View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0156-INSERTION6 (Length: 731)
Name: NF0156-INSERTION6
Description: NF0156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0156-INSERTION6 |
 | |
|
| [»] chr1 (1 HSPs) |
| |
|
| [»] scaffold0425 (3 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 486; Significance: 0; HSPs: 42)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 486; E-Value: 0
Query Start/End: Original strand, 8 - 727
Target Start/End: Complemental strand, 6259171 - 6258446
Alignment:
| Q |
8 |
ggttaagatattggagactgatttgtggcgtttacccaagggtgagaacagca---tttattcggttttgagaatgagttaccttagcctcccctacaat |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||| | |||| |
|
|
| T |
6259171 |
ggttaagatattggagactgatttgtggcgtttacccaagggtgacaacagcaacatttattccgctttgagaatgagttaccttagcctcccttccaat |
6259072 |
T |
|
| Q |
105 |
ctgaagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaagctttggatggcacaaggtttgctaaagg |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
6259071 |
ctgaagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaagggtgaattaatcaagctttggatggcaaaaggtttgctaaagg |
6258972 |
T |
|
| Q |
205 |
gaatagccatta---atgaagagttgggtaataaattcttcaatgagctagtgtcaatgtcgtttttccaacaatcagcaattatgccattctgggctgg |
301 |
Q |
| |
|
||||| ||| | | ||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
6258971 |
gaataaccaaaaaagaagaagagttgggtaataaattcttcaatgatctagtgtcaatgtcttttttccaaccatcagcgattatgccattctgggctgg |
6258872 |
T |
|
| Q |
302 |
taagtactatttcatcatgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaattctgcttacgaatagagggtgtgaaagtgcaagatatc |
401 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6258871 |
taagtactatttcatcatgcatgatcttatcaatgatttagcgacatcaatgtcaggagaattctgcttacgaatagagggtgtgaaagtgcaagatatc |
6258772 |
T |
|
| Q |
402 |
cctcagaggacacgtcacatttggtgctgccttgatttggaagatggtgatagaaaactagagcctgttcaaaaaattaagggactacacagtctgatgg |
501 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||| || ||||| |||||||| |||||||||| |
|
|
| T |
6258771 |
cctcaaaggacacgtcacatttggtgccgccttgatttggaagatggtgatagaaaactaaagcagattcataacattaaaggactacagagtctgatgg |
6258672 |
T |
|
| Q |
502 |
tacaagcacagggctatggtgaccaacgctttaagataaacaaaaatgtgcagcttaatttgtttttaagactaagatatttgcggatattgtctttcaa |
601 |
Q |
| |
|
|| ||| ||| || |||||||| |||||||||||||| || |||||||||| | |||||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
6258671 |
tagaagaacaaggatatggtgagaaacgctttaagatatccaccaatgtgcagcagagtttgttttcaagactaaaatatttgcggatattgtctttctc |
6258572 |
T |
|
| Q |
602 |
tggttgcaatctcttagagctagttgatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaattcc |
701 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
6258571 |
tggttgcaatctcttagagctagctgatgagataagaaacttaaagcttctgcgctatctagacctttcttacaccgagattacaagtttacctgattcc |
6258472 |
T |
|
| Q |
702 |
atttgtaagctgtatcatttgcatac |
727 |
Q |
| |
|
||||||| | ||||| |||||||||| |
|
|
| T |
6258471 |
atttgtatgttgtataatttgcatac |
6258446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 473; E-Value: 0
Query Start/End: Original strand, 8 - 731
Target Start/End: Complemental strand, 6245259 - 6244533
Alignment:
| Q |
8 |
ggttaagatattggagactgatttgtggcgtttacccaagggtgagaacagcatttattcggttttgagaatgagttaccttagcctcccctacaatctg |
107 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| || |||| | || ||||||||| ||| | |||||||||||||||| |||||| | ||||||| |
|
|
| T |
6245259 |
ggttaagatattagagactgatttgtggcgtttacctgagagtgacagcaacatttattccgttctaagaatgagttaccttaacctcccttccaatctg |
6245160 |
T |
|
| Q |
108 |
aagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaagctttggatggcacaaggtttgctaaagggaa |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||| |
|
|
| T |
6245159 |
aagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaaactttggatggcagaaggtttgataaagggaa |
6245060 |
T |
|
| Q |
208 |
tagcca---ttaatgaagagttgggtaataaattcttcaatgagctagtgtcaatgtcgtttttccaacaatcagcaattatgccattctgggctggtaa |
304 |
Q |
| |
|
|||||| | | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6245059 |
tagccaaagatgaagaagagttgggtaataaattcttcaatgatctagtgtcaatgtcgtttttccaacaatcagcaattatgccattctgggctggtaa |
6244960 |
T |
|
| Q |
305 |
gtactatttcatcatgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaattctgcttacgaatagagggtgtgaaagtgcaagatatccct |
404 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6244959 |
gtacaatttcatcatgcatgatcttgtccatgatttagcgacatcaatgtcaggagaattctgcttacgaatagagggtgtgaaagtgcaagatatccct |
6244860 |
T |
|
| Q |
405 |
cagaggacacgtcacatttggtgctgccttgatttggaagatggtgatagaaaactagagcctgttcaaaaaattaagggactacacagtctgatggtac |
504 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| || ||||| ||| ||| |||||||||||| |
|
|
| T |
6244859 |
caaaggacacgtcacatttggtgctgccttgatttggaagatggtgatagaaaactaaagcagattcataacattaaaggagtacggagtctgatggtag |
6244760 |
T |
|
| Q |
505 |
aagcacagggctatggtgaccaacgctttaagataaacaaaaatgtgcagcttaatttgtttttaagactaagatatttgcggatattgtctttcaatgg |
604 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||| || ||||||||| |||||||| || |||| || |||||| |||| || ||||||||||| |
|
|
| T |
6244759 |
aagcacaaggctatggtgataaacgctttaagatatccaccaatgtgcagtataatttgtattcaagagtacaatatttacggaagttatctttcaatgg |
6244660 |
T |
|
| Q |
605 |
ttgcaatctcttagagctagttgatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaattccatt |
704 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6244659 |
ttgcaatctctcagagctagctgatgagataagaaacttaaagcttctgcgctatctagacctttcttacaccgagattacaagcttacctaattccatt |
6244560 |
T |
|
| Q |
705 |
tgtaagctgtatcatttgcatacgctc |
731 |
Q |
| |
|
|||| | ||||| |||||||||||||| |
|
|
| T |
6244559 |
tgtatgttgtataatttgcatacgctc |
6244533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 466; E-Value: 0
Query Start/End: Original strand, 8 - 731
Target Start/End: Original strand, 13270613 - 13271342
Alignment:
| Q |
8 |
ggttaagatattggagactgatttgtggcgtttacccaagggtgaga---acagcatttattcggttttgagaatgagttaccttagcctcccctacaat |
104 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| || | ||||| | ||||||||| ||| || |||||||||||||||||||||| || | |||| |
|
|
| T |
13270613 |
ggttaagatattggagactgatttgtggcatttctccgaaggtgacagcaacagcattttttccattctgagaatgagttaccttagcctaccttccaat |
13270712 |
T |
|
| Q |
105 |
ctgaagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaagctttggatggcacaaggtttgctaaagg |
204 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13270713 |
ctgaagcattgttttgcatattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaagctttggatggcacaaggtttgctaaagg |
13270812 |
T |
|
| Q |
205 |
gaatagccattaatgaag---agttgggtaataaattcttcaatgagctagtgtcaatgtcgtttttccaacaatcagcaattatgccattctgggctgg |
301 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
13270813 |
gaatagccaaaaatgaagaagagttgggtaataaattcttcaatgatctagtgtcaatttcgtttttccaacaatcagcaattgtgccattctgggctgg |
13270912 |
T |
|
| Q |
302 |
taagtactatttcatcatgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaattctgcttacgaatagagggtgtgaaagtgcaagatatc |
401 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
13270913 |
taagtactatttcatcatgcatgatcttgtccatgatttagcgacatcaatgtcaggggaattctgcttacgaatagagggtgtgaaagtgcaatatatc |
13271012 |
T |
|
| Q |
402 |
cctcagaggacacgtcacatttggtgctgccttgatttggaagatggtgatagaaaactagagcctgttcaaaaaattaagggactacacagtctgatgg |
501 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| || ||||| ||||||| |||||||||| |
|
|
| T |
13271013 |
cctcaaaggacacgtcacatttggtgctgccttgatttggaagatggtgatagaaaactaaagcagattcataacattaaaggactacggagtctgatgg |
13271112 |
T |
|
| Q |
502 |
tacaagcacagggctatggtgaccaacgctttaagataaacaaaaatgtgcagcttaatttgtttttaagactaagatatttgcggatattgtctttcaa |
601 |
Q |
| |
|
|| ||||||| ||||||||||| |||||||||||||| || ||||||||| |||||||| || ||||||| |||||| ||||| || |||||||| |
|
|
| T |
13271113 |
tagaagcacaaggctatggtgataaacgctttaagatatccaccaatgtgcagtataatttgtattcaagactacaatatttacggatgttatctttcaa |
13271212 |
T |
|
| Q |
602 |
tggttgcaatctcttagagctagttgatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaattcc |
701 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
13271213 |
aggttgcaatctctcagagctagctgatgagataagaaacttaaagcttctgcgctatctagacctttcttacaccgagattacaagcttacctgattcc |
13271312 |
T |
|
| Q |
702 |
atttgtaagctgtatcatttgcatacgctc |
731 |
Q |
| |
|
||||||| | ||||| |||||||||||||| |
|
|
| T |
13271313 |
atttgtatgttgtataatttgcatacgctc |
13271342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 8 - 731
Target Start/End: Complemental strand, 6168863 - 6168131
Alignment:
| Q |
8 |
ggttaagatattggagactgatttgtggcgtttacccaagggtgagaacagcatttattcggttttgagaatgagttaccttagcctcccctacaatctg |
107 |
Q |
| |
|
|||||||||||| ||||||||||||||| ||||||| ||| |||| | ||||||||||| || | ||| ||||||||||| |||||| | |||||| |
|
|
| T |
6168863 |
ggttaagatattagagactgatttgtggagtttacctaagagtgacagaagcatttattcctttctaagacagagttaccttaacctcccttcaaatctg |
6168764 |
T |
|
| Q |
108 |
aagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaagctttggatggcacaaggtttgctaaag---- |
203 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6168763 |
aagcattgttttgcatattgttctatatttcccaagggttataagtttgaaaaggatggattaatcaagctttggatggcacaaggtttgctaaagtgtt |
6168664 |
T |
|
| Q |
204 |
--ggaatagccattaatgaaga---gttgggtaataaattcttcaatgagctagtgtcaatgtcgtttttccaacaatcagcaattatgccattctgggc |
298 |
Q |
| |
|
|||| || || |||||||| |||||||||| ||||||| || | |||||||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6168663 |
gcggaaaagacaaaaatgaagaagagttgggtaatgaattctttgatcatctagtgtcaatgtcatttttccaacaatcagcaattatgccattatgggc |
6168564 |
T |
|
| Q |
299 |
tggtaagtactatttcatcatgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaattctgcttacgaatagagggtgtgaaagtgcaagat |
398 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||||| ||| || ||||||||| | ||||||||||||||||| || ||||||||| |
|
|
| T |
6168563 |
tggtaagtactatttcatcatgcatgatcttgccagtgatttagcgaaatcattgacaggagaatcccacttacgaatagagggtgataacgtgcaagat |
6168464 |
T |
|
| Q |
399 |
atccctcagaggacacgtcacatttggtgctgccttgatttggaagatggtgatagaaaactagagcctgttcaaaaaattaagggactacacagtctga |
498 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||||| |||||||| ||||||| |
|
|
| T |
6168463 |
atccctcaaaggacacgtcacatttggtgctgccttgatttggaagatggtgatagaaaactaaagcagattcgtgacattaaaggactacagagtctga |
6168364 |
T |
|
| Q |
499 |
tggtacaagcacagggctatggtgaccaacgctttaagataaacaaaaatgtgcagcttaatttgtttttaagactaagatatttgcggatattgtcttt |
598 |
Q |
| |
|
||||| ||||||| |||||||||||||| |||||| |||||| || |||| ||||||||||||||||| ||||||| ||||||||| | |||||||| |
|
|
| T |
6168363 |
tggtagaagcacaaggctatggtgaccagcgctttcagataagcaccgatgttcagcttaatttgttttttagactaaaatatttgcgaaggttgtcttt |
6168264 |
T |
|
| Q |
599 |
caatggttgcaatctcttagagctagttgatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaat |
698 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||| || ||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
6168263 |
caatggttgcaatctcttagagctagctgatgagataagaaatttaaagcttctacgatatctagacctttcttacaccgacattacaagcttacctaat |
6168164 |
T |
|
| Q |
699 |
tccatttgtaagctgtatcatttgcatacgctc |
731 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||| |
|
|
| T |
6168163 |
tccatttgtatgctgtataatttgcatacgctc |
6168131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 8 - 727
Target Start/End: Complemental strand, 6142258 - 6141530
Alignment:
| Q |
8 |
ggttaagatattggagactgatttgtggcgtttacccaagggtgagaacagcatttattcggttttgagaatgagttaccttagcctcccctacaatctg |
107 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| ||||||| | |||| |||| ||| ||||||| ||||||||||||||||| | ||||| |
|
|
| T |
6142258 |
ggttaggatattggagactgatttgtggcgtttaccagagggtgacggaaacattaattccgttctgagaatcagttaccttagcctcccttctgatctg |
6142159 |
T |
|
| Q |
108 |
aagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaagctttggatggcacaaggtttgctaaagg--- |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || |||||||||||||||||||||| ||||||| | || |
|
|
| T |
6142158 |
aagcattgttttgcttattgttctatatttcccaagggctatgagtttgagaagggtgaattaatcaagctttggatggcagaaggtttcttgaaccatt |
6142059 |
T |
|
| Q |
205 |
---gaatagccatta--at-gaagagttgggtaataaattcttcaatgagctagtgtcaatgtcgtttttccaacaatcagcaattatgccattctgggc |
298 |
Q |
| |
|
|| | | || || || |||||||| |||||| |||||||| || | ||||||||||| || |||||||||||||||| |||||||||||| ||| | |
|
|
| T |
6142058 |
tcagagttgacagtagcatagaagagttaggtaatgaattcttcgattatctagtgtcaatatcatttttccaacaatcagtaattatgccattatggtc |
6141959 |
T |
|
| Q |
299 |
tggtaagtactatttcatcatgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaattctgcttacgaatagagggtgtgaaagtgcaagat |
398 |
Q |
| |
|
|||||||||||| |||| |||||||||||||||||||||||||||| ||| || || |||||| | |||||||||| || |||| || ||||||||| |
|
|
| T |
6141958 |
tggtaagtactacttcactatgcatgatcttgtcaatgatttagcgaaatcattgacaagagaatcccgcttacgaatcgaaggtgataacgtgcaagat |
6141859 |
T |
|
| Q |
399 |
atccctcagaggacacgtcacatttggtgctgccttgatttggaagatggtgatagaaaactagagcctgttcaaaaaattaagggactacacagtctga |
498 |
Q |
| |
|
||| | | |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| | |||| || ||||| |||||||| ||||||| |
|
|
| T |
6141858 |
atcaatgaaaggacacgtcacatttggtgttgccttgatttggaagatggtgatagaaaactaaagcatattcataacattaaaggactacagagtctga |
6141759 |
T |
|
| Q |
499 |
tggtacaagcacagggctatggtgaccaacgctttaagataaacaaaaatgtgcagcttaatttgtttttaagactaagatatttgcggatattgtcttt |
598 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||| |||||||||||| |||||||| |
|
|
| T |
6141758 |
tggtagaagcacaaggctatggtgaccaacgctttaagataagcaccgatgtgcagcttaatttgttttttagactaaaatatttgcggatgttgtcttt |
6141659 |
T |
|
| Q |
599 |
caatggttgcaatctcttagagctagttgatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaat |
698 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
6141658 |
caatggttgcaatctcttagagctagctgatgagataagaaatttaaagcttctgcgctatctagacctttcttacacggagattacaagcttacctaat |
6141559 |
T |
|
| Q |
699 |
tccatttgtaagctgtatcatttgcatac |
727 |
Q |
| |
|
|||||||||||||||||| |||||||||| |
|
|
| T |
6141558 |
tccatttgtaagctgtataatttgcatac |
6141530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 8 - 724
Target Start/End: Complemental strand, 6900060 - 6899335
Alignment:
| Q |
8 |
ggttaagatattggagactgatttgtggcgtttacccaagggtgagaacagcatttattcggttttgagaatgagttaccttagcctcccctacaatctg |
107 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||| ||||| | |||| |||| | | | |||| | |||||||||||| |||||| | ||||||| |
|
|
| T |
6900060 |
ggttaagatgttggagactgatttctggcgtttaccagagggtaataacaacattaaccctttattgaaattgagttaccttaacctcccttccaatctg |
6899961 |
T |
|
| Q |
108 |
aagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaagctttggatggcacaaggtttgctaaag---- |
203 |
Q |
| |
|
||||||||||||| |||||||||| ||||||| ||||| ||||||||||| |||| || | |||||||||||||||||||| |||||||||| ||| |
|
|
| T |
6899960 |
aagcattgttttgattattgttctttatttccaaagggctatgagtttgagaagggtgaagtaatcaagctttggatggcagaaggtttgctgaagtgtt |
6899861 |
T |
|
| Q |
204 |
--ggaatagccattaatgaaga---gttgggtaataaattcttcaatgagctagtgtcaatgtcgtttttccaacaatcagcaattatgccattctgggc |
298 |
Q |
| |
|
|||| || || | |||||| |||||||||| |||||||||| || ||||||||||| | |||||||| |||||| ||||||||||||| ||||| |
|
|
| T |
6899860 |
gcggaagagacaaaagtgaagaagagttgggtaatgaattcttcaacgatctagtgtcaataacatttttccagcaatcaacaattatgccattatgggc |
6899761 |
T |
|
| Q |
299 |
tggtaagtactatttcatcatgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaattctgcttacgaatagagggtgtgaaagtgcaagat |
398 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||| |||||||||||| | | ||||||||||||| ||||| |||||||||||| || |||||||| |
|
|
| T |
6899760 |
tggtaaatactacttcatcatgcatgatcttgtatatgatttagcgaaattagtgtcaggagaatttcgcttaagaatagagggtgataacctgcaagat |
6899661 |
T |
|
| Q |
399 |
atccctcagaggacacgtcacatttggtgctgccttgatttggaagatggtgatagaaaactagagcctgttcaaaaaattaagggactacacagtctga |
498 |
Q |
| |
|
|||||| | ||||| || || |||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| |
|
|
| T |
6899660 |
atccctgaaaggacgcgccagatttggtgctgccttgatttggaagatggtgatagaaaactagagcatattcttaaaattaagggactacacagtctga |
6899561 |
T |
|
| Q |
499 |
tggtacaagcacagggctatggtgaccaacgctttaagataaacaaaaatgtgcagcttaatttgtttttaagactaagatatttgcggatattgtcttt |
598 |
Q |
| |
|
||||| ||||||| |||||||| ||||||| |||| ||||| || |||||||||| ||||||||||| |||| ||| |||||||||| | |||||||| |
|
|
| T |
6899560 |
tggtagaagcacaaggctatggcaaccaacgttttaggataagcaccaatgtgcagcataatttgttttcaagagtaaaatatttgcgggtgttgtcttt |
6899461 |
T |
|
| Q |
599 |
caatggttgcaatctcttagagctagttgatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaat |
698 |
Q |
| |
|
| ||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
6899460 |
ctctggttgcaatctcatagagctagctgatgagataagaaatttaaagcttctgcgctatctagacctttcttacaccgagattgcaagcttacctgat |
6899361 |
T |
|
| Q |
699 |
tccatttgtaagctgtatcatttgca |
724 |
Q |
| |
|
|||||||||| ||||||| ||||||| |
|
|
| T |
6899360 |
tccatttgtatgctgtataatttgca |
6899335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 73 - 724
Target Start/End: Original strand, 6591475 - 6592135
Alignment:
| Q |
73 |
tgagaatgagttaccttagcctcccctacaatctgaagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaat |
172 |
Q |
| |
|
||||| |||||||||||| |||||| | ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||| || |||||| |
|
|
| T |
6591475 |
tgagattgagttaccttaacctcccatccaatctgaagcgttgttttgcttattgttctatatttcccaagggctatgagtttgagaagggtgaattaat |
6591574 |
T |
|
| Q |
173 |
caagctttggatggcacaaggtttgctaaag----ggaatagccattaa--tgaaga---gttgggtaataaattcttcaatgagctagtgtcaatgtcg |
263 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| || | || || || |||||| |||||| ||| ||||||||||| | ||||||||||| ||| |
|
|
| T |
6591575 |
caagctttggatggcagaaggcttgctaaagtgttgggaaagacacaaaagtgaagaaaagttgggcaatgaattcttcaatcatctagtgtcaatatcg |
6591674 |
T |
|
| Q |
264 |
tttttccaacaatcagcaattatgccattctgggctggtaagtactatttcatcatgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaat |
363 |
Q |
| |
|
|||||||||||||||| || ||||||||| |||||||| ||| |||| |||||||||||||||||||||||||||||||| | ||| |||||||||||| |
|
|
| T |
6591675 |
tttttccaacaatcagtaactatgccattatgggctggcaagcactacttcatcatgcatgatcttgtcaatgatttagcaaaatcagtgtcaggagaat |
6591774 |
T |
|
| Q |
364 |
tctgcttacgaatagagggtgtgaaagtgcaagatatccctcagaggacacgtcacatttggtgctgccttgatttggaagatggtgatagaaaactaga |
463 |
Q |
| |
|
|||||||| ||||||||||| || ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
6591775 |
tctgcttagaaatagagggtggcaacgtgcaagatatccctaataggacacgtcatatttggtgctgccttgatttggaagatggtgatagaaaactgaa |
6591874 |
T |
|
| Q |
464 |
gcctgttcaaaaaattaagggactacacagtctgatggtacaagcacagggctatggtgaccaacgctttaagataaacaaaaatgtgcagcttaatttg |
563 |
Q |
| |
|
|| |||| |||||||| ||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| || | |||||||| ||||||| |
|
|
| T |
6591875 |
gcagattcataaaattaaaggactacacagtctgatggtagaagcacaaggctatggtgaaaaacgctttaagataagcaccagtgtgcagcataatttg |
6591974 |
T |
|
| Q |
564 |
tttttaagactaagatatttgcggatattgtctttcaatggttgcaatctcttagagctagttgatgagataagaaatttaaagcatctgcgctatctag |
663 |
Q |
| |
|
|||| |||| ||| |||||||||||| ||||| | ||||||||||||| || |||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
6591975 |
ttttcaagaataaaatatttgcggatgttgtccctttctggttgcaatctcgtaaagctagatgatgagataagaaatttaaagcttctgcgctatctag |
6592074 |
T |
|
| Q |
664 |
acctttcttacaccgagattacaagcttacctaattccatttgtaagctgtatcatttgca |
724 |
Q |
| |
|
|||||||| | || |||||| |||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
6592075 |
acctttctaaaactgagattgcaagcttacctaattccatttgtacgctgtataatttgca |
6592135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 8 - 727
Target Start/End: Complemental strand, 6265663 - 6264929
Alignment:
| Q |
8 |
ggttaagatattggagactgatttgtggcgtttacccaagggtgagaacagcatttattcggttttgagaatgagttaccttagcctcccctacaatctg |
107 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||| ||||||| ||| ||||| ||| | | |||| ||| ||||||||||||||| ||||||| |
|
|
| T |
6265663 |
ggttgagatattggagactgatttgtggtgtttacccgagggtgacaactgcattaattttgctctgaggatgcattaccttagcctccctcccaatctg |
6265564 |
T |
|
| Q |
108 |
aagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaagctttggatggcacaaggtttgctaaag---- |
203 |
Q |
| |
|
|||| ||||||||||| ||| |||| |||||||||||||||||||||| ||| || |||||||| ||||||||||||| |||||||| |||| |
|
|
| T |
6265563 |
aagcgttgttttgcttgttggtctaatcttcccaagggttatgagtttgaggagggtgaattaatcaggctttggatggcagaaggtttgttaaattgtt |
6265464 |
T |
|
| Q |
204 |
--ggaatagccatta---atgaagagttgggtaataaattcttcaatgagctagtgtcaatgtcgtttttccaacaatcagcaattatgccattctgggc |
298 |
Q |
| |
|
|||| | || | | |||||||| || ||| |||||||| || | |||||||||||||| |||||||||||||||| | | |||||||| ||| | |
|
|
| T |
6265463 |
gcggaagaaacaaaagcaaagaagagttagggaatgaattcttcgatcaactagtgtcaatgtcatttttccaacaatcagtattgatgccattatggac |
6265364 |
T |
|
| Q |
299 |
tggtaagtactatttcatcatgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaattctgctt------acgaatagagggtgtgaaagtg |
392 |
Q |
| |
|
||||||| ||| || ||||||||||||||||||||||||||||||| ||| |||||||||| ||| | || |||||||||||||| || || |
|
|
| T |
6265363 |
cggtaagtgctactttatcatgcatgatcttgtcaatgatttagcgaaatcagtgtcaggagagttccgattgcgaatacgaatagagggtgataacatg |
6265264 |
T |
|
| Q |
393 |
caagatatccctcagaggacacgtcacatttggtgctgccttgatttggaagatggtgatagaaaactagagcctgttcaaaaaattaagggactacaca |
492 |
Q |
| |
|
||||||| ||| | |||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| |
|
|
| T |
6265263 |
aaagatatacctaaaaggacacgtcacgtatggtgctgccttgatttggaagatggtgatagaaaactagagaatgttaaaaaaatcaagggactacaca |
6265164 |
T |
|
| Q |
493 |
gtctgatggtacaagcacagggctatggtgaccaacgctttaagataaacaaaaatgtgcagcttaatttgtttttaagactaagatatttgcggatatt |
592 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||||||||||| || || |||||||||||||||||||||||||||||| ||||||||| || || |
|
|
| T |
6265163 |
gtctgatggtagaagcacaaggctatggtgaccaacgctttaaggtacgcaccgatgtgcagcttaatttgtttttaagactaaaatatttgcgaatgtt |
6265064 |
T |
|
| Q |
593 |
gtctttcaatggttgcaatctcttagagctagttgatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagctta |
692 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
6265063 |
gtctttctcgggttgcaatctcttagagctagctgatgagataagaaatttaaagcttctgcgctatctagacctttcttacacagagattacaagctta |
6264964 |
T |
|
| Q |
693 |
cctaattccatttgtaagctgtatcatttgcatac |
727 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
6264963 |
cctaattccatttgtaagctgtatagtttgcatac |
6264929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 73 - 724
Target Start/End: Complemental strand, 7749909 - 7749249
Alignment:
| Q |
73 |
tgagaatgagttaccttagcctcccctacaatctgaagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaat |
172 |
Q |
| |
|
||||| ||| |||||||| |||||| | ||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||| ||||| |
|
|
| T |
7749909 |
tgagattgaattaccttaacctcccttccaatctgaagcgttgttttgcttattgttctatatttccaaagggctatgagtttgagaagcgtgggttaat |
7749810 |
T |
|
| Q |
173 |
caagctttggatggcacaaggtttgctaaag------ggaatagccattaatgaaga---gttgggtaataaattcttcaatgagctagtgtcaatgtcg |
263 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| |||| || || | |||||| |||||||||| ||||||||||| | ||||||||||| ||| |
|
|
| T |
7749809 |
caagctttggatggcagaaggcttgctaaagtgttggggaagagacaaaactgaagaacagttgggtaatgaattcttcaattatctagtgtcaatatcg |
7749710 |
T |
|
| Q |
264 |
tttttccaacaatcagcaattatgccattctgggctggtaagtactatttcatcatgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaat |
363 |
Q |
| |
|
|||||||||||||||| || |||||| || ||||||||||| ||||| ||||||||| | |||||||||||||||||||| | ||| |||| ||||||| |
|
|
| T |
7749709 |
tttttccaacaatcagtaactatgcctttatgggctggtaaatactacttcatcatgaacgatcttgtcaatgatttagcaaaatcagtgtcgggagaat |
7749610 |
T |
|
| Q |
364 |
tctgcttacgaatagagggtgtgaaagtgcaagatatccctcagaggacacgtcacatttggtgctgccttgatttggaagatggtgatagaaaactaga |
463 |
Q |
| |
|
|||||||| ||||||||| || || |||||||| |||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7749609 |
tctgcttaagaatagaggatggtaatgtgcaagaaatccctaaaaggacgcgtcacatttggtgctgccttgatttggaagatggtgatagaaaactaga |
7749510 |
T |
|
| Q |
464 |
gcctgttcaaaaaattaagggactacacagtctgatggtacaagcacagggctatggtgaccaacgctttaagataaacaaaaatgtgcagcttaatttg |
563 |
Q |
| |
|
| | |||| |||||||||||||| ||||||||||||||| |||| ||||| | ||||||||||||||||||||||| | | ||| ||| | |||| |
|
|
| T |
7749509 |
tcatattcataaaattaagggactgcacagtctgatggtagaagcgcagggttgtggtgaccaacgctttaagataagccccagtgtacagaaaattttg |
7749410 |
T |
|
| Q |
564 |
tttttaagactaagatatttgcggatattgtctttcaatggttgcaatctcttagagctagttgatgagataagaaatttaaagcatctgcgctatctag |
663 |
Q |
| |
|
|||| |||||||| |||||||| | | ||||| || ||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
7749409 |
ttttcaagactaaaatatttgcaggtgttgtccctctctggttgcaatctcgtagagctagccgatgagataagaaatttaaagcttctgcgctatctag |
7749310 |
T |
|
| Q |
664 |
acctttcttacaccgagattacaagcttacctaattccatttgtaagctgtatcatttgca |
724 |
Q |
| |
|
|||||||| |||| |||||| |||||||||| ||||||||||||| ||||||| ||||||| |
|
|
| T |
7749309 |
acctttctcacactgagattgcaagcttacccaattccatttgtatgctgtataatttgca |
7749249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 73 - 708
Target Start/End: Complemental strand, 6917008 - 6916364
Alignment:
| Q |
73 |
tgagaatgagttaccttagcctcccctacaatctgaagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaat |
172 |
Q |
| |
|
|||||||||||||||||| ||| | | ||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| |||| || |||||| |
|
|
| T |
6917008 |
tgagaatgagttaccttaatctctcttcaaatctgaagcattgttttgcttactgttccatatttcccaagggctatgagtttgagaagggtgaattaat |
6916909 |
T |
|
| Q |
173 |
caagctttggatggcacaaggtttgctaaag------ggaatagccattaatgaaga---gttgggtaataaattcttcaatgagctagtgtcaatgtcg |
263 |
Q |
| |
|
|||||||||||||||| |||||||||| ||| |||| || || | |||||| |||||||||| |||| |||||||| ||||||||||| || |
|
|
| T |
6916908 |
caagctttggatggcagaaggtttgctgaagtgttgtggaagagacaaaagtgaagaagagttgggtaatgaatttttcaatgatctagtgtcaatatca |
6916809 |
T |
|
| Q |
264 |
tttttccaacaatcagcaattatgccattctgggctggtaagtactatttcatcatgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaat |
363 |
Q |
| |
|
|||||||||| ||||| |||||||||| ||||| |||||| |||| || |||||||||||||||||||||||||||| | ||| |||| ||||||| |
|
|
| T |
6916808 |
tttttccaacgatcagtaattatgccacgatgggcaggtaagcactactttgtcatgcatgatcttgtcaatgatttagcaaaatcagtgtcgggagaat |
6916709 |
T |
|
| Q |
364 |
tctgcttacgaatagagggtgtgaaagtgcaagatatccctcagaggacacgtcacatttggtgctgccttgatttggaagatggtgatagaaaactaga |
463 |
Q |
| |
|
|| |||| ||||||||| ||| || ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
6916708 |
tccgcttccgaatagagagtgaaaacgtgcaagatatccctaaaaggacacgtcatatttggtgctgccttgatttggaagatggtgatagaaaactaaa |
6916609 |
T |
|
| Q |
464 |
gcctgttcaaaaaattaagggactacacagtctgatggtacaagcacagggctatggtgaccaacgctttaagataaacaaaaatgtgcagcttaatttg |
563 |
Q |
| |
|
|| |||| |||||||| ||||||||||||||||||||| ||||||| |||||||||||| |||||| ||||||| || ||||||| | ||||||| |
|
|
| T |
6916608 |
gcagattcataaaattaaaggactacacagtctgatggtagaagcacaaggctatggtgacaaacgctataagataggcatcgatgtgcaacgtaatttg |
6916509 |
T |
|
| Q |
564 |
tttttaagactaagatatttgcggatattgtctttcaatggttgcaatctcttagagctagttgatgagataagaaatttaaagcatctgcgctatctag |
663 |
Q |
| |
|
| || ||||||| |||||||||||| || |||||| ||||||||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
6916508 |
tattcaagactacaatatttgcggatgttatctttccatggttgcagtctctcggagctagcagatgagataagaaatttaaagcttctgcgctatctag |
6916409 |
T |
|
| Q |
664 |
acctttcttacaccgagattacaagcttacctaattccatttgta |
708 |
Q |
| |
|
| ||||| ||||| ||||||||||||||||| | |||| |||||| |
|
|
| T |
6916408 |
atctttcgtacactgagattacaagcttaccgatttccgtttgta |
6916364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 13 - 724
Target Start/End: Original strand, 6722156 - 6722861
Alignment:
| Q |
13 |
agatattggagactgatttgtggcgtttacccaagggtgagaacagcatttattcggttttgagaatgagttaccttagcctcccctacaatctgaagca |
112 |
Q |
| |
|
||||||||||||||||||||||| ||||| | |||||||||||| |||| | | || | ||| |||||| | ||| |||||| | | ||||||||| |
|
|
| T |
6722156 |
agatattggagactgatttgtggtgtttatcagagggtgagaacaacattaaccccgtactaagattgagtttctttaacctcccttccgatctgaagcg |
6722255 |
T |
|
| Q |
113 |
ttgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaagctttggatggcacaaggtttgctaaag------gga |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||| ||| || | |||| |||||||||||| || ||| |||| | ||| ||| |
|
|
| T |
6722256 |
ttgttttgcttattgttctatatttcccaagggctatgagtttgagaagagtgaactaattaagctttggatgacagaagatttgttgaagtgttgcgga |
6722355 |
T |
|
| Q |
207 |
atagccattaatgaa---gagttgggtaataaattcttcaatgagctagtgtcaatgtcgtttttccaacaatcagcaattatgccattctgggctggta |
303 |
Q |
| |
|
| || || | |||| |||||||||||| ||||||| || | ||||||||||| || ||||||| | | ||||||||| |||| ||||| |
|
|
| T |
6722356 |
agagacaaaagtgaacaagagttgggtaatgaattctttgatcatctagtgtcaatatcatttttccta---------agtatgccattatgggatggta |
6722446 |
T |
|
| Q |
304 |
agtactatttcatcatgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaattctgcttacgaatagagggtgtgaaagtgcaagatatccc |
403 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||| | ||| |||||||||||||||| || || ||||| |||| || |||||||||||| | |
|
|
| T |
6722447 |
agtacta------catgcatgatcttgttaatgatttagccaattcagtgtcaggagaattctgtttccgtatagaaggtgaaaatgtgcaagatatctc |
6722540 |
T |
|
| Q |
404 |
tcagaggacacgtcacatttggtgctgccttgatttggaagatggtgatagaaaactagagcctgttcaaaaaattaagggactacacagtctgatggta |
503 |
Q |
| |
|
| ||||||||| ||||||||||||||||||||||| | |||||||| ||||||||||||| | |||| ||| ||| ||||||| ||||||||||||| |
|
|
| T |
6722541 |
agaaaggacacgtaacatttggtgctgccttgatttgaaggatggtgacagaaaactagagcatattcacaaagttactggactacgcagtctgatggta |
6722640 |
T |
|
| Q |
504 |
caagcacagggctatggtgaccaacgctttaagataaacaaaaatgtgcagcttaatttgtttttaagactaagatatttgcggatattgtctttcaatg |
603 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| || |||||||||| ||||||||||| |||||||| |||||||||||| |||||||| || |
|
|
| T |
6722641 |
gaagcacagggctacggtgaccaacgctttaagataagcaccaatgtgcagcataatttgttttcaagactaaaatatttgcggatgctgtctttctctg |
6722740 |
T |
|
| Q |
604 |
gttgcaatctcttagagctagttgatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaattccat |
703 |
Q |
| |
|
||||||| |||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||| ||||| || ||| |||||||||||||||||| |
|
|
| T |
6722741 |
gttgcaacctcttagagctatccgatgagataaggaatttaaagcttttgcgctatctagacctttcctacactgacattgtaagcttacctaattccat |
6722840 |
T |
|
| Q |
704 |
ttgtaagctgtatcatttgca |
724 |
Q |
| |
|
||||| ||| ||| ||||||| |
|
|
| T |
6722841 |
ttgtatgctatataatttgca |
6722861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 417 - 721
Target Start/End: Complemental strand, 6882070 - 6881766
Alignment:
| Q |
417 |
cacatttggtgctgccttgatttggaagatggtgatagaaaactagagcctgttcaaaaaattaagggactacacagtctgatggtacaagcacagggct |
516 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||| | |||| | | ||| ||||||| |||| |||| ||| | |||||||||| |
|
|
| T |
6882070 |
cacatttggtgctgccttgattttgaagatggtgatagaaaactagagtatcttcatagatgtaatggactacgcagtttgatagtagacgcacagggct |
6881971 |
T |
|
| Q |
517 |
atggtgaccaacgctttaagataaacaaaaatgtgcagcttaatttgtttttaagactaagatatttgcggatattgtctttcaatggttgcaatctctt |
616 |
Q |
| |
|
||||| ||| ||||||||||||| || |||||| | ||||||||||| |||| ||| | ||||||||| ||||| ||| ||||||||| ||||| |
|
|
| T |
6881970 |
atggtccccaccgctttaagataagcaccgttgtgcaacataatttgttttcaagagtaaaacttttgcggatgttgtccttctctggttgcaacctctt |
6881871 |
T |
|
| Q |
617 |
agagctagttgatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaattccatttgtaagctgtat |
716 |
Q |
| |
|
| ||||| ||||| ||||||||||||||||| |||||||||||| |||||||| |||| |||||| |||||||||||||||||||||||| | ||||| |
|
|
| T |
6881870 |
actgctagatgatgggataagaaatttaaagcttctgcgctatctggacctttcgcacactgagattgcaagcttacctaattccatttgtatgttgtat |
6881771 |
T |
|
| Q |
717 |
cattt |
721 |
Q |
| |
|
|||| |
|
|
| T |
6881770 |
aattt |
6881766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 10 - 359
Target Start/End: Complemental strand, 6882474 - 6882116
Alignment:
| Q |
10 |
ttaagatattggagactgatttgtggcgtttacccaagggtgagaacagcatttattcggttttgagaatgagttaccttagcctcccctacaatctgaa |
109 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| ||||||| | | |||| | | | | ||||| |||||||||||| |||||| | ||||||||| |
|
|
| T |
6882474 |
ttaaggtattggagactgatttgtggcgtttacccgagggtgaaatctacattaacttgttactgagattgagttaccttatcctcccttccaatctgaa |
6882375 |
T |
|
| Q |
110 |
gcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaagctttggatggcacaaggtttgctaaaggg---- |
205 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| |||||| |||| |||| || | |||| || |||||||||||| |||||||| | ||| | |
|
|
| T |
6882374 |
gcgttgttttgcttattgttctatatttcccaagggctatgagcttgagaagggtgaactaattaaactttggatggcagaaggtttgttgaagtgtcac |
6882275 |
T |
|
| Q |
206 |
--aatagccatta---atgaagagttgggtaataaattcttcaatgagctagtgtcaatgtcgtttttccaacaatcagcaattatgccattctgggctg |
300 |
Q |
| |
|
|| || || | | ||||||| |||||| ||||||||||| | | |||||||| || |||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
6882274 |
aaaagagacaaaagcgaacaagagttaggtaatgaattcttcaatcatttggtgtcaatatcttttttccaacaatcagtaattatgccattatgggctg |
6882175 |
T |
|
| Q |
301 |
gtaagtactatttcatcatgcatgatcttgtcaatgatttagcgacgtcaatgtcagga |
359 |
Q |
| |
|
|| ||||| ||| |||||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
6882174 |
acaaatactacttcgtcatgcatgatcttgtcaatgatttagcgaaatcaatggcagga |
6882116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 316 - 724
Target Start/End: Complemental strand, 5280308 - 5279897
Alignment:
| Q |
316 |
tcatgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaattctgcttacgaatagagggtgtgaaagtgcaagatatccctcagaggacacg |
415 |
Q |
| |
|
|||||||||||||||||| ||||||||| | ||| ||||||||||||| | |||||||||||||||| | ||||||||||||||| | || |||| |
|
|
| T |
5280308 |
tcatgcatgatcttgtcattgatttagcaagatcagtgtcaggagaattttctttacgaatagagggtgatagggtgcaagatatccctgaaagagcacg |
5280209 |
T |
|
| Q |
416 |
tcacatttggtgctgccttgatttggaagatggtgatagaaaactagagcctgttcaaaaaattaagggactacacagtctgatggtacaagcacagggc |
515 |
Q |
| |
|
|| |||||||||| ||||||| | || ||||| |||||||| ||||| | || || ||||||||| ||| |||| ||| |||| ||| ||| ||| |
|
|
| T |
5280208 |
ccatatttggtgctctcttgattggaaatatggttatagaaaattagagaatatttgtaagattaagggattacgcagtttgaaggtagaagaacaaggc |
5280109 |
T |
|
| Q |
516 |
tatggtgaccaacgctttaagataaacaaaaatgtgcagcttaatttgtttttaagactaagatatttgcggatattgtctttcaatggttg---caatc |
612 |
Q |
| |
|
|||| ||| ||| |||| |||||| ||| |||||||| || | |||||| ||| |||| ||||||||| || || | ||| ||||||| |||| |
|
|
| T |
5280108 |
tatgatgagcaatgcttcaagatatgcaagaatgtgcaaattgaactgttttcaagtctaaaatatttgcgtatgttaacattctatggttgtaataatc |
5280009 |
T |
|
| Q |
613 |
tcttagagctagttgatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaattccatttgtaagct |
712 |
Q |
| |
|
||| ||||||| ||| |||||||| || ||||||| |||| | |||||||||||||||||||| | ||||||||| ||||| ||||||||||| | | |
|
|
| T |
5280008 |
tctccgagctagctgacgagataagcaacttaaagcttctgtgttatctagacctttcttacactggaattacaagcctacctgattccatttgtgtgtt |
5279909 |
T |
|
| Q |
713 |
gtatcatttgca |
724 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
5279908 |
gtataatttgca |
5279897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 578 - 731
Target Start/End: Complemental strand, 6238149 - 6237993
Alignment:
| Q |
578 |
atatttgcggatattgtctttcaatggttgcaatctcttagagctagttgatga---gataagaaatttaaagcatctgcgctatctagacctttcttac |
674 |
Q |
| |
|
|||||||||||| |||||| || ||||| |||||| |||||||||| |||||| ||||||||||||||||| | || |||||||||||||||||||| |
|
|
| T |
6238149 |
atatttgcggatgttgtctatctctggttccaatcttttagagctagctgatgatctgataagaaatttaaagcttttgtgctatctagacctttcttac |
6238050 |
T |
|
| Q |
675 |
accgagattacaagcttacctaattccatttgtaagctgtatcatttgcatacgctc |
731 |
Q |
| |
|
|| || |||||||||||||||||||||||||| | | ||||| |||||||||||||| |
|
|
| T |
6238049 |
actgaaattacaagcttacctaattccatttgcatgttgtataatttgcatacgctc |
6237993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 8569094 - 8569219
Alignment:
| Q |
72 |
ttgagaatgagttaccttagcctcccctacaatctgaagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaa |
171 |
Q |
| |
|
|||||| ||||||||| || ||||| | |||||| |||| ||||||||| |||||||| || ||||||||||||||||| |||||||| |||| ||| | |
|
|
| T |
8569094 |
ttgagattgagttaccataatctcccttccaatctcaagcgttgttttgcctattgttcaatttttcccaagggttatgaatttgaaaaagatgaattga |
8569193 |
T |
|
| Q |
172 |
tcaagctttggatggcacaaggtttg |
197 |
Q |
| |
|
||||||||||||||||| |||||||| |
|
|
| T |
8569194 |
tcaagctttggatggcagaaggtttg |
8569219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 72 - 199
Target Start/End: Complemental strand, 7587755 - 7587628
Alignment:
| Q |
72 |
ttgagaatgagttaccttagcctcccctacaatctgaagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaa |
171 |
Q |
| |
|
|||||| ||||||||| || ||||| | |||||| |||| ||||||||| | |||||| ||||||||||||||||||| |||||||| |||| ||| | |
|
|
| T |
7587755 |
ttgagattgagttaccataatctcccatccaatctaaagcgttgttttgccttttgttcaatatttcccaagggttatgtatttgaaaaagatgaattga |
7587656 |
T |
|
| Q |
172 |
tcaagctttggatggcacaaggtttgct |
199 |
Q |
| |
|
||||||||||||||||| |||||||||| |
|
|
| T |
7587655 |
tcaagctttggatggcagaaggtttgct |
7587628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 13 - 197
Target Start/End: Original strand, 6520252 - 6520436
Alignment:
| Q |
13 |
agatattggagactgatttgtggcgtttacccaagggtgagaacagcatttattcggttttgagaatgagttaccttagcctcccctacaatctgaagca |
112 |
Q |
| |
|
||||||||||||||||| ||||||||||| | | | || ||| |||| | || || |||||| ||||||||| || ||||| | |||||| |||| |
|
|
| T |
6520252 |
agatattggagactgatatgtggcgtttatcagacagagaccacaccattaactcagtattgagattgagttaccataatctcccttccaatctaaagcg |
6520351 |
T |
|
| Q |
113 |
ttgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaagctttggatggcacaaggtttg |
197 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||| | ||| |||| ||| ||| |||||||||||||||||| |||||||| |
|
|
| T |
6520352 |
ttgttttgcatattgttctatttttcccaagggttataaatttaaaaaagataaattgatcaagctttggatggcagaaggtttg |
6520436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 72 - 199
Target Start/End: Complemental strand, 8471444 - 8471317
Alignment:
| Q |
72 |
ttgagaatgagttaccttagcctcccctacaatctgaagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaa |
171 |
Q |
| |
|
|||||| ||||||||| || |||||| | |||||||||| |||||||| || || ||||||||||| ||||||| ||||||||| | ||||| ||| | |
|
|
| T |
8471444 |
ttgagattgagttaccataacctcccttctaatctgaagcgctgttttgcctactgctctatatttcctaagggttttgagtttgacagggatgaattga |
8471345 |
T |
|
| Q |
172 |
tcaagctttggatggcacaaggtttgct |
199 |
Q |
| |
|
||||||||||||||||| |||||||||| |
|
|
| T |
8471344 |
tcaagctttggatggcagaaggtttgct |
8471317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 618 - 724
Target Start/End: Original strand, 6480671 - 6480777
Alignment:
| Q |
618 |
gagctagttgatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaattccatttgtaagctgtatc |
717 |
Q |
| |
|
|||||||||||||||||||| ||| |||| | | |||||||||| |||||||||| ||| |||||||||||||||||| || |||||||| | ||||| |
|
|
| T |
6480671 |
gagctagttgatgagataagcaatataaaacttttgcgctatcttgacctttctttcactgagattacaagcttacctgatagcatttgtatgttgtata |
6480770 |
T |
|
| Q |
718 |
atttgca |
724 |
Q |
| |
|
||||||| |
|
|
| T |
6480771 |
atttgca |
6480777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 611 - 721
Target Start/End: Complemental strand, 8589088 - 8588978
Alignment:
| Q |
611 |
tctcttagagctagttgatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaattccatttgtaag |
710 |
Q |
| |
|
||||| |||||||||| |||||||||| |||||||| | | |||| |||||||||||||||||||| |||||||||||||||| || ||||||||| | |
|
|
| T |
8589088 |
tctctcagagctagttaatgagataagcaatttaaaacttttgcgttatctagacctttcttacactttgattacaagcttacctgataccatttgtatg |
8588989 |
T |
|
| Q |
711 |
ctgtatcattt |
721 |
Q |
| |
|
||||| |||| |
|
|
| T |
8588988 |
ttgtataattt |
8588978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 8589671 - 8589485
Alignment:
| Q |
10 |
ttaagatattggagactgatttgtggcgtttacccaagggtgagaacagcatttattcggttttgagaatgagttaccttagcctcccctacaatctgaa |
109 |
Q |
| |
|
||||||||||||||||| || ||||||||||| | | || || ||||||| | || ||| ||||| | ||||||| || ||||| | || ||| || |
|
|
| T |
8589671 |
ttaagatattggagactaatatgtggcgtttatcagatggggaacacagcataaactcagttctgagattaagttaccataatctcccttccattctaaa |
8589572 |
T |
|
| Q |
110 |
gcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaagctttggatggcacaaggttt |
196 |
Q |
| |
|
|||||| ||| |||||||||| || ||||||||||||||||| |||||||| | || ||| |||||||| ||||||||| ||||||| |
|
|
| T |
8589571 |
gcattgcttttcttattgttccatttttcccaagggttatgaatttgaaaaaggtgaattgatcaagctctggatggcagaaggttt |
8589485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 611 - 724
Target Start/End: Complemental strand, 6946625 - 6946512
Alignment:
| Q |
611 |
tctcttagagctagttgatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaattccatttgtaag |
710 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||||| | |||| ||||||||||||||| |||| | |||||||| ||||| |||| ||||||| | |
|
|
| T |
6946625 |
tctctcagagctagttgatgagataagcaatttaaagcttttgcgttatctagacctttctcacactaatattacaaggttacccgattctatttgtatg |
6946526 |
T |
|
| Q |
711 |
ctgtatcatttgca |
724 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
6946525 |
ttgtataatttgca |
6946512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 602 - 721
Target Start/End: Original strand, 6520832 - 6520951
Alignment:
| Q |
602 |
tggttgcaatctcttagagctagttgatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaattcc |
701 |
Q |
| |
|
||||||| ||||| |||||| || ||||||||||| |||||||| | | |||| ||||||||||||||||||| ||||| ||||||||||| || || |
|
|
| T |
6520832 |
tggttgccttctctcagagcttgtggatgagataagcaatttaaaacttttgcgttatctagacctttcttacaataagattgcaagcttacctgatacc |
6520931 |
T |
|
| Q |
702 |
atttgtaagctgtatcattt |
721 |
Q |
| |
|
||||||| ||||||| |||| |
|
|
| T |
6520932 |
atttgtatgctgtataattt |
6520951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 640 - 699
Target Start/End: Complemental strand, 6850304 - 6850245
Alignment:
| Q |
640 |
atttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaatt |
699 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
6850304 |
atttaaagcttctgcgctatctagacctttcttacactgagattacaagcatacctaatt |
6850245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 603 - 721
Target Start/End: Complemental strand, 6735318 - 6735200
Alignment:
| Q |
603 |
ggttgcaatctcttagagctagttgatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaattcca |
702 |
Q |
| |
|
|||||| |||||| |||||| || ||||||||||| |||||||| | | |||| |||||||||||||| ||||| |||||| |||||||||| || ||| |
|
|
| T |
6735318 |
ggttgctatctctcagagcttgtggatgagataagcaatttaaaacttttgcgttatctagacctttcatacactaagattagaagcttacctgatacca |
6735219 |
T |
|
| Q |
703 |
tttgtaagctgtatcattt |
721 |
Q |
| |
|
|||||| | ||||| |||| |
|
|
| T |
6735218 |
tttgtatgttgtataattt |
6735200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 6839047 - 6839180
Alignment:
| Q |
66 |
tcggttttgagaatgagttaccttagcctcccctacaatctgaagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatg |
165 |
Q |
| |
|
|||| ||||||| ||||||||| || |||||| | || | |||| | |||||||| || |||||| ||||||| | ||||| ||||||||| | ||||| |
|
|
| T |
6839047 |
tcggctttgagattgagttaccataacctcccttccagtttgaaacgctgttttgcctactgttctgtatttcctaggggttttgagtttgacagggatg |
6839146 |
T |
|
| Q |
166 |
gattaatcaagctttggatggcacaaggtttgct |
199 |
Q |
| |
|
||| |||||||||||||||||| |||||||||| |
|
|
| T |
6839147 |
aattgatcaagctttggatggcagaaggtttgct |
6839180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 6947120 - 6947024
Alignment:
| Q |
101 |
caatctgaagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaagctttggatggcacaaggtttg |
197 |
Q |
| |
|
||||| ||||| ||||||||| ||||| || || ||||||||||||||| |||||||| |||| ||| |||||||||||||||||| |||||||| |
|
|
| T |
6947120 |
caatcggaagcgttgttttgcctattgctccatttttcccaagggttatacatttgaaaaagatgaattgatcaagctttggatggcagaaggtttg |
6947024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 559 - 676
Target Start/End: Complemental strand, 8454059 - 8453942
Alignment:
| Q |
559 |
atttgtttttaagactaagatatttgcggatattgtctttcaatggttgcaatctcttagagctagttgatgagataagaaatttaaagcatctgcgcta |
658 |
Q |
| |
|
||||||||| |||||||| | ||||||||| || || || | |||||| ||||||||| ||||||||||||||||| |||||||| | | |||| || |
|
|
| T |
8454059 |
atttgttttcaagactaaattttttgcggatgttatcatttagaggttgcggtctcttagaactagttgatgagataagcaatttaaaacttttgcgtta |
8453960 |
T |
|
| Q |
659 |
tctagacctttcttacac |
676 |
Q |
| |
|
||||||||| |||||||| |
|
|
| T |
8453959 |
tctagacctctcttacac |
8453942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 318 - 453
Target Start/End: Complemental strand, 5298371 - 5298236
Alignment:
| Q |
318 |
atgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaattctgcttacgaatagagggtgtgaaagtgcaagatatccctcagaggacacgtc |
417 |
Q |
| |
|
||||||||||||||||| |||||||| | ||| |||| |||||||| || || |||||||||||| | ||||||||| ||| | |||||||||| |
|
|
| T |
5298371 |
atgcatgatcttgtcaacgatttagcaaaatcagtgtcgggagaattttgtttgagaatagagggtgattgggagcaagatattcctgaaaggacacgtc |
5298272 |
T |
|
| Q |
418 |
acatttggtgctgccttgatttggaagatggtgata |
453 |
Q |
| |
|
|||||||||||| ||||| || |||||||||||| |
|
|
| T |
5298271 |
acatttggtgctctcttgaattaaaagatggtgata |
5298236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 645 - 705
Target Start/End: Complemental strand, 5263100 - 5263040
Alignment:
| Q |
645 |
aagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaattccattt |
705 |
Q |
| |
|
|||| |||||| |||||||||||||||||||| | |||||||||| ||||| ||||||||| |
|
|
| T |
5263100 |
aagcttctgcgttatctagacctttcttacactgggattacaagcctacctgattccattt |
5263040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 626 - 721
Target Start/End: Complemental strand, 5267391 - 5267296
Alignment:
| Q |
626 |
tgatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaattccatttgtaagctgtatcattt |
721 |
Q |
| |
|
|||||||||||| |||||||||| | |||| ||||||||||| ||| ||| |||||| ||| || ||| ||||||||||||| |||||| |||| |
|
|
| T |
5267391 |
tgatgagataagcaatttaaagcttttgcgttatctagacctgtctctcacaaagattaaaaggttgcctgattccatttgtaacctgtataattt |
5267296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 610 - 671
Target Start/End: Original strand, 6449468 - 6449529
Alignment:
| Q |
610 |
atctcttagagctagttgatgagataagaaatttaaagcatctgcgctatctagacctttct |
671 |
Q |
| |
|
|||||| ||||||||| ||||||||||| |||||||||| | | || ||||||||||||||| |
|
|
| T |
6449468 |
atctctcagagctagtggatgagataagcaatttaaagcttttacgttatctagacctttct |
6449529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 199
Target Start/End: Original strand, 6554525 - 6554714
Alignment:
| Q |
10 |
ttaagatattggagactgatttgtggcgtttacccaagggtgagaacagcatttattcggttttgagaatgagttaccttagcctcccctacaatctgaa |
109 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| | | || || ||| |||| | || || | ||| ||||||||| || ||||| | |||| || |
|
|
| T |
6554525 |
ttaagatattggagactgatatgtggcgtttatcagatggggaccacaacattaactcagtactaagattgagttaccataatctcccttcggatctaaa |
6554624 |
T |
|
| Q |
110 |
gcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaagctttggatggcacaaggtttgct |
199 |
Q |
| |
|
|| ||| ||||| |||||||| || || |||||||| ||| |||||||| || | ||| |||||||||||||||||| |||||||||| |
|
|
| T |
6554625 |
gcgttgctttgcgtattgttccattttccccaagggctatagatttgaaaaagaagtattgatcaagctttggatggcagaaggtttgct |
6554714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 6735932 - 6735743
Alignment:
| Q |
10 |
ttaagatattggagactgatttgtggcgtttacccaagggtgagaacagcatttattcggttttgagaatgagttaccttagcctcccctacaatctgaa |
109 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| | | || || ||| |||| | || || | ||| ||||||||| || ||||| | |||| || |
|
|
| T |
6735932 |
ttaagatattggagactgatatgtggcgtttatcagatggggaccacaacattaactcagtactaagattgagttaccataatctcccatcagatctaaa |
6735833 |
T |
|
| Q |
110 |
gcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaagctttggatggcacaaggtttgct |
199 |
Q |
| |
|
|| ||| ||||| |||||||| || || |||||||||||| ||| |||| || | ||| |||||||||||||||||| |||||||||| |
|
|
| T |
6735832 |
gcgttgctttgcctattgttccattttccccaagggttatagatttaaaaaagaagtattgatcaagctttggatggcagaaggtttgct |
6735743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 384
Target Start/End: Complemental strand, 6735632 - 6735564
Alignment:
| Q |
316 |
tcatgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaattctgcttacgaatagagggtg |
384 |
Q |
| |
|
|||||||||||||||||||||||||| | | ||| ||||||||||||| || || | ||||||||||| |
|
|
| T |
6735632 |
tcatgcatgatcttgtcaatgatttaacaaaatcagtgtcaggagaattttgtttgcaaatagagggtg |
6735564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 6480197 - 6480256
Alignment:
| Q |
138 |
cccaagggttatgagtttgaaaaggatggattaatcaagctttggatggcacaaggtttg |
197 |
Q |
| |
|
|||||||||||| |||||||| |||| ||| |||||||||||||||||| |||||||| |
|
|
| T |
6480197 |
cccaagggttatacatttgaaaaagatgaattgatcaagctttggatggcagaaggtttg |
6480256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 8589370 - 8589323
Alignment:
| Q |
317 |
catgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaatt |
364 |
Q |
| |
|
||||||||||||||||||||||||||| | ||| ||||||||||||| |
|
|
| T |
8589370 |
catgcatgatcttgtcaatgatttagcaaaatcagtgtcaggagaatt |
8589323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 610 - 724
Target Start/End: Original strand, 6555146 - 6555260
Alignment:
| Q |
610 |
atctcttagagctagttgatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaattccatttgtaa |
709 |
Q |
| |
|
|||||| |||||| || ||||||||| |||| |||| | | |||| |||||||||||| | ||||| | |||| |||||||||| || ||||||||| |
|
|
| T |
6555146 |
atctctcagagcttgtggatgagataggaaagctaaaacttttgcgttatctagaccttacatacactggtattaaaagcttacctgataccatttgtat |
6555245 |
T |
|
| Q |
710 |
gctgtatcatttgca |
724 |
Q |
| |
|
| ||||| ||||||| |
|
|
| T |
6555246 |
gttgtataatttgca |
6555260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 627 - 721
Target Start/End: Original strand, 8569655 - 8569749
Alignment:
| Q |
627 |
gatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaattccatttgtaagctgtatcattt |
721 |
Q |
| |
|
||||||||| | |||||||||| | ||||||||||||| || || ||| ||||||| ||| || ||| |||||||||||||| ||||| |||| |
|
|
| T |
8569655 |
gatgagatatgcaatttaaagcttttgcgctatctagatctgactcgcacagagattaaaaggttgcctgattccatttgtaagttgtataattt |
8569749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 318 - 427
Target Start/End: Complemental strand, 5267696 - 5267587
Alignment:
| Q |
318 |
atgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaattctgcttacgaatagagggtgtgaaagtgcaagatatccctcagaggacacgtc |
417 |
Q |
| |
|
||||| |||||| ||||||||||||| |||||| |||||||||| ||||| |||||||| |||| | ||| ||||| |||| | |||||||| | |
|
|
| T |
5267696 |
atgcacgatcttatcaatgatttagcacaatcaatggcaggagaattttgcttgcgaatagaaggtgatagggtggaagatttccccgaaaggacacgac |
5267597 |
T |
|
| Q |
418 |
acatttggtg |
427 |
Q |
| |
|
|||||||||| |
|
|
| T |
5267596 |
acatttggtg |
5267587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 6520564 - 6520633
Alignment:
| Q |
316 |
tcatgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaattctgcttacgaatagagggtgt |
385 |
Q |
| |
|
|||||||||||||||||||||||||||| | ||| ||||| ||||||| || | | |||||||||||| |
|
|
| T |
6520564 |
tcatgcatgatcttgtcaatgatttagcaaaatcagtgtcaagagaattttgtatgcaaatagagggtgt |
6520633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 377; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 8 - 731
Target Start/End: Original strand, 35140426 - 35141159
Alignment:
| Q |
8 |
ggttaagatattggagactgatttgtggcgtttacccaagggtgagaacagcat---ttattcggttttgagaatgagttaccttagcctcccctacaat |
104 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||| | ||||| |||||| ||| ||||||||||||||||||||||||| | |||| |
|
|
| T |
35140426 |
ggttaagatattggagactgatttgcggcgtttacccaagggtgacagcagcaacaattattccgttctgagaatgagttaccttagcctcccttccaat |
35140525 |
T |
|
| Q |
105 |
ctgaagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaagctttggatggcacaaggtttgctaaagg |
204 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
35140526 |
ctgaagcattgttttgcatattattctatatttcccaagggttatgagtttgaaaatgatggattaatcaagctttggatgacagaaggtttgctaaagg |
35140625 |
T |
|
| Q |
205 |
g------aatagccattaatgaag---agttgggtaataaattcttcaatgagctagtgtcaatgtcgtttttccaacaatcagcaattatgccattctg |
295 |
Q |
| |
|
| |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
35140626 |
gttgggaaatagccaaaaatgaagaagagttgggtaataaattcttcaatgatctagtgtcaatgtcgtttttccaaaaatcagcaattctgccattctg |
35140725 |
T |
|
| Q |
296 |
ggctggtaagtactatttcatcatgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaattctgcttacgaatagagggtgtgaaagtgcaa |
395 |
Q |
| |
|
||||||||||| |||||||||| ||||||||||| ||||||||||| ||| ||||||| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
35140726 |
ggctggtaagtgctatttcatcgtgcatgatcttatcaatgatttaatgacatcaatgttaggagaatttcgcttacgaatagagggtgtgaaagtgcaa |
35140825 |
T |
|
| Q |
396 |
gatatccctcagaggacacgtcacatttggtgctgccttgatttggaagatggtgatagaaaactagagcctgttcaaaaaattaagggactacacagtc |
495 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| || ||||| |||||| | | | |
|
|
| T |
35140826 |
gatatccctcaaaggacatgtcacatttggtgctgccttgatttggaagatggtgatagaaaactaaagcaaattcataacattaaaggactaaagaatt |
35140925 |
T |
|
| Q |
496 |
tgatggtacaagcacagggctatggtgaccaacgctttaagataaacaaaaatgtgcagcttaatttgtttttaagactaagatatttgcggatattgtc |
595 |
Q |
| |
|
|||||||| ||| ||| | | |||||| || |||||||||| || || ||||| | | |||||||| |||||||| |||||||||||| ||||| |
|
|
| T |
35140926 |
tgatggtagaagaacaagtgt-tggtgagaaatactttaagatatccaccaacgtgcatcagagtttgttttcaagactaa-atatttgcggatgttgtc |
35141023 |
T |
|
| Q |
596 |
tttcaatggttgcaatctcttagagctagttgatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacct |
695 |
Q |
| |
|
|||| | |||||||||||| |||||||| ||| |||||| |||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35141024 |
tttctcttgttgcaatctctcagagctagctgaagagataggaaacttaaagcttatgcgctatctagacctttcttacaccgagattacaagcttacct |
35141123 |
T |
|
| Q |
696 |
aattccatttgtaagctgtatcatttgcatacgctc |
731 |
Q |
| |
|
||||||||||||| | ||||| |||||||||||||| |
|
|
| T |
35141124 |
aattccatttgtatgttgtataatttgcatacgctc |
35141159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 66 - 199
Target Start/End: Original strand, 6573438 - 6573571
Alignment:
| Q |
66 |
tcggttttgagaatgagttaccttagcctcccctacaatctgaagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatg |
165 |
Q |
| |
|
||||| |||||| ||||||| | || ||||| | |||||| |||| ||||||||| |||||||| |||||||||||||||||| | |||||||| |||| |
|
|
| T |
6573438 |
tcggtattgagattgagttatcataatctcccttccaatctaaagcgttgttttgcatattgttccatatttcccaagggttataaatttgaaaaagatg |
6573537 |
T |
|
| Q |
166 |
gattaatcaagctttggatggcacaaggtttgct |
199 |
Q |
| |
|
||| ||||| ||||||||||| |||||||||| |
|
|
| T |
6573538 |
aattgatcaacctttggatggctgaaggtttgct |
6573571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 317 - 456
Target Start/End: Original strand, 6573689 - 6573828
Alignment:
| Q |
317 |
catgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaattctgcttacgaatagagggtgtgaaagtgcaagatatccctcagaggacacgt |
416 |
Q |
| |
|
||||||||||||||| ||||||||||| | ||| ||| | |||| ||||||| ||| ||||||| | ||||||||||| || | ||||||||| |
|
|
| T |
6573689 |
catgcatgatcttgtaaatgatttagctaaatcagagtcccaaaaattttgcttacaaattgagggtgatagggtgcaagatatatctgaaaggacacgt |
6573788 |
T |
|
| Q |
417 |
cacatttggtgctgccttgatttggaagatggtgatagaa |
456 |
Q |
| |
|
|| |||||||||| ||||| |||||||||||||| ||||| |
|
|
| T |
6573789 |
catatttggtgctcccttggtttggaagatggtgctagaa |
6573828 |
T |
|
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Target: scaffold0425 (Bit Score: 48; Significance: 5e-18; HSPs: 3)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 640 - 699
Target Start/End: Complemental strand, 13412 - 13353
Alignment:
| Q |
640 |
atttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaatt |
699 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
13412 |
atttaaagcttctgcgctatctagacctttcttacactgagattacaagcatacctaatt |
13353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 603 - 721
Target Start/End: Original strand, 8178 - 8296
Alignment:
| Q |
603 |
ggttgcaatctcttagagctagttgatgagataagaaatttaaagcatctgcgctatctagacctttcttacaccgagattacaagcttacctaattcca |
702 |
Q |
| |
|
|||||| |||||| |||||| || ||||||||||| |||||||| | | |||| |||||||||||||| ||||| |||||| |||||||||| || ||| |
|
|
| T |
8178 |
ggttgctatctctcagagcttgtggatgagataagcaatttaaaacttttgcgttatctagacctttcatacactaagattagaagcttacctgatacca |
8277 |
T |
|
| Q |
703 |
tttgtaagctgtatcattt |
721 |
Q |
| |
|
|||||| | ||||| |||| |
|
|
| T |
8278 |
tttgtatgttgtataattt |
8296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 384
Target Start/End: Original strand, 7864 - 7932
Alignment:
| Q |
316 |
tcatgcatgatcttgtcaatgatttagcgacgtcaatgtcaggagaattctgcttacgaatagagggtg |
384 |
Q |
| |
|
|||||||||||||||||||||||||| | | ||| ||||||||||||| || || | ||||||||||| |
|
|
| T |
7864 |
tcatgcatgatcttgtcaatgatttaacaaaatcagtgtcaggagaattttgtttgcaaatagagggtg |
7932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 79 - 199
Target Start/End: Original strand, 25242289 - 25242409
Alignment:
| Q |
79 |
tgagttaccttagcctcccctacaatctgaagcattgttttgcttattgttctatatttcccaagggttatgagtttgaaaaggatggattaatcaagct |
178 |
Q |
| |
|
||||||||| || ||||| | ||||||||||| ||||||| ||| ||||| |||||||| || ||||||| ||| |||| || |||||||||||| |
|
|
| T |
25242289 |
tgagttaccataatctcccttccaatctgaagcgttgttttagttactgttccatatttcctaaaggttatgctttttgcaagggtgaattaatcaagct |
25242388 |
T |
|
| Q |
179 |
ttggatggcacaaggtttgct |
199 |
Q |
| |
|
|||||| ||| |||| ||||| |
|
|
| T |
25242389 |
ttggatagcataaggcttgct |
25242409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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