View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0154_2D_low_7 (Length: 1080)
Name: NF0154_2D_low_7
Description: NF0154_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0154_2D_low_7 |
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Alignment Details
Target: chr6 (Bit Score: 813; Significance: 0; HSPs: 12)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 813; E-Value: 0
Query Start/End: Original strand, 20 - 915
Target Start/End: Original strand, 2355698 - 2356592
Alignment:
Q |
20 |
taatggttctaagagcaaagaagctcctatatagtggctggtgcatggccaatacttggtcacctcccattgttaaaggcttccaaagcaccacatagaa |
119 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
2355698 |
taatggttctaagagcaaagaagctcctata--gtggctggtgcatggccaatacttggtcacctcccattgttaaaggcttccaaagcaccacatagaa |
2355795 |
T |
 |
Q |
120 |
ctttaggtgatttagctgataaatatggacccttgttcaccatcaaacttggttccaaaaatgctttagtacttagcaattcggaaatggcgaaggaatg |
219 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
T |
2355796 |
ctttaggtgatttagctgataaatatggacccttgttcaccatcaaacttggttccaaaaatgctttggtacttagcaattcggaaatggcgaaggaatg |
2355895 |
T |
 |
Q |
220 |
tttcaccaaatttgacgttgcaatttccactcgtcctaaacttgttgcaactgaacatttggcttacaatggagccatgttaattctatcaccttatggt |
319 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
T |
2355896 |
tttcaccaaatttgacgttgcaatttccactcgtcctaaacttgttgcaactgaacatttggcttacaatggagccatgttaattctatgaccttatggt |
2355995 |
T |
 |
Q |
320 |
ccttattgtcgccaagtgcgtgagatagcattgtcagagatccttgctaatcgtcgtattgaaaaactacaagaaatttgtgttttggaagttcaaactt |
419 |
Q |
|
|
|||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
2355996 |
ccttattggcgccaagtgcgtaagatagcattgtcagagatccttgttaatcgtcgtattgaaaaactacaagaaatttgtgttttggaagttcaaactt |
2356095 |
T |
 |
Q |
420 |
cgattaaagagctcttcaatgtttggaagagtaataacgagtccaactatgtgttagtcgagttgaggcaatggtttattgagttgaatttcaacattgt |
519 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
2356096 |
cgattaaagagctcttcaatgtttggaagagtaataacgagtccaactatgtgttagtcgagttgaggcaatggtttattgagttgaatttcaacattgt |
2356195 |
T |
 |
Q |
520 |
acttccgatgattgttgggaagcggtattttggtgctatgaatgagctcgatgagaaagaagcgcaaaagtgtatcaaagccgtggaggaaatcttgcgt |
619 |
Q |
|
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |
|
|
T |
2356196 |
acttccgatgattgttgggaagcgatattttggtgctatgaatgagctcgatgagaaagaagcgcaaaagtgtatcaaagctgtagaggaaatcttgcgt |
2356295 |
T |
 |
Q |
620 |
ttgatggggcaattcacggtgggagatgctattccttgtttagaacggtttgattttgacggccatgtgaaagctatgnnnnnnncttctaaggaattgg |
719 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
T |
2356296 |
ttgatggggcaattcacggtgggagatgctattccttgtttagaacggtttgattttggtggccatgtgaaagctatgaaaaaaacttctaaggaattgg |
2356395 |
T |
 |
Q |
720 |
acatgattttaaatgaatggttgaaggagcgtcgtaatagaacattgaatgaaaaggttgatcgtgatcaagatttcatggacgcattgctttcattgtt |
819 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
T |
2356396 |
acatgattttaaatgaatggttgaaggagcgtcgtaatagaacattgaatgaaaaggttgatcgtgatcaagatttcatggacgcattgctttcactgtt |
2356495 |
T |
 |
Q |
820 |
tgatggaacaacaattgaaggg-tttgatgccgataccacaatcaaagccacgatgttggtatgtatactttcattatattcgctttatcaatacaa |
915 |
Q |
|
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
2356496 |
tgatggaacaacaattgaagggttttgatgccgataccacaatcaaagccacgatgttggtatgtatactttcattatattcgctttatcaatacaa |
2356592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 935 - 1063
Target Start/End: Original strand, 2357454 - 2357582
Alignment:
Q |
935 |
agtggagggccaatggaacagaaagaaaaactctatacgaacttaccaaacactttgcttcaattgatacatgtttgaattttatttaaacttactctta |
1034 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
2357454 |
agtggagggccaatggaacagaaagaaaaactctatacgaacttaccaaacactttgcttcaattgatacatgtttgaattttatttaaacttactctta |
2357553 |
T |
 |
Q |
1035 |
tacacatttttataaaattttcacttcat |
1063 |
Q |
|
|
||||||||||||||||||||||||||||| |
|
|
T |
2357554 |
tacacatttttataaaattttcacttcat |
2357582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 62 - 300
Target Start/End: Original strand, 2361421 - 2361659
Alignment:
Q |
62 |
gcatggccaatacttggtcacctcccattgttaaaggcttccaaagcaccacatagaactttaggtgatttagctgataaatatggacccttgttcacca |
161 |
Q |
|
|
||||||||||||||||||||||| | | | ||||| ||| || ||| |||||||| ||||||| || |||||||||||||||||||||||||| | |
|
|
T |
2361421 |
gcatggccaatacttggtcacctacaactattaaaaaattcacaaaaacctcatagaaccttaggtgcattggctgataaatatggacccttgttcacta |
2361520 |
T |
 |
Q |
162 |
tcaaacttggttccaaaaatgctttagtacttagcaattcggaaatggcgaaggaatgtttcaccaaatttgacgttgcaatttccactcgtcctaaact |
261 |
Q |
|
|
| || |||||||||||| |||||| || ||||||||| ||||||||| |||||||||||||| ||| ||||| | ||||| |||| ||| |||||||| |
|
|
T |
2361521 |
ttaagcttggttccaaacgtgctttggttgttagcaattgggaaatggcaaaggaatgtttcacaaaaattgacttggcaatatccaatcgccctaaact |
2361620 |
T |
 |
Q |
262 |
tgttgcaactgaacatttggcttacaatggagccatgtt |
300 |
Q |
|
|
|| |||||| ||||||||| ||||||||| |||||||| |
|
|
T |
2361621 |
tgaagcaactcaacatttgggttacaatggtgccatgtt |
2361659 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 62 - 259
Target Start/End: Original strand, 2366025 - 2366222
Alignment:
Q |
62 |
gcatggccaatacttggtcacctcccattgttaaaggcttccaaagcaccacatagaactttaggtgatttagctgataaatatggacccttgttcacca |
161 |
Q |
|
|
||||||||||||||||||||||||||| | |||| |||| || |||| |||||||| ||||||| || |||||||||||||||||||||||||| | |
|
|
T |
2366025 |
gcatggccaatacttggtcacctcccactattaagatcttcacaatcacctcatagaaccttaggtgcattggctgataaatatggacccttgttcacta |
2366124 |
T |
 |
Q |
162 |
tcaaacttggttccaaaaatgctttagtacttagcaattcggaaatggcgaaggaatgtttcaccaaatttgacgttgcaatttccactcgtcctaaa |
259 |
Q |
|
|
| || ||||||||||| |||||| || |||||||||| ||||||||| |||||||||||||||||| ||||| | ||||| |||||||| |||||| |
|
|
T |
2366125 |
ttaagattggttccaaacgtgctttggttcttagcaattgggaaatggcaaaggaatgtttcaccaaaattgacttggcaatatccactcgccctaaa |
2366222 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 786 - 886
Target Start/End: Original strand, 2306465 - 2306565
Alignment:
Q |
786 |
atcaagatttcatggacgcattgctttcattgtttgatggaacaacaattgaagggtttgatgccgataccacaatcaaagccacgatgttggtatgtat |
885 |
Q |
|
|
|||||||| ||||||| | |||||||||||| ||||||||||||| || ||||||||||||| ||||||| ||||||||||||||| ||||||||||| |
|
|
T |
2306465 |
atcaagatatcatggatgtgttgctttcattgcttgatggaacaaccatcgaagggtttgatggtgataccataatcaaagccacgatattggtatgtat |
2306564 |
T |
 |
Q |
886 |
a |
886 |
Q |
|
|
| |
|
|
T |
2306565 |
a |
2306565 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 786 - 884
Target Start/End: Original strand, 2366767 - 2366865
Alignment:
Q |
786 |
atcaagatttcatggacgcattgctttcattgtttgatggaacaacaattgaagggtttgatgccgataccacaatcaaagccacgatgttggtatgta |
884 |
Q |
|
|
||||||| |||||||| | |||||||||||||||||||||||||||||||||| |||||| | ||||||| |||||||||||| | |||||||||| |
|
|
T |
2366767 |
atcaagacttcatggatgtgatgctttcattgtttgatggaacaacaattgaaggatttgattctgataccataatcaaagccacagtattggtatgta |
2366865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 131 - 334
Target Start/End: Original strand, 2338107 - 2338310
Alignment:
Q |
131 |
ttagctgataaatatggacccttgttcaccatcaaacttggttccaaaaatgctttagtacttagcaattcggaaatggcgaaggaatgtttcaccaaat |
230 |
Q |
|
|
|||||||||||||||||||| || ||||||||||| ||||| | ||| |||||||| |||| | ||||| ||||||||| |||||||||||||| | |
|
|
T |
2338107 |
ttagctgataaatatggaccattattcaccatcaagcttggcactaaacatgctttaatactcaacaattgggaaatggccaaggaatgtttcactacga |
2338206 |
T |
 |
Q |
231 |
ttgacgttgcaatttccactcgtcctaaacttgttgcaactgaacatttggcttacaatggagccatgttaattctatcaccttatggtccttattgtcg |
330 |
Q |
|
|
||| | |||| ||||||| || ||||||||||| ||||| |||| ||| |||||||||||||| ||| |||| |||||||||||||| || |
|
|
T |
2338207 |
acgacacggtcgtttcgtctcgtccaaagcttgttgcaacagaacacttgggttataatggagccatgtttggtcttgcaccatatggtccttattggcg |
2338306 |
T |
 |
Q |
331 |
ccaa |
334 |
Q |
|
|
|||| |
|
|
T |
2338307 |
ccaa |
2338310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 2349084 - 2349250
Alignment:
Q |
59 |
ggtgcatggccaatacttggtcacctccca-ttgttaaaggcttccaaagcaccacatagaactttaggtgatttagctgataaatatggacccttgttc |
157 |
Q |
|
|
|||||||||||||||||||||||||||||| || ||| ||| ||| |||| || ||| ||||||| |||||||||||||||||||| | ||| |
|
|
T |
2349084 |
ggtgcatggccaatacttggtcacctcccaatttttagtggcaaacaac-caccccacagagttttaggtccattagctgataaatatggaccaatattc |
2349182 |
T |
 |
Q |
158 |
accatcaaacttggttccaaaaatgctttagtacttagcaattcggaaatggcgaaggaatgtttcac |
225 |
Q |
|
|
|| ||||| |||||||| ||| |||||||| |||||| ||||| |||||| || |||||||||||||| |
|
|
T |
2349183 |
actatcaagcttggttctaaacatgctttaatacttaacaattgggaaattgccaaggaatgtttcac |
2349250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 786 - 883
Target Start/End: Original strand, 2362157 - 2362254
Alignment:
Q |
786 |
atcaagatttcatggacgcattgctttcattgtttgatggaacaacaattgaagggtttgatgccgataccacaatcaaagccacgatgttggtatgt |
883 |
Q |
|
|
||||||| |||||||| || |||||||||||| |||||| |||| |||||||||||| |||| | ||||| ||||||||||| || || ||||||||| |
|
|
T |
2362157 |
atcaagacttcatggatgccttgctttcattgcttgatgaaacaccaattgaagggtgtgattctgatactacaatcaaagcgacaatattggtatgt |
2362254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 2305786 - 2305877
Alignment:
Q |
131 |
ttagctgataaatatggacccttgttcaccatcaaacttggttccaaaaatgctttagtacttagcaattcggaaatggcgaaggaatgttt |
222 |
Q |
|
|
|||||||||||||||||||| || ||||||||||| |||||||| ||| ||||||| | || | ||||| ||||||||| ||||||||||| |
|
|
T |
2305786 |
ttagctgataaatatggaccattattcaccatcaagcttggttctaaacgtgctttaattctcaacaattgggaaatggccaaggaatgttt |
2305877 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 809 - 885
Target Start/End: Original strand, 2338806 - 2338882
Alignment:
Q |
809 |
ctttcattgtttgatggaacaacaattgaagggtttgatgccgataccacaatcaaagccacgatgttggtatgtat |
885 |
Q |
|
|
||||||||| ||||||||||||| |||||||||||||| | ||||||| |||||||||||| | ||||||||||| |
|
|
T |
2338806 |
ctttcattgcttgatggaacaaccattgaagggtttgacggtgataccataatcaaagccacactattggtatgtat |
2338882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 633 - 885
Target Start/End: Original strand, 2349664 - 2349922
Alignment:
Q |
633 |
tcacggtgggagatgctattccttgtttagaacggtttgattttgacggccatgtgaaagctatgnnnnnnncttctaaggaattggacatgattttaaa |
732 |
Q |
|
|
||||||||||||||| ||||||||||||| || |||||||||||| || ||| |||| || ||| |||||| |||| ||||| |||||| |
|
|
T |
2349664 |
tcacggtgggagatgttattccttgtttaaaatggtttgattttggtggtcatatgaaggccatggatgaaacttctacggaaatggacgaaattttagg |
2349763 |
T |
 |
Q |
733 |
tgaatggttgaaggagcgtcg---taatagaacattgaatgaaaag---gttgatcgtgatcaagatttcatggacgcattgctttcattgtttgatgga |
826 |
Q |
|
|
||| ||||||||||||| ||| ||| || || |||| ||||||| | ||||| |||||||| ||||||| | || |||||||| |||||||| |
|
|
T |
2349764 |
tgagtggttgaaggagcatcgccataaaaggactttgactgaaaaggctgatgatcaagatcaagacatcatggatgtgttaatttcattgcttgatgga |
2349863 |
T |
 |
Q |
827 |
acaacaattgaagggtttgatgccgataccacaatcaaagccacgatgttggtatgtat |
885 |
Q |
|
|
| ||| || |||||||||||| ||||||| ||||||||| || || ||||||||||| |
|
|
T |
2349864 |
aaaaccatggaagggtttgattgtgataccataatcaaagcaacaatattggtatgtat |
2349922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 66; Significance: 1e-28; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 113 - 326
Target Start/End: Original strand, 4303234 - 4303447
Alignment:
Q |
113 |
catagaactttaggtgatttagctgataaatatggacccttgttcaccatcaaacttggttccaaaaatgctttagtacttagcaattcggaaatggcga |
212 |
Q |
|
|
|||||||| ||||||| || ||||| | ||||||||| || ||||| |||||||||||||| | ||||||||| || || || |||| ||||||||| |
|
|
T |
4303234 |
catagaaccttaggtgcattggctgacacatatggacctttattcacaatcaaacttggttcgagaaatgctttggtgctaagtaattgggaaatggctg |
4303333 |
T |
 |
Q |
213 |
aggaatgtttcaccaaatttgacgttgcaatttccactcgtcctaaacttgttgcaactgaacatttggcttacaatggagccatgttaattctatcacc |
312 |
Q |
|
|
||||||||||||||||| ||||| | ||||||||| ||| |||| ||||| ||||| ||||| || ||||||||||||||||||| ||| | | || |
|
|
T |
4303334 |
aggaatgtttcaccaaaattgacttggcaatttccgatcgccctacacttgaaacaactcaacatatgacttacaatggagccatgttttttcaagctcc |
4303433 |
T |
 |
Q |
313 |
ttatggtccttatt |
326 |
Q |
|
|
||||||||||||| |
|
|
T |
4303434 |
ctatggtccttatt |
4303447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 786 - 883
Target Start/End: Original strand, 4303928 - 4304025
Alignment:
Q |
786 |
atcaagatttcatggacgcattgctttcattgtttgatggaacaacaattgaagggtttgatgccgataccacaatcaaagccacgatgttggtatgt |
883 |
Q |
|
|
||||||| |||||||| | ||||||||||| |||||||||||||||||||||| |||||| | |||||| |||||||||||| || |||||||| |
|
|
T |
4303928 |
atcaagacttcatggatgtgatgctttcattgcttgatggaacaacaattgaaggatttgattctgataccgtaatcaaagccacaatactggtatgt |
4304025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 615 - 690
Target Start/End: Original strand, 4303745 - 4303820
Alignment:
Q |
615 |
tgcgtttgatggggcaattcacggtgggagatgctattccttgtttagaacggtttgattttgacggccatgtgaa |
690 |
Q |
|
|
|||||||||||||| ||||| |||||||||||| |||||| |||| || |||||||||||| ||||||||||| |
|
|
T |
4303745 |
tgcgtttgatgggggtgttcacagtgggagatgctcttccttttttaaaatggtttgattttgggggccatgtgaa |
4303820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 50; Significance: 5e-19; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 191 - 300
Target Start/End: Original strand, 41340096 - 41340205
Alignment:
Q |
191 |
cttagcaattcggaaatggcgaaggaatgtttcaccaaatttgacgttgcaatttccactcgtcctaaacttgttgcaactgaacatttggcttacaatg |
290 |
Q |
|
|
|||||||||| ||||||||| |||||||||| |||||| ||||| | ||| |||| | ||| |||||||||| | |||| |||||||||||||||||| |
|
|
T |
41340096 |
cttagcaattgggaaatggctgaggaatgttttaccaaagttgacttggcagtttcaaatcgccctaaacttgaagtaactaaacatttggcttacaatg |
41340195 |
T |
 |
Q |
291 |
gagccatgtt |
300 |
Q |
|
|
|||||||||| |
|
|
T |
41340196 |
gagccatgtt |
41340205 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 50; Significance: 5e-19; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 758 - 886
Target Start/End: Complemental strand, 5805545 - 5805414
Alignment:
Q |
758 |
agaacattgaatgaaaaggttgatcgtga---tcaagatttcatggacgcattgctttcattgtttgatggaacaacaattgaagggtttgatgccgata |
854 |
Q |
|
|
||||| |||| ||||||||||||| |||| |||||| |||||||| | || ||||||||| ||||||||||||| ||||||||||||||| |||| |
|
|
T |
5805545 |
agaactttgagtgaaaaggttgatggtgaagatcaagacttcatggatgtgttactttcattgcttgatggaacaactattgaagggtttgattgtgata |
5805446 |
T |
 |
Q |
855 |
ccacaatcaaagccacgatgttggtatgtata |
886 |
Q |
|
|
||| ||||||||||| || |||||||||||| |
|
|
T |
5805445 |
ccatgatcaaagccacaatattggtatgtata |
5805414 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 225
Target Start/End: Complemental strand, 5806259 - 5806093
Alignment:
Q |
59 |
ggtgcatggccaatacttggtcacctccca-ttgttaaaggcttccaaagcaccacatagaactttaggtgatttagctgataaatatggacccttgttc |
157 |
Q |
|
|
|||||||||||||||||||||||||||||| || || ||| ||| ||||| ||||||| ||||||| ||| ||||||| ||||||| | ||| |
|
|
T |
5806259 |
ggtgcatggccaatacttggtcacctcccaattttttgtggcacacaa-gcaccccatagaatcttaggtgccctaggtgataaacatggaccaatattc |
5806161 |
T |
 |
Q |
158 |
accatcaaacttggttccaaaaatgctttagtacttagcaattcggaaatggcgaaggaatgtttcac |
225 |
Q |
|
|
|||||||| |||||| | ||| |||| |||||||| | ||||| ||||||||| |||||||||||||| |
|
|
T |
5806160 |
accatcaagcttggtcctaaacatgccttagtactcaacaattgggaaatggctaaggaatgtttcac |
5806093 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 407 - 445
Target Start/End: Complemental strand, 5805911 - 5805873
Alignment:
Q |
407 |
gaagttcaaacttcgattaaagagctcttcaatgtttgg |
445 |
Q |
|
|
||||||||||| ||||||||||||||||||||| ||||| |
|
|
T |
5805911 |
gaagttcaaacatcgattaaagagctcttcaatatttgg |
5805873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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