 109 - 188
Target Start/End: Complemental strand, 39707552 - 39707472
Alignment:
Q |
109 |
ttttcttagtcttcgctcaattaccctttccc-ataacttcatggtatgactcattagcttaattcccctataattcgcgc |
188 |
Q |
|
|
||||||||||||||| ||||| ||| ||| || ||||||||||||||||||||||||| |||||||| |||||||| |||| |
|
|
T |
39707552 |
ttttcttagtcttcgttcaatcacctttttcctataacttcatggtatgactcattagtttaattcctctataattggcgc |
39707472 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 56224835 - 56224776
Alignment:
Q |
124 |
ctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataatt |
183 |
Q |
|
|
|||||||||| ||||||| ||||||||| |||||||||||| |||||||| |||||||| |
|
|
T |
56224835 |
ctcaattaccatttcccacaacttcatgacatgactcattagtttaattcctctataatt |
56224776 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 128; Significance: 2e-66; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 2 - 189
Target Start/End: Original strand, 45368714 - 45368901
Alignment:
Q |
2 |
tttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaacat |
101 |
Q |
|
|
|||||||| || |||||||||||| ||||||||||||||||||| || ||||||||||| |||||||||||||||| |||||| |||||| |||||| |
|
|
T |
45368714 |
tttttatccgtccgatatcgctccatcacgcgtcgaagtaagtatatcgcttccatagtcaacctcccaggcataaagccaaattggttatccgtaacat |
45368813 |
T |
 |
Q |
102 |
gagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgca |
189 |
Q |
|
|
|||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
45368814 |
gagtctcttttcttagtcttcgttcaattaccctttcccataatttcatggtatgactcattagcttaattcccctataattcgcgca |
45368901 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 24584693 - 24584886
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||||||||| |||||||||||||||||||| || |||||||| |||||||||||| ||||||||||||| |||||||| |||| |
|
|
T |
24584693 |
ttttttatccgtccgatatcgctccatcacgcgtcgaagtaagtagatcgcttccatactcgacctcccagacataaaaccaaatcagttatctataact |
24584792 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctc---aattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
|||||| |||||||||||| | || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
24584793 |
cgagtctcctttcttagtctttgttcaataatcaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgtgcaat |
24584886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 8179988 - 8179798
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||||||||| ||||||||| |||||||||| | ||| ||||||||||||||||||||||||||||||| |||||| |||| |
|
|
T |
8179988 |
ttttttatccgtccgatatcgctccatcacgcgtcaaagtaagtagattgctttcatagtcgacctcccaggcataaaaccaaattggttatccgtaact |
8179889 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
|||||| ||||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
T |
8179888 |
cgagtctcctttcttagtcttctttcgatcaccctttcccataacttcatggtatgacttattagcttaattcccctataattcgcgcaat |
8179798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 452703 - 452885
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
T |
452703 |
ttttttatccgtccgatatcgctccatcacgcgtcgaagtaagtagattgcttccatagtcgacctcccaggcataaaaccaaattggttatccgtaact |
452802 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataatt |
183 |
Q |
|
|
|||||| ||||||||||||| || || |||||||| | |||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
452803 |
cgagtctcctttcttagtcttctttcgatcaccctttctcgtaacttcatggtatgactcattagcttaattcccctataatt |
452885 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 35 - 182
Target Start/End: Complemental strand, 13148482 - 13148336
Alignment:
Q |
35 |
cgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaacatgagtctattttcttagtcttcgctcaattaccc |
134 |
Q |
|
|
|||||||||||| || |||||||||| ||| || |||||||||| ||||| |||||| |||| |||||| |||||||||||||| ||||| |||| |
|
|
T |
13148482 |
cgaagtaagtagatcgcttccatagttgaca-cctaggcataaaatcaaattggttatcgataactcgagtctcttttcttagtcttcattcaatcaccc |
13148384 |
T |
 |
Q |
135 |
tttcccataacttcatggtatgactcattagcttaattcccctataat |
182 |
Q |
|
|
|||||||||||||||||||| |||||||||| |||||||||||||||| |
|
|
T |
13148383 |
tttcccataacttcatggtaagactcattagtttaattcccctataat |
13148336 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 18 - 191
Target Start/End: Complemental strand, 37281284 - 37281111
Alignment:
Q |
18 |
atcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaacatgagtctattttcttag |
117 |
Q |
|
|
|||||| | |||| |||| |||||||||| ||||||| ||||||||| || |||| |||||||||||| |||||| |||| | ||| | ||| ||||| |
|
|
T |
37281284 |
atcgcttcatcacacgtcaaagtaagtagatcacttctatagtcgacttctcaggtataaaaccaaattggttatcagtaacttaagtttgtttacttag |
37281185 |
T |
 |
Q |
118 |
tcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
|||||| ||||| || ||| |||||||||||||||||| ||||||| ||||||| ||||||||||||||||| |
|
|
T |
37281184 |
tcttcgttcaatcactttttatcataacttcatggtatgattcattagtttaattctcctataattcgcgcaat |
37281111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 174
Target Start/End: Complemental strand, 33251497 - 33251337
Alignment:
Q |
14 |
cgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaacatgagtctattttc |
113 |
Q |
|
|
|||||||||||| |||| ||||||||||| ||| | |||||||||| ||||| | |||||||||||| || ||||| |||| || || |||| |
|
|
T |
33251497 |
cgatatcgctccatcacacgtcgaagtaattagataacttccatagaagacctttcgggcataaaaccagattggttataagtaactcgaatcacttttt |
33251398 |
T |
 |
Q |
114 |
ttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcc |
174 |
Q |
|
|
|||||||||| ||||| ||| ||| ||||| |||||||| ||||||||| || |||||||| |
|
|
T |
33251397 |
ttagtcttcgttcaatcaccattttccatagcttcatgggatgactcataagtttaattcc |
33251337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 117; Significance: 9e-60; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 15216358 - 15216547
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| ||||||||||| | ||| |||||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||| |||| |
|
|
T |
15216358 |
ttttttatccattcgatatcgc--catcaagcgtcgaagtaagtagatcgctttcatagtcgacctcccaggcataaaaccaaattgattatccataact |
15216455 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaatg |
192 |
Q |
|
|
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
15216456 |
tgagtctcttttcttagtcttcgctcaattaccctttcgcataacttcatggtatgactcattagcttaattcccctataattcgtgcaatg |
15216547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 36544347 - 36544157
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
T |
36544347 |
ttttttatccgtcagatatcgctcaatcacgcgtcgaagtaagtagattgcttccatagtcgacctcccaggcataaaaccaaattggttatccgtaact |
36544248 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
||||||| ||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
T |
36544247 |
tgagtctcctttcttagtcttctttcgatcaccctttcccataacttcatggtatgactcattagcttaattcccctatgattcgcgcaat |
36544157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 42855102 - 42855271
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || | |||||||||| |||||||||||||||||||| || |||| |||||||||||||||||||||||||||||| |||||| |||| |
|
|
T |
42855102 |
ttttttatccgtccaatatcgctccatcacgcgtcgaagtaagtagatcgcttcaatagtcgacctcccaggcataaaaccaaattggttatccgtaacg |
42855201 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaa |
170 |
Q |
|
|
|||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
T |
42855202 |
cgagtctcttttcttagtcttcgctcaattttcctttcccataacttcatggtatgactcattagcttaa |
42855271 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 183
Target Start/End: Complemental strand, 13588800 - 13588720
Alignment:
Q |
103 |
agtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataatt |
183 |
Q |
|
|
||||| |||||||||| |||||||||| | | |||||| |||||| ||||||||||||||||| ||||||| | ||||||| |
|
|
T |
13588800 |
agtctcttttcttagttttcgctcaatcatcatttcccttaactttatggtatgactcattagtttaattcacttataatt |
13588720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6184855 - 6184814
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaa |
42 |
Q |
|
|
|||||||||||| |||||||||||| |||| ||||||||||| |
|
|
T |
6184855 |
ttttttatctgtccgatatcgctccatcacacgtcgaagtaa |
6184814 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 116; Significance: 3e-59; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 20428724 - 20428915
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||||||||| |||| |||| |||||||||| || ||||||||||| |||||||| ||||||||||| || ||||| | |||| |
|
|
T |
20428724 |
ttttttatccgtccgatatcgctccatcacacgtcaaagtaagtagatcgcttccatagtcaacctcccaagcataaaaccatattggttatttgtaacg |
20428823 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaatg |
192 |
Q |
|
|
||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
T |
20428824 |
tgagtctctgttcttagtcttcgttcaattaccctttcccataacttcatggtatgactcattagcttaattcccttataattcgcgcaatg |
20428915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 5260335 - 5260523
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||||||||| ||| |||||||| ||| || || |||||||| ||||||||||| ||||||||||||| |||||| |||| |
|
|
T |
5260335 |
ttttttatccgtccgatatcgctccatcaggcgtcgaaataaagagatcgcttccataatcgacctcccatacataaaaccaaattggttatccgtaacg |
5260434 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgca |
189 |
Q |
|
|
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
5260435 |
tgagtctcttttctaagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgca |
5260523 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 30670089 - 30669902
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
|||||| ||||| |||||||||||| |||| ||||||||||||||| | |||||||||||||||||| ||||||||||||||| |||||| |||| |
|
|
T |
30670089 |
ttttttctctgtccgatatcgctccatcacacgtcgaagtaagtagattgcttccatagtcgacctcct-ggcataaaaccaaattggttatccgtaact |
30669991 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgca |
189 |
Q |
|
|
||||||| |||||||||||||| ||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
30669990 |
tgagtctcatttcttagtcttcgttcaatcatcctttgccataacttcatggtatgactcattagcttaattcccctataatttgcgca |
30669902 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 6082594 - 6082394
Alignment:
Q |
2 |
tttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataa-----------gtt |
90 |
Q |
|
|
|||||||| || |||||||||| | |||| |||||||||||||| | ||||||||||||||||||||||||||||| ||| || ||| |
|
|
T |
6082594 |
tttttatccgtccgatatcgctgcatcacatgtcgaagtaagtagattgcttccatagtcgacctcccaggcataaaaaaaaaaaaaaaaaaaattggtt |
6082495 |
T |
 |
Q |
91 |
atctttaacatgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaa |
190 |
Q |
|
|
||| |||| |||||| ||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
6082494 |
atccgtaactcgagtctcctttcttagtcttctttcgatcaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaa |
6082395 |
T |
 |
Q |
191 |
t |
191 |
Q |
|
|
| |
|
|
T |
6082394 |
t |
6082394 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 9705970 - 9705850
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||||||||| || ||||||||||||||||| || ||||||||||||| ||||||||||||| ||| | |||||| |||| |
|
|
T |
9705970 |
ttttttatccgtccgatatcgctccatcgcgcgtcgaagtaagtagatcgtttccatagtcgacttcccaggcataaagtcaagttggttatccgtaacg |
9705871 |
T |
 |
Q |
101 |
tgagtctattttcttagtctt |
121 |
Q |
|
|
||||||| ||||||||||||| |
|
|
T |
9705870 |
tgagtctcttttcttagtctt |
9705850 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 26290964 - 26290789
Alignment:
Q |
15 |
gatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaacatgagtctattttct |
114 |
Q |
|
|
||||||||||| |||| | |||||| |||||| || |||||||| ||||||| ||| |||||||| |||| || || |||| |||| || |||| | |
|
|
T |
26290964 |
gatatcgctccatcacacatcgaagcaagtagatcgcttccata-tcgaccttccaaacataaaactaaattgattgtcaataacttgagactctttttt |
26290866 |
T |
 |
Q |
115 |
tagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
||||||||| ||||| || |||| |||||| |||||||||||||| || ||||||||||||| |||||| |||| |
|
|
T |
26290865 |
tagtcttcgttcaatcactctttttattaactttatggtatgactcataaggttaattcccctatcattcgcacaat |
26290789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 3629461 - 3629377
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaat |
85 |
Q |
|
|
|||||| | ||| |||||||||||| ||| || |||||||||||| ||| |||||| |||||||||| | |||||||| ||||| |
|
|
T |
3629461 |
ttttttgtttgtccgatatcgctccatcatacgccgaagtaagtagatcatttccattgtcgacctccaaagcataaaatcaaat |
3629377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 115; Significance: 1e-58; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 43241468 - 43241658
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
T |
43241468 |
ttttttatccgtccgatatcgctccatcacgcgtcgaagtaagtagattgcttccatagtcgacctcccaggcataaaaccaaattggttatccgtaact |
43241567 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
||||||| ||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
T |
43241568 |
tgagtctcctttcttagtcttctttcgatcaccctttcccataacttcatggtatgactcattagcttaattcccttataattcacgcaat |
43241658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 49348489 - 49348679
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
T |
49348489 |
ttttttatccgtccgatatcgctccatcacgcgtcgaagtaagtagattgcttccatagtcgacctcccaggcataaaaccaaattggttatccataact |
49348588 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
|||||| ||||||||||||| || || |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
49348589 |
cgagtcttctttcttagtcttctttcgatcaccctttcccatgacttcatggtatgactcattagcttaattctcctataattcgcgcaat |
49348679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 8671113 - 8670925
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||| |||| |
|
|
T |
8671113 |
ttttttatccgtccgatatcgctccatcacgcgtcgaagtaagtagattgcttccatagtcgacctcccaggcataaaaccaaattttttatccgtaact |
8671014 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgca |
189 |
Q |
|
|
||| || ||||||||| ||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
8671013 |
cgaggctcctttcttagttttctttccatcaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgca |
8670925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 51441851 - 51442037
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||| |||| ||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
T |
51441851 |
ttttttatccgtctgatatcactccatcacgcgtcgatgtaagtagattgcttccatagtcgacctcccaggcataaaaccaaattggttatccgtaact |
51441950 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcg |
187 |
Q |
|
|
|||||| ||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
51441951 |
cgagtctcctttcttagtcttctttcgatcaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcg |
51442037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 29173616 - 29173795
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || ||||||||||| |||| |||||||||||||| | |||||||||||||||||| |||||||||||||||| ||||||| |||| |
|
|
T |
29173616 |
ttttttatccgtctgatatcgctccatcacacgtcgaagtaagtaaattgcttccatagtcgacctcctaggcataaaaccaaattagttatccgtaact |
29173715 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctata |
180 |
Q |
|
|
|||||| |||||||||| |||| ||||| | |||||| |||||||| || ||| |||||||||| |||||||||||||| |
|
|
T |
29173716 |
cgagtctcttttcttagttttcgttcaatcatcctttcgcataacttgattgtacgactcattagtttaattcccctata |
29173795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 11681914 - 11681833
Alignment:
Q |
103 |
agtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattc |
184 |
Q |
|
|
||||| ||||||||||||||||||||| |||||||||||||| || |||||||||||| ||||||||||||||||||||||| |
|
|
T |
11681914 |
agtctcttttcttagtcttcgctcaatcaccctttcccataatttgatggtatgactctttagcttaattcccctataattc |
11681833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 32405580 - 32405729
Alignment:
Q |
33 |
gtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaacatgagtctattttcttagtcttcgctcaattac |
132 |
Q |
|
|
|||||||||||||| | |||||||||||||||| | ||||||||| |||||| |||| |||| || ||| |||||||||||| |||||||| || |
|
|
T |
32405580 |
gtcgaagtaagtagattgcttccatagtcgaccttcaaggcataaatccaaattgattattggtaactcgaatct-ttttcttagtctccgctcaatcac |
32405678 |
T |
 |
Q |
133 |
cctttcccataacttcatggtatgactcattagcttaattcccctataatt |
183 |
Q |
|
|
| |||||||||||||||||||||||||||| || |||||| |||||||||| |
|
|
T |
32405679 |
cttttcccataacttcatggtatgactcataaggttaatttccctataatt |
32405729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 32 - 161
Target Start/End: Original strand, 35829509 - 35829638
Alignment:
Q |
32 |
cgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaacatgagtctattttcttagtcttcgctcaatta |
131 |
Q |
|
|
|||| |||||||||| ||||||||||||||||||||||||||||||| | |||| ||||| |||| |||| | |||||||| ||| || ||||| | |
|
|
T |
35829509 |
cgtctaagtaagtagatcacttccatagtcgacctcccaggcataaatctaaattggttataagtaactcgagtattttttcttactctccgttcaatca |
35829608 |
T |
 |
Q |
132 |
ccctttcccataacttcatggtatgactca |
161 |
Q |
|
|
| ||||||||||||||| |||||||||||| |
|
|
T |
35829609 |
ctctttcccataacttcttggtatgactca |
35829638 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 45833755 - 45833593
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
|||||||| ||| | ||||| |||| |||| ||||||||||||||| | ||| |||||| || || || ||||||||||||| ||||||| ||| |
|
|
T |
45833755 |
ttttttatttgtccaatatcactccatcacacgtcgaagtaagtaggttgctttcatagttgatatctcatacataaaaccaaattagttatca--aact |
45833658 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattag |
165 |
Q |
|
|
||||||||||| |||||||||||||||| | | |||| ||||||||||||| ||||||| |||| |
|
|
T |
45833657 |
tgagtctatttctttagtcttcgctcaatcatcatttctcataacttcatggcatgactcgttag |
45833593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 111; Significance: 3e-56; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 32629803 - 32629616
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || ||||||| |||| ||||||||||||||| | || |||||||||||||||| ||||||||||| |||||| |||||| |||| |
|
|
T |
32629803 |
ttttttatccgtccgatatctctccatcacgcgtcgaagta----gatcgcttccatagtcgaccttccaggcataaagccaaattggttatccgtaacg |
32629708 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaatg |
192 |
Q |
|
|
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
T |
32629707 |
tgagtctcttttcttagtcttcgttcaattaccctttcccataacttcatggtatgactcattagcttaattcccctgtaattcgcgcaatg |
32629616 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 36651189 - 36650999
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||||||||| |||||||||||||||||||| | |||||||| |||||||||||| ||||||||||||| |||||| |||| |
|
|
T |
36651189 |
ttttttatccgtccgatatcgctccatcacgcgtcgaagtaagtagattgcttccataatcgacctcccagacataaaaccaaattggttatccgtaact |
36651090 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
|||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |
|
|
T |
36651089 |
cgagtctcctttcttagtcttctttcaatcaccctttcccataacttcatggtatgactcattagcttaattctcctataattcacgcaat |
36650999 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 11592884 - 11592694
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
|||||||| || |||||||||||| ||||||||||||||||| || | |||||||||||||||||| || ||||||||||||| |||||| |||| |
|
|
T |
11592884 |
ttttttattcgtccgatatcgctccatcacgcgtcgaagtaagcagattgcttccatagtcgacctccaagccataaaaccaaattggttatccgtaact |
11592785 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
|||||| ||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
11592784 |
cgagtctcctttcttagtcttctttcgatcaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
11592694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 33350893 - 33351083
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||||||||| |||||||| ||||||||||| | |||||||||||||||||||| |||||||||||||| |||||| |||| |
|
|
T |
33350893 |
ttttttatccgtccgatatcgctccatcacgcgttgaagtaagtagattgcttccatagtcgacctcccaagcataaaaccaaattggttatccgtaact |
33350992 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
|||||| ||||||||||||| | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
33350993 |
agagtctcctttcttagtcttcttttgatcaccctttcccacaacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
33351083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 39907466 - 39907646
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
|||||||||||| |||||||||||| |||||||||||||||||||| | |||||| |||||||||||||||||||||||||||| |||||| |||| |
|
|
T |
39907466 |
ttttttatctgtccgatatcgctccatcacgcgtcgaagtaagtagattgcttccacagtcgacctcccaggcataaaaccaaattggttatccgtaact |
39907565 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataa |
181 |
Q |
|
|
| |||| ||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
T |
39907566 |
cgggtctcctttcttagtcttctttcgatcaccctttcccataacttcatggtatgactcattagcttaattccccaataa |
39907646 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 24178298 - 24178472
Alignment:
Q |
17 |
tatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaacatgagtctattttctta |
116 |
Q |
|
|
||||||||| |||||| ||| || |||||| || |||||||||||||||||| ||| ||||||||||| |||||| |||| ||||||| |||||||| |
|
|
T |
24178298 |
tatcgctccatcacgcatcgcagcaagtagatcgcttccatagtcgacctccagggcgtaaaaccaaatttgttatccgtaacttgagtctcttttctta |
24178397 |
T |
 |
Q |
117 |
gtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
||||||| | ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
T |
24178398 |
gtcttcgttgaatcaccctttcccataacttcatggtatgactcattagctaaattcccctataattcacgcaat |
24178472 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 38896812 - 38896622
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||||||||| | |||||||||||||||| | |||||||||| |||||||||||||||||||| ||| |||||| |||| |
|
|
T |
38896812 |
ttttttatccgtccgatatcgctccattgtgcgtcgaagtaagtagattgcttccatagttgacctcccaggcataaaaccgaattggttatccgtaact |
38896713 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
|||||| ||||||||||||| || || ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
T |
38896712 |
cgagtctcctttcttagtcttctttcgatcacccttttccataacttcatggtatgactcattagcttaattcccctataatttgcgcaat |
38896622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 22346707 - 22346586
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| ||||||||||||||| ||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| ||| |
|
|
T |
22346707 |
ttttttatccgttcgatatcgctccatcacgtgtcgaagtaagtagattgcttccatagtcgacctcccaggcataaaaccaaattggttatccgaaact |
22346608 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttc |
122 |
Q |
|
|
|||||| ||||||||||||| |
|
|
T |
22346607 |
cgagtctcctttcttagtcttc |
22346586 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 38606234 - 38606156
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaa |
79 |
Q |
|
|
||||||||| || |||||||||||| |||||||||||||||||||| || ||| ||||||||||||||||| ||||||| |
|
|
T |
38606234 |
ttttttatccgtccgatatcgctccatcacgcgtcgaagtaagtagatcgctttcatagtcgacctcccagacataaaa |
38606156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 46356938 - 46356983
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtag |
46 |
Q |
|
|
|||||||| || |||||||||||| |||||||||||||||||||| |
|
|
T |
46356938 |
ttttttattcgtccgatatcgctccatcacgcgtcgaagtaagtag |
46356983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 111; Significance: 3e-56; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 2076561 - 2076751
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||||||||| || ||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
T |
2076561 |
ttttttatccgtccgatatcgctccatcccgcgtcgaagtaagtagattgcttccatagtcgacctcccaggcataaaaccaaattggttatccgtaact |
2076660 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
|||||| ||||||||||||| || || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
T |
2076661 |
cgagtctcctttcttagtcttctttcgatcaccctttcccataacttcatggtatgactcgttagcttaattcccctataattcgcgcaat |
2076751 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 20318183 - 20317996
Alignment:
Q |
4 |
tttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaacatga |
103 |
Q |
|
|
|||||| || |||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||| |||| || |
|
|
T |
20318183 |
tttatccgtccgatatcgctccatcacgcgtcgaagtaagtagattgcttccatagtcgacctcccaggcataaaaccaaattggttatctgtaactcga |
20318084 |
T |
 |
Q |
104 |
gtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
|||| ||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |
|
|
T |
20318083 |
gtctcctttcttagtcttctttcgatcaccctttcccataacttcatggtatgactcattagcttaattccctaataatttgcgcaat |
20317996 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 24177719 - 24177529
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||||||||| ||| |||||||||||||||| | ||||| |||||||||| |||||||||||||||||| |||||| |||| |
|
|
T |
24177719 |
ttttttatccgtccgatatcgctccatcatgcgtcgaagtaagtagattgcttccgtagtcgaccttccaggcataaaaccaaattggttatccgtaact |
24177620 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
|||||| ||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
24177619 |
cgagtctcctttcttagtcttctttcgatcaccctttcccataacttcatggtatgactcattagcttaattcccctataattcacgcaat |
24177529 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 1288615 - 1288805
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||| ||||| |||||||||||||||||||| | |||||| | |||||||||||| ||||||||||||| |||||| |||| |
|
|
T |
1288615 |
ttttttatccgtccgatattgctccatcacgcgtcgaagtaagtagattgcttccacaatcgacctcccagccataaaaccaaattggttatccgtaact |
1288714 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
|||||| ||||||||||||| || || ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| |
|
|
T |
1288715 |
cgagtctcctttcttagtcttctttcgatcaccctttcccatagcttcatggtatgactcattaacttaattcccctataattcgcacaat |
1288805 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 27153 - 26970
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| ||||||||||||| | |||| ||| ||||||||||| || ||||||||||||| || | || |||||||||||| |||||| |||| |
|
|
T |
27153 |
ttttttatccgttcgatatcgcttcatcacacgttgaagtaagtagatcgcttccatagtcgatcttcaag-cataaaaccaaaatggttatcagtaact |
27055 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcg |
185 |
Q |
|
|
||||| |||||||| | |||| ||||| |||| | |||| ||||||||||||||||||||| ||||||||||||||||||| |
|
|
T |
27054 |
caagtcttttttcttaattttcgttcaatcacccgcttccatgacttcatggtatgactcattaatttaattcccctataattcg |
26970 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 22832091 - 22832161
Alignment:
Q |
111 |
ttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataa |
181 |
Q |
|
|
|||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
22832091 |
ttcttagtcttcattcaatcactttttcccataacttcatggtatgactcattagcttaattcccctataa |
22832161 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 183
Target Start/End: Complemental strand, 25937183 - 25937109
Alignment:
Q |
110 |
tttcttagtcttcgctcaattacccttt-cccataacttcatggtatgactcattagcttaattcccctataatt |
183 |
Q |
|
|
|||| ||||||||||||||||| ||||| |||||||||||||||||||| |||| || |||||| ||||||||| |
|
|
T |
25937183 |
tttcgtagtcttcgctcaattaaccttttcccataacttcatggtatgaatcataagtttaattgtcctataatt |
25937109 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 174
Target Start/End: Original strand, 756080 - 756214
Alignment:
Q |
40 |
taagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaacatgagtctattttcttagtcttcgctcaattaccctttcc |
139 |
Q |
|
|
||||||| || ||||||| || ||||| ||||||||||| |||| ||||| ||| | ||||||| ||||||| |||| |||||||| || |||||| |
|
|
T |
756080 |
taagtagatcgcttccattgttaacctctcaggcataaaattaaattgattatcgttaccttgagtctcttttctttgtctccgctcaatcactctttcc |
756179 |
T |
 |
Q |
140 |
cataacttcatggtatgactcattagcttaattcc |
174 |
Q |
|
|
|||||||| ||||| ||||| | || |||||||| |
|
|
T |
756180 |
cataacttgttggtacgactcttaagtttaattcc |
756214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 107; Significance: 8e-54; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 51448796 - 51448986
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || |||||||||||| |||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||| |||||| |||| |
|
|
T |
51448796 |
ttttttatccgtccgatatcgctccatcacgcgtcgaagtaaatagattgcttccatagtcgacctcccaggtataaaaccaaattggttatccgtaact |
51448895 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
|||||| ||||||||||||| || || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
51448896 |
cgagtctcctttcttagtcttctttcgatcaccctttcccataactttatggtatgactcattagcttaattcccctataattcgcgcaat |
51448986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 52138023 - 52137833
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
|||||||||||| |||||||||||| |||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||| |||||| |||| |
|
|
T |
52138023 |
ttttttatctgtccgatatcgctccatcacgcgtcgaagtaagtagattgctttcatattcgacctcccaggcataaaaccaaattggttatccgtaact |
52137924 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
|| ||| ||||| ||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
T |
52137923 |
cgaatctcctttctgagtcttctttcgatcaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcacaat |
52137833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 38849297 - 38849107
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || ||| ||| |||| ||| ||||| |||||||||| | ||||||||||||||||||||||||||||| |||| |||||||| |||| |
|
|
T |
38849297 |
ttttttatccgtccgacatcactccgtcaagcgtcaaagtaagtagaccgcttccatagtcgacctcccaggcataaaagaaaattagttatctgtaacc |
38849198 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
|||||| ||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |
|
|
T |
38849197 |
cgagtctcttttcttagccttcgttcaatcactctttcccataacttcatggtatgactcattagtttaattcccttataattcgcgcaat |
38849107 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 27916753 - 27916583
Alignment:
Q |
19 |
tcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaacatgagtctattttcttagt |
118 |
Q |
|
|
||||||| |||| ||| |||||||||| |||| ||||| |||||||| || ||||||||||||| |||||| |||| || |||| |||||||| | |
|
|
T |
27916753 |
tcgctccatcacacgtggaagtaagtaaatcacatccatggtcgacctt--agacataaaaccaaattggttatcactaacttgggtctcttttcttatt |
27916656 |
T |
 |
Q |
119 |
cttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcgcaat |
191 |
Q |
|
|
||||| ||||| |||||||| ||||||||||||||||||||||| | ||| ||||||||||||| |||||| |
|
|
T |
27916655 |
cttcgttcaatcaccctttctcataacttcatggtatgactcatcaatttatatcccctataattcacgcaat |
27916583 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 3368958 - 3368775
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || ||||| ||||| ||| ||||||||||| |||| | |||| ||||||||| ||| || ||| | ||| |||| | |||| |||| |
|
|
T |
3368958 |
ttttttatccgtctgatattgctccatcatgcgtcgaagtaggtagataactttcatagtcgatctcacaagcaaataactaaattaattataagtaact |
3368859 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattc |
184 |
Q |
|
|
|||||| ||||||||||||||| ||||| || ||||||||||||||||||||||| | || || ||||||| ||||||||| |
|
|
T |
3368858 |
cgagtctcttttcttagtcttcgttcaatcacattttcccataacttcatggtatgaattataagtttaattcttctataattc |
3368775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0113 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0113
Description:
Target: scaffold0113; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 13360 - 13531
Alignment:
Q |
16 |
atatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaacatgagtctattttctt |
115 |
Q |
|
|
|||||||||| ||||||||||||||||||| || ||||||||||||||||||| |||||||||||||| |||||| |||| |||||| | |||| |
|
|
T |
13360 |
atatcgctccaccacgcgtcgaagtaagtagatcgtttccatagtcgacctcccaagcataaaaccaaattggttatccgtaactggagtcttctctctt |
13459 |
T |
 |
Q |
116 |
agtcttcgctcaattaccctttcccataacttcatggtatgactcattagcttaattcccctataattcgcg |
187 |
Q |
|
|
|||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
13460 |
agtcttcgttcaatcaccatttcccataacttcatggtatgactcattagcttaattcccctataattcgcg |
13531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0018 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0018
Description:
Target: scaffold0018; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 30663 - 30520
Alignment:
Q |
1 |
ttttttatctgttcgatatcgctccctcacgcgtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaaca |
100 |
Q |
|
|
||||||||| || ||||||||| | |||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
T |
30663 |
ttttttatccgtctgatatcgcttcatcacgcgttgaagtaagtagattgcttccatagtcgacctcccaggcataaaaccaaattggttatccgtaact |
30564 |
T |
 |
Q |
101 |
tgagtctattttcttagtcttcgctcaattaccctttcccataa |
144 |
Q |
|
|
|||||| ||||||||||||| ||||| |||||||||||||| |
|
|
T |
30563 |
cgagtctcctttcttagtcttctttcaatcaccctttcccataa |
30520 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 90209 - 90297
Alignment:
Q |
33 |
gtcgaagtaagtagttcacttccatagtcgacctcccaggcataaaaccaaataagttatctttaacatgagtctattttcttagtctt |
121 |
Q |
|
|
|||||| ||||||| ||||||||||||| |||||||| ||||||||| ||||| |||||| |||| |||||| ||||||||||||| |
|
|
T |
90209 |
gtcgaattaagtagatcacttccatagttgacctccctggcataaaatcaaattggttatccgtaactcgagtctcttttcttagtctt |
90297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0140 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0140
Description:
Target: scaffold0140; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 14931 - 15001
Alignment:
Q |
59 |
gtcgacctcccaggcataaaaccaaataagttatctttaacatgagtctattttcttagtcttcgctcaat |
129 |
Q |
|
|
|||||||||| || ||||||||||||| | |||| ||| |||||||| |||| |||||||||||||||| |
|
|
T |
14931 |
gtcgacctcctagacataaaaccaaattaattattgataatatgagtctcttttattagtcttcgctcaat |
15001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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