View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0154_low_9 (Length: 265)
Name: NF0154_low_9
Description: NF0154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0154_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 52036013 - 52036167
Alignment:
| Q |
1 |
caaggcaactactgttgttagtctgtttgagattctatacagcaagtaaacaataattgcgaatgctaattaagttcacaacaacgagcaattgcattta |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
52036013 |
caaggcaactactgttgttagtctgtttgagattctatacaacaagtaaacaataattgcgaatgctaattaagttcacaacaacgaccaattgcattta |
52036112 |
T |
|
| Q |
101 |
ttccatttaataagaatctctattggtgttgcacaaattcactaaacacaggttc |
155 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
52036113 |
ttccatttaataagaatctctattggtgttgcacaaattcactatacacaggttc |
52036167 |
T |
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