View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0157_low_36 (Length: 258)

Name: NF0157_low_36
Description: NF0157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0157_low_36
NF0157_low_36
[»] chr2 (23 HSPs)
chr2 (17-257)||(23076701-23076940)
chr2 (14-257)||(298433-298676)
chr2 (14-255)||(23660283-23660525)
chr2 (14-258)||(27753833-27754078)
chr2 (15-257)||(22737799-22738042)
chr2 (15-257)||(22337374-22337617)
chr2 (15-253)||(22730852-22731091)
chr2 (29-258)||(32451562-32451792)
chr2 (15-257)||(23286120-23286352)
chr2 (14-258)||(20309363-20309597)
chr2 (14-258)||(37745-37979)
chr2 (14-258)||(23654028-23654249)
chr2 (47-198)||(23071614-23071764)
chr2 (14-121)||(28291920-28292027)
chr2 (27-198)||(22133848-22134017)
chr2 (60-198)||(28406298-28406436)
chr2 (161-257)||(23708383-23708480)
chr2 (162-256)||(23207538-23207634)
chr2 (28-105)||(25176254-25176331)
chr2 (162-210)||(22412900-22412948)
chr2 (14-81)||(23100849-23100916)
chr2 (162-253)||(20519957-20520050)
chr2 (212-257)||(23060771-23060815)
[»] chr8 (38 HSPs)
chr8 (14-255)||(23406642-23406884)
chr8 (14-258)||(18878855-18879100)
chr8 (14-258)||(20536466-20536711)
chr8 (14-257)||(18818028-18818271)
chr8 (15-257)||(28648663-28648906)
chr8 (15-257)||(23648812-23649055)
chr8 (14-254)||(21923546-21923787)
chr8 (14-257)||(22626994-22627238)
chr8 (14-238)||(16091959-16092184)
chr8 (15-230)||(6759543-6759759)
chr8 (14-258)||(21918628-21918863)
chr8 (14-254)||(41598446-41598687)
chr8 (14-230)||(22875352-22875568)
chr8 (14-258)||(31971513-31971747)
chr8 (29-175)||(7373090-7373237)
chr8 (14-258)||(16199276-16199509)
chr8 (14-198)||(5865895-5866078)
chr8 (14-198)||(17141233-17141416)
chr8 (38-257)||(25362793-25363002)
chr8 (14-198)||(21249701-21249884)
chr8 (14-198)||(21255539-21255722)
chr8 (14-146)||(21491363-21491495)
chr8 (14-131)||(45130649-45130766)
chr8 (14-106)||(19801045-19801137)
chr8 (27-227)||(26355329-26355529)
chr8 (27-198)||(21674024-21674195)
chr8 (200-257)||(7373029-7373086)
chr8 (190-258)||(45130793-45130861)
chr8 (14-81)||(21389071-21389138)
chr8 (52-225)||(38854907-38855079)
chr8 (57-227)||(39834122-39834292)
chr8 (52-106)||(6520779-6520833)
chr8 (39-81)||(21395626-21395668)
chr8 (39-81)||(21790119-21790161)
chr8 (29-78)||(16409889-16409938)
chr8 (29-78)||(16860971-16861020)
chr8 (29-78)||(20856059-20856108)
chr8 (162-198)||(37116668-37116704)
[»] chr5 (34 HSPs)
chr5 (14-257)||(21985765-21986009)
chr5 (15-254)||(13095756-13095996)
chr5 (14-257)||(25421791-25422035)
chr5 (14-257)||(24493827-24494071)
chr5 (14-257)||(25431653-25431897)
chr5 (14-250)||(24529486-24529724)
chr5 (15-258)||(23390115-23390359)
chr5 (15-257)||(13025569-13025812)
chr5 (14-257)||(9078211-9078455)
chr5 (14-257)||(1096726-1096970)
chr5 (26-258)||(21292611-21292833)
chr5 (14-257)||(22075278-22075511)
chr5 (14-257)||(8286471-8286704)
chr5 (15-232)||(21871190-21871407)
chr5 (15-232)||(21875470-21875687)
chr5 (14-198)||(22119811-22119994)
chr5 (29-254)||(11580878-11581104)
chr5 (14-198)||(19660455-19660639)
chr5 (29-254)||(36154461-36154687)
chr5 (14-257)||(22107002-22107235)
chr5 (14-198)||(24766955-24767138)
chr5 (27-227)||(21565834-21566034)
chr5 (29-227)||(22959166-22959364)
chr5 (27-197)||(19669219-19669390)
chr5 (59-257)||(22144309-22144508)
chr5 (52-256)||(21329151-21329358)
chr5 (161-232)||(21501919-21501989)
chr5 (58-227)||(5888837-5889006)
chr5 (14-74)||(20910430-20910490)
chr5 (163-203)||(20026706-20026746)
chr5 (52-131)||(21498673-21498752)
chr5 (161-227)||(21741308-21741374)
chr5 (15-81)||(37724337-37724403)
chr5 (54-94)||(20026521-20026561)
[»] chr7 (41 HSPs)
chr7 (15-257)||(38227739-38227982)
chr7 (14-258)||(9509447-9509692)
chr7 (14-258)||(12699090-12699335)
chr7 (14-257)||(3563982-3564226)
chr7 (14-258)||(16385876-16386110)
chr7 (14-256)||(15143654-15143898)
chr7 (14-258)||(27847462-27847696)
chr7 (14-258)||(40443647-40443880)
chr7 (14-257)||(26212255-26212488)
chr7 (14-198)||(18302498-18302681)
chr7 (14-198)||(39267264-39267447)
chr7 (29-254)||(17061593-17061819)
chr7 (29-203)||(44116819-44116992)
chr7 (14-198)||(9751168-9751351)
chr7 (14-198)||(2831924-2832106)
chr7 (14-198)||(28504919-28505102)
chr7 (14-198)||(15754505-15754689)
chr7 (29-209)||(12756350-12756529)
chr7 (14-198)||(34201103-34201286)
chr7 (27-203)||(810760-810936)
chr7 (27-227)||(44014464-44014664)
chr7 (67-256)||(16056587-16056778)
chr7 (14-106)||(11995676-11995768)
chr7 (168-258)||(10589296-10589386)
chr7 (59-257)||(12255454-12255653)
chr7 (27-227)||(68036-68236)
chr7 (27-94)||(18006064-18006131)
chr7 (57-232)||(22073201-22073376)
chr7 (14-81)||(19649103-19649170)
chr7 (52-106)||(47832219-47832273)
chr7 (52-232)||(16219372-16219552)
chr7 (29-93)||(2760549-2760613)
chr7 (29-93)||(3272209-3272273)
chr7 (14-86)||(24054897-24054969)
chr7 (162-253)||(15008263-15008356)
chr7 (161-257)||(2279883-2279980)
chr7 (59-100)||(9032931-9032972)
chr7 (28-81)||(18154469-18154522)
chr7 (163-227)||(9389462-9389526)
chr7 (67-131)||(16324392-16324456)
chr7 (161-205)||(21064927-21064971)
[»] chr3 (50 HSPs)
chr3 (14-257)||(18438793-18439037)
chr3 (14-257)||(11424381-11424625)
chr3 (14-252)||(26687151-26687390)
chr3 (14-257)||(25476003-25476247)
chr3 (14-257)||(40213339-40213583)
chr3 (17-257)||(14572847-14573088)
chr3 (14-257)||(14576451-14576695)
chr3 (15-258)||(17488114-17488359)
chr3 (14-257)||(23082979-23083223)
chr3 (14-238)||(14973132-14973357)
chr3 (66-258)||(13442532-13442725)
chr3 (15-258)||(17499596-17499841)
chr3 (14-258)||(20698065-20698299)
chr3 (14-254)||(17247904-17248145)
chr3 (18-254)||(53070321-53070557)
chr3 (14-198)||(12340072-12340255)
chr3 (14-258)||(30030097-30030331)
chr3 (14-198)||(14669080-14669263)
chr3 (124-257)||(43841191-43841325)
chr3 (16-198)||(12851984-12852165)
chr3 (14-257)||(12399468-12399698)
chr3 (14-146)||(14179693-14179825)
chr3 (14-198)||(14665925-14666108)
chr3 (14-198)||(14735438-14735621)
chr3 (14-121)||(43842574-43842681)
chr3 (14-198)||(13209946-13210129)
chr3 (38-150)||(4588457-4588569)
chr3 (18-112)||(17247142-17247236)
chr3 (27-198)||(16097649-16097820)
chr3 (27-203)||(12933941-12934117)
chr3 (27-203)||(32307983-32308158)
chr3 (27-145)||(49389275-49389394)
chr3 (47-152)||(9513274-9513380)
chr3 (47-152)||(9521249-9521355)
chr3 (27-203)||(49667715-49667890)
chr3 (59-232)||(324520-324693)
chr3 (27-203)||(1644314-1644489)
chr3 (29-106)||(12171750-12171827)
chr3 (29-106)||(16104191-16104268)
chr3 (15-121)||(16809785-16809887)
chr3 (14-81)||(15877447-15877514)
chr3 (52-257)||(2050857-2051061)
chr3 (162-232)||(37250932-37251002)
chr3 (188-257)||(16796806-16796875)
chr3 (59-254)||(52523390-52523586)
chr3 (138-257)||(42386670-42386790)
chr3 (161-227)||(1465174-1465240)
chr3 (28-106)||(15471335-15471413)
chr3 (29-78)||(17674209-17674258)
chr3 (162-198)||(22110116-22110152)
[»] scaffold0305 (1 HSPs)
scaffold0305 (14-258)||(20661-20906)
[»] chr1 (28 HSPs)
chr1 (14-257)||(50209832-50210075)
chr1 (14-253)||(22532532-22532772)
chr1 (14-257)||(34510039-34510283)
chr1 (14-257)||(22354190-22354434)
chr1 (14-257)||(20135446-20135690)
chr1 (14-258)||(27250358-27250592)
chr1 (14-257)||(20846848-20847081)
chr1 (15-254)||(433269-433509)
chr1 (14-257)||(21026939-21027172)
chr1 (14-258)||(38801020-38801254)
chr1 (14-258)||(22355803-22356037)
chr1 (14-258)||(22357489-22357723)
chr1 (14-198)||(20918921-20919104)
chr1 (27-256)||(52927612-52927843)
chr1 (15-103)||(21301157-21301245)
chr1 (14-174)||(20091092-20091253)
chr1 (27-225)||(33681301-33681499)
chr1 (29-137)||(22238009-22238117)
chr1 (27-203)||(21754350-21754525)
chr1 (37-224)||(20248570-20248757)
chr1 (14-121)||(21162124-21162231)
chr1 (28-106)||(22921499-22921577)
chr1 (162-253)||(26065202-26065295)
chr1 (14-81)||(22468315-22468382)
chr1 (28-89)||(43697788-43697849)
chr1 (59-101)||(52940464-52940506)
chr1 (28-81)||(21714983-21715036)
chr1 (14-78)||(8761252-8761316)
[»] scaffold0121 (1 HSPs)
scaffold0121 (17-257)||(8154-8394)
[»] scaffold0627 (1 HSPs)
scaffold0627 (14-257)||(163-407)
[»] scaffold0056 (2 HSPs)
scaffold0056 (14-257)||(16833-17077)
scaffold0056 (14-130)||(78980-79096)
[»] scaffold0175 (2 HSPs)
scaffold0175 (15-257)||(13351-13594)
scaffold0175 (14-198)||(34440-34623)
[»] scaffold0042 (1 HSPs)
scaffold0042 (15-258)||(23921-24164)
[»] scaffold0011 (2 HSPs)
scaffold0011 (14-257)||(52172-52415)
scaffold0011 (14-258)||(167608-167842)
[»] chr6 (41 HSPs)
chr6 (14-256)||(19303159-19303402)
chr6 (14-255)||(18409445-18409687)
chr6 (14-257)||(17287414-17287658)
chr6 (14-256)||(22779845-22780088)
chr6 (32-256)||(29060800-29061025)
chr6 (17-258)||(20637915-20638146)
chr6 (14-257)||(20594032-20594276)
chr6 (14-203)||(28496091-28496280)
chr6 (26-257)||(20360601-20360822)
chr6 (14-203)||(29808501-29808691)
chr6 (29-258)||(18821463-18821682)
chr6 (15-252)||(16920263-16920490)
chr6 (29-254)||(18456977-18457202)
chr6 (14-198)||(21939703-21939886)
chr6 (20-198)||(25611347-25611526)
chr6 (14-198)||(1561622-1561806)
chr6 (14-232)||(4667831-4668049)
chr6 (14-232)||(4189241-4189459)
chr6 (14-202)||(25603003-25603192)
chr6 (15-174)||(15894049-15894209)
chr6 (24-257)||(25628983-25629217)
chr6 (14-232)||(4674678-4674896)
chr6 (27-198)||(19652514-19652685)
chr6 (14-252)||(22831766-22831994)
chr6 (14-258)||(11185760-11185994)
chr6 (14-146)||(22334500-22334632)
chr6 (14-232)||(4185441-4185659)
chr6 (14-135)||(31155016-31155137)
chr6 (52-232)||(27332940-27333120)
chr6 (52-232)||(27393680-27393860)
chr6 (14-86)||(22439230-22439302)
chr6 (11-127)||(31164473-31164589)
chr6 (14-74)||(27415572-27415632)
chr6 (14-81)||(19863413-19863480)
chr6 (52-131)||(23019793-23019872)
chr6 (14-86)||(22432680-22432752)
chr6 (52-94)||(22080393-22080435)
chr6 (29-78)||(18180925-18180974)
chr6 (162-256)||(19668632-19668728)
chr6 (14-86)||(25641802-25641874)
chr6 (165-256)||(25644582-25644674)
[»] chr4 (42 HSPs)
chr4 (14-258)||(44053087-44053332)
chr4 (14-257)||(7798956-7799200)
chr4 (14-257)||(22636693-22636937)
chr4 (15-256)||(14038908-14039151)
chr4 (14-255)||(15091157-15091400)
chr4 (14-253)||(12903020-12903248)
chr4 (14-255)||(16377140-16377382)
chr4 (14-258)||(3096901-3097135)
chr4 (17-258)||(7089135-7089366)
chr4 (15-254)||(44928542-44928782)
chr4 (14-258)||(14052932-14053165)
chr4 (14-173)||(16239610-16239769)
chr4 (14-198)||(15552133-15552316)
chr4 (14-198)||(24029061-24029244)
chr4 (14-198)||(13812427-13812610)
chr4 (14-150)||(20156908-20157044)
chr4 (14-150)||(22633831-22633967)
chr4 (14-195)||(16596968-16597148)
chr4 (38-257)||(17047726-17047934)
chr4 (29-166)||(6190783-6190921)
chr4 (29-203)||(44102524-44102697)
chr4 (29-209)||(21814936-21815115)
chr4 (29-209)||(21815265-21815444)
chr4 (29-209)||(21818358-21818537)
chr4 (140-256)||(7893960-7894077)
chr4 (27-227)||(8846664-8846865)
chr4 (161-257)||(23374125-23374221)
chr4 (27-203)||(12774313-12774488)
chr4 (59-254)||(52242856-52243052)
chr4 (190-257)||(16239764-16239832)
chr4 (68-115)||(17046718-17046765)
chr4 (52-106)||(39705944-39705998)
chr4 (57-227)||(15099640-15099810)
chr4 (161-227)||(15464694-15464760)
chr4 (57-106)||(43198249-43198298)
chr4 (115-198)||(3332205-3332287)
chr4 (28-91)||(13844965-13845028)
chr4 (200-258)||(6190720-6190778)
chr4 (57-91)||(15190743-15190777)
chr4 (178-227)||(15190607-15190656)
chr4 (52-105)||(15868291-15868344)
chr4 (14-50)||(3332285-3332321)
[»] scaffold0292 (2 HSPs)
scaffold0292 (14-257)||(3729-3973)
scaffold0292 (26-257)||(601-833)
[»] scaffold0016 (2 HSPs)
scaffold0016 (15-258)||(2109-2353)
scaffold0016 (38-198)||(207161-207320)
[»] scaffold0021 (5 HSPs)
scaffold0021 (14-258)||(124843-125085)
scaffold0021 (27-145)||(62932-63051)
scaffold0021 (14-79)||(175202-175267)
scaffold0021 (162-204)||(136132-136174)
scaffold0021 (162-204)||(144840-144882)
[»] scaffold0647 (1 HSPs)
scaffold0647 (14-255)||(5739-5981)
[»] scaffold0639 (1 HSPs)
scaffold0639 (14-257)||(8734-8978)
[»] scaffold0145 (1 HSPs)
scaffold0145 (14-257)||(39019-39262)
[»] scaffold0080 (2 HSPs)
scaffold0080 (14-257)||(40171-40414)
scaffold0080 (162-232)||(19649-19719)
[»] scaffold0122 (2 HSPs)
scaffold0122 (15-256)||(25684-25926)
scaffold0122 (14-238)||(33112-33338)
[»] scaffold0003 (2 HSPs)
scaffold0003 (14-254)||(339569-339809)
scaffold0003 (14-74)||(71729-71789)
[»] scaffold0100 (1 HSPs)
scaffold0100 (14-204)||(20425-20615)
[»] scaffold0034 (2 HSPs)
scaffold0034 (29-258)||(51517-51747)
scaffold0034 (161-256)||(32795-32892)
[»] scaffold0026 (5 HSPs)
scaffold0026 (14-250)||(40122-40359)
scaffold0026 (14-134)||(39549-39669)
scaffold0026 (80-175)||(26567-26662)
scaffold0026 (72-198)||(59179-59304)
scaffold0026 (200-257)||(26154-26212)
[»] scaffold0193 (1 HSPs)
scaffold0193 (14-258)||(13469-13703)
[»] scaffold0231 (1 HSPs)
scaffold0231 (29-257)||(23141-23370)
[»] scaffold1842 (1 HSPs)
scaffold1842 (14-258)||(678-912)
[»] scaffold0456 (1 HSPs)
scaffold0456 (14-258)||(10055-10289)
[»] scaffold0217 (1 HSPs)
scaffold0217 (24-257)||(16227-16462)
[»] scaffold0598 (1 HSPs)
scaffold0598 (14-258)||(681-915)
[»] scaffold0228 (3 HSPs)
scaffold0228 (15-216)||(4808-5010)
scaffold0228 (15-216)||(12390-12592)
scaffold0228 (15-216)||(22342-22544)
[»] scaffold0839 (1 HSPs)
scaffold0839 (14-254)||(1696-1936)
[»] scaffold0395 (1 HSPs)
scaffold0395 (14-253)||(580-821)
[»] scaffold0120 (3 HSPs)
scaffold0120 (15-257)||(16346-16588)
scaffold0120 (14-238)||(32577-32802)
scaffold0120 (14-238)||(46203-46428)
[»] scaffold0413 (1 HSPs)
scaffold0413 (14-203)||(15233-15422)
[»] scaffold0352 (2 HSPs)
scaffold0352 (14-175)||(17626-17788)
scaffold0352 (200-257)||(17792-17849)
[»] scaffold0490 (1 HSPs)
scaffold0490 (14-258)||(2210-2444)
[»] scaffold0427 (1 HSPs)
scaffold0427 (14-258)||(13753-13987)
[»] scaffold0114 (2 HSPs)
scaffold0114 (14-258)||(15094-15328)
scaffold0114 (14-88)||(32894-32968)
[»] scaffold0403 (1 HSPs)
scaffold0403 (15-257)||(5108-5339)
[»] scaffold0070 (1 HSPs)
scaffold0070 (14-257)||(4782-5026)
[»] scaffold0358 (2 HSPs)
scaffold0358 (14-258)||(193-428)
scaffold0358 (14-258)||(4969-5204)
[»] scaffold0113 (1 HSPs)
scaffold0113 (17-258)||(32322-32553)
[»] scaffold0718 (1 HSPs)
scaffold0718 (14-258)||(4760-4994)
[»] scaffold0540 (1 HSPs)
scaffold0540 (14-217)||(631-834)
[»] scaffold0266 (1 HSPs)
scaffold0266 (14-149)||(18576-18712)
[»] scaffold0221 (1 HSPs)
scaffold0221 (14-198)||(12427-12610)
[»] scaffold0031 (2 HSPs)
scaffold0031 (14-198)||(20044-20227)
scaffold0031 (14-81)||(65412-65479)
[»] scaffold0309 (1 HSPs)
scaffold0309 (14-258)||(6868-7102)
[»] scaffold0032 (1 HSPs)
scaffold0032 (18-258)||(51837-52067)
[»] scaffold0235 (1 HSPs)
scaffold0235 (47-257)||(11175-11375)
[»] scaffold0161 (1 HSPs)
scaffold0161 (15-198)||(2064-2246)
[»] scaffold0075 (1 HSPs)
scaffold0075 (15-150)||(7913-8048)
[»] scaffold0876 (1 HSPs)
scaffold0876 (14-136)||(2703-2825)
[»] scaffold0347 (1 HSPs)
scaffold0347 (14-198)||(348-530)
[»] scaffold0037 (1 HSPs)
scaffold0037 (14-198)||(79950-80133)
[»] scaffold0351 (1 HSPs)
scaffold0351 (14-252)||(16543-16771)
[»] scaffold0218 (2 HSPs)
scaffold0218 (15-202)||(28899-29085)
scaffold0218 (162-256)||(7841-7937)
[»] scaffold0142 (2 HSPs)
scaffold0142 (29-203)||(17094-17268)
scaffold0142 (98-198)||(7473-7572)
[»] scaffold0475 (1 HSPs)
scaffold0475 (14-232)||(9361-9579)
[»] scaffold0124 (1 HSPs)
scaffold0124 (14-198)||(24268-24452)
[»] scaffold0389 (1 HSPs)
scaffold0389 (14-121)||(13226-13333)
[»] scaffold0192 (1 HSPs)
scaffold0192 (15-198)||(10230-10412)
[»] scaffold0088 (1 HSPs)
scaffold0088 (15-256)||(21171-21392)
[»] scaffold0064 (1 HSPs)
scaffold0064 (14-258)||(47244-47478)
[»] scaffold0503 (1 HSPs)
scaffold0503 (29-209)||(12237-12416)
[»] scaffold0484 (1 HSPs)
scaffold0484 (38-257)||(1173-1382)
[»] scaffold0261 (2 HSPs)
scaffold0261 (14-198)||(15978-16161)
scaffold0261 (9-86)||(1768-1845)
[»] scaffold0166 (1 HSPs)
scaffold0166 (14-198)||(9452-9635)
[»] scaffold0165 (2 HSPs)
scaffold0165 (38-257)||(3740-3949)
scaffold0165 (38-257)||(7804-8013)
[»] scaffold0084 (1 HSPs)
scaffold0084 (14-257)||(10422-10661)
[»] scaffold0151 (1 HSPs)
scaffold0151 (14-121)||(10540-10647)
[»] scaffold0130 (2 HSPs)
scaffold0130 (14-121)||(28932-29039)
scaffold0130 (124-226)||(28121-28223)
[»] scaffold0556 (1 HSPs)
scaffold0556 (27-227)||(7101-7301)
[»] scaffold0028 (1 HSPs)
scaffold0028 (27-203)||(132967-133143)
[»] scaffold0125 (1 HSPs)
scaffold0125 (27-227)||(45420-45621)
[»] scaffold0555 (3 HSPs)
scaffold0555 (14-202)||(893-1082)
scaffold0555 (161-256)||(10305-10402)
scaffold0555 (28-94)||(10200-10266)
[»] scaffold0150 (1 HSPs)
scaffold0150 (27-203)||(32397-32573)
[»] scaffold0023 (2 HSPs)
scaffold0023 (27-203)||(101709-101884)
scaffold0023 (27-89)||(39640-39702)
[»] scaffold0106 (3 HSPs)
scaffold0106 (14-258)||(1544-1778)
scaffold0106 (14-258)||(7521-7755)
scaffold0106 (14-81)||(16083-16150)
[»] scaffold0247 (2 HSPs)
scaffold0247 (17-121)||(6449-6553)
scaffold0247 (162-226)||(6561-6625)
[»] scaffold0211 (1 HSPs)
scaffold0211 (27-203)||(28440-28616)
[»] scaffold0141 (1 HSPs)
scaffold0141 (129-257)||(39735-39864)
[»] scaffold0049 (1 HSPs)
scaffold0049 (129-257)||(74948-75077)
[»] scaffold0001 (1 HSPs)
scaffold0001 (29-145)||(161056-161173)
[»] scaffold0423 (1 HSPs)
scaffold0423 (14-94)||(10890-10970)
[»] scaffold1984 (1 HSPs)
scaffold1984 (27-225)||(422-620)
[»] scaffold0810 (1 HSPs)
scaffold0810 (29-227)||(3222-3420)
[»] scaffold0628 (1 HSPs)
scaffold0628 (53-203)||(2460-2609)
[»] scaffold0102 (1 HSPs)
scaffold0102 (27-145)||(19637-19756)
[»] scaffold0138 (1 HSPs)
scaffold0138 (28-232)||(13225-13429)
[»] scaffold2044 (1 HSPs)
scaffold2044 (15-74)||(1075-1134)
[»] scaffold0078 (1 HSPs)
scaffold0078 (58-232)||(10813-10987)
[»] scaffold0207 (1 HSPs)
scaffold0207 (29-106)||(2277-2354)
[»] scaffold0621 (2 HSPs)
scaffold0621 (27-131)||(6923-7026)
scaffold0621 (52-101)||(8961-9010)
[»] scaffold0278 (1 HSPs)
scaffold0278 (27-106)||(6004-6083)
[»] scaffold1137 (1 HSPs)
scaffold1137 (29-203)||(1934-2108)
[»] scaffold0020 (1 HSPs)
scaffold0020 (28-227)||(15462-15661)
[»] scaffold0107 (1 HSPs)
scaffold0107 (15-74)||(15049-15108)
[»] scaffold0046 (1 HSPs)
scaffold0046 (14-80)||(14914-14980)
[»] scaffold0010 (2 HSPs)
scaffold0010 (27-89)||(130335-130397)
scaffold0010 (162-253)||(60479-60572)
[»] scaffold0737 (1 HSPs)
scaffold0737 (162-256)||(1562-1658)
[»] scaffold0507 (1 HSPs)
scaffold0507 (52-232)||(7713-7893)
[»] scaffold0530 (2 HSPs)
scaffold0530 (58-121)||(690-753)
scaffold0530 (161-227)||(798-864)
[»] scaffold0357 (2 HSPs)
scaffold0357 (164-257)||(15866-15961)
scaffold0357 (166-257)||(13389-13482)
[»] scaffold0346 (1 HSPs)
scaffold0346 (15-74)||(17343-17402)
[»] scaffold0116 (2 HSPs)
scaffold0116 (52-198)||(43440-43586)
scaffold0116 (52-91)||(47360-47399)
[»] scaffold0139 (1 HSPs)
scaffold0139 (14-79)||(20418-20483)
[»] scaffold1351 (1 HSPs)
scaffold1351 (162-202)||(322-362)
[»] scaffold0004 (1 HSPs)
scaffold0004 (14-86)||(70224-70296)
[»] scaffold0243 (1 HSPs)
scaffold0243 (161-227)||(5886-5952)
[»] scaffold0198 (1 HSPs)
scaffold0198 (28-81)||(26834-26887)
[»] scaffold0167 (1 HSPs)
scaffold0167 (28-81)||(36024-36077)
[»] scaffold0131 (1 HSPs)
scaffold0131 (28-81)||(36891-36944)
[»] scaffold0012 (1 HSPs)
scaffold0012 (161-257)||(225666-225763)
[»] scaffold0008 (1 HSPs)
scaffold0008 (29-78)||(30379-30428)
[»] scaffold0367 (1 HSPs)
scaffold0367 (37-89)||(1318-1370)
[»] scaffold0280 (1 HSPs)
scaffold0280 (34-78)||(18941-18985)
[»] scaffold0022 (1 HSPs)
scaffold0022 (162-198)||(128735-128771)


Alignment Details
Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 17 - 257
Target Start/End: Complemental strand, 23076940 - 23076701
Alignment:
Q  17 agagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatg 116  Q
    ||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23076940 agagcatgcaagatttcgtgattttgactattaagttgatccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatg 23076841  T
Q  117 agattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacag 216  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||    
T  23076840 agattggacctggaaagatttagaatgaaac-tttggaattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagttacccagaaacag 23076742  T
Q  217 aatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  23076741 agtgccttgttaggttttgcgacctttgttgcacgagttgt 23076701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 298433 - 298676
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||    
T  298433 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatatagg 298532  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||||||||||||||||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||| |||| |||||||||    
T  298533 atgagattgaacctggaaagatttagaatgaaacttgtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 298632  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    |||| || |||||||| |||||||||||||||||||||||||||    
T  298633 cagagtgacttgttagattttgcgacctttgttgcacgagttgt 298676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 14 - 255
Target Start/End: Complemental strand, 23660525 - 23660283
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||     
T  23660525 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 23660426  T
Q  114 atgagattagacctggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||| ||||||||||||||||||||| |||||||||||||||||||  |||| ||||||||||||||||||||| ||||||||    
T  23660425 atgagattgaacctggaaagattttagaatgaaacttttggaa-tctgacctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccagaa 23660327  T
Q  213 acagaatgccttgttagg-ttttgcgacctttgttgcacgagtt 255  Q
    ||||| |||||||||||| ||||| ||||||| |||||||||||    
T  23660326 acagagtgccttgttaggtttttgtgacctttattgcacgagtt 23660283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 27754078 - 27753833
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||| ||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||    
T  27754078 cagatagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctcaacatgtctaataatgattaggaaagaatgtagg 27753979  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||||| ||||||||||||| ||| |||||||||||||||||||||  |||| ||||||||||||||||  ||| ||||||||    
T  27753978 atgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaa 27753879  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    ||||| ||||||||||| |||||||||||| |||||||||||||||    
T  27753878 acagagtgccttgttagattttgcgaccttcgttgcacgagttgtc 27753833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 15 - 257
Target Start/End: Original strand, 22737799 - 22738042
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||| ||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||    
T  22737799 agagatcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagaatgtagga 22737898  T
Q  115 tgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    |||||||  |||| |||||||| ||||||||||||| ||| ||||||| |||||||||||||  |||| |||||||||||||||| |||| ||| |||||    
T  22737899 tgagattgaacctagaaagattgtagaatgaaacttgtgggattctgaactgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaa 22737998  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  22737999 cagagtgccttgttaggttttgcgacctttgttgcacgagttgt 22738042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 22337617 - 22337374
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||||| | ||| |||| ||||||||||||||||||||||||  ||||||||||||||||| | |||||||||||||||||    
T  22337617 agagagcatgcaagatttcgtgattctgacttttgagttgatccttagatgcttttgagtgtatgaacatgtctaataatgattaggaaagaatgtagga 22337518  T
Q  115 tgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaac 214  Q
    |||||||  |||||||||||||||||||||||||||| || |||||||||||| |||||||  ||||||||||||||||||||| |||| ||||||||||    
T  22337517 tgagattgaacctggaaagatttagaatgaaactttttgagttctgacctgaattcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaac 22337418  T
Q  215 agaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    |||  | ||||||||| ||||| |||||||||||||||||||||    
T  22337417 agagagtcttgttaggtttttgtgacctttgttgcacgagttgt 22337374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 15 - 253
Target Start/End: Original strand, 22730852 - 22731091
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||||||||| ||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  22730852 agagagcatgcaatatttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 22730951  T
Q  115 tgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    |||||||  ||||||||||||| ||||||||||||| ||| |||||||||||||||||||||   ||| | |||||||||||||  |||| |||||||||    
T  22730952 tgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggggagcaaaggctctcgcctcacgagtcacccagaaa 22731051  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgag 253  Q
    |||| |||||||||||||||||||| ||||||||||||||    
T  22731052 cagagtgccttgttaggttttgcgatctttgttgcacgag 22731091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 29 - 258
Target Start/End: Original strand, 32451562 - 32451792
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||||||||||||||  || ||    
T  32451562 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacatg 32451661  T
Q  129 gaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt 227  Q
    |||||||| ||||||||||||| ||| |||||||||||||||||||||  |||| |||||||||||||||| |||| ||||||||||||| || ||||||    
T  32451662 gaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt 32451761  T
Q  228 aggttttgcgacctttgttgcacgagttgtc 258  Q
    || ||||||||||||||||||||||||||||    
T  32451762 agattttgcgacctttgttgcacgagttgtc 32451792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 23286352 - 23286120
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||||||||||||||||| ||||| ||| |||| |||| ||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||    
T  23286352 agagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtagga 23286253  T
Q  115 tgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaac 214  Q
    |||||||  || ||          |||||||| || ||  ||| |||||||||||||||||  |||| |||||||||||||||| |||| ||| ||||||    
T  23286252 tgagattgaacatg----------gaatgaaaattgtgagattatgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaac 23286163  T
Q  215 agaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    ||| || |||||||| ||||||||||||||||||| |||||||    
T  23286162 agagtgacttgttagattttgcgacctttgttgcatgagttgt 23286120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 20309597 - 20309363
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| ||||| ||||||||||||||||| | |||||||||||| | ||||||||||||||||    
T  20309597 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttatatgcttttgagtgcctggatatgtctaataatgattaggaaagaatgtagg 20309498  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||          |||| |||||| ||| |||||||||||||||||||||   ||| |||||||||||||||| |||| |||||||||    
T  20309497 atgagattgaacctg----------gaattaaacttgtgggattctgacctgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccagaaa 20309408  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    || | || |||||||| |||||||||| ||||||||||| |||||    
T  20309407 caaagtgacttgttagattttgcgacccttgttgcacgatttgtc 20309363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 37745 - 37979
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||| ||||||||| |||||||  |||| ||| |||| | || |||||||||||||||||||||||||||||||||||||| | |||||||  |||||||    
T  37745 cagaaagcatgcaaaatttcgtatttttgacttttgagtggaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaagatgtagg 37844  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||          |||| |||||| ||  ||||| |||||||||||||||  |||| |||||||||||||||| |||  |||||||||    
T  37845 atgagattgaacctg----------gaattaaacttgtgagattctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacccagaaa 37934  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    || | || ||||||||  |||||||||||||||||||||||||||    
T  37935 catagtgacttgttagactttgcgacctttgttgcacgagttgtc 37979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 23654028 - 23654249
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||| | ||||| ||| |||| |||| |||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  23654028 cagagagcatgcaagatttcataattttgacttttgagttgaaccttagatgcttttgactgcctgaacatgtctaataatgattaggaaagaatgtagg 23654127  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  ||||||||          | ||||| |||| |||||||| ||||||||||||  |||| |             || |||| |||||||||    
T  23654128 atgagattgaacctggaa----------ttaaactgttgggattctgacttgaactcgccacggcgagca-------------cgcgagtgacccagaaa 23654204  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || |||||||| ||||||||||||||||||||||||||||    
T  23654205 cagagtgacttgttagattttgcgacctttgttgcacgagttgtc 23654249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 47 - 198
Target Start/End: Original strand, 23071614 - 23071764
Alignment:
Q  47 ttgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaagatttagaatgaaa 146  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||  ||||| ||||| |||||||||||    
T  23071614 ttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 23071713  T
Q  147 cttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
     ||| |  | ||||||| ||||||||||   |||| ||||||||||||||||    
T  23071714 atttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcg 23071764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 28291920 - 28292027
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| |||||||||||||||||||||||||||||||||| ||| | |||||||||||||||     
T  28291920 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaagaatgattaggaaagaatgtaga 28292019  T
Q  114 atgagatt 121  Q
    ||||||||    
T  28292020 atgagatt 28292027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 198
Target Start/End: Original strand, 22133848 - 22134017
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    |||||||||  |||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| || || ||||||||  |||    
T  22133848 agatttcgtacttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 22133947  T
Q  127 tggaaaga-tttagaatgaaacttttg-gaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    | | |||| |||||||||||  ||||| |||  |||| ||||||||||||   |||| ||||||||||||||||    
T  22133948 taggaagactttagaatgaa--ttttgtgaa--ctgaactgaactcgccatggcgagcagaggctctcgcctcg 22134017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 198
Target Start/End: Complemental strand, 28406436 - 28406298
Alignment:
Q  60 tagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaaga-tttagaatgaaacttttggaattc 158  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| || || ||||||||  ||||| ||||| |||||||| ||| |||  |||  |    
T  28406436 tagatgcttttgagtgcctgaacatgtctaataataattaggaaagattggagaatgagattgaacctgtaaagattttagaataaaattttgtgaa--c 28406339  T
Q  159 tg-acctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    || ||||||||||||||   |||||||||||||||||||||    
T  28406338 tgaacctgaactcgccatggcgagtagaggctctcgcctcg 28406298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 23708383 - 23708480
Alignment:
Q  161 acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    |||||||||||||| | ||||||||||||||||||| | |||||||||||  ||||||||| |  ||||| |||||||| |||||| |||||||||||    
T  23708383 acctgaactcgccatagcgagtagaggctctcgccttgcgagttacccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagttgt 23708480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 23207634 - 23207538
Alignment:
Q  162 cctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggtt--ttgcgacctttgttgcacgagttg 256  Q
    ||||||||||||| | ||||||||||||||||||| | ||||| |||||  ||||||  ||||||||||||   || ||||||||| ||||||||||    
T  23207634 cctgaactcgccatagcgagtagaggctctcgccttgcgagttgcccagttacagaacaccttgttaggttaaatgtgacctttgtcgcacgagttg 23207538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 25176331 - 25176254
Alignment:
Q  28 gatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaag 105  Q
    |||||||| ||||| ||  |||| |||| ||||||||| ||||||||||||||||||||||||| || | ||||||||    
T  25176331 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaag 25176254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 22412900 - 22412948
Alignment:
Q  162 cctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccag 210  Q
    ||||||||||||| | ||||||||||||||||||||||||||| |||||    
T  22412900 cctgaactcgccatagcgagtagaggctctcgcctcgtgagttgcccag 22412948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 23100849 - 23100916
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||||||||||||||||| ||||| ||| |||| |||| ||| ||||| |||| ||||||||||    
T  23100849 cagagagcatgcaagatttcgtaattttgacttttgagttgaacctcagatgtttttaagtgcctgaa 23100916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 20519957 - 20520050
Alignment:
Q  162 cctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt--aggttttgcgacctttgttgcacgag 253  Q
    |||||| |||||| | || |||||||||||||||||| ||||| || ||  ||||||| |||||||   |||||||||| ||||||||||||||    
T  20519957 cctgaagtcgccatagcgtgtagaggctctcgcctcgcgagttgcctagttacagaataccttgtttagggttttgcgatctttgttgcacgag 20520050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 23060815 - 23060771
Alignment:
Q  212 aacagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||    
T  23060815 aacagagtgccttgttaggttttgcgacctttgtt-cacgagttgt 23060771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 179; Significance: 1e-96; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 14 - 255
Target Start/End: Complemental strand, 23406884 - 23406642
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  23406884 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 23406785  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    |||||||| |||||||||||||| ||||||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||| |||| ||||||||    
T  23406784 atgagattggacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 23406685  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagtt 255  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  23406684 acagagtgccttgttaggttttgtgacctttgttgcacgagtt 23406642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 18878855 - 18879100
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  18878855 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 18878954  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||||| ||||||||||||| ||| ||||||||||||||||||||  ||||| |||||||||||||||| |||| ||||||||    
T  18878955 atgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccaagacgagcagaggctctcgcctcgcgagtgacccagaa 18879054  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  18879055 acagagtgccttgttagattttgcggcctttgttgcacgagttgtc 18879100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 20536711 - 20536466
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||| ||| | || |||| |||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  20536711 cagagagcatgcaagattttgtgattttgactttcgagttgaaccttagatgcttttgagtgcctgaacatgtctgataatgattaggaaagaatgtagg 20536612  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||||| ||||||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||| |||| ||||||||    
T  20536611 atgagattgaacctggaaagattgtagaatgaaacttatgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 20536512  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    ||||| || ||| |||||||||||||||||||||||||||||||||    
T  20536511 acagagtgacttattaggttttgcgacctttgttgcacgagttgtc 20536466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 18818028 - 18818271
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||    
T  18818028 cagagagcatgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagg 18818127  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||||| || ||||||||||||||  ||||||||||||||||||||  |||| |||||||||||||||| |||| ||||||||    
T  18818128 atgagattgaacctggaaagattgtaaaatgaaacttttgg-tttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 18818226  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    ||||| || ||||||||||||||||||||||||||||||||||||    
T  18818227 acagagtgtcttgttaggttttgcgacctttgttgcacgagttgt 18818271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 15 - 257
Target Start/End: Original strand, 28648663 - 28648906
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||    
T  28648663 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtagga 28648762  T
Q  115 tgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaac 214  Q
    |||||||  || ||||||||||||||||||||| ||| ||||| |||||||||||||||||  |||| |||||||||||||| | |  | ||||||||||    
T  28648763 tgagattgaacatggaaagatttagaatgaaaccttttgaattttgacctgaactcgccacggcgagcagaggctctcgccttgcgcatgacccagaaac 28648862  T
Q  215 agaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    ||| |||||||||||| |||||||||||||||||||||||||||    
T  28648863 agagtgccttgttaggattttgcgacctttgttgcacgagttgt 28648906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 23649055 - 23648812
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||||||||||||||| || |||| ||| |||| |||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||    
T  23649055 agagagcatgcaagatttcatgtttttgacttttgagttgatccttagatgcttttgagtgactgaacatgtctaataatgattaggaaagaatgtagga 23648956  T
Q  115 tgagattagacctggaaagatttagaatgaaac-ttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||| |||||| ||||| |||||||||||| |||||||||||||||| ||||||||||   |||  ||||||||||||||||||||| |||||||||    
T  23648955 tgagattggacctgaaaagacttagaatgaaacattttggaattctgacc-gaactcgccatggcgatcagaggctctcgcctcgtgagtaacccagaaa 23648857  T
Q  214 cagaatgccttgttaggttt-tgcgacctttgttgcacgagttgt 257  Q
    |||| || |||||||||||| ||||||||||||||||||||||||    
T  23648856 cagagtgacttgttaggtttatgcgacctttgttgcacgagttgt 23648812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 21923546 - 21923787
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||  |||||| |||||||| ||| |||| |||||||||||||||||||||||| |||||||||||||||||| | ||||| ||||||||||    
T  21923546 cagagagcatgtgagattttgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctaataatgattaggacagaatgtagg 21923645  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctga-cctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||| |||||||||||||||||||||| | ||||||| ||||||||||||||   ||| |||||||||||||||| |||| ||||||||    
T  21923646 atgagattgaacctgaaaagatttagaatgaaactttttggattctgaccctgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccagaa 21923745  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagt 254  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  21923746 acagagtgccttgttaggttttgcgacctttgttgcccgagt 21923787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 22627238 - 22626994
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22627238 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22627139  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  |||| |||||||| ||||||| ||| ||||||| ||||||| ||||| |||||  |||| |||||||||||||||| |||| | | ||||    
T  22627138 atgagattgaacctcgaaagattgtagaatg-aacctttggaaatctgacccgaacttgccacggcgagcagaggctctcgcctcgcgagtgatctagaa 22627040  T
Q  213 acagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    ||||| || ||||||||| |||||||||||||||||||||||||||    
T  22627039 acagagtgtcttgttaggtttttgcgacctttgttgcacgagttgt 22626994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 14 - 238
Target Start/End: Original strand, 16091959 - 16092184
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||     
T  16091959 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtaga 16092058  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||| ||||| ||||||||| ||  ||||||||||||||||||||||||||||||||  |||| |||||||||||||||  |||| |||||||||    
T  16092059 atgagattaaacctgaaaagatttaaaaaaaaacttttggaattctgacctgaactcgccacggcgagcagaggctctcgcctcccgagtgacccagaaa 16092158  T
Q  214 cagaatgccttgttagg-ttttgcga 238  Q
    |||| |||| ||||||| ||||||||    
T  16092159 cagagtgccctgttaggattttgcga 16092184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 15 - 230
Target Start/End: Complemental strand, 6759759 - 6759543
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||| |    
T  6759759 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagaa 6759660  T
Q  115 tgagattagacctggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    |||||||  || |||||| | ||||||||||||||||||||| |||||||||||||||||||  |||| |||||||||||||||| |||| |||||||||    
T  6759659 tgagattgaacttggaaatattttagaatgaaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 6759560  T
Q  214 cagaatgccttgttagg 230  Q
    |||| || |||||||||    
T  6759559 cagagtgtcttgttagg 6759543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 21918628 - 21918863
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||| ||||||||||||||||| ||||| ||| |||| |||| ||||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||    
T  21918628 cagacagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgctttggagtgcctgaacatgtctaataatgattagaaaagaatgtagg 21918727  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    | ||||||  |||||||         |||||||||| ||| ||||||||||||||||||||   |||| |||||||||||||||| |||| ||| |||||    
T  21918728 aagagattgaacctgga---------aatgaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctagaaa 21918818  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || |||||||| ||||||||||||||||||| ||||||||    
T  21918819 cagagtgacttgttagattttgcgacctttgttgcatgagttgtc 21918863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 41598687 - 41598446
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| |||| |||| ||||||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | || ||||||||||||     
T  41598687 cagagagcttgcaggattccgtgattttgacttttgagttgacccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtaga 41598588  T
Q  114 atgagattagacctggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||| |||||||||||||||| |||| ||||||||||||||||||   |||| |||||||||||||||| |||| ||| ||      
T  41598587 atgagattgaacctggaaagattttagaatgaaactttgggaa-tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctagtt 41598489  T
Q  213 acagaatgccttgttagg-ttttgcgacctttgttgcacgagt 254  Q
    ||||||||| |  ||||| |||||||| |||||  ||||||||    
T  41598488 acagaatgcttgtttaggattttgcgatctttgccgcacgagt 41598446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 230
Target Start/End: Complemental strand, 22875568 - 22875352
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| ||  |||| || ||||||||||||||||||| | || ||||||| ||||||| | ||||||||| |||||     
T  22875568 cagagagcttgcaagatttcgtgattttgacctttgagttaatccttagatgcttttgagcgtctaaacatgtttaataatgattaggaaagattgtaga 22875469  T
Q  114 atgagattagacctggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    | ||| ||  ||||||||||| |||||||||||||||| |||| ||||||||||||||||||  ||||| |||||||||||||||| |||| ||||||||    
T  22875468 acgaggttgaacctggaaagattttagaatgaaactttgggaa-tctgacctgaactcgccatgacgagcagaggctctcgcctcgcgagtgacccagaa 22875370  T
Q  213 acagaatgccttgttagg 230  Q
    ||||| || |||||||||    
T  22875369 acagagtgacttgttagg 22875352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 31971747 - 31971513
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||| |||| ||| |||| |||| ||||||||||||||| |||||||||||||||||||||| | |||||||| |||||||    
T  31971747 cagagagcatgcaagatttcgtgtttttgacttttgagttgaaccttagatgcttttgtgtgcctgaacatgtctaataatgattaggaaaggatgtagg 31971648  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||          |||| |||||| ||  ||||||||||||||||||| |  |||| ||||||| || ||||| |||  |||||||||    
T  31971647 atgagattgaacctg----------gaattaaacttgtgagattctgacctgaactcgccccggcgagcagaggctgtcacctcgcgagcgacccagaaa 31971558  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
     ||| || |||||||| ||||||||||||||||||||||||||||    
T  31971557 tagagtgacttgttagattttgcgacctttgttgcacgagttgtc 31971513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 29 - 175
Target Start/End: Complemental strand, 7373237 - 7373090
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||| ||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||  |||||    
T  7373237 atttcgtaattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctg 7373138  T
Q  129 gaaagatt-tagaatgaaacttttggaattctgacctgaactcgccac 175  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||||    
T  7373137 gaaagattgtagaatgaaacttgtgaaattctgacctgaactcgccac 7373090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 16199276 - 16199509
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| |||| ||||||||||||||||| ||||||||| ||||| | ||||||||||||||||    
T  16199276 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttggatgcttttgagtgccttaacatgtcttataatgattaggaaagaatgtagg 16199375  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||          |||||| |||| | ||| |||||||||||||||||||||| |||| ||| |||||||||||| |||| ||||| |||    
T  16199376 atgagattgaacc----------tagaattaaac-tgtgggattctgacctgaactcgccacagcgagcagacgctctcgcctcgcgagtgacccaaaaa 16199464  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || ||| || | ||||||||||||||||||||||||||||    
T  16199465 cagagtgacttattggattttgcgacctttgttgcacgagttgtc 16199509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 5865895 - 5866078
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||     
T  5865895 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 5865994  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||| ||||| ||||||||||| ||| |  | ||||||| ||||||||||   |||| ||||||||||||||||    
T  5865995 atgagattgaacctgaaaagacttagaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcg 5866078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 17141416 - 17141233
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||| ||  |||||||| |||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||     
T  17141416 cagagagcatgcaagattttgtattttttacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 17141317  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||| ||||| ||||||||||| ||| |  | || |||| ||||||||||   |||| ||||||||||||||||    
T  17141316 atgagattgaacctgaaaagacttagaatgaaaatttagagaatcagacc-gaactcgccatggcgagcagaggctctcgcctcg 17141233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 38 - 257
Target Start/End: Original strand, 25362793 - 25363002
Alignment:
Q  38 tttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaagattt 137  Q
    |||| ||| |||| |||| |||||||||| |||||||| ||||||||| |||||||| | ||||||||||||||||||||||||  ||||||||          
T  25362793 ttttgacttttgagttgaaccttagatgcctttgagtgactgaacatgactaataatgattaggaaagaatgtaggatgagattgaacctggaa------ 25362886  T
Q  138 agaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggttttgcg 237  Q
        |||||||| ||| ||||||||||||||||||||   |||| |||||||||||||||| |||| |||| |||||||| |||||||| ||  ||||||    
T  25362887 ----tgaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgagagtgacccggaaacagagtgccttgtgagactttgcg 25362982  T
Q  238 acctttgttgcacgagttgt 257  Q
    |||||| |||||||||||||    
T  25362983 acctttcttgcacgagttgt 25363002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 21249884 - 21249701
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||   |||| ||| |||| |||| |||||||||||||||||||||  ||||||||||||||| | ||||||||||||||||    
T  21249884 cagagagcatgcaagatttcgcatttttgacttttgagttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtagg 21249785  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    |||||| |  ||||||||||| || |||||||| ||| |  | ||||||| ||||||||||   |||| ||||||||||||||||    
T  21249784 atgagactgaacctggaaagacttggaatgaaaatttggagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcg 21249701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 21255722 - 21255539
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||   |||| ||| |||| |||| |||||||||||||||||||||  ||||||||||||||| | ||||||||||||||||    
T  21255722 cagagagcatgcaagatttcgcatttttgacttttgagttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtagg 21255623  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||||||||| || |||||||| ||| |  | ||||||| ||||||||||   |||| || |||||||||||||    
T  21255622 atgagattgaacctggaaagacttggaatgaaaatttggagaatctgacc-gaactcgccatggcgagcagcggctctcgcctcg 21255539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 21491495 - 21491363
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||||| ||| || | |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||     
T  21491495 cagagagcatgcaagattttgtaattttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 21491396  T
Q  114 atgagattagacctggaaagatttagaatgaaa 146  Q
    ||||||||  |||| |||||| |||||||||||    
T  21491395 atgagattgaacctagaaagacttagaatgaaa 21491363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 45130649 - 45130766
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||| |||||||||||||||  |||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  45130649 cagagaccatgcaagatttcgtatttttgacttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 45130748  T
Q  114 atgagattagacctggaa 131  Q
    ||||||||  ||||||||    
T  45130749 atgagattgaacctggaa 45130766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 19801045 - 19801137
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaaga 106  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||| | ||||||||||||||||||||||||| | |||||||||    
T  19801045 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcatatgagtgcctgaacatgtctaataatgattaggaaaga 19801137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 227
Target Start/End: Original strand, 26355329 - 26355529
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| |||||||||| ||| |||||||||||||||||||||||||||| | ||||| ||| || ||  |||||||  |||    
T  26355329 agatttcgtaattttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggagagattgaagattgagattgaacc 26355428  T
Q  127 tggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttg 225  Q
    |||||||| |||||||||||  |||  ||||| | ||||||||| ||||   ||||||||||||||||||||  ||| || | ||  |||||||||||||    
T  26355429 tggaaagactttagaatgaatttttgtgaattgt-acctgaacttgccatggcgagtagaggctctcgcctcacgagctaactagttacagaatgccttg 26355527  T
Q  226 tt 227  Q
    ||    
T  26355528 tt 26355529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 198
Target Start/End: Complemental strand, 21674195 - 21674024
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| ||||||||| || | |||||||||||||||||||||||||||| | ||||||||| || || ||||||||  |||    
T  21674195 agatttcgtaattttgacttttgagttgatccttggacgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 21674096  T
Q  127 tggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    |||||||| |||||||||||  |||  || ||   ||||||||||||||   ||||||||||| |||||||||    
T  21674095 tggaaagattttagaatgaatatttgtgagtt-gcacctgaactcgccatggcgagtagaggccctcgcctcg 21674024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 200 - 257
Target Start/End: Complemental strand, 7373086 - 7373029
Alignment:
Q  200 gagttacccagaaacagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    |||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  7373086 gagtgacccagaaacagagtgtcttgttaggttttgcgacctttgttgcacgagttgt 7373029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 45130793 - 45130861
Alignment:
Q  190 ctcgcctcgtgagttacccagaaacagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    ||||||||| |||| ||||||||||||| || ||| |||| ||||||||||||||||||||||||||||    
T  45130793 ctcgcctcgcgagtgacccagaaacagagtgacttattagattttgcgacctttgttgcacgagttgtc 45130861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 21389071 - 21389138
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaa 81  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| |||||||||||||||||||||||||    
T  21389071 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaa 21389138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 225
Target Start/End: Original strand, 38854907 - 38855079
Alignment:
Q  52 ttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaa-agatttagaatgaaacttt 150  Q
    |||| ||||||||| |||||||||||||||||||||||||||| | ||||||||| || ||  | |||||  |||||||| || || |||| |||  |||    
T  38854907 ttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagatttaacctggaatagtttaagaacgaa--ttt 38855004  T
Q  151 tggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttg 225  Q
    ||  | |   ||||||||||||||   ||||||||||| ||||||||| || || |||||  |||||||||||||    
T  38855005 tgagagttacacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgcccagttacagaatgccttg 38855079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 227
Target Start/End: Complemental strand, 39834292 - 39834122
Alignment:
Q  57 ccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaa-agatttagaatgaaacttttggaa 155  Q
    ||||||||| |||||||||||| ||| ||| | ||||| | ||||||||| |||||  |||||||  |||||||| || || |||||||| ||||  ||     
T  39834292 ccttagatgtttttgagtgcctaaacttgtatgataatgattaggaaagattgtagattgagattgaacctggaatagtttaagaatgaatctttgtgag 39834193  T
Q  156 ttctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt 227  Q
    ||   ||||||||||||||   ||||||||||||||||||||| ||| ||||||   ||||||| |||||||    
T  39834192 ttgc-acctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaataccttgtt 39834122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 6520833 - 6520779
Alignment:
Q  52 ttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaaga 106  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  6520833 ttgaaccttagatgtttttgagtgtctgaacatgtctaataataattaggaaaga 6520779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 21395626 - 21395668
Alignment:
Q  39 ttttactattgatttgatccttagatgcttttgagtgcctgaa 81  Q
    ||||||| |||| |||| |||||||||||||||||||||||||    
T  21395626 ttttacttttgagttgaaccttagatgcttttgagtgcctgaa 21395668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 21790119 - 21790161
Alignment:
Q  39 ttttactattgatttgatccttagatgcttttgagtgcctgaa 81  Q
    ||||||| |||| |||| |||||||||||||||||||||||||    
T  21790119 ttttacttttgagttgaaccttagatgcttttgagtgcctgaa 21790161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 16409889 - 16409938
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcct 78  Q
    ||||||| ||||| ||| |||| |||| ||||||||||||||||||||||    
T  16409889 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 16409938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 16860971 - 16861020
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcct 78  Q
    ||||||| ||||| ||| |||| |||| ||||||||||||||||||||||    
T  16860971 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 16861020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 20856059 - 20856108
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcct 78  Q
    ||||||||||||| | | |||| |||| ||||||||||||||||||||||    
T  20856059 atttcgtgattttgaattttgagttgaaccttagatgcttttgagtgcct 20856108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 37116704 - 37116668
Alignment:
Q  162 cctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||||||| | |||||||||||||||||||||    
T  37116704 cctgaactcgccatagcgagtagaggctctcgcctcg 37116668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 169; Significance: 1e-90; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 21985765 - 21986009
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||     
T  21985765 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 21985864  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||  | || |||||| ||||||||| |||| |||||||||    
T  21985865 atgagattgaacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacggcaagcagaggccctcgcctcgcgagtgacccagaaa 21985964  T
Q  214 cagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    |||| || ||||||||| |||||||||||||||||||||||||||    
T  21985965 cagagtgtcttgttaggtttttgcgacctttgttgcacgagttgt 21986009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 15 - 254
Target Start/End: Complemental strand, 13095996 - 13095756
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||  |||||||||||||||||||| | |||||||||||||||||    
T  13095996 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgaaagcctgaacatgtctaataatgattaggaaagaatgtagga 13095897  T
Q  115 tgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaac 214  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||| |||||| ||||||||| |||| ||| ||||||    
T  13095896 tgagattggacctggaaagatttagaatgaaacttgtgggattctgacctgaactcgccacagcgagcagaggccctcgcctcgcgagtgacctagaaac 13095797  T
Q  215 agaatgccttgttagg-ttttgcgacctttgttgcacgagt 254  Q
    ||| || ||||||||| ||||||||||||||||||||||||    
T  13095796 agagtgacttgttaggtttttgcgacctttgttgcacgagt 13095756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 25422035 - 25421791
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||| |||| | ||||||||||  ||||    
T  25422035 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctattaatgattaggaaagaacttagg 25421936  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    |||||||| |||||||||||||||||||||||||||| |||| |||||| ||||||||||||  ||||||||||||||||||||| |||| ||| |||||    
T  25421935 atgagattggacctggaaagatttagaatgaaactttcggaaatctgacttgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaaa 25421836  T
Q  214 cagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    | || |||||||||||| |||||||||||||||||||||||||||    
T  25421835 ccgagtgccttgttaggattttgcgacctttgttgcacgagttgt 25421791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 24494071 - 24493827
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||||| ||||||||||  |||||||||||||||||||| | ||||||||||||||||    
T  24494071 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttaaatgcttttgaacgcctgaacatgtctaataatgattaggaaagaatgtagg 24493972  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||||||||||||||||||||||||| | |||||||||||||||||||||  |||| ||||||| ||||||||||||| ||||| |||    
T  24493971 atgagattgaacctggaaagatttagaatgaaactttttggattctgacctgaactcgccacggcgagcagaggctttcgcctcgtgagtaacccataaa 24493872  T
Q  214 cagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    |||| || ||||||||| |||||||||||||||||||||||||||    
T  24493871 cagagtgtcttgttaggtttttgcgacctttgttgcacgagttgt 24493827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 25431897 - 25431653
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| || |||| | ||||||||||| ||||    
T  25431897 cagagagcgtgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagaatttagg 25431798  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||||||||||| ||||| |||| |||||||||    
T  25431797 atgagattggacctggaaagatttagaatgaaacttttggaaatctgacttgaactcgccacggcgagtagaggctctcacctcgcgagtgacccagaaa 25431698  T
Q  214 cagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
      || |||||||||||| |||||||||||||||| ||||||||||    
T  25431697 tcgagtgccttgttaggattttgcgacctttgttacacgagttgt 25431653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 24529724 - 24529486
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||    
T  24529724 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttcagtgcctgaacatgtctaataatgattaggaaagaatgtagg 24529625  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  |||||||||| || ||||||||||||||||||||||||| |||||||||||||  |||| |||||||||||||||| |||| ||||||||    
T  24529624 atgagattgaacctggaaaggttgtagaatgaaacttttggaattctgatctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 24529525  T
Q  213 acagaatgccttgttagg-ttttgcgacctttgttgcac 250  Q
    |||||  | ||||||||| ||||||||||||||||||||    
T  24529524 acagagagtcttgttaggtttttgcgacctttgttgcac 24529486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 23390115 - 23390359
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  23390115 agagagcatccaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 23390214  T
Q  115 tgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    |||||||  ||||||||||||| ||||||||||||| ||| ||||||||||||||||||||   |||||||||||| |||||||  |||| ||||  |||    
T  23390215 tgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccctaaaa 23390314  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||||    
T  23390315 cagagtgccttgttagattttgtgacctttgttgcacgagttgtc 23390359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 13025812 - 13025569
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||| | | |||| ||||||||||||| |||||||  |||||||||||||||||||| | |||||||||||||||||    
T  13025812 agagagcatgcaagatttcgtgattttgaattttgagttgatccttagatacttttgaaagcctgaacatgtctaataatgattaggaaagaatgtagga 13025713  T
Q  115 tgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaac 214  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||| | |||| ||||||||| |||| ||| ||||||    
T  13025712 tgagattggacctggaaagatttagaatgaaacttgtgggattctgacctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacctagaaac 13025613  T
Q  215 agaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    ||| || ||||||||| |||||||||||||||||||||| ||||    
T  13025612 agagtgacttgttaggtttttgcgacctttgttgcacgatttgt 13025569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 9078455 - 9078211
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||||| ||| |||||||||||||||||||||||||||||||| | ||||||| |||||||     
T  9078455 cagagagcatgcaagatttcgtgattttgacttttgagttgatctttatatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaga 9078356  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||||||||||||||||||||| ||| |||||||||||||||||||||||  |||| |||||||||||||||| |||| |||||||||    
T  9078355 atgagattgaacctggaaagatttagaatgaaaccttttgaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 9078256  T
Q  214 cagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    |||| |||||||||||| |||||||| || ||| |||| ||||||    
T  9078255 cagagtgccttgttaggattttgcgatctgtgtcgcacaagttgt 9078211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 1096970 - 1096726
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  1096970 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 1096871  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  | |||||||||||  |||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||| |||| ||||||||    
T  1096870 atgagattgaatctggaaagattgcagaatg-aacttttggaaatctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 1096772  T
Q  213 acagaatgccttgttag-gttttgcgacctttgttgcacgagttgt 257  Q
    |||||||||||| ||||  |||||||| || ||| |||| ||||||    
T  1096771 acagaatgcctttttagaattttgcgatctctgtcgcacaagttgt 1096726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 21292611 - 21292833
Alignment:
Q  26 aagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagac 125  Q
    ||||||||||  |||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||    
T  21292611 aagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattgaac 21292710  T
Q  126 ctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttg 225  Q
    ||||||          | |||||| |||||||||||||||||||||||||  |||| |||||||||||||||| |||| ||||||||| ||| || |||     
T  21292711 ctggaa----------ttaaacttgtggaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaatagagtgacttt 21292800  T
Q  226 ttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| ||||||||||||||||||||||||||||    
T  21292801 ttagattttgcgacctttgttgcacgagttgtc 21292833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 22075511 - 22075278
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | |||| |||||||||||    
T  22075511 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtagg 22075412  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccag-aa 212  Q
    |||| | |  |||||          ||||||||||| ||   ||||||||||||||||||||  |||| |||||||||||||||| |||| |||||| ||    
T  22075411 atgaaaatgaacctg----------gaatgaaacttgtgaggttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 22075322  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    ||||| || ||||||| ||||||||||||||||||||||||||||    
T  22075321 acagagtgacttgtta-gttttgcgacctttgttgcacgagttgt 22075278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 8286471 - 8286704
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||| |||| ||| |||| |||| |||||||||| |||||||||| |||||||||||||||| | || |||||||||||||    
T  8286471 cagagagcatgcaagatttcgtgtttttgacttttgagttgaaccttagatgcatttgagtgccggaacatgtctaataatgattaagaaagaatgtagg 8286570  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||          ||||||||||| ||| |||||||||| |||| ||||   |||| |||||||||||||||| |||| |||||||||    
T  8286571 atgagattgaacctg----------gaatgaaacttgtgggattctgacctaaactagccatggcgagcagaggctctcgcctcgcgagtgacccagaaa 8286660  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    |||| || |||||||| ||||||||||||||||||  |||||||    
T  8286661 cagagtgacttgttagattttgcgacctttgttgcttgagttgt 8286704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 232
Target Start/End: Original strand, 21871190 - 21871407
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||||||||||| || |||| | ||||||||| |||||||    
T  21871190 agagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtagga 21871289  T
Q  115 tgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    |||||||  ||||||||||||| | |||||  |||||||  ||||||||||| ||||||||   ||||||||||||| || |||| ||| || ||| | |    
T  21871290 tgagattgaacctggaaagattatggaatg-gacttttgtgattctgacctgtactcgccatggcgagtagaggctcccggctcgcgagctaaccaaata 21871388  T
Q  214 cagaatgccttgttaggtt 232  Q
    |||||||||||| ||||||    
T  21871389 cagaatgccttgctaggtt 21871407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 232
Target Start/End: Original strand, 21875470 - 21875687
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||||||||||| || |||| | ||||||||| |||||||    
T  21875470 agagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtagga 21875569  T
Q  115 tgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    |||||||  ||||||||||||| | |||||  |||||||  ||||||||||| ||||||||   ||||||||||||| || |||| ||| || ||| | |    
T  21875570 tgagattgaacctggaaagattatggaatg-gacttttgtgattctgacctgtactcgccatggcgagtagaggctcccggctcgcgagctaaccaaata 21875668  T
Q  214 cagaatgccttgttaggtt 232  Q
    |||||||||||| ||||||    
T  21875669 cagaatgccttgctaggtt 21875687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 22119811 - 22119994
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||| |||| |||||||| ||| |||| |||| |||||||||| ||||||||||||||||||||||||| | | ||||||||||||||||    
T  22119811 cagagagcatgcaaaattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 22119910  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||||||||| ||||||||||||||| |  | ||||| ||||||||||||   |||| ||||||||||||||||    
T  22119911 atgagattgaacctggaaagacttagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcg 22119994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 254
Target Start/End: Original strand, 11580878 - 11581104
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||||||||| ||| |||| |||||||||||| |||||||||||||||||||||| ||||||| | ||||||||||||||| ||||||||  |||||    
T  11580878 atttcgtgattttgacttttgagttgatccttagaagcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 11580977  T
Q  129 gaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt 227  Q
    || ||| |||||||| |||||||  ||| ||||||||||||||||||   |||| |||||||||||||||| |||| |||||   ||||||||| |  ||    
T  11580978 gatagattttagaataaaactttgagaa-tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccatttacagaatgcttgttt 11581076  T
Q  228 agg-ttttgcgacctttgttgcacgagt 254  Q
    ||| |||||||| |||||| | ||||||    
T  11581077 aggattttgcgatctttgtcgtacgagt 11581104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 19660455 - 19660639
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||| ||  |||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||| |     
T  19660455 cagagagcatgcaagattttgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtgga 19660554  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttgga-attctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||| ||||||||||| |||||||||||  |||||| | ||| ||| ||||||||||   |||| ||||||||||||||||    
T  19660555 atgagattaaacctggaaagacttagaatgaaaactttggagaatctaacc-gaactcgccatggcgagcagaggctctcgcctcg 19660639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 254
Target Start/End: Original strand, 36154461 - 36154687
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||| ||||||| ||| || | ||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||  |||||||  |||||    
T  36154461 atttcatgattttgacttttaagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagagtgagattgaacctg 36154560  T
Q  129 gaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt 227  Q
    || ||| |||||||| |||||||  ||| ||||||||||||||||||   ||||||||||||||||||||| |||| ||| |   ||||||||| |  ||    
T  36154561 gatagattttagaataaaactttgagaa-tctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctatttacagaatgcttgttt 36154659  T
Q  228 agg-ttttgcgacctttgttgcacgagt 254  Q
    ||| |||||||| |||||| ||||||||    
T  36154660 aggattttgcgatctttgtcgcacgagt 36154687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 22107002 - 22107235
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||| |||||||  |||| ||| |||| |||| | |||||||| ||||||||||||||||||||||||| | | ||||||||||||||||    
T  22107002 cagagagcatgcaaaatttcgtatttttgacttttgagttgaactttagatgcgtttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 22107101  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    | ||||||  |||||           ||| |||||| ||| |||||||||||||||| |||   |||| |||||||||||||||| |||| |||| ||||    
T  22107102 acgagattgaacctg----------aaattaaacttgtgggattctgacctgaactcaccatggcgagcagaggctctcgcctcgcgagtgacccggaaa 22107191  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
     ||| |||||||| |   ||||||||||||||||||||||||||    
T  22107192 tagagtgccttgtgatactttgcgacctttgttgcacgagttgt 22107235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 24766955 - 24767138
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||| ||||||||||||||| ||||||  ||| |||| |||| |||||||||| ||||||||||||||||||||||||| | | || |||||||||||||    
T  24766955 cagatagcatgcaagatttcatgatttcgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtagg 24767054  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  | ||||||||| ||||||||||||||| |  | ||||| ||||||||| ||   |||| ||||||||||||||||    
T  24767055 atgagattgaatctggaaagacttagaatgaaactttggagaatctga-ctgaactcgtcatggcgagcagaggctctcgcctcg 24767138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 227
Target Start/End: Complemental strand, 21566034 - 21565834
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| |||||||||||||| |||||||||||||||||||||||||||| | ||||||||| || || ||||||||  |||    
T  21566034 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 21565935  T
Q  127 tggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttg 225  Q
    |||||||| |||||||||||  ||   ||||| | ||||||||||||||   |||| |||||||||||||||||||| || | ||  |||||||| ||||    
T  21565934 tggaaagattttagaatgaattttcgtgaattgt-acctgaactcgccatggcgagcagaggctctcgcctcgtgagctaactagttacagaatgacttg 21565836  T
Q  226 tt 227  Q
    ||    
T  21565835 tt 21565834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 227
Target Start/End: Original strand, 22959166 - 22959364
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||| ||||| ||| |||| |||||||||||||| |||||||||||||||||||||||||||| | ||||||||| || || ||||||||  |||||    
T  22959166 atttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctg 22959265  T
Q  129 gaaaga-tttagaatgaaacttttggaattctg-acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgt 226  Q
    || ||| |||||||||||  |||  |||  ||| ||||||||||||||   ||||||||||||||||||||| ||| || | ||  ||||||||||||||    
T  22959266 gagagactttagaatgaatttttgtgaa--ctgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgccttgt 22959363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 197
Target Start/End: Complemental strand, 19669390 - 19669219
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| |||||||||||||| ||||||||| |||||||||||||||||| | ||||||||| ||  | ||||||||  ||     
T  19669390 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgtctgaacatgtctaataatgattaggaaagattggggaatgagattgaacg 19669291  T
Q  127 tggaaaga-tttagaatgaaacttttg-gaattctgacctgaactcgccacaacgagtagaggctctcgcctc 197  Q
    |||||||| |||||||||||  ||||| ||||| | ||||||||||||||   || |||||||||||||||||    
T  19669290 tggaaagactttagaatgaattttttgtgaattgt-acctgaactcgccatggcgtgtagaggctctcgcctc 19669219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 257
Target Start/End: Complemental strand, 22144508 - 22144309
Alignment:
Q  59 ttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaagattta-gaatgaaacttttggaatt 157  Q
    ||||||| |||||||||||||||||||| ||| ||| | ||||||||| | |||  |||||||  ||||||||  ||||| ||||| |  ||| ||| ||    
T  22144508 ttagatgattttgagtgcctgaacatgtgtaacaatgattaggaaagattctagattgagattgaacctggaataatttaagaatggatttttgggagtt 22144409  T
Q  158 ctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttagg-ttttgcgacctttgttgcacgagttg 256  Q
       |||||||||||||| | ||||||||||||||||||||| ||||| |||||  ||||||||| |  ||||| |||||||| |||||| ||||||||||    
T  22144408 ac-acctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagttg 22144310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 256
Target Start/End: Original strand, 21329151 - 21329358
Alignment:
Q  52 ttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaagatttag-aatgaaacttt 150  Q
    |||| ||||||||| ||||||||||||||||||||||| | || | ||| ||||| | |||  |||||||  ||||||||  |||||| ||||||  |||    
T  21329151 ttgaaccttagatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaataatttaggaatgaattttt 21329250  T
Q  151 tggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttg-ttaggtt--ttgcgacctttgttg 247  Q
     ||| ||   || ||||||||||| | ||||||||||||||||||||| || ||||| ||  ||||||||||||| |||||||   ||||| |||||| |    
T  21329251 gggagttgc-acttgaactcgccatagcgagtagaggctctcgcctcgcgaattacctagttacagaatgccttgtttaggttaaatgcgatctttgtcg 21329349  T
Q  248 cacgagttg 256  Q
    |||||||||    
T  21329350 cacgagttg 21329358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 21501919 - 21501989
Alignment:
Q  161 acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggtt 232  Q
    |||||||||||||| | ||||||||||||||||||||| |||||||||||   |||||||||||||| ||||    
T  21501919 acctgaactcgccatagcgagtagaggctctcgcctcgcgagttacccag-ttcagaatgccttgttgggtt 21501989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 227
Target Start/End: Original strand, 5888837 - 5889006
Alignment:
Q  58 cttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaa-agatttagaatgaaacttttggaat 156  Q
    |||||||| |||||||||||||||| ||| | || || | ||||||||| |||||  |||||||  || ||||| || || |||||||| ||||  || |    
T  5888837 cttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacatggaatagtttaagaatgaatctttgtgagt 5888936  T
Q  157 tctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt 227  Q
    |   ||||||||||||||   ||||||||||||||||||||| ||| ||||||   |||||||||||||||    
T  5888937 tgc-acctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgtt 5889006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 20910430 - 20910490
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||||||||||||| ||| |||| |||| |||||||||  |||||||    
T  20910430 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtctttgagt 20910490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 20026706 - 20026746
Alignment:
Q  163 ctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  20026706 ctgaactcgccacagcgagtagaggctctcgcctcgcgagt 20026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 131
Target Start/End: Original strand, 21498673 - 21498752
Alignment:
Q  52 ttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaa 131  Q
    |||| |||| |||| |||||||||||||||||||| ||||||| | ||||| ||| |||||  |||||||  ||||||||    
T  21498673 ttgaaccttggatgtttttgagtgcctgaacatgtataataattattaggagagattgtagattgagattgaacctggaa 21498752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 21741308 - 21741374
Alignment:
Q  161 acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt 227  Q
    ||||||||||||||   ||||||||||||||||||||||||| || ||||  ||| |||| ||||||    
T  21741308 acctgaactcgccatggcgagtagaggctctcgcctcgtgagctaaccagttacataatgtcttgtt 21741374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 37724403 - 37724337
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||||| ||||||  || ||||| ||| |||| |||| ||||||||| |||||||||||||||    
T  37724403 agagagcatgtaagattctgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 37724337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 20026521 - 20026561
Alignment:
Q  54 gatccttagatgcttttgagtgcctgaacatgtctaataat 94  Q
    |||| ||||||| |||||||||||||||||||| |||||||    
T  20026521 gatctttagatgattttgagtgcctgaacatgtataataat 20026561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 168; Significance: 4e-90; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 38227982 - 38227739
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |    
T  38227982 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaa 38227883  T
Q  115 tgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaac 214  Q
    |||||||  |||||||||||||||||||||||||||| | |||||||||||||||||||||  |||| |||||||||||||||| |||| ||||| ||||    
T  38227882 tgagattgaacctggaaagatttagaatgaaactttttggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccataaac 38227783  T
Q  215 agaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    ||| |||||||||||| |||||||||||||||||||||||||||    
T  38227782 agagtgccttgttaggtttttgcgacctttgttgcacgagttgt 38227739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 9509692 - 9509447
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  9509692 cagagagcatgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 9509593  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||||| ||||||||||||| ||| |||||||||||||||||||||  |||| |||||||||||||||| |||| ||||||||    
T  9509592 atgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgaggagaggctctcgcctcgcgagtgacccagaa 9509493  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  9509492 acagagtgccttgttagattttgcgacctttgttgcaagagttgtc 9509447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 12699335 - 12699090
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  12699335 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 12699236  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    |||| |||  ||||||||||||| | ||||||||||  ||| |||||||||||||||||||||  |||| |||||||||| |||||||||| ||||||||    
T  12699235 atgaaattgaacctggaaagattgttgaatgaaactcgtgggattctgacctgaactcgccacggcgagcagaggctctcacctcgtgagtgacccagaa 12699136  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    ||| | || |||||||||||||||||||||||||||||||||||||    
T  12699135 acaaagtgacttgttaggttttgcgacctttgttgcacgagttgtc 12699090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 3563982 - 3564226
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||| ||||| ||| |||| ||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  3563982 cagagagcttgcaagatttcgttattttgacttttgagttgattcttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 3564081  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||||| ||||||| ||||||||||| |||||||||||||||||||| |||| | | |||||||||||| |||| ||||||||    
T  3564082 atgagattgaacctggaaagattgtagaatg-aacttttggaaatctgacctgaactcgccacagcgagcaaatgctctcgcctcgcgagtgacccagaa 3564180  T
Q  213 acagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  3564181 acagagtgccttgttaggattttgcgacctttgttgcacgagttgt 3564226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 16385876 - 16386110
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  16385876 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 16385975  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||          |||| |||||| ||| ||||| |||||||||||||||  |||| || ||||||||||||| |||| |||||||||    
T  16385976 atgagattgaacctg----------gaattaaacttgtgggattctaacctgaactcgccacggcgagcagtggctctcgcctcgcgagtgacccagaaa 16386065  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || |||||||| ||||||||||||||||||| ||||||||    
T  16386066 cagagtgacttgttagattttgcgacctttgttgcatgagttgtc 16386110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 14 - 256
Target Start/End: Original strand, 15143654 - 15143898
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactatt-gatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtag 112  Q
    |||||| | ||| ||||||||||||||| ||| || || |||  |||||||||| ||||||||||||||||||||||||||| | ||||||||| | |||    
T  15143654 cagagaacttgcgagatttcgtgattttgactttttgagttgtaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagattttag 15143753  T
Q  113 gatgagattagacctggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccaga 211  Q
     ||||||||  ||||||||||| ||||||||| ||||||||  ||||||||||| ||||||||   |||| |||||||||||||||| |||| ||| |||    
T  15143754 aatgagattgaacctggaaagattttagaatg-aacttttgtgattctgacctgtactcgccatggcgagcagaggctctcgcctcgcgagtgacctaga 15143852  T
Q  212 aacagaatgccttgttagg-ttttgcgacctttgttgcacgagttg 256  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||    
T  15143853 aacagagtgccttgttaggattttgcgacctttgttgcacgagttg 15143898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 27847462 - 27847696
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| ||||||||||||||||||||||||||||||||||| || | ||||||||||| ||||    
T  27847462 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatttagg 27847561  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||          |||| |||||| ||| ||| |||||||||||||||||  | || |||||||||||||||| |||| ||||| |||    
T  27847562 atgagattgaacctg----------gaattaaacttatgggattttgacctgaactcgccacggcaagcagaggctctcgcctcgcgagtgacccaaaaa 27847651  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || |||||||| ||||||||||||||||||||||||||||    
T  27847652 cagagtgacttgttagattttgcgacctttgttgcacgagttgtc 27847696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 40443880 - 40443647
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||| |||||||||||||||||  |||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||    
T  40443880 cagaaagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagg 40443781  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||||   |||        ||||| ||| |||||||||||||||||||||  |||| |||||||||||||||| |||| |||||||||    
T  40443780 atgagattgaacctgga---att--------aacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 40443692  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || ||| || | ||||||||||||||||||||||||||||    
T  40443691 cagagtgacttattggattttgcgacctttgttgcacgagttgtc 40443647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 26212488 - 26212255
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||||| ||| |||| |||| |||||||||| ||||||||||||||||||||||||| | | |||| |||||||||||    
T  26212488 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatatttattaggtaagaatgtagg 26212389  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccag-aa 212  Q
    ||||||||  |||||          ||||||||||| ||   ||||||||||||||||||||  ||||||||||||||||||||| |||| |||||| ||    
T  26212388 atgagattgaacctg----------gaatgaaacttgtgaggttctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 26212299  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    ||||| ||  |||||| ||||||||||||||||||||||||||||    
T  26212298 acagagtgatttgtta-gttttgcgacctttgttgcacgagttgt 26212255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 18302681 - 18302498
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||| ||| |||| |||| ||||||||||  |||||||||||||||||||||||| | | ||||||||||||||||    
T  18302681 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcccttgagtgcctgaacatgtctaatatttattaggaaagaatgtagg 18302582  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||||||||| ||||||||||||||| |  | ||||| ||||||||||||   |||| ||||||||||||||||    
T  18302581 atgagattgaacctggaaagacttagaatgaaactttggataatctga-ctgaactcgccatggcgagcagaggctctcgcctcg 18302498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 39267264 - 39267447
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||| ||| |||| |||| ||||| |||| ||||||||||||||||||||||||| | | ||||||||||||||||    
T  39267264 cagagagcatgcaagattttgtgattttgacttttgagttgaaccttatatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 39267363  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||||||||| ||||||||||||||| |  | ||||| ||||||||||||   |||| ||||||||||||||||    
T  39267364 atgagattgaacctggaaagacttagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcg 39267447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 29 - 254
Target Start/End: Original strand, 17061593 - 17061819
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| ||||||||  |||||    
T  17061593 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 17061692  T
Q  129 gaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt 227  Q
    || ||| |||||||| |||||||  ||| |||||||||||||||| |   ||||||||||||||||||||| |||| ||| |   ||||||||| |  ||    
T  17061693 gatagattttagaataaaactttgagaa-tctgacctgaactcgcgatggcgagtagaggctctcgcctcgcgagtgacctatttacagaatgcttgttt 17061791  T
Q  228 agg-ttttgcgacctttgttgcacgagt 254  Q
    ||| |||||||| |||||| ||||||||    
T  17061792 aggattttgcgatctttgtcgcacgagt 17061819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 29 - 203
Target Start/End: Complemental strand, 44116992 - 44116819
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||| ||||| ||| |||| |||||||||| |||| ||||||| ||||||||||||||||||| | ||||||||||||||| ||||||||  ||| |    
T  44116992 atttcgtaattttgactcttgagttgatccttatatgcctttgagtccctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacccg 44116893  T
Q  129 gaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||   |||| |||||||||||||||| ||||    
T  44116892 gaaagatttagaatgaaactttgggaa-tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 44116819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 9751168 - 9751351
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||| |||||||||| ||||||||||||||||||||||||| | | ||||||||||||||||    
T  9751168 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 9751267  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttg-gaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||| ||  ||||||||||| ||||||||||||||| | ||||| ||| ||||||||||||    ||| ||||||||||||||||    
T  9751268 atgaggttgaacctggaaagacttagaatgaaactttggagaatt-tga-ctgaactcgccatggtgagcagaggctctcgcctcg 9751351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 2831924 - 2832106
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||| |||||||||| ||||||||||||||||||||||||| | | ||||||||||||||||    
T  2831924 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 2832023  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  |||| |||||| |||||||||| |||| |  | |||||| ||||||| |||   |||| ||||||||||||||||    
T  2832024 atgagattgaacctagaaagacttagaatgaa-ctttggagaatctgac-tgaactcaccatggcgagcagaggctctcgcctcg 2832106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 28504919 - 28505102
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||||| ||| |||| |||| ||||||||| |||||||||||||||||||||||||||| | |||||||||||||||     
T  28504919 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 28505018  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||| ||||| ||||||||||| ||| |  | ||||||| ||||||||||   |||| ||||||||||||||||    
T  28505019 atgagattgaacctgaaaagacttagaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcg 28505102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 15754505 - 15754689
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||   |||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||| ||||     
T  15754505 cagagagcatgcaagatttcgaatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtaga 15754604  T
Q  114 atgagattagacctggaaagatttagaatg-aaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||||||| | |||||||| |||||||||  | ||||||| ||||| |||||  |||| | ||||||||||||||    
T  15754605 atgagattgaacctggaaaaacttagaatgaaaacttttgagaatctgacc-gaacttgccacggcgagcataggctctcgcctcg 15754689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 29 - 209
Target Start/End: Original strand, 12756350 - 12756529
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||| ||||| ||| |||| ||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| ||||||||  |||||    
T  12756350 atttcgtaattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 12756449  T
Q  129 gaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttaccca 209  Q
    ||    || ||||||||  ||||||||  ||||||||||||| |||   ||||||||||||||||||||| ||||| ||||    
T  12756450 gattatttaagaatgaactttttggaa-gctgacctgaactcaccatggcgagtagaggctctcgcctcgcgagttgccca 12756529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 34201286 - 34201103
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| ||||||||||||||||||| |||||||||||||||||| |  | |||||||| |||     
T  34201286 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgatcaagaaagaatttaga 34201187  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||| ||||| ||||||||||| ||| |  | ||||| ||||||||||||   |||| ||||||||| ||||||    
T  34201186 atgagattgaacctgtaaagacttagaatgaaaatttggagaatctga-ctgaactcgccatggcgagcagaggctcttgcctcg 34201103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 810760 - 810936
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| |||||||||||||| |||||||||||||||||| ||||||||| | ||||||||| || || || |||||  |||    
T  810760 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatatctaataatgattaggaaagattggagaataagattgaacc 810859  T
Q  127 tggaaag-atttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
    ||||||| ||||||||||||  |||  ||| | | ||||||||||||||   ||||||||||||||||||||| ||||    
T  810860 tggaaagaatttagaatgaatttttgtgaactgt-acctgaactcgccatggcgagtagaggctctcgcctcgcgagt 810936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 227
Target Start/End: Complemental strand, 44014664 - 44014464
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| ||||| |||||||| |||||||||||||||||||||||||||| | ||||||||| || || ||||||||  |||    
T  44014664 agatttcgtaattttgacttttgagttgatacttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 44014565  T
Q  127 tggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttg 225  Q
    |||||||| ||||||||| || |||||  | |   ||||||||||||||    |||||||||||||||||||| ||| || || |  |||||||||||||    
T  44014564 tggaaagattttagaatg-aatttttgttagttgcacctgaactcgccatggtgagtagaggctctcgcctcgcgagctaaccggttacagaatgccttg 44014466  T
Q  226 tt 227  Q
    ||    
T  44014465 tt 44014464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 256
Target Start/End: Complemental strand, 16056778 - 16056587
Alignment:
Q  67 ttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaa-agatttagaatgaaacttttggaattctgacctg 165  Q
    ||||| || ||||||||||| ||||||| | ||||||||| | |||  |||||||  |||||||| || || |||||| |  ||| ||||||   |||||    
T  16056778 ttttgtgtacctgaacatgtataataatgaataggaaagattttagattgagattgaacctggaatagtttaagaatggatttttgggaattac-acctg 16056680  T
Q  166 aactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggtt--ttgcgacctttgttgcacgagttg 256  Q
    ||||||||| | ||||||||||||||||||||| |||||||||||  ||||||||||||||||||||   ||||| |||||| ||||||||||    
T  16056679 aactcgccatagcgagtagaggctctcgcctcgcgagttacccagttacagaatgccttgttaggttaaatgcgatctttgtagcacgagttg 16056587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 11995676 - 11995768
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaaga 106  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| ||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  11995676 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 11995768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 10589386 - 10589296
Alignment:
Q  168 ctcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    ||||||||  |||| |||||||||||||||| |||| ||||||||||||| || |||||||| ||||||||||||| ||||||||||||||    
T  10589386 ctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgaccttttttgcacgagttgtc 10589296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 257
Target Start/End: Original strand, 12255454 - 12255653
Alignment:
Q  59 ttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaa-agatttagaatgaaacttttggaatt 157  Q
    ||||||| |||||||||| ||||||||| ||||||| | ||||||||| | |||  |||||||  |||||||| || || ||||||||  ||| ||| ||    
T  12255454 ttagatgattttgagtgcttgaacatgtataataatgattaggaaagattctagattgagattgaacctggaatagtttaagaatgaatttttgggagtt 12255553  T
Q  158 ctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttagg-ttttgcgacctttgttgcacgagttg 256  Q
       |||||||||||||| | ||||||||||||||||||||| ||||| |||||  ||||||||| |  ||||| |||||||| ||||||  |||||||||    
T  12255554 ac-acctgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacagaatgcttgtttaggattttgcgatctttgtcacacgagttg 12255652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 227
Target Start/End: Complemental strand, 68236 - 68036
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| |||||||||| ||| ||| ||||||||||| |||||||||||| | ||||||||| || ||  |||||||  |||    
T  68236 agatttcgtaattttgacttttgagttgatccttaaatgttttcgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacc 68137  T
Q  127 tggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgt 226  Q
    |||||  |||||  |  |||||| ||| | |   |  |||||||||||   ||||||||||||||||||||| ||| || ||||  ||||||||||||||    
T  68136 tggaataatttaagaacaaacttgtgggagttacagatgaactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgt 68037  T
Q  227 t 227  Q
    |    
T  68036 t 68036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 18006131 - 18006064
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataat 94  Q
    ||||||||| ||||| ||| |||| |||||||||||||| ||||||||||||||||||||||||||||    
T  18006131 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataat 18006064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 232
Target Start/End: Complemental strand, 22073376 - 22073201
Alignment:
Q  57 ccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaa-agatttagaatgaaacttttggaa 155  Q
    ||||||| | |||||||||||||||||||| ||||||| | ||| ||||| | ||| ||||||||  |||| ||| || || |||||| |  ||| |||     
T  22073376 ccttagaggtttttgagtgcctgaacatgtgtaataatgattagaaaagattctagaatgagattgaacctagaatagtttaagaatggatttttgggag 22073277  T
Q  156 ttctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggtt 232  Q
    ||   ||||||||||||||   ||||||||||| ||||||||| |||||||||||  ||||||||| ||||||||||    
T  22073276 ttac-acctgaactcgccatggcgagtagaggccctcgcctcgcgagttacccagttacagaatgctttgttaggtt 22073201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 19649103 - 19649170
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaa 81  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| ||||||||| |||||||||||||||    
T  19649103 cagagagcatgcaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 19649170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 47832273 - 47832219
Alignment:
Q  52 ttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaaga 106  Q
    |||| ||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  47832273 ttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 47832219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 232
Target Start/End: Original strand, 16219372 - 16219552
Alignment:
Q  52 ttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaa-agatttagaatgaaacttt 150  Q
    |||| ||||||||| ||||||||| || ||| ||| ||||||| | ||||||||| | |||  |||||||  |||||||| || || ||||||||  |||    
T  16219372 ttgaaccttagatgtttttgagtgtctaaacttgtataataatgattaggaaagattttagattgagattgaacctggaatagtttaagaatgaattttt 16219471  T
Q  151 tggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggtt 232  Q
     ||| ||   || |||||||||||   ||||||||||| ||||||||| |||||  | ||  ||||||||||||||||||||    
T  16219472 gggagttac-acgtgaactcgccatggcgagtagaggccctcgcctcgcgagttgtctagttacagaatgccttgttaggtt 16219552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 2760613 - 2760549
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataa 93  Q
    ||||||| ||||| ||| |||| |||| |||||||||||||||||||||| || |||| ||||||    
T  2760613 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataa 2760549  T

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Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 3272273 - 3272209
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataa 93  Q
    ||||||| ||||| ||| |||| |||| |||||||||||||||||||||| || |||| ||||||    
T  3272273 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataa 3272209  T

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Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 24054969 - 24054897
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgt 86  Q
    ||||| ||||||||||||| ||  |||| ||| |||| |||| ||||||||| ||||||||||||||| ||||    
T  24054969 cagagtgcatgcaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgt 24054897  T

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Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 15008263 - 15008356
Alignment:
Q  162 cctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt--aggttttgcgacctttgttgcacgag 253  Q
    ||||||||| ||| | ||||||||||||||||||||| ||||| |||||    ||||| |||||||   |||||||||| |||||| |||||||    
T  15008263 cctgaactcaccatagcgagtagaggctctcgcctcgcgagttgcccagttgtagaataccttgtttagggttttgcgatctttgtcgcacgag 15008356  T

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Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 2279883 - 2279980
Alignment:
Q  161 acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    |||||||||||||| | ||||||||||| ||||||||| ||||| || ||  | ||||||| |  ||||| |||||||| ||||||  ||||||||||    
T  2279883 acctgaactcgccatagcgagtagaggccctcgcctcgcgagttgcctagttatagaatgcttgtttaggattttgcgatctttgtcacacgagttgt 2279980  T

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Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 100
Target Start/End: Original strand, 9032931 - 9032972
Alignment:
Q  59 ttagatgcttttgagtgcctgaacatgtctaataataactag 100  Q
    ||||||| ||||||||||||||| |||| |||||||||||||    
T  9032931 ttagatgattttgagtgcctgaatatgtataataataactag 9032972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 18154469 - 18154522
Alignment:
Q  28 gatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||| ||||| ||| |||| |||| ||||||||| |||||||||||||||    
T  18154469 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 18154522  T

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Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 9389462 - 9389526
Alignment:
Q  163 ctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt 227  Q
    ||||||||||||   ||||||||||||||||||||| ||| ||  |||  |||||||||||||||    
T  9389462 ctgaactcgccatggcgagtagaggctctcgcctcgcgagctaagcagttacagaatgccttgtt 9389526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 16324456 - 16324392
Alignment:
Q  67 ttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaa 131  Q
    |||||||||| ||||||||||||||||| | ||||||||| || ||  |||||||  ||||||||    
T  16324456 ttttgagtgcttgaacatgtctaataatgattaggaaagattggagtttgagattgaacctggaa 16324392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 21064927 - 21064971
Alignment:
Q  161 acctgaactcgccacaacgagtagaggctctcgcctcgtgagtta 205  Q
    |||| |||||||||   ||||||||||||||||||||||||||||    
T  21064927 accttaactcgccatggcgagtagaggctctcgcctcgtgagtta 21064971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 165; Significance: 2e-88; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 18439037 - 18438793
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||      
T  18439037 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaaa 18438938  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||| | |||||  |||| |||||||||||||||| |||| |||||||||    
T  18438937 atgagattgaacctggaaagatttagaatgaaacttttggaattctgacctgaagttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 18438838  T
Q  214 cagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    |||| || ||||||||| |||||||||||||||||||||||||||    
T  18438837 cagagtgtcttgttaggtttttgcgacctttgttgcacgagttgt 18438793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 11424381 - 11424625
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||     
T  11424381 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaataatgtaga 11424480  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||||||||||||||||||||| |||  ||| |||||    
T  11424481 atgagattgaacctggaaagatttagaatgaaactttttgaactctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagcgacctagaaa 11424580  T
Q  214 cagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    |||| || ||||||||| |||||||||||||||||||||||||||    
T  11424581 cagagtgtcttgttaggtttttgcgacctttgttgcacgagttgt 11424625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 26687390 - 26687151
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||    
T  26687390 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctaaacatgtctaataatgattaggaaagaatgtagg 26687291  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||||| ||||||||||||| ||| |||||||||||||||||||||  |||| |||||||||||||||| |||| ||||||||    
T  26687290 atgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 26687191  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacga 252  Q
    ||||| || ||||||||||||| |||||||||||||||||    
T  26687190 acagagtgtcttgttaggttttacgacctttgttgcacga 26687151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 25476003 - 25476247
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||| ||| |||| |||||||||||||| |||||||| ||||||||||||||||||| | || ||||||||||||     
T  25476003 cagagagcatgcaagattttgtgattttgacttttgagttgatccttagatgtttttgagtacctgaacatgtctaataatgattatgaaagaatgtaga 25476102  T
Q  114 atgagattagacctggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    |||||||   ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||    
T  25476103 atgagatcgaacctggaaagattttagaatgaaacttttggaa-tctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaa 25476201  T
Q  213 acagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  25476202 acagagtgccttgttaggattttgcgacctttgttgcacgagttgt 25476247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 40213339 - 40213583
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| ||| |||| |||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  40213339 cagagagcttgcaagatttcgtgattttgacttttgagttgatcattagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 40213438  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||||| ||||||| ||||||||| | ||| |||||||||||||||  |||| |||||||||||||||| |||| ||||||||    
T  40213439 atgagattgaacctggaaagattgtagaatg-aacttttgggaatctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 40213537  T
Q  213 acagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  40213538 acagagtgccttgttaggattttgcgacctttgttgcacgagttgt 40213583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 17 - 257
Target Start/End: Complemental strand, 14573088 - 14572847
Alignment:
Q  17 agagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatg 116  Q
    |||||||||||||||| ||| |||| ||| |||| ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||| |||    
T  14573088 agagcatgcaagattttgtgtttttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatg 14572989  T
Q  117 agattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacag 216  Q
    |||||  ||||||||||| |||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||||||||| |||| ||| ||||||||    
T  14572988 agattgaacctggaaagacttagaatgaaacctttggaaatctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctagaaacag 14572889  T
Q  217 aatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    | | |||||||||| |||||||||||||||||||||||||||    
T  14572888 agtaccttgttaggtttttgcgacctttgttgcacgagttgt 14572847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 14576451 - 14576695
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||| |||||||||||||||||||||||| || | ||| |||||||||||     
T  14576451 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaattatgattagaaaagaatgtaga 14576550  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    |||| |||  ||||||||||| |||||||||||| ||||||| |||||||||||| ||||||  ||||||||||||||||||||| |||| ||| |||||    
T  14576551 atgacattgaacctggaaagacttagaatgaaacctttggaaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacctagaaa 14576650  T
Q  214 cagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    || | |||||||||||| |||||||||||||||||||||||||||    
T  14576651 caaagtgccttgttaggattttgcgacctttgttgcacgagttgt 14576695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 15 - 258
Target Start/End: Complemental strand, 17488359 - 17488114
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||| ||| ||| ||||  |||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||    
T  17488359 agagagcatgcaagatttcgtgaatttgacttttgagatgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 17488260  T
Q  115 tgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccag-aa 212  Q
    |||||||  ||||||||||||| ||||||||||||| | | ||||||||||||| |||||||  |||| |||||||||||||||| |||| ||| || ||    
T  17488259 tgagattgaacctggaaagattgtagaatgaaacttgtaggattctgacctgaaatcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaa 17488160  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  17488159 acagagtgccttgttagattttgcgacctttgttgcacgagttgtc 17488114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 23082979 - 23083223
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||  |||||| |||||||| ||| |||| |||||||||||||||||||||||||||| | |||||||||| | | ||||| | ||||||||    
T  23082979 cagagagcatgtcagattttgtgattttgacttttgagttgatccttagatgcttttgagtgcctggatatgtctaatagtgattaggacaaaatgtagg 23083078  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctga-cctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||| ||| |||||||||   ||||||||||||||||||||| || | ||||||||    
T  23083079 atgagattggacctggaaagatttagaatgaaactttttggattctgacccttaactcgccatggcgagtagaggctctcgcctcgcgaatgacccagaa 23083178  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    ||| | || ||||||||||||||||||||||||||||||||||||    
T  23083179 acatagtgtcttgttaggttttgcgacctttgttgcacgagttgt 23083223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 14 - 238
Target Start/End: Complemental strand, 14973357 - 14973132
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||     
T  14973357 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 14973258  T
Q  114 atgagattagacctggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||| ||| | ||||| ||||||| | |||||||||||||||||||||||||||||||  |||| ||||||||||||||||  ||| ||||||||    
T  14973257 atgagattaaaccagaaaagattttagaaag-aacttttggaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaa 14973159  T
Q  213 acagaatgccttgttagg-ttttgcga 238  Q
    ||||| |||||||||||| ||||||||    
T  14973158 acagagtgccttgttaggattttgcga 14973132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 66 - 258
Target Start/End: Complemental strand, 13442725 - 13442532
Alignment:
Q  66 cttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaagatt-tagaatgaaacttttggaattctgacct 164  Q
    ||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||  ||||||||||||| ||||||||||||| ||| ||||||||||    
T  13442725 cttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacct 13442626  T
Q  165 gaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    ||||| |||||  |||| |||||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  13442625 gaacttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagattttgcgacctttgttgcacgagttgtc 13442532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 15 - 258
Target Start/End: Complemental strand, 17499841 - 17499596
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    |||||| |||||||||||| ||||||| ||| ||||  |||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||    
T  17499841 agagagaatgcaagatttcatgattttgacttttgagatgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 17499742  T
Q  115 tgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccag-aa 212  Q
    |||||||  ||||||||||||| ||||||||||||| | | ||||||||||||| |||||||   ||| |||||||||||||||   ||| ||| || ||    
T  17499741 tgagattgaacctggaaagattgtagaatgaaacttgttggattctgacctgaattcgccacggtgagcagaggctctcgcctctctagtgacctagaaa 17499642  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  17499641 acagagtgccttgttagattttgcgacctttgttgcacgagttgtc 17499596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 20698065 - 20698299
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||||| ||| |||| |||| ||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||    
T  20698065 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtagg 20698164  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  ||||||||          |||||||| ||| |||||||||||||||||||||  |||| |||||||||||||||| |||| |||||||||    
T  20698165 atgagattgaacctggaa----------tgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 20698254  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || |||||||| ||||||||||||||| ||||||||||||    
T  20698255 cagagtgacttgttagattttgcgacctttgtggcacgagttgtc 20698299  T

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Target: chr3; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 17247904 - 17248145
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||  ||||||||||||||||||| ||| |||| |||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||     
T  17247904 cagagaggttgcaagatttcgtgattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 17248003  T
Q  114 atgagattagacctggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||| |||||||||||||||| |||| ||||||||||||||||||   |||| |||||||||||||||| |||| ||||||      
T  17248004 atgagattgaacctggaaagattttagaatgaaactttgggaa-tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagtt 17248102  T
Q  213 acagaatgccttgttag-gttttgcgacctttgttgcacgagt 254  Q
    ||||||||| |  ||||  |||||||| |||||| ||||||||    
T  17248103 acagaatgcttgtttagaattttgcgatctttgtcgcacgagt 17248145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 18 - 254
Target Start/End: Original strand, 53070321 - 53070557
Alignment:
Q  18 gagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatga 117  Q
    |||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| ||||    
T  53070321 gagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatga 53070420  T
Q  118 gattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacaga 217  Q
    ||||  |||||||   ||| ||||||||  ||||||||  |||||||||||||||||   ||||||||||||||||||||| ||||| ||||   |||||    
T  53070421 gattgaacctggattaattaagaatgaactttttggaa-gctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacaga 53070519  T
Q  218 atgccttg-ttagg-ttttgcgacctttgttgcacgagt 254  Q
    | |||||| ||||| |||||||| |||||| ||||||||    
T  53070520 a-gccttgtttaggattttgcgatctttgtcgcacgagt 53070557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 12340255 - 12340072
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||| |||||||||| ||||||||||||||||||||||||| | | ||||||||||||||||    
T  12340255 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 12340156  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||||||||| ||||||||||||||| |  | ||| | ||||||||||||   |||| ||||||||||||||||    
T  12340155 atgagattgaacctggaaagacttagaatgaaactttggagaatct-aactgaactcgccatggcgagcagaggctctcgcctcg 12340072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 30030331 - 30030097
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| | ||| ||| |||| |||| |||||||||| |||||||| |||||||||||||||||| | || |||||||||| ||    
T  30030331 cagagagcatgcaagatttcgtaaatttgacttttgagttgaaccttagatgcctttgagtgtctgaacatgtctaataatgattacgaaagaatgtggg 30030232  T
Q  114 atgagattagacctggaaagatttagaatgaaac-ttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagtta-cccaga 211  Q
    ||||||||  |||||          |||||||||  |||||||||||||||| |||||||||   |||| |||||||||||||||| |||| | |||||     
T  30030231 atgagattgaacctg----------gaatgaaacagtttggaattctgacct-aactcgccatggcgagcagaggctctcgcctcgcgagtaatcccag- 30030144  T
Q  212 aacagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  30030143 aacagaatgccttgttagattttgcgacctttgttgcacgagttgtc 30030097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 14669263 - 14669080
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||| |||||||||   |||||||||||||||||||||||| | | ||||||||||||||||    
T  14669263 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatgtctaatattgaataggaaagaatgtagg 14669164  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||||||||| ||||||||||||||| |  | ||||| ||||||||||||   |||| |||||||||| |||||    
T  14669163 atgagattgaacctggaaagacttagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcacctcg 14669080  T

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Target: chr3; HSP #19
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 124 - 257
Target Start/End: Complemental strand, 43841325 - 43841191
Alignment:
Q  124 acctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgcc 222  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||| | |||| ||||||||| |||| ||||||||||||| || |    
T  43841325 acctggaaagattgtagaatgaaacttgtggaattctgacctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacccagaaacagagtgtc 43841226  T
Q  223 ttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    |||||||||||||||||||||||| ||||||||||    
T  43841225 ttgttaggttttgcgacctttgttacacgagttgt 43841191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 12851984 - 12852165
Alignment:
Q  16 gagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggat 115  Q
    |||||||||||||||||||||||||| ||| |||| || | | ||||||||  |||||||||||||||||||||||| | | ||||||||||||||||||    
T  12851984 gagagcatgcaagatttcgtgattttgacttttgagtttaactttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggat 12852083  T
Q  116 gagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||  | ||||||||| |||||||||||||||||  | ||||| ||||||||||||   |||| ||||||||| ||||||    
T  12852084 gagattgaatctggaaagacttagaatgaaacttttgataatctga-ctgaactcgccatggcgagcagaggctcttgcctcg 12852165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 12399698 - 12399468
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||| |||||| || ||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||| ||| ||||    
T  12399698 cagagagcatgctagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatatagg 12399599  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||| | ||  |||||          ||||||||||| ||   ||||||||||||||||||||  |||||| |||||||||||||  |||| |||||||||    
T  12399598 atgggtttgaacctg----------gaatgaaacttgtgaggttctgacctgaactcgccacggcgagtaaaggctctcgcctcacgagtgacccagaaa 12399509  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    |||  || ||||||| ||||| ||||||||||||||||||||||    
T  12399508 cag--tgacttgtta-gttttccgacctttgttgcacgagttgt 12399468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 14179825 - 14179693
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||     
T  14179825 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 14179726  T
Q  114 atgagattagacctggaaagatttagaatgaaa 146  Q
    ||||||||  || |||||||| |||||||||||    
T  14179725 atgagattgaacttggaaagacttagaatgaaa 14179693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 14666108 - 14665925
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||  ||||||| ||| |||| |||| |||||||||   ||||||||||||||||| |||||| | | ||||||||||||||||    
T  14666108 cagagagcatgcaagattttatgattttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtagg 14666009  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||||||||| ||||||||||||||| |  | ||||| |||||||||| |   |||| ||||||||||||||||    
T  14666008 atgagattgaacctggaaagacttagaatgaaactttggagaatctga-ctgaactcgcaatggcgagcagaggctctcgcctcg 14665925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 14735621 - 14735438
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||  ||||||| ||| |||| |||| |||||||||   ||||||||||||||||| |||||| | | ||||||||||||||||    
T  14735621 cagagagcatgcaagattttatgattttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtagg 14735522  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||||||||| ||||||||||||||| |  | ||||| |||||||||| |   |||| ||||||||||||||||    
T  14735521 atgagattgaacctggaaagacttagaatgaaactttggagaatctga-ctgaactcgcaatggcgagcagaggctctcgcctcg 14735438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 43842681 - 43842574
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||| ||||||| ||| || | ||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||    
T  43842681 cagagagcatgcaagatttcatgattttgactttttagttgatccttagatgcttttgagtgcctgagcatgtctaataatgattaggaaagaatgtagg 43842582  T
Q  114 atgagatt 121  Q
    ||||||||    
T  43842581 atgagatt 43842574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 13209946 - 13210129
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| |||||||||||||||||||||| ||||||||||||| | | |||||||||| ||||     
T  13209946 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaacatgtctaata-tgattaggaaagaaagtaga 13210044  T
Q  114 atgagattagacctggaaagatttagaatgaaa-cttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||||||||| ||||||||||| || |||  | | ||||| ||||||||||   |||||||||||||||||||||    
T  13210045 atgagattgaacctggaaagacttagaatgaaaactcttgagaatgtgacc-gaactcgccatggcgagtagaggctctcgcctcg 13210129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 4588457 - 4588569
Alignment:
Q  38 tttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaagattt 137  Q
    |||| ||| |||| |||| |||||||||| ||||||||||||||||||||||||| | | ||||||||||||||||||||||||  ||||| ||||| ||    
T  4588457 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctgtaaagactt 4588556  T
Q  138 agaatgaaacttt 150  Q
    |||||||||||||    
T  4588557 agaatgaaacttt 4588569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 17247142 - 17247236
Alignment:
Q  18 gagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtag 112  Q
    |||| ||||||||||||||||||| ||| |||| |||||||||||||| ||||||||||| |||||||||||||||| | |||||||||||||||    
T  17247142 gagcttgcaagatttcgtgattttgacttttgagttgatccttagatgtttttgagtgccggaacatgtctaataatgattaggaaagaatgtag 17247236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 198
Target Start/End: Complemental strand, 16097820 - 16097649
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| |||||||||| ||| ||||||||| |||||||||||||||||| | ||||||||| || || ||||||||  |||    
T  16097820 agatttcgtaattttgacttttgagttgatccttaaatgtttttgagtgtctgaacatgtctaataattattaggaaagattggagaatgagattgaacc 16097721  T
Q  127 tggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    || ||||| |||||||||||  |||  |||||  |||||||||||||||    ||||||||||||||||||||    
T  16097720 tgaaaagattttagaatgaatttttgtgaatt-ggacctgaactcgccatggtgagtagaggctctcgcctcg 16097649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 12933941 - 12934117
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    |||||||||  |||| ||| |||| |||||||||||||| |||||||||||||||||||||||||||| | ||||||||| |  || ||||||||  |||    
T  12933941 agatttcgtacttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacc 12934040  T
Q  127 tggaaaga-tttagaatgaaacttttggaattctg-acctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
    |||||||| |||||||||||| |||  |||  ||| ||||||||||||||   |||| |||| ||||||||||| ||||    
T  12934041 tggaaagattttagaatgaaattttgtgaa--ctgaacctgaactcgccatggcgagcagagactctcgcctcgcgagt 12934117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 32308158 - 32307983
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| ||||||||||||||||||||||||||||||||| ||||||||| | ||||||||| || || ||||||||  |||    
T  32308158 agatttcgtaattttgacttttgagttgatccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagattggagaatgagattgaacc 32308059  T
Q  127 tggaaaga-tttagaatgaaacttttggaattctg-acctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
    | | |||| |||||||||||  |||||| |  ||| ||||||||||||||   |||| |||||||||||||||| ||||    
T  32308058 taggaagactttagaatgaa--ttttggga-actgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 32307983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 145
Target Start/End: Original strand, 49389275 - 49389394
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| |||||||||||||| |||||||||||||||||||||||||||| | ||||||||| || || ||||||||  |||    
T  49389275 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 49389374  T
Q  127 tggaaaga-tttagaatgaa 145  Q
    |||| ||| |||||||||||    
T  49389375 tggagagactttagaatgaa 49389394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 9513380 - 9513274
Alignment:
Q  47 ttgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaaga-tttagaatgaa 145  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |  || ||||||||  ||||| ||||| |||||||||||    
T  9513380 ttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaatgaa 9513281  T
Q  146 acttttg 152  Q
    | |||||    
T  9513280 atttttg 9513274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 9521355 - 9521249
Alignment:
Q  47 ttgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaaga-tttagaatgaa 145  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |  || ||||||||  ||||| ||||| |||||||||||    
T  9521355 ttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaatgaa 9521256  T
Q  146 acttttg 152  Q
    | |||||    
T  9521255 atttttg 9521249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 49667715 - 49667890
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    |||||||||  |||| ||| |||| |||||||||||||| ||||||| |||||||||||||||||||| | ||||||||| |  || ||||||||  |||    
T  49667715 agatttcgtacttttgacttttgagttgatccttagatg-ttttgagcgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacc 49667813  T
Q  127 tggaaaga-tttagaatgaaacttttggaattctg-acctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
    |||||||| ||||||||||||  ||  |||  ||| ||||||||||||||   |||| |||||||||||||||| ||||    
T  49667814 tggaaagattttagaatgaaatattgtgaa--ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 49667890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 232
Target Start/End: Complemental strand, 324693 - 324520
Alignment:
Q  59 ttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg-gaa-agatttagaatgaaacttttggaat 156  Q
    ||||||| ||||||||||||||| |||| ||||||| | ||||||||| ||||| |||||||| || ||| ||| || || ||||||||  ||| ||| |    
T  324693 ttagatgattttgagtgcctgaatatgtataataatgattaggaaagattgtagaatgagatt-gaactgagaatagtttaagaatgaatttttgggagt 324595  T
Q  157 tctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggtt 232  Q
    |   |||||||||||||| | ||||||||||||||||||||| |||||||| ||  ||||||  ||||||||||||    
T  324594 tgc-acctgaactcgccatagcgagtagaggctctcgcctcgcgagttaccaagttacagaacaccttgttaggtt 324520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 1644314 - 1644489
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| ||||||||| |||| |||||||||||||||||||||| ||||| | ||||||||| |  || ||||||||  |||    
T  1644314 agatttcgtaattttgacttttgagttgatccttggatgtttttgagtgcctgaacatgtctgataatgattaggaaagattagagaatgagattgaacc 1644413  T
Q  127 tggaaaga-tttagaatgaaacttttg-gaattctg-acctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
    ||  |||| |||||||||||  ||||| |||  ||| ||||||||||||||   |||| |||||||||||||||| ||||    
T  1644414 tgagaagactttagaatgaa--ttttgtgaa--ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 1644489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 12171750 - 12171827
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaaga 106  Q
    ||||||| ||||| ||| || | |||||||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  12171750 atttcgtaattttgactttttagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 12171827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 16104268 - 16104191
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaaga 106  Q
    ||||||| ||||| ||| |||| |||||||||||||| || ||||||||||||||||||||||||| | |||||||||    
T  16104268 atttcgtaattttgacttttgagttgatccttagatgtttctgagtgcctgaacatgtctaataatgattaggaaaga 16104191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 16809887 - 16809785
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||||||| |||||||||  |||| ||| |||| |||| ||||| |||||||||||||| ||||||    ||||||| | |||||||||||||||||    
T  16809887 agagagcatgctagatttcgtatttttgacttttgagttgaaccttaaatgcttttgagtgcttgaaca----taataatgattaggaaagaatgtagga 16809792  T
Q  115 tgagatt 121  Q
    |||||||    
T  16809791 tgagatt 16809785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 15877447 - 15877514
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaa 81  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| ||||||||| |||||||||||||||    
T  15877447 cagagagcatgcaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 15877514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 257
Target Start/End: Original strand, 2050857 - 2051061
Alignment:
Q  52 ttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaagatttagaatgaaactttt 151  Q
    |||| ||||||||| |||||||||||| ||||||| ||||||| | ||||||||| | |||  |||||||  ||| | | || || |||||| |  |||     
T  2050857 ttgaaccttagatgtttttgagtgcctcaacatgtgtaataatgattaggaaagattctagattgagattgaacc-gaatagtttaagaatggatttttg 2050955  T
Q  152 ggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttagg-ttttgcgacctttgttgcac 250  Q
    ||| ||   |||||||||| ||| | ||||||||||||||||||||||||||| |||||  ||| ||||| |  ||||| |||||||| |||||| |||     
T  2050956 ggagttac-acctgaactctccatagcgagtagaggctctcgcctcgtgagttgcccagttacaaaatgcttgtttaggattttgcgatctttgtcgcat 2051054  T
Q  251 gagttgt 257  Q
    |||||||    
T  2051055 gagttgt 2051061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 37250932 - 37251002
Alignment:
Q  162 cctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggtt 232  Q
    ||||||||||||| | ||||||||||||||||||||| ||||| |||||  ||||||  ||||||||||||    
T  37250932 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaacaccttgttaggtt 37251002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 16796875 - 16796806
Alignment:
Q  188 ctctcgcctcgtgagttacccagaaacagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    ||||||||||| |||| |||| |||||||| |||||||| ||  ||||||||||||||||||||| ||||    
T  16796875 ctctcgcctcgcgagtgacccggaaacagagtgccttgtgagactttgcgacctttgttgcacgaattgt 16796806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 254
Target Start/End: Original strand, 52523390 - 52523586
Alignment:
Q  59 ttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaa-agatttagaatgaaacttttggaatt 157  Q
    ||||||| |||||||||||||||||||| ||||||| | ||||||||| | |||  ||| |||  |||||||| || || ||||||  | |||||| | |    
T  52523390 ttagatgattttgagtgcctgaacatgtgtaataattattaggaaagattctagtttgatattgaacctggaacagtttaagaatg-gatttttgggagt 52523488  T
Q  158 ctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttagg-ttttgcgacctttgttgcacgagt 254  Q
       |||||||||||||| | ||||||||||| |||||||   ||||| |||||  ||||||||| |  ||||| |||||||| |||||| ||||||||    
T  52523489 tacacctgaactcgccatagcgagtagaggccctcgcctgacgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagt 52523586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 257
Target Start/End: Complemental strand, 42386790 - 42386670
Alignment:
Q  138 agaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttg-ttagg-ttttg 235  Q
    |||||||||||||||| | |   ||||||||||||||   ||||||||||||||| ||||| ||||| ||||   |||||| |||||| ||||| |||||    
T  42386790 agaatgaaacttttgggagttatacctgaactcgccatggcgagtagaggctctcacctcgcgagttgcccaattacagaa-gccttgtttaggattttg 42386692  T
Q  236 cgacctttgttgcacgagttgt 257  Q
    ||| |||||| |||||||||||    
T  42386691 cgaactttgtcgcacgagttgt 42386670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 1465174 - 1465240
Alignment:
Q  161 acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt 227  Q
    ||||||||| ||||   ||||||||||||||||||||| ||| || ||||  |||||||||||||||    
T  1465174 acctgaacttgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtt 1465240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 15471413 - 15471335
Alignment:
Q  28 gatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaaga 106  Q
    |||||||| ||||| ||  |||| |||| ||||||||| |||||||| ||||||||||| |||| || | |||||||||    
T  15471413 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtccctgaacatgtataatgatgattaggaaaga 15471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 17674209 - 17674258
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcct 78  Q
    ||||||| ||||| ||| |||| |||| ||||||||||||||||||||||    
T  17674209 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 17674258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 22110116 - 22110152
Alignment:
Q  162 cctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||||||| | |||||||||||||||||||||    
T  22110116 cctgaactcgccatagcgagtagaggctctcgcctcg 22110152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 20906 - 20661
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  20906 cagagagcatgtaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 20807  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||||| ||||||||||||| ||| |||||||||||||||||||||  |||| |||||||||||||||| |||  ||| ||||    
T  20806 atgagattgaacctggaaagattatagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacctagaa 20707  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  20706 acagagtgccttgttagattttgcgacctttgttgcacgagttgtc 20661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 161; Significance: 6e-86; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 50209832 - 50210075
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||| ||| |||| |||||| ||| |||| ||||||||||||||||||||||||||| | |||||||||||||||     
T  50209832 cagagagcatgcaagattttgtgattttgacttttgagttgatc-ttatatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 50209930  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||| |||| |||||||||    
T  50209931 atgagattgaacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 50210030  T
Q  214 cagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    |||| |||||||||||| |||||||||||||||||||||||||||    
T  50210031 cagagtgccttgttaggattttgcgacctttgttgcacgagttgt 50210075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 14 - 253
Target Start/End: Complemental strand, 22532772 - 22532532
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22532772 cagagagcatgcaagatttcgtgattttgacttttgatttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22532673  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  |||||||| |||| ||||||| ||||||||||| |||||| ||||||||||||   ||| |||||||||||||||| |||| ||||| ||    
T  22532672 atgagattgaacctggaaggattgtagaatg-aacttttggaaatctgacttgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccaaaa 22532574  T
Q  213 acagaatgccttgttagg-ttttgcgacctttgttgcacgag 253  Q
    ||||| || ||||||||| |||||||||||||||||||||||    
T  22532573 acagagtgacttgttaggattttgcgacctttgttgcacgag 22532532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 34510283 - 34510039
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  34510283 cagagagcttgcaagatttcgtgattttgacttttgagttgattcttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 34510184  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||||| ||||||| ||||||||||| |||||||||||||||||||  |||| |||||||||||||||  |||| ||||||||    
T  34510183 atgagattgaacctggaaagattgtagaatg-aacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaa 34510085  T
Q  213 acagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    ||||| || | ||||||| |||||||||||||||||||||||||||    
T  34510084 acagagtgtcatgttaggtttttgcgacctttgttgcacgagttgt 34510039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 22354190 - 22354434
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||| ||| |||| |||| ||||| |||||||||||||| ||||||||||| ||||| | ||||||| || |||||    
T  22354190 cagagagcatgcaagattttgtgattttgacttttgagttgaaccttatatgcttttgagtgcttgaacatgtcttataatgattaggaaataacgtagg 22354289  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||| ||||| ||||||||||||| ||| |||||||||||||||||||||  |||||||||||||||||||||  ||| ||||||||    
T  22354290 atgagattgaacctggatagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcaagtgacccagaa 22354389  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    ||||| || ||||||||||||||||||||||||||||||||||||    
T  22354390 acagagtgacttgttaggttttgcgacctttgttgcacgagttgt 22354434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 20135690 - 20135446
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||| |||| || ||||| ||| |||| || |||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||    
T  20135690 cagagagcatgcaatattttgtaattttgacttttgagtttatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagg 20135591  T
Q  114 atgagattagacctggaaagatttagaatgaaac-ttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    |||||||| |||||||||||| |||||||||||| |||||||||||||||| ||||||||||   |||| ||| |||||| ||||| |||| ||||||||    
T  20135590 atgagattggacctggaaagacttagaatgaaacattttggaattctgacc-gaactcgccatggcgagcagaagctctcacctcgcgagtaacccagaa 20135492  T
Q  213 acagaatgccttgttaggttt-tgcgacctttgttgcacgagttgt 257  Q
    ||||| || |||||||||||| |||||||||||||| |||||||||    
T  20135491 acagagtgacttgttaggtttatgcgacctttgttgtacgagttgt 20135446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 27250358 - 27250592
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| || || ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  27250358 cagagagcatgcaagatttcgtaatattgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 27250457  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||| ||||  |||||          ||||||||| | ||| |||||||||||||||||||||  |||| |||||||||||||||| |||| || ||||||    
T  27250458 atgggattgaacctg----------gaatgaaacctgtgggattctgacctgaactcgccacgtcgagcagaggctctcgcctcgcgagtgacacagaaa 27250547  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| | ||||||||  ||||||||||||||||||||||||||||    
T  27250548 cagagtcccttgttatattttgcgacctttgttgcacgagttgtc 27250592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 20846848 - 20847081
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||||| ||  |||| ||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||    
T  20846848 cagagagcatgcaagattttgtaattttgacctttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtagg 20846947  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||          ||||||||||| ||   || |||||||||||||||||  |||| ||||||||| |||||| |||| |||||||||    
T  20846948 atgagattgaacctg----------gaatgaaacttgtgaggttttgacctgaactcgccacggcgagcagaggctcttgcctcgcgagtgacccagaaa 20847037  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    |||| || |||||||| |||||||||||||||||||||||||||    
T  20847038 cagagtgacttgttagattttgcgacctttgttgcacgagttgt 20847081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 15 - 254
Target Start/End: Complemental strand, 433509 - 433269
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||| ||||||||| ||||||||| ||| |||| |||||||||||||||||||||||| ||||||||||||| |||| | ||||||||||||||| |    
T  433509 agagagcttgcaagattccgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctattaatgattaggaaagaatgtagaa 433410  T
Q  115 tgagattagacctggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    |||||||  ||||||||||| |||||||||||||||| |||| ||||||||||||||||||   |||| |||||||||||||||| |||| ||||||       
T  433409 tgagattgaacctggaaagattttagaatgaaactttgggaa-tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttg 433311  T
Q  214 cagaatgccttgttagg-ttttgcgacctttgttgcacgagt 254  Q
    || ||||| |  ||||| |||||||| |||||| ||||||||    
T  433310 caaaatgcttgtttaggattttgcgatctttgtcgcacgagt 433269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 21027172 - 21026939
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||| || || ||||| ||  |||| ||||||||||||||||||||||||| ||||||||||||||||| | |||| |||||||||||    
T  21027172 cagagagcatgcaagaatttgtaattttgacctttgagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggtaagaatgtagg 21027073  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||          ||||||||||| ||   ||||||||| ||||||||||  |||| |||||||||||||||| |||| |||||||||    
T  21027072 atgagattgaacctg----------gaatgaaacttgtgaggttctgacctaaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 21026983  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    || | || |||||||| |||||||||||||||||||||||||||    
T  21026982 caaagtgacttgttagattttgcgacctttgttgcacgagttgt 21026939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 38801020 - 38801254
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||| |  |||| ||| |||| |||| | |||||||  ||||||||||||||||||||||||||| | ||||||||||||||||    
T  38801020 cagagagcatgcaagatttcatatttttgacttttgagttgaactttagatgtctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 38801119  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||| ||||  ||||||||          |  ||||| ||| |||||||||||||||||||||  ||||||||||||||||||||| |||| ||| |||||    
T  38801120 atgtgattgaacctggaa----------ttgaacttgtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaaa 38801209  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || |||||||| ||||||||||||||||| ||||||||||    
T  38801210 cagagtgacttgttagattttgcgacctttgttgtacgagttgtc 38801254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 22355803 - 22356037
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||| ||||||||||||| | ||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22355803 cagagaacatgcaagatttcataattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22355902  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||          |||||||| || ||| |||||||||||||||||||||  |||| ||||||| |||| ||| |||| ||| |||||    
T  22355903 atgagattgaacctg----------gaatgaaatttgtgggattctgacctgaactcgccacggcgagcagaggct-tcgcatcgcgagtgacctagaaa 22355991  T
Q  214 cagaatg-ccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || | ||||||| ||||| ||||||||||||||||||||||    
T  22355992 cagagtgacattgttagattttgagacctttgttgcacgagttgtc 22356037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 22357489 - 22357723
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||| ||||||||||||| | ||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22357489 cagagaacatgcaagatttcataattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22357588  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||          |||||||| || ||| |||||||||||||||||||||  |||| ||||||| |||| ||| |||| ||| |||||    
T  22357589 atgagattgaacctg----------gaatgaaatttgtgggattctgacctgaactcgccacggcgagcagaggct-tcgcatcgcgagtgacctagaaa 22357677  T
Q  214 cagaatg-ccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || | ||||||| ||||| ||||||||||||||||||||||    
T  22357678 cagagtgacattgttagattttgagacctttgttgcacgagttgtc 22357723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 20919104 - 20918921
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||  | ||||| ||  |||| |||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||     
T  20919104 cagagagcatgcaagattttataattttgacctttgagttgatccttacatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 20919005  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||| ||||| |||||||  || ||| |  | ||||| ||||||||||||   |||| ||||||||||||||||    
T  20919004 atgagattgaacctgaaaagacttagaatttaaatttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcg 20918921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 256
Target Start/End: Original strand, 52927612 - 52927843
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| |||| ||||||||| |||||||||||||||||||||||||||| | || |||||| || || ||||||||  |||    
T  52927612 agatttcgtaattttgacttttgagttgacccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagattggagaatgagattgaacc 52927711  T
Q  127 tggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttg 225  Q
    |||||||| ||| ||||| || ||||  || |  |||||||||||||||   ||||||||||| ||||||||| || ||  ||||  |||||||||||||    
T  52927712 tggaaagattttggaatg-aattttttaaagttagacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgaccagttacagaatgccttg 52927810  T
Q  226 ttaggtt--ttgcgacctttgttgcacgagttg 256  Q
    |||||||   ||||| |||||| ||||||||||    
T  52927811 ttaggttaaatgcgatctttgtcgcacgagttg 52927843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 21301157 - 21301245
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaa 103  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  21301157 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 21301245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 174
Target Start/End: Original strand, 20091092 - 20091253
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||| |  |||| ||| |||| || | |||||||||| ||||| ||||||||||||||||||| | | |||||  ||||||| |    
T  20091092 cagagagcatgcaagatttcttatttttgacttttgagttaaaccttagatgcctttgattgcctgaacatgtctaatattgattaggagtgaatgtaag 20091191  T
Q  114 atgagattagacctggaaagatttagaatgaaac-ttttggaattctgacctgaactcgcca 174  Q
    |||||||| |||||| ||||| ||||||||||||   |||| ||||||||||||||||||||    
T  20091192 atgagattggacctgaaaagacttagaatgaaacaacttgggattctgacctgaactcgcca 20091253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 33681499 - 33681301
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| |||||||||||||| |||||||| |||||| |||||||||||| | ||||||||| || || ||||||||  |||    
T  33681499 agatttcgtaattttgacttttgagttgatccttagatgtttttgagttcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacc 33681400  T
Q  127 tggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttg 225  Q
    |||||||| ||||||||| || |||||  | |   ||||||||||||||   |||| |||||||||||||||| || ||||||||  ||||| |||||||    
T  33681399 tggaaagattttagaatg-aatttttgtgagttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaattacccagttacagagtgccttg 33681301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 137
Target Start/End: Complemental strand, 22238117 - 22238009
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||| ||||| ||| |||| |||||||||||||  ||||||||||||||||||||||||||||   ||||||||| || || ||||||||| |||||    
T  22238117 atttcgtaattttgacttttgagttgatccttagatatttttgagtgcctgaacatgtctaataatggttaggaaagattggagaatgagattaaacctg 22238018  T
Q  129 gaaagattt 137  Q
    |||||||||    
T  22238017 gaaagattt 22238009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 21754525 - 21754350
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    |||||||||  |||| ||| |||| |||||||||||||| |||||||||||||||||||||||||||| | ||||||||| || || | ||||||  |||    
T  21754525 agatttcgtatttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaaagagattgaacc 21754426  T
Q  127 tggaaaga-tttagaatgaaacttttg-gaattctg-acctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
    ||| |||| |||||||||||  ||||| |||  ||| ||||||||||||||   |||| |||||||||||||||| ||||    
T  21754425 tgggaagactttagaatgaa--ttttgtgaa--ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 21754350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 224
Target Start/End: Complemental strand, 20248757 - 20248570
Alignment:
Q  37 atttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaaga-t 135  Q
    ||||| ||| |||| ||||||| |||||| |||||||||||||||||||||||||||| | |||||||||  | || ||||||||  ||||||| ||| |    
T  20248757 attttgacttttgagttgatccatagatgtttttgagtgcctgaacatgtctaataatgattaggaaagatcggagaatgagattgaacctggagagact 20248658  T
Q  136 ttagaatgaaacttttggaattctg-acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgcctt 224  Q
    ||||||||||  |||  |||  ||| ||||||||||||||   |||||||||||| |||||||| ||| || | ||  ||||||||||||    
T  20248657 ttagaatgaatttttgtgaa--ctgaacctgaactcgccatggcgagtagaggctatcgcctcgcgagctaactagttacagaatgcctt 20248570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 21162231 - 21162124
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||  ||| |||| ||| ||||  ||| ||||| ||||||||||||||||||| | |||||||||  | | |||||||||||||     
T  21162231 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttaaatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtaga 21162132  T
Q  114 atgagatt 121  Q
    ||||||||    
T  21162131 atgagatt 21162124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 22921499 - 22921577
Alignment:
Q  28 gatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaaga 106  Q
    |||||||| ||||| ||  |||| |||| ||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  22921499 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 22921577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 26065295 - 26065202
Alignment:
Q  162 cctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt--aggttttgcgacctttgttgcacgag 253  Q
    ||||||||||||| | ||||||||||||||||||||| ||||| |||||  ||||||| |||||||   |||||||||| |||||| |||||||    
T  26065295 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaataccttgtttagggttttgcgatctttgtcgcacgag 26065202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 22468315 - 22468382
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaa 81  Q
    ||||||||||| ||||||||||  |||| ||| |||| |||| ||||||||| |||||||||||||||    
T  22468315 cagagagcatgtaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 22468382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 43697849 - 43697788
Alignment:
Q  28 gatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtcta 89  Q
    |||||||| ||||| ||| || | |||| ||||||||| |||||||||||||||||||||||    
T  43697849 gatttcgtaattttgacttttaagttgaaccttagatgtttttgagtgcctgaacatgtcta 43697788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 52940464 - 52940506
Alignment:
Q  59 ttagatgcttttgagtgcctgaacatgtctaataataactagg 101  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||    
T  52940464 ttagatgattttgagtgcctgaacatgtataataataattagg 52940506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 21715036 - 21714983
Alignment:
Q  28 gatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||| ||||| ||| |||| |||| ||||||||| |||||||||||||||    
T  21715036 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 21714983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 8761252 - 8761316
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcct 78  Q
    |||||||||||   |||||||| ||||  ||| |||| |||| ||||||||||||||||||||||    
T  8761252 cagagagcatgttggatttcgtaatttggacttttgagttgaaccttagatgcttttgagtgcct 8761316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 8154 - 8394
Alignment:
Q  17 agagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatg 116  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  8154 agagcatgcaagatttcgtgattttgacttttgagttgatcctt-gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatg 8252  T
Q  117 agattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaaca 215  Q
    |||||  ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||   |||||||||||||||||||| |||| |||||||||||    
T  8253 agattgaacctggaaagattgtagaatgaaacttttggaattctggcctaaactcgccacggtgagtagaggctctcgcctcgcgagtgacccagaaaca 8352  T
Q  216 gaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    || || ||||||||||||||||||||| ||||||||||||||    
T  8353 gagtgtcttgttaggttttgcgaccttcgttgcacgagttgt 8394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 407 - 163
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||||    
T  407 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttatatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 308  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||| || |||| |||||||||    
T  307 atgagattgaacctggaaagatttagaatgaaactttttgagttctgacctgaactcgccacagcgagtagaggctctcgccacgcgagtgacccagaaa 208  T
Q  214 cagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    |||| |||||||||||| |||||||| || ||| |||| ||||||    
T  207 cagagtgccttgttaggattttgcgatctgtgtcgcacaagttgt 163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 157; Significance: 1e-83; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 16833 - 17077
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||| || |||| ||| | || ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||     
T  16833 cagagagcatgcaagatttcttgtttttgactttcgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 16932  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||| |||| |||||||||    
T  16933 atgagattgaacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacggagagcagaggctctcgcctcgcgagtgacccagaaa 17032  T
Q  214 cagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    |||| | |||| ||||| |||||||||||||||||||||||||||    
T  17033 cagagtaccttattaggattttgcgacctttgttgcacgagttgt 17077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 78980 - 79096
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||| | ||| |||| |||| |||||||||||||||||||| ||||||||| ||||||| | |||||| ||||||||     
T  78980 cagagagcatgcaagattttgtaattctgacttttgagttgaaccttagatgcttttgagtgcatgaacatgtttaataatgattaggaaggaatgtaga 79079  T
Q  114 atgagattagacctgga 130  Q
    ||||||||  |||||||    
T  79080 atgagattgaacctgga 79096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 156; Significance: 6e-83; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 13594 - 13351
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||    
T  13594 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatgtagga 13495  T
Q  115 tgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    |||||||  | ||| ||||||| ||||||||||||| ||| |||||||||||||||||||||  |||| |||||||||||||||| |||| |||||||||    
T  13494 tgagattgaatctgaaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 13395  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    | || || ||||||||||||||||||||||||||||||||||||    
T  13394 ctgagtgtcttgttaggttttgcgacctttgttgcacgagttgt 13351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 34623 - 34440
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||     
T  34623 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 34524  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||| ||||| ||||||||||| ||| |  | ||||||| ||||||||||   |||| ||||||||||||||||    
T  34523 atgagattgaacctgaaaagacttagaatgaaaatttggagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcg 34440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 23921 - 24164
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||||||||| ||||||||||||||||||||||||||||| | ||||||| |||||||||    
T  23921 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagattcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagga 24020  T
Q  115 tgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaac 214  Q
    |||||||  |||||||||  | ||||||||||||| ||| |||||||||||||||||||||| |||| |||||||||||||||| |||| ||| ||||||    
T  24021 tgagattgaacctggaaaattgtagaatgaaacttgtgggattctgacctgaactcgccacagcgagcagaggctctcgcctcgcgagtgacctagaaac 24120  T
Q  215 agaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    | | ||||||||||| ||||||||||||||||||||||||||||    
T  24121 aaagtgccttgttagattttgcgacctttgttgcacgagttgtc 24164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 153; Significance: 3e-81; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 52415 - 52172
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||  ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  52415 cagagagcatgcaagattttttgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 52316  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||||| ||||||||||||| ||| |||||||||||||||||||||  |||| |||||||||||||||| |||| ||||||||    
T  52315 atgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 52216  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    || || || ||||||||||||||||||| ||||||||||||||||    
T  52215 actgagtgtcttgttaggttttgcgacc-ttgttgcacgagttgt 52172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 167608 - 167842
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||    
T  167608 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagg 167707  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||          |||| |||||||| ||| |||||||||||||||||||||  |||| |||||||||||||||| |||| |||||||||    
T  167708 atgagattgaacc----------tagattgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 167797  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || |||||||| |||||||||||||||||||||| |||||    
T  167798 cagagtgacttgttagattttgcgacctttgttgcacgaattgtc 167842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 1e-80; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 14 - 256
Target Start/End: Original strand, 19303159 - 19303402
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||     
T  19303159 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 19303258  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  ||||| |||||||||||||||||||||||||| |||||||||||||||||||  |||| |||||||||||||||| |||| |||||||||    
T  19303259 atgagattgaacctgaaaagatttagaatgaaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgagagtgacccagaaa 19303358  T
Q  214 cagaatgccttgttagg-ttttgcgacctttgttgcacgagttg 256  Q
    |||| |||||||||||| |||||||| || ||| |||| |||||    
T  19303359 cagagtgccttgttaggattttgcgatctatgtcgcacaagttg 19303402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 255
Target Start/End: Original strand, 18409445 - 18409687
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||| |||||||||||||| ||  |||| ||||||||||||||||||||||||||| |||||||||| |||| | |||||||||||||||     
T  18409445 cagagagcatgcaggatttcgtgattttgacctttgagttgatccttagatgcttttgagtgccttaacatgtctattaatgattaggaaagaatgtaga 18409544  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||  |||| |||||||||||||||   ||| |||||||||    
T  18409545 atgagattgaacctggaaagatttagaatgaaactttttgaattctgacctgaactcgccacggcgagcagaggctctcgcctctctagtgacccagaaa 18409644  T
Q  214 cagaatgccttgttagg-ttttgcgacctttgttgcacgagtt 255  Q
    |||| |||||||||||| |||| ||||||||||||||||||||    
T  18409645 cagagtgccttgttaggattttacgacctttgttgcacgagtt 18409687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 17287414 - 17287658
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  17287414 cagagagcatgcaagatttcgtgattttgacttttgagttgacccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 17287513  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||| ||||  ||||||||||||| ||||||||||||| ||| |||||||||| ||||||||||  ||| |||||||||| | ||||||||| ||||||||    
T  17287514 atgtgattgtacctggaaagattgtagaatgaaacttgtgggattctgacctaaactcgccacggcgattagaggctcttgtctcgtgagtgacccagaa 17287613  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    ||||| || ||||||||| ||||| | ||||||||||||||||||    
T  17287614 acagagtgtcttgttagggtttgctatctttgttgcacgagttgt 17287658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 14 - 256
Target Start/End: Original strand, 22779845 - 22780088
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22779845 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22779944  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||||| ||||||||||||| ||| |||||||||| ||||||||||  | || | |||||||||||||| |||| ||| ||||    
T  22779945 atgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctaaactcgccacggcaagcaaaggctctcgcctcgcgagtaacctagaa 22780044  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttg 256  Q
    ||||| || | |||||||||||| |||||||||||||| |||||    
T  22780045 acagagtgtcctgttaggttttgtgacctttgttgcacaagttg 22780088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 32 - 256
Target Start/End: Complemental strand, 29061025 - 29060800
Alignment:
Q  32 tcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaa 131  Q
    |||||||||  ||| |||| |||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||||||||||||||  ||||||||    
T  29061025 tcgtgatttcgacttttgagttgatccttagatgcttttgagtgcctgaacatgtccaataatgattaggaaggaatgtaggatgagattgaacctggaa 29060926  T
Q  132 agatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttagg 230  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||| ||||||||||||    
T  29060925 agattgtagaatgaa-cttttggaaatctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg 29060827  T
Q  231 -ttttgcgacctttgttgcacgagttg 256  Q
     ||||||||||||||||||||||||||    
T  29060826 attttgcgacctttgttgcacgagttg 29060800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 20637915 - 20638146
Alignment:
Q  17 agagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatg 116  Q
    ||||||| ||||||||||| ||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  20637915 agagcatccaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatg 20638014  T
Q  117 agattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacag 216  Q
    |||||  ||||||||          |||||||| ||| |||||||||||||||||||||  |||| | |||||||| ||||| |||| ||||||||||||    
T  20638015 agattgaacctggaa----------tgaaacttgtgggattctgacctgaactcgccacggcgagcaaaggctctcacctcgcgagtgacccagaaacag 20638104  T
Q  217 aatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    | ||||||||||| ||||||||||||||||||||||||||||    
T  20638105 agtgccttgttagattttgcgacctttgttgcacgagttgtc 20638146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 20594276 - 20594032
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||||||| |||| |||||||||||||| |||||||||||| |||||||||||  || | |||| |||||||||||    
T  20594276 cagagagcttgcaagatttcgtgatttttacttttgagttgatccttagatgtttttgagtgcctaaacatgtctaaatatgattagggaagaatgtagg 20594177  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||||| |||||| |||||||||||| |||||||||||||||| ||  |||| |||||||||||||||| |||| ||| ||||    
T  20594176 atgagattgaacctggaaagattgtagaat-aaacttttggaaatctgacctgaactcgctacggcgagcagaggctctcgcctcgcgagtgacctagaa 20594078  T
Q  213 acagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    ||||| |||||||||||| |||||||| || ||| |||| ||||||    
T  20594077 acagagtgccttgttaggattttgcgatctgtgtcgcacaagttgt 20594032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 28496091 - 28496280
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||     
T  28496091 cagagagcatgtaagatttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtaga 28496190  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
    ||||||||  ||||||||||| |||||||||||||||||  | ||||||||||||||||||   |||| |||||||||||||||| ||||    
T  28496191 atgagattgaacctggaaagacttagaatgaaacttttgagaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 28496280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 26 - 257
Target Start/End: Original strand, 20360601 - 20360822
Alignment:
Q  26 aagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagac 125  Q
    ||||||||||| |||| ||| || | |||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||  ||    
T  20360601 aagatttcgtgtttttgacttttcagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 20360700  T
Q  126 ctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttg 225  Q
    ||||||          |||||||| ||| ||||||||||||||||||||   ||||  ||||||||||||||| |||| ||||||||||||| || ||||    
T  20360701 ctggaa----------tgaaacttgtgggattctgacctgaactcgccatggcgagctgaggctctcgcctcgcgagtgacccagaaacagagtgacttg 20360790  T
Q  226 ttaggttttgcgacctttgttgcacgagttgt 257  Q
    ||||||||||||||||||||||||||||||||    
T  20360791 ttaggttttgcgacctttgttgcacgagttgt 20360822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 29808501 - 29808691
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||     
T  29808501 cagagagcatgtaagatttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtaga 29808600  T
Q  114 atgagattagacctggaaaga--tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
    ||||||||  |||||||||||  |||||||||||||||| |||| ||||||||||||||||||   |||| |||||||||||||||| ||||    
T  29808601 atgagattgaacctggaaagatttttagaatgaaactttgggaa-tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 29808691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 29 - 258
Target Start/End: Original strand, 18821463 - 18821682
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||||||||| ||| |||| |||| |||||||||||||||||||||||||||||| ||||||| | ||||| ||||||||||||||||||  |||||    
T  18821463 atttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctg 18821562  T
Q  129 gaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtta 228  Q
    |||          |||||||| ||| ||||||||||||||||||||   |||| |||||||||||||||| |||  ||||||||||||| || |||||||    
T  18821563 gaa----------tgaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgtta 18821652  T
Q  229 ggttttgcgacctttgttgcacgagttgtc 258  Q
    | ||||||||||||||||||||||||||||    
T  18821653 gattttgcgacctttgttgcacgagttgtc 18821682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 16920263 - 16920490
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    |||||||||||||||||||||  |||| ||| |||| |||| ||||||||||||||||||||||||| |||||||||||| | ||| |||||||||||||    
T  16920263 agagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattagaaaagaatgtagga 16920362  T
Q  115 tgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaac 214  Q
    | |||||  |||||          |||| |||||| ||||||||||||||||||||||||   |||| |||||||||||||| | |||| ||||||||||    
T  16920363 taagattgtacctg----------gaattaaacttatggaattctgacctgaactcgccatggcgagcagaggctctcgccttgcgagtgacccagaaac 16920452  T
Q  215 agaatgccttgttaggttttgcgacctttgttgcacga 252  Q
    | | || |||||| | ||||||||||||||||||||||    
T  16920453 aaagtgacttgttggattttgcgacctttgttgcacga 16920490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 254
Target Start/End: Complemental strand, 18457202 - 18456977
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| ||||||||  |||||    
T  18457202 atttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 18457103  T
Q  129 gaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt- 227  Q
    ||   ||| ||||||||  ||||||||  |||||||||||| ||||   ||||||||||||||||||||| ||||| ||||   |||||| ||||||||     
T  18457102 gattaattaagaatgaactttttggaa-gctgacctgaactagccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaa-gccttgttc 18457005  T
Q  228 agg-ttttgcgacctttgttgcacgagt 254  Q
    ||| |||||||| |||||| ||||||||    
T  18457004 aggattttgcgatctttgtcgcacgagt 18456977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 21939886 - 21939703
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||| ||||||||||  |||||||||||||||||| ||||| | | ||||||||||||||||    
T  21939886 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcccttgagtgcctgaacatgtgtaatattgattaggaaagaatgtagg 21939787  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||   |||||||||| ||||||| ||||||| |  | ||||| ||||||||||||   |||| ||||||||||||||||    
T  21939786 atgagattgagcctggaaagacttagaataaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcg 21939703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 25611347 - 25611526
Alignment:
Q  20 gcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgaga 119  Q
    |||||||||||||||||||||| ||| |||| |||| |||||||||| ||||||||||||||||||||||||||| | |||||  ||||| || ||||||    
T  25611347 gcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcagcatgaga 25611446  T
Q  120 ttagacctggaaagatttagaatgaaac-ttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    || |||||||||||| ||||||||||||   || | ||||||||||||||||||||    ||| ||||||||||||||||    
T  25611447 ttggacctggaaagacttagaatgaaacaacttaggattctgacctgaactcgccatggagagcagaggctctcgcctcg 25611526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 1561806 - 1561622
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||| ||||     
T  1561806 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtaga 1561707  T
Q  114 atgagattagacctggaaagatttagaatg-aaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||||||| | |||||||| |||||||||  | ||||||| ||||| |||||  |||| | ||||||||||||||    
T  1561706 atgagattgaacctggaaaaacttagaatgaaaacttttgagaatctgacc-gaacttgccacggcgagcataggctctcgcctcg 1561622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 232
Target Start/End: Original strand, 4667831 - 4668049
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||  ||| |||| ||| ||||  ||| ||||||||||||||||||||||||||| |||||||||  | |||||||||||||||     
T  4667831 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 4667930  T
Q  114 atgagattagacctggaaaga-tttagaatgaaacttttggaattctg-acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccaga 211  Q
     ||||||| |||||||||||| |||||||||||  |||  |||  ||| ||||||||||||||   ||||||||||||||||||||| ||| ||||||      
T  4667931 gtgagattggacctggaaagagtttagaatgaatttttgtgaa--ctgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatt 4668028  T
Q  212 aacagaatgccttgttaggtt 232  Q
     ||||||||||||| ||||||    
T  4668029 tacagaatgccttgctaggtt 4668049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 232
Target Start/End: Complemental strand, 4189459 - 4189241
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||  ||| |||||||| ||||  ||| ||||||||||||||||||||||||||| |||||||||  | |||||||||||||||     
T  4189459 cagagagcatgcaagattctgtgttttttacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 4189360  T
Q  114 atgagattagacctggaaaga-tttagaatgaaacttttggaattctg-acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccaga 211  Q
     ||||||| |||||||||||| |||||||||||  |||  |||  ||| |||| |||||| ||   ||||||||||||||||||||| ||| ||||||      
T  4189359 gtgagattggacctggaaagagtttagaatgaatttttgtgaa--ctgaacctaaactcgtcatggcgagtagaggctctcgcctcgcgagctacccatt 4189262  T
Q  212 aacagaatgccttgttaggtt 232  Q
     ||||||||||||| ||||||    
T  4189261 tacagaatgccttgctaggtt 4189241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 25603003 - 25603192
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||| ||| | | || ||||||||||||||||||||||||||| | |||||  ||||| | |    
T  25603003 cagagagcatgcaagatttcgtgattttaacttttgagttgaacctgaaacgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcatg 25603102  T
Q  114 atgagattagacctggaaagatttagaatgaaac-ttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgag 202  Q
    |||||||| |||||||||||| ||||||||||||   || | |||||||| ||||||| |||   |||| ||||||||||||||||||||    
T  25603103 atgagattggacctggaaagacttagaatgaaacaacttaggattctgacttgaactcaccatggcgagcagaggctctcgcctcgtgag 25603192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 15 - 174
Target Start/End: Original strand, 15894049 - 15894209
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    |||||||||||||||||||||  |||| ||| |||| |||| |||||||||| ||||||||||||||||||||||||| | | |||||  ||||||| ||    
T  15894049 agagagcatgcaagatttcgtacttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaaga 15894148  T
Q  115 tgagattagacctggaaagatttagaatgaaa-cttttggaattctgacctgaactcgcca 174  Q
    ||||||| |||||||||||| |||||||||||    |||| ||||||||||||||||||||    
T  15894149 tgagattggacctggaaagacttagaatgaaagaacttgggattctgacctgaactcgcca 15894209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 257
Target Start/End: Original strand, 25628983 - 25629217
Alignment:
Q  24 gcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattag 123  Q
    |||||||||| ||||||| ||| || | |||| ||||||||| | || || |||| ||||| |||| |||| | ||||||| | ||||| ||||||||      
T  25628983 gcaagatttcatgattttgactttttagttgaaccttagatgttgttaagcgcctaaacatctctattaatgattaggaaatattgtagaatgagattga 25629082  T
Q  124 acctggaaagattt-agaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgcc 222  Q
    ||||||||| |||| ||||| |||||||||  ||| ||||||| |||||||    |||| |||||||||||||||| |||| ||||||||||||| ||||    
T  25629083 acctggaaatattttagaat-aaacttttgtgattatgacctgtactcgccgtggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgcc 25629181  T
Q  223 ttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    |||||||| ||||||||| |||||||||||||||||    
T  25629182 ttgttaggattttgcgacttttgttgcacgagttgt 25629217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 14 - 232
Target Start/End: Original strand, 4674678 - 4674896
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||  ||| |||| ||| ||||  ||| ||||||||||||||||||||||||||| |||||||||  | |||||||||||||||     
T  4674678 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 4674777  T
Q  114 atgagattagacctggaaaga-tttagaatgaaacttttggaattctg-acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccaga 211  Q
     ||||||| |||||||||||| |||||||||||  |||  |||  ||| |||| |||||| ||   ||||||||||||||||||||| ||| ||||||      
T  4674778 gtgagattggacctggaaagagtttagaatgaatttttgtgaa--ctgaaccttaactcgtcatggcgagtagaggctctcgcctcgcgagctacccatt 4674875  T
Q  212 aacagaatgccttgttaggtt 232  Q
     ||||||||||||| ||||||    
T  4674876 tacagaatgccttgctaggtt 4674896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 198
Target Start/End: Complemental strand, 19652685 - 19652514
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| |||||||||| ||| |||||||||||||||||||||||||||| | ||||||||| || || ||||||||  |||    
T  19652685 agatttcgtaattttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagaatgagattgaacc 19652586  T
Q  127 tggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    |||||||| |||||||||||  |||  ||||| | ||||||||||||||   |||||||||||||||||||||    
T  19652585 tggaaagactttagaatgaatttttgtgaattgt-acctgaactcgccatggcgagtagaggctctcgcctcg 19652514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 22831994 - 22831766
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| |||||||||||||||||||  ||||||||||||||| | | |||  |||||| ||||    
T  22831994 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgtttgaacatgtctaatattgattagtgaagaatatagg 22831895  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    | ||||||  ||||||||          | |||||  ||| ||||| |||||||||||||||  |||| |||||||||||||||| |||| ||| |||||    
T  22831894 acgagattgaacctggaa----------ttaaactgatgggattctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgaccgagaaa 22831805  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacga 252  Q
    |||| || |||||| | ||||||||||||||| ||||||    
T  22831804 cagagtgacttgttggattttgcgacctttgtcgcacga 22831766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 11185994 - 11185760
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||| ||||||||||   ||| | | |||| |||| |||||||||| |||||||||||||||||||| |||| | | |||  |||| ||||||    
T  11185994 cagagagcatgtaagatttcgtatatttgatttttgagttgaaccttagatgcctttgagtgcctgaacatgtcgaatattgattagtgaagagtgtagg 11185895  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    | ||||||  ||||||||          | |||||| ||| ||||| |||||||||||||||  |||| |||||| |||||||||||||| |||||||||    
T  11185894 acgagattgaacctggaa----------ttaaacttatgggattctaacctgaactcgccacggcgagcagaggccctcgcctcgtgagtgacccagaaa 11185805  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    || | || |||||||| ||||||||||||||||||| | ||||||    
T  11185804 catagtgacttgttagattttgcgacctttgttgcatgggttgtc 11185760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 22334500 - 22334632
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| | ||| ||| |||| |||| |||||||||| ||||||||||||||||||||||||| | | |||||  ||||||| |    
T  22334500 cagagagcatgcaagatttcgtaaatttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaag 22334599  T
Q  114 atgagattagacctggaaagatttagaatgaaa 146  Q
    |||||||| |||||||||| | |||||||||||    
T  22334600 atgagattggacctggaaatacttagaatgaaa 22334632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 232
Target Start/End: Original strand, 4185441 - 4185659
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||  ||| |||| ||| ||||  ||| |||||||||||||||||||| |||||| |||||||||  | || ||||||||||||     
T  4185441 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcatgaacaagtctaataacgattatgaaagaatgtaga 4185540  T
Q  114 atgagattagacctggaaaga-tttagaatgaaacttttggaattctg-acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccaga 211  Q
     |||||||  ||||||||||| |||||||||||  |||  |||  ||| ||||||||||||||   ||||||||||||||||||||| ||| ||||||      
T  4185541 gtgagattgaacctggaaagagtttagaatgaatttttgtgaa--ctgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatt 4185638  T
Q  212 aacagaatgccttgttaggtt 232  Q
     | ||||||||||| ||||||    
T  4185639 tatagaatgccttgctaggtt 4185659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 31155016 - 31155137
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||  ||  |||| ||| ||||  ||| ||||||||||||||||||||||||| | |||||||||  | | |||||||||||||     
T  31155016 cagagagcatgcaagattctgtttttttgacttttgagatgacccttagatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtaga 31155115  T
Q  114 atgagattagacctggaaagat 135  Q
    ||||||||  ||||||||||||    
T  31155116 atgagattgaacctggaaagat 31155137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 232
Target Start/End: Original strand, 27332940 - 27333120
Alignment:
Q  52 ttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaaga-tttagaatgaaacttt 150  Q
    |||| ||||||||||||||||||| |||||||||| |||| || | ||||||||| | ||| ||||| ||  ||||||||||| ||||||||| || |||    
T  27332940 ttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattttagaatg-aagttt 27333038  T
Q  151 tggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggtt 232  Q
    ||  | |   ||||||||||||||   ||||||||||||||||||||| ||  | ||||   ||||||||| ||||||||||    
T  27333039 tgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgaactgcccaattacagaatgctttgttaggtt 27333120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 232
Target Start/End: Original strand, 27393680 - 27393860
Alignment:
Q  52 ttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaaga-tttagaatgaaacttt 150  Q
    |||| ||||||||||||||||||| |||||||||| |||| || | ||||||||| | ||| ||||| ||  ||||||||||| ||||||||| || |||    
T  27393680 ttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattttagaatg-aagttt 27393778  T
Q  151 tggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggtt 232  Q
    ||  | |   ||||||||||||||   ||||||||||||||||||||| ||  | ||||   ||||||||| ||||||||||    
T  27393779 tgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgaactgcccaattacagaatgctttgttaggtt 27393860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 22439302 - 22439230
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgt 86  Q
    ||||||||||||||||||| || ||||| ||| |||| |||| ||||||||| ||||||||||||||| ||||    
T  22439302 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgt 22439230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 31164473 - 31164589
Alignment:
Q  11 gagcagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgt 110  Q
    |||||||||||||||||||||| |  ||||| ||  |||| ||||| ||| ||||   ||||||||||||||||  ||| |||| | |||||| ||||||    
T  31164473 gagcagagagcatgcaagattttgcaattttgacatttgagttgatacttggatgtccttgagtgcctgaacatacctagtaatgattaggaatgaatgt 31164572  T
Q  111 aggatgagattagacct 127  Q
    ||||||||||| |||||    
T  31164573 aggatgagattggacct 31164589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 27415572 - 27415632
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||||||||||||| ||| |||| |||| |||||||||  |||||||    
T  27415572 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtctttgagt 27415632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 19863480 - 19863413
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaa 81  Q
    ||||||||||| ||||||||||  |||| ||| |||| |||| ||||||||| |||||||||||||||    
T  19863480 cagagagcatgtaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 19863413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 131
Target Start/End: Complemental strand, 23019872 - 23019793
Alignment:
Q  52 ttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaa 131  Q
    |||| |||||||||||||||||||||||||||||| | ||||| | ||||||||| | |||  |||||||  ||||||||    
T  23019872 ttgaaccttagatgcttttgagtgcctgaacatgtgtgataatgattaggaaagattttagattgagattgaacctggaa 23019793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 22432752 - 22432680
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgt 86  Q
    ||||||||||||||||||| ||  |||| ||| |||| |||| ||||||||| |||||||||| |||| ||||    
T  22432752 cagagagcatgcaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcatgaagatgt 22432680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 22080393 - 22080435
Alignment:
Q  52 ttgatccttagatgcttttgagtgcctgaacatgtctaataat 94  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||    
T  22080393 ttgaaccttagatgtttttgagtgactgaacatgtctaataat 22080435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 18180974 - 18180925
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcct 78  Q
    ||||||||||||| ||| |||| |||| ||||||||| ||||||||||||    
T  18180974 atttcgtgattttgacttttgagttgaaccttagatgtttttgagtgcct 18180925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 19668728 - 19668632
Alignment:
Q  162 cctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggtt--ttgcgacctttgttgcacgagttg 256  Q
    ||||||||||||| | ||||||||||||||||||||| ||| |  |||   ||||||  ||||||||||||   || ||||||||| ||||||||||    
T  19668728 cctgaactcgccatagcgagtagaggctctcgcctcgcgagctgtccaattacagaacaccttgttaggttaaatgtgacctttgtcgcacgagttg 19668632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 25641802 - 25641874
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgt 86  Q
    ||||||||||| ||||||| ||  |||  ||| |||| |||| ||||||||| ||||||||||||||| ||||    
T  25641802 cagagagcatgtaagattttgtagtttggacttttgagttgaaccttagatgtttttgagtgcctgaagatgt 25641874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 256
Target Start/End: Complemental strand, 25644674 - 25644582
Alignment:
Q  165 gaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttagg-ttttgcgacctttgttgcacgagttg 256  Q
    |||||||||| | ||||||||||| ||||||||| ||||| ||| |   |||||||| |  ||||| |||||||| |||||| ||||||||||    
T  25644674 gaactcgccatagcgagtagaggccctcgcctcgcgagttgcccggtttcagaatgcttgtttaggtttttgcgatctttgtcgcacgagttg 25644582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 44053332 - 44053087
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||| ||||||| ||| |||| |||||||||||||||||||||||| |||||||||||||||||| | | ||||||||||||||    
T  44053332 cagagagcatgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctaataatgattgggaaagaatgtagg 44053233  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||| ||||||| ||| ||||||||| ||| |||||||||||||||||||||  |||| |||| ||||||||||| |||| ||||||||    
T  44053232 atgagattgaacctgtaaagattataggatgaaacttgtgggattctgacctgaactcgccacggcgagcagagactctcgcctcgcgagtgacccagaa 44053133  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  44053132 acagagtgccttgttagattttgcgacctttgttgcacgagttgtc 44053087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 7799200 - 7798956
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||  ||| |||||||||||||||||||||||||||||||||| |||||||| | ||||| | ||||||||    
T  7799200 cagagagcatgcaagatttcgtgattttgacttctgagttgatccttagatgcttttgagtgcctgaacatgactaataatgattaggacataatgtagg 7799101  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  |||||||||| || ||||||||||||| | | |||||||||||||||||||||  |||| |||||||||||||||| |||| ||||||||    
T  7799100 atgagattgaacctggaaagtttgtagaatgaaacttgtagtattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 7799001  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    ||| | || ||||||||||||||||||||||||| ||||||||||    
T  7799000 acaaagtgtcttgttaggttttgcgacctttgtttcacgagttgt 7798956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 22636937 - 22636693
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||| |||  ||| |||||||||||||||||||||||| ||||| |||||||||||| | ||||||||||||||||    
T  22636937 cagagagcatgcaagattttgtgattttgacttctgagttgatccttagatgcttttgagtgtctgaagatgtctaataatgattaggaaagaatgtagg 22636838  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||| ||| ||||||||||||| ||| |||||||| ||| ||||||||  |||| |||||||||||||||  |||| ||||||||    
T  22636837 atgagattgaacctggaaaaattgtagaatgaaacttgtgggattctgacttgacctcgccacggcgagcagaggctctcgcctcacgagtgacccagaa 22636738  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    ||||| || ||||||||||||||||||||||||||||||||||||    
T  22636737 acagagtgtcttgttaggttttgcgacctttgttgcacgagttgt 22636693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 15 - 256
Target Start/End: Complemental strand, 14039151 - 14038908
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||| ||||||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||| |    
T  14039151 agagagcttgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgatttggaaagaatgtagaa 14039052  T
Q  115 tgagattagacctggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    |||||||  |||| |||||| ||||||||||||||||||||| ||||||| |||||||||||  |||| |||||||||||||||| |||| |||||||||    
T  14039051 tgagattgaacctagaaagattttagaatgaaacttttggaaatctgaccagaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 14038952  T
Q  214 cagaatgccttgttagg-ttttgcgacctttgttgcacgagttg 256  Q
    |||| |||||||||||| |||||||| || ||| |||| |||||    
T  14038951 cagagtgccttgttaggattttgcgatctgtgtcgcacaagttg 14038908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 14 - 255
Target Start/End: Complemental strand, 15091400 - 15091157
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| ||| |||| |||||| ||||||||||||||||  |||||||||||||||| | | |||||||||||||||     
T  15091400 cagagagcttgcaagatttcgtgattttgacttttgagttgatctttagatgcttttgagtttctgaacatgtctaatattgattaggaaagaatgtaga 15091301  T
Q  114 atgagattagacctggaaagattt-agaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  |||||||| ||||| |||||||||||||||||| |||||||||||||||||||  |||| |||||||||||||||| |||| ||||||||    
T  15091300 atgagattgaacctggaaggattttagaatgaaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 15091201  T
Q  213 acagaatgccttgttagg-ttttgcgacctttgttgcacgagtt 255  Q
    ||||| |||||||||||| |||||||| || ||| |||| ||||    
T  15091200 acagagtgccttgttaggattttgcgatctgtgtcgcacaagtt 15091157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 253
Target Start/End: Complemental strand, 12903248 - 12903020
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||| ||| |||| |||| ||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||    
T  12903248 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttt-gagtgcctgaacatgtctaataatgattaggaaagaatgtagg 12903150  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  ||||||||          |||||||| ||| |||||||||||||||||||||  ||||||||||||| ||||||| |||| |||||||||    
T  12903149 atgagattgaacctggaa----------tgaaacttgtgggattctgacctgaactcgccacggcgagtagaggctcccgcctcgcgagtgacccagaaa 12903060  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgag 253  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  12903059 cagagtgccttgttagattttgcgacctttgttgcacgag 12903020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 14 - 255
Target Start/End: Original strand, 16377140 - 16377382
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||| ||| ||||||||||| ||||||| ||| |||| |||||||||||||||||||||| | |||||||||||||||||| | ||||||| ||||||||    
T  16377140 cagatagcttgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagcgtctgaacatgtctaataatgattaggaaataatgtagg 16377239  T
Q  114 atgagattagacctggaaagat-ttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  |||||||| |||  ||||||| ||||||||| | |||||||||||||||||||  |||| |||||||||||||||  |||| ||||||||    
T  16377240 atgagattgaacctggaatgatcgtagaatg-aacttttgggaatctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaa 16377338  T
Q  213 acagaatgccttgttagg-ttttgcgacctttgttgcacgagtt 255  Q
    ||| | |||||||||||| |||||| ||||||||||||||||||    
T  16377339 acatagtgccttgttaggattttgctacctttgttgcacgagtt 16377382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 3097135 - 3096901
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||| | ||||| ||| |||| || | ||||||||| ||| |||||||||||||||||||||||| | ||||||||||||||||    
T  3097135 cagagagcatgcaagatttcataattttgacttttgagttaaaccttagatgttttcgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 3097036  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  ||||||||          |||||||| ||| ||||||||||||||||||||   |||| |||||||||||||||| |||| |||||||||    
T  3097035 atgagattgaacctggaa----------tgaaacttgtgggattctgacctgaactcgccaaggcgagcagaggctctcgcctcgcgagtgacccagaaa 3096946  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || |||||||| ||||||||||||||||||||||||||||    
T  3096945 cagagtgacttgttagattttgcgacctttgttgcacgagttgtc 3096901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 17 - 258
Target Start/End: Complemental strand, 7089366 - 7089135
Alignment:
Q  17 agagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatg 116  Q
    ||||||||||||||||||| ||||| ||| |||| |||| |||||||||| | ||||||||||||||||||||||||| | |||||||||||||||||||    
T  7089366 agagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcctatgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatg 7089267  T
Q  117 agattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacag 216  Q
    |||||  |||||          ||||||||||| ||| ||||||||||||||||||||   |||| |||||||||||||||| |||| |||| |||||||    
T  7089266 agattgaacctg----------gaatgaaacttatgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccggaaacag 7089177  T
Q  217 aatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    | || |||||||| ||||||||||||||||||| ||||||||    
T  7089176 agtgtcttgttagattttgcgacctttgttgcaagagttgtc 7089135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 15 - 254
Target Start/End: Original strand, 44928542 - 44928782
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||| ||||||||| ||||||||| ||| |||| |||||||||| ||| |||||||||||||||||| ||||||||| | ||||||||||||||| |    
T  44928542 agagagcttgcaagattccgtgattttgacttttgagttgatccttatatgtttttgagtgcctgaacatatctaataatgattaggaaagaatgtagaa 44928641  T
Q  115 tgagattagacctggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    |||||||  ||||||||||| |||||||||||||||| |||| ||||||| ||||||||||   |||| |||||||||||||||| |||| ||||||  |    
T  44928642 tgagattgaacctggaaagattttagaatgaaactttgggaa-tctgaccagaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagtta 44928740  T
Q  214 cagaatgccttgttagg-ttttgcgacctttgttgcacgagt 254  Q
    |||||||| |  ||||| |||||||| |||||| ||||||||    
T  44928741 cagaatgcttgtttaggattttgcgatctttgtcgcacgagt 44928782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 14052932 - 14053165
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||| |||  |||| ||| |||| |||| ||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||    
T  14052932 cagagagcatgcaagatt-cgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagg 14053030  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  ||          || |||| |||||| ||| |||||||||||||||| |||   |||| |||||||||||||| | |||| |||||||||    
T  14053031 atgagattgaac----------ttggaattaaacttgtgggattctgacctgaactcaccatggcgagcagaggctctcgccttgcgagtgacccagaaa 14053120  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || |||||||| ||||||||||||||||||||||||||||    
T  14053121 cagagtgacttgttagattttgcgacctttgttgcacgagttgtc 14053165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 14 - 173
Target Start/End: Original strand, 16239610 - 16239769
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaag-aatgtag 112  Q
    |||||||||||||||||||||| ||||| ||| |||| ||| ||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||    
T  16239610 cagagagcatgcaagatttcgtaattttgacttttgagttgctccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaatgtag 16239709  T
Q  113 gatgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgcc 173  Q
     ||||||||  |||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  16239710 aatgagattgaacctggaaagatttagaatgaaacttgtgg-attctaacctgaactcgcc 16239769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 15552316 - 15552133
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| ||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  15552316 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 15552217  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    |||||||| |||||||||||| ||||||| ||| ||| |  | ||||||| |||||||||||  |||| |||||||| |||||||    
T  15552216 atgagattggacctggaaagacttagaatcaaaatttggagaatctgacc-gaactcgccacggcgagcagaggctcgcgcctcg 15552133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 24029244 - 24029061
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||| |||||||||  ||||||||||||||||||||||||| | | || |||||||||||||    
T  24029244 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtctttgagtgcctgaacatgtctaatattgattatgaaagaatgtagg 24029145  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||||||||| ||||||||||||||| |  | ||||| ||||||||||||   |||| ||||||||||||||||    
T  24029144 atgagattgaacctggaaagacttagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcg 24029061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 13812427 - 13812610
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||| |||||||||| |||||||| |||||||||||||||| | | ||||||| ||||||||    
T  13812427 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgtctgaacatgtctaatattgattaggaaataatgtagg 13812526  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||||||||| ||||||||||||||| |  | ||||| || |||||||||   |||| ||||||||||||||||    
T  13812527 atgagattgaacctggaaagacttagaatgaaactttggagaatctga-ctaaactcgccatggcgagcagaggctctcgcctcg 13812610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 20156908 - 20157044
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| || |||||||||||| ||||||||||||||||||||||||| | | ||||||||||||||||    
T  20156908 cagagagcatgcaagatttcgtgattttgacttttgagttaatccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 20157007  T
Q  114 atgagattagacctggaaagatttagaatgaaacttt 150  Q
    ||||||||  ||||||||||  |||||||||||||||    
T  20157008 atgagattgaacctggaaaggcttagaatgaaacttt 20157044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 22633831 - 22633967
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||| | ||||||||  |||||||||||||||||||||||| | | ||||||||||||||||    
T  22633831 cagagagcatgcaagatttcgtgattttgacttttgagttgaactttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 22633930  T
Q  114 atgagattagacctggaaagatttagaatgaaacttt 150  Q
    ||||||||  ||||||||||| |||||||||||||||    
T  22633931 atgagattgaacctggaaagacttagaatgaaacttt 22633967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 195
Target Start/End: Complemental strand, 16597148 - 16596968
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||  || ||||| | | |||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||     
T  16597148 cagagagcatgcaagattctgtaattttgatttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 16597049  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcc 195  Q
    ||||||||  ||||||||||| ||||||||||| ||| |  | ||||||| ||||||||||   |||||||||| |||||||    
T  16597048 atgagattgaacctggaaagacttagaatgaaaatttagagaatctgacc-gaactcgccatggcgagtagaggttctcgcc 16596968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 38 - 257
Target Start/End: Original strand, 17047726 - 17047934
Alignment:
Q  38 tttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaagattt 137  Q
    |||| ||| |||| |||| |||||||||  |||||||||||||||||| |||||||| | ||||||| |||||||||||||||| || ||||||          
T  17047726 ttttgacttttgagttgaaccttagatgtctttgagtgcctgaacatgactaataatgattaggaaaaaatgtaggatgagatt-gaactggaa------ 17047818  T
Q  138 agaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggttttgcg 237  Q
        |||||||| ||| ||||||||||||||||||||   |||| |||||||||||||||| |||| |||| |||||||| |||||||| ||  ||||||    
T  17047819 ----tgaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccggaaacagagtgccttgtgagactttgcg 17047914  T
Q  238 acctttgttgcacgagttgt 257  Q
    ||||||||||||||||||||    
T  17047915 acctttgttgcacgagttgt 17047934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 6190921 - 6190783
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||||||||||||||  |||||    
T  6190921 atttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctg 6190822  T
Q  129 gaaagatt-tagaatgaaacttttggaattctgacctga 166  Q
    |||||||| ||||||||||||| ||| ||| ||||||||    
T  6190821 gaaagattgtagaatgaaacttgtgggattttgacctga 6190783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 203
Target Start/End: Complemental strand, 44102697 - 44102524
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||||||||||| ||||| ||||||| | || | |||||||||||||||||||  |||||    
T  44102697 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgagcatgtttaataatgattatg-aagaatgtaggatgagattgaacctg 44102599  T
Q  129 gaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
    || ||| |||||||| |||||||  ||| ||||||||||||||||||   |||| |||||||||||||||| ||||    
T  44102598 gatagattttagaataaaactttgagaa-tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 44102524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 29 - 209
Target Start/End: Original strand, 21814936 - 21815115
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||||| ||||||| | ||||||||||| ||| |||| | |  |||||    
T  21814936 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctg 21815035  T
Q  129 gaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttaccca 209  Q
    ||   ||| ||||||||  ||||||||  ||||| |||||||||||   ||||||||||||||||||||| ||||| ||||    
T  21815036 gattaattaagaatgaactttttggaa-gctgacttgaactcgccatggcgagtagaggctctcgcctcgcgagttgccca 21815115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 29 - 209
Target Start/End: Original strand, 21815265 - 21815444
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||||| ||||||| | ||||||| ||| ||| |||| | |  |||||    
T  21815265 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaataatttagaatgataatgaacctg 21815364  T
Q  129 gaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttaccca 209  Q
    ||   ||| ||||||||  ||||||||  |||||||||||||||||   ||||||||||||||||||||| ||||| ||||    
T  21815365 gattaattaagaatgaactttttggaa-gctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagttgccca 21815444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 29 - 209
Target Start/End: Original strand, 21818358 - 21818537
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||||| ||||||| | ||||||||||| ||| |||| | |  |||||    
T  21818358 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctg 21818457  T
Q  129 gaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttaccca 209  Q
    ||   ||| ||||||||  ||||||||  ||||| |||||||||||   ||||||||||||||||||||| ||||| ||||    
T  21818458 gattaattaagaatgaactttttggaa-gctgacttgaactcgccatggcgagtagaggctctcgcctcgcgagttgccca 21818537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 7894077 - 7893960
Alignment:
Q  140 aatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttagg-ttttgcga 238  Q
    |||||||||| ||| |||||||||||||||||||||  |||| |||||||||||||||  |||| |||||||||||||  | ||||||||| ||||||||    
T  7894077 aatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagagtcttgttaggtttttgcga 7893978  T
Q  239 cctttgttgcacgagttg 256  Q
    ||||||||||| ||||||    
T  7893977 cctttgttgcatgagttg 7893960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 227
Target Start/End: Complemental strand, 8846865 - 8846664
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| ||||| |||||||| |||||||| ||||||||||||||||||| | ||||||||| || || ||||||||  |||    
T  8846865 agatttcgtaattttgacttttgagttgattcttagatgtttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 8846766  T
Q  127 tggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttg 225  Q
    |||||||| |||||||||||  |||||  | |   |||| |||||||||   ||||||||||||||||||||| ||| || | ||  |||||||| ||||    
T  8846765 tggaaagattttagaatgaattttttgtgagttgcaccttaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgtcttg 8846666  T
Q  226 tt 227  Q
    ||    
T  8846665 tt 8846664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 23374125 - 23374221
Alignment:
Q  161 acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    |||||||||||||||  |||| |||||||||||||||| | || ||||||||||||| || |||||||| |||||| ||||||||||||||||||||    
T  23374125 acctgaactcgccacggcgagcagaggctctcgcctcgcgggtgacccagaaacagagtgacttgttagattttgcaacctttgttgcacgagttgt 23374221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 12774488 - 12774313
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| |||||||||||||| |||||||||||||||||||||||||||| | ||| ||||| || || ||||||||  |||    
T  12774488 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattagaaaagattggagaatgagattgaacc 12774389  T
Q  127 tggaaaga-tttagaatgaaacttttg-gaattctg-acctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
    |||| |||  ||||||||||  ||||| |||  ||| ||||||||||||||   |||| |||||||||||||||| ||||    
T  12774388 tggagagacgttagaatgaa--ttttgtgaa--ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 12774313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 254
Target Start/End: Original strand, 52242856 - 52243052
Alignment:
Q  59 ttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaa-agatttagaatgaaacttttggaatt 157  Q
    ||||||| ||| |||||||||||||||| ||||||| |  |||||||| | ||| ||||||||  |||||||| || || |||||| |   || ||| ||    
T  52242856 ttagatgatttcgagtgcctgaacatgtataataatgatcaggaaagattctagaatgagattgaacctggaatagtttaagaatgcattgttgggagtt 52242955  T
Q  158 ctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttagg-ttttgcgacctttgttgcacgagt 254  Q
       |||||||||||||| | ||||||||||||||||||||| ||||| |||||  ||||||||| |  ||||| |||||||| |||||| ||||||||    
T  52242956 ac-acctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagt 52243052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 257
Target Start/End: Original strand, 16239764 - 16239832
Alignment:
Q  190 ctcgcctcgtgagttacccagaaacagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    ||||||||| |||| ||||||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  16239764 ctcgcctcgcgagtgacccagaaacagagtgacttgttaggtttttgcgacctttgttgcacgagttgt 16239832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 17046765 - 17046718
Alignment:
Q  68 tttgagtgcctgaacatgtctaataataactaggaaagaatgtaggat 115  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  17046765 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 17046718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 39705944 - 39705998
Alignment:
Q  52 ttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaaga 106  Q
    |||| ||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  39705944 ttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 39705998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 227
Target Start/End: Complemental strand, 15099810 - 15099640
Alignment:
Q  57 ccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaa-agatttagaatgaaacttttggaa 155  Q
    ||||||||| |||||||||||||||| ||| | || || | ||||||||| |||||  |||||||  |||||||| || || ||||||||  |||  ||     
T  15099810 ccttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctggaatagtttaagaatgaatttttgtgag 15099711  T
Q  156 ttctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt 227  Q
    ||   ||||||||||||||   ||||||||||||||||||||| ||| || ||||  |||||||| ||||||    
T  15099710 ttgc-acctgaactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgtcttgtt 15099640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 15464694 - 15464760
Alignment:
Q  161 acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt 227  Q
    |||||||||| ||| | ||||||||||||||||||||| ||||| |||||  |||||||| ||||||    
T  15464694 acctgaactcaccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgacttgtt 15464760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 43198249 - 43198298
Alignment:
Q  57 ccttagatgcttttgagtgcctgaacatgtctaataataactaggaaaga 106  Q
    ||||||||| |||||||||||||||||||| ||||||| | |||||||||    
T  43198249 ccttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaaga 43198298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 3332287 - 3332205
Alignment:
Q  115 tgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    |||||||  ||||||||||| ||||||||||||||| |  | ||||| ||||||||||||   |||| ||||||||||||||||    
T  3332287 tgagattgaacctggaaagacttagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcg 3332205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 13845028 - 13844965
Alignment:
Q  28 gatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaat 91  Q
    |||||||| ||||| ||| || | |||| ||||||||| ||||||||| |||||||||||||||    
T  13845028 gatttcgtaattttgacttttaagttgaaccttagatgtttttgagtgtctgaacatgtctaat 13844965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 258
Target Start/End: Complemental strand, 6190778 - 6190720
Alignment:
Q  200 gagttacccagaaacagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| ||||| ||| ||| || |||||||| ||||||||||||||||||||||| ||||    
T  6190778 gagtgacccaaaaatagagtgacttgttagattttgcgacctttgttgcacgagctgtc 6190720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 91
Target Start/End: Complemental strand, 15190777 - 15190743
Alignment:
Q  57 ccttagatgcttttgagtgcctgaacatgtctaat 91  Q
    ||||||||| |||||||||||||||||||||||||    
T  15190777 ccttagatgtttttgagtgcctgaacatgtctaat 15190743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 15190656 - 15190607
Alignment:
Q  178 cgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt 227  Q
    ||||||||||||||||||||| ||| || ||||  |||||||||||||||    
T  15190656 cgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtt 15190607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 15868291 - 15868344
Alignment:
Q  52 ttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaag 105  Q
    |||| ||||||||| ||||||||||||||| |||| ||||||| | ||||||||    
T  15868291 ttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggaaag 15868344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 3332321 - 3332285
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattga 50  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  3332321 cagagagcatgcaagatttcgtgattttgacttttga 3332285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 149; Significance: 8e-79; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 3973 - 3729
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||||| ||||||||||||||||| |||||||||||||||||| | ||||||||||||||||    
T  3973 cagagagcatgcaagatttcgtgattttgacttttgagttgatctttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtagg 3874  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  |||||||| |||| |||||| |||||| ||| |||||||||||||||||||||  |||| |||||||||||||||| |||| ||||| ||    
T  3873 atgagattgaacctggaatgattgtagaatcaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccaaaa 3774  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    ||||| ||  |||||||||||||||||||||||||||||||||||    
T  3773 acagagtgagttgttaggttttgcgacctttgttgcacgagttgt 3729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 26 - 257
Target Start/End: Complemental strand, 833 - 601
Alignment:
Q  26 aagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagac 125  Q
    |||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| ||||||||  ||    
T  833 aagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaac 734  T
Q  126 ctggaaag-atttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgcctt 224  Q
    || ||||| |||||||||||||||||||||| ||||| ||||||||||| |  ||||||||||||||||||||| |||| ||||||||||||| || |||    
T  733 ctagaaagaatttagaatgaaacttttggaa-tctgaactgaactcgccgcggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtctt 635  T
Q  225 gttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    |||||| |||||| |||||||||||| |||||||    
T  634 gttaggtttttgcaacctttgttgcatgagttgt 601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 149; Significance: 8e-79; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 15 - 258
Target Start/End: Complemental strand, 2353 - 2109
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  2353 agagagcatccaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 2254  T
Q  115 tgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    |||||||  ||||||||||||| ||||||||||||| ||| ||||||||||||||||||||   |||||||||||| |||||||  |||| ||||  |||    
T  2253 tgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccctaaaa 2154  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||||    
T  2153 cagagtgccttgttagattttgtgacctttgttgcacgagttgtc 2109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 198
Target Start/End: Original strand, 207161 - 207320
Alignment:
Q  38 tttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaagattt 137  Q
    |||| ||| |||| |||| |||||||||| ||||||||||||||||||||||||| | | ||||| ||||||||||||||||||  ||||||||||| ||    
T  207161 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagagaatgtaggatgagattgaacctggaaagactt 207260  T
Q  138 agaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||||||| |  | ||||| ||||||||||||   |||| ||||||||||||||||    
T  207261 agaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcg 207320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 148; Significance: 3e-78; HSPs: 5)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 125085 - 124843
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  125085 cagagagcatgcaagatttggtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 124986  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    |||||     ||||||||||||| ||||||||||||| ||| |||||||||||||||||||||  |||| |||||||||||||||| |||| ||||||||    
T  124985 atgagga---acctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 124889  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    | ||| || |||||||| ||||||||||||||||||||||||||||    
T  124888 aaagagtgtcttgttagattttgcgacctttgttgcacgagttgtc 124843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 63051 - 62932
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| | ||| ||| |||| |||||||||||||| |||||||||| ||||||||||||||||| | ||||||||| || || ||||||||  |||    
T  63051 agatttcgtaaatttgacttttgagttgatccttagatgtttttgagtgcatgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 62952  T
Q  127 tggaaaga-tttagaatgaa 145  Q
    |||||| | |||||||||||    
T  62951 tggaaatattttagaatgaa 62932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 175267 - 175202
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctg 79  Q
    |||||||||||||||||||||| ||||| ||| |||| |||| ||||||||| |||||||||||||    
T  175267 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctg 175202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 136132 - 136174
Alignment:
Q  162 cctgaactcgccacaacgagtagaggctctcgcctcgtgagtt 204  Q
    ||||||||||||| | ||||||||||||||||||||| |||||    
T  136132 cctgaactcgccatagcgagtagaggctctcgcctcgcgagtt 136174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 144840 - 144882
Alignment:
Q  162 cctgaactcgccacaacgagtagaggctctcgcctcgtgagtt 204  Q
    ||||||||||||| | ||||||||||||||||||||| |||||    
T  144840 cctgaactcgccatagcgagtagaggctctcgcctcgcgagtt 144882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 255
Target Start/End: Original strand, 5739 - 5981
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||    
T  5739 cagagagcatgcaagatttcgtgttttttacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtagg 5838  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  |||||| |||||| | |||||||| ||  || ||||||||||||||| |||||  |||| ||||||||||||||||| ||| ||||||||    
T  5839 atgagattgaacctgggaagattattgaatgaaatttgcgggattctgacctgaacttgccacggcgagcagaggctctcgcctcgttagtgacccagaa 5938  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagtt 255  Q
    ||||| ||||||||||| |||||||||||||||||||||||||    
T  5939 acagagtgccttgttagattttgcgacctttgttgcacgagtt 5981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 8978 - 8734
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||| ||| |||| |||||||||||||||||||||||||||||| |||||||||| | | ||||||||||||||||    
T  8978 cagagagcatgcaagattttgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaatatgtctaatagtgattaggaaagaatgtagg 8879  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  |||| |||||||| || |||| ||||| ||| |||||||||||||||||||||  | ||||||||||||||||||| || | ||||||||    
T  8878 atgagattgaacctagaaagattgtaaaatggaacttgtgggattctgacctgaactcgccacggccagtagaggctctcgcctcgcgaatgacccagaa 8779  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    ||||| || ||||||||||||||||||||||||||||||||||||    
T  8778 acagagtgtcttgttaggttttgcgacctttgttgcacgagttgt 8734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 39262 - 39019
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||| ||| |  | ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||     
T  39262 cagagagcatgcaagatttcgtaattttgactttgaagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 39163  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||||||||||| ||||||||||| ||| |||||||||||||||||||||  |||| |||||||||||||||| |||| |||||||||    
T  39162 atgagattgaacctggaaagattttgaatgaaacttgtgg-attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 39064  T
Q  214 cagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    || | || ||||||||| |||||||||||||||||||||||||||    
T  39063 catagtgacttgttaggtttttgcgacctttgttgcacgagttgt 39019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 40414 - 40171
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| || |||| | |||||| |||||||||    
T  40414 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaggaatgtagg 40315  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  |||| || ||||| ||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||| |||| ||||||||    
T  40314 atgagattgaacct-gacagattgtagaatg-aacttttggaaatctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 40217  T
Q  213 acagaatgccttgttaggt-tttgcgacctttgttgcacgagttgt 257  Q
    ||||| | ||||||||||| ||||||||||||||||||||||||||    
T  40216 acagagtaccttgttaggtgtttgcgacctttgttgcacgagttgt 40171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 19649 - 19719
Alignment:
Q  162 cctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggtt 232  Q
    ||||||||||||| |  |||||||||||||||||||||||||| |||||  ||||||  ||||||||||||    
T  19649 cctgaactcgccatagggagtagaggctctcgcctcgtgagttgcccagttacagaacaccttgttaggtt 19719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 15 - 256
Target Start/End: Original strand, 25684 - 25926
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||| ||||||||||| || |||| ||| |||| |||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||    
T  25684 agagagcttgcaagatttcatgtttttgacttttgagttgatccttagatggttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 25783  T
Q  115 tgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    |||||||  ||||| ||||||| ||||||| || |||||||| |||||||||||||||||||  |||| |||||||||||||||| |||| |||||||||    
T  25784 tgagattgaacctgaaaagattgtagaatg-aatttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 25882  T
Q  214 cagaatgccttgttagg-ttttgcgacctttgttgcacgagttg 256  Q
    |||| |||||||||||| ||||||||||||||||||||||||||    
T  25883 cagagtgccttgttaggattttgcgacctttgttgcacgagttg 25926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 238
Target Start/End: Original strand, 33112 - 33338
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| ||| |||| ||||||||||||||||| |||||||||| |||||||||||||| | ||||||||||||||||    
T  33112 cagagagcttgcaagatttcgtgattttcacttttgagttgatccttagatgcttctgagtgcctggacatgtctaataatgattaggaaagaatgtagg 33211  T
Q  114 atgagattagacctggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||| ||||||||||||||||||||| ||| |||||||||||||||  |||| | |||||||||||||| | || ||||||||    
T  33212 atgagattgaacctggaaagattttagaatgaaacttttggaagtcttacctgaactcgccacggcgagcaaaggctctcgcctcgcgtgtgacccagaa 33311  T
Q  213 acagaatgccttgttagg-ttttgcga 238  Q
    ||||| |||||||| ||| ||||||||    
T  33312 acagagtgccttgtcaggattttgcga 33338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 339569 - 339809
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||  ||||||||||| | |||||| |||||||||    
T  339569 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttaaatgcttttgagtgcctgaatttgtctaataatgattaggaatgaatgtagg 339668  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||||| ||||||| ||||||||| | |||||| ||||||||||||  |||| |||||||||||||||| |||| ||||||||    
T  339669 atgagattgaacctggaaagattgtagaatg-aacttttgggaatctgacatgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 339767  T
Q  213 acagaatgccttgttaggttttgcgacctttgttgcacgagt 254  Q
    | ||| ||||||||||||||||||||||||||||||||||||    
T  339768 atagagtgccttgttaggttttgcgacctttgttgcacgagt 339809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 71789 - 71729
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||||||||||||| ||| |||| |||| |||||||||  |||||||    
T  71789 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtctttgagt 71729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 14 - 204
Target Start/End: Complemental strand, 20615 - 20425
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||  ||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||     
T  20615 cagagagcatgcaagatttcgtgattttgacttctgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 20516  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagtt 204  Q
    || |||||  ||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||| |||||    
T  20515 ataagattgaacctggaaagatttagaatgaaacttttggagttctgacctgagctcgccacgacgagcagaggctctcgcctcgcgagtt 20425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 131; Significance: 5e-68; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 29 - 258
Target Start/End: Original strand, 51517 - 51747
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||||||||||||||  |||||    
T  51517 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctg 51616  T
Q  129 gaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt 227  Q
    |||||||| | ||||||||||| ||| ||| |||||||||||||||||  |||| |||||||||| |||||  ||| ||||||||||||| || ||||||    
T  51617 gaaagattgtcgaatgaaacttgtgggattttgacctgaactcgccacggcgagcagaggctctcacctcgctagtgacccagaaacagagtgacttgtt 51716  T
Q  228 aggttttgcgacctttgttgcacgagttgtc 258  Q
    || ||||||||||||||||||||||||||||    
T  51717 agattttgcgacctttgttgcacgagttgtc 51747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 256
Target Start/End: Complemental strand, 32892 - 32795
Alignment:
Q  161 acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggtt--ttgcgacctttgttgcacgagttg 256  Q
    ||||||||||||||   ||||||||||| ||||||||| ||| |||||||  ||||||||||||||| ||||   ||||| |||||| ||||||||||    
T  32892 acctgaactcgccatggcgagtagaggccctcgcctcgcgagctacccagttacagaatgccttgttgggttaaatgcgatctttgtcgcacgagttg 32795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 127; Significance: 1e-65; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 40359 - 40122
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| |||    
T  40359 cagagagcatgcaagatttcgtgattttgacttttgagttgatccgtagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatggagg 40260  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||||| |||||||||||||||||  |||| ||||| |||||||||  |||| |||||||||||||||| | || ||| ||||    
T  40259 atgagattgaacctggaaagattgtagaatgaaacttttgg-tttctaacctgtactcgccacggcgagcagaggctctcgcctcgcgggtgacctagaa 40161  T
Q  213 acagaatgccttgtta-ggttttgcgacctttgttgcac 250  Q
    || || |||||||||| | ||||||||||||||||||||    
T  40160 accgagtgccttgttatgattttgcgacctttgttgcac 40122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 39549 - 39669
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||| ||||||| ||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||| |||| | |||||||||||||||     
T  39549 cagagagcatgccagatttcatgattttgacttttgagttgatccttagatgcttttgagtacctgaacatgtctattaatgattaggaaagaatgtaga 39648  T
Q  114 atgagattagacctggaaaga 134  Q
    ||||||||  |||||||||||    
T  39649 atgagattgaacctggaaaga 39669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 175
Target Start/End: Complemental strand, 26662 - 26567
Alignment:
Q  80 aacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccac 175  Q
    ||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||| |||||||    
T  26662 aacatgtctaataatgattaggaaagaatgtaggatgagattaaacctggaaagattgtagaatgaaacttttgg-attctgacctgaagtcgccac 26567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 72 - 198
Target Start/End: Original strand, 59179 - 59304
Alignment:
Q  72 agtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcg 171  Q
    ||||||||||||||||||||||| | ||||| ||||||||| ||||||||  ||||| ||||| ||||||||||| ||| |  |  |||||| |||||||    
T  59179 agtgcctgaacatgtctaataatgattaggacagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaacctgacc-gaactcg 59277  T
Q  172 ccacaacgagtagaggctctcgcctcg 198  Q
    |||   |||| ||||||||||||||||    
T  59278 ccatggcgagcagaggctctcgcctcg 59304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 257
Target Start/End: Complemental strand, 26212 - 26154
Alignment:
Q  200 gagttacccagaaacagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    |||| ||||||||||  | |||||||||||| |||||||||||||||||||||| ||||    
T  26212 gagtgacccagaaaccaagtgccttgttaggattttgcgacctttgttgcacgatttgt 26154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 13703 - 13469
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||||| ||||||||||||||||||| |||||||||||| | ||||||||||||||||    
T  13703 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttatatgcttttgagtgcctgaaaatgtctaataatgattaggaaagaatgtagg 13604  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    |||||| |  |||||          ||||||||||| ||| |||||||||||||||||||||  |||| |||||||||||||||| |||| ||| ||||     
T  13603 atgagactgaacctg----------gaatgaaacttgtggcattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaat 13514  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||    
T  13513 cagagtgccttgttagattttgcgacctttgttgcacgagttgtc 13469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 29 - 257
Target Start/End: Complemental strand, 23370 - 23141
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||| ||||| ||| |||| ||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||| || |||    
T  23370 atttcgtaattttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggatctg 23271  T
Q  129 gaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt 227  Q
    |||||||| ||||||  || |||||||||||||| |||| ||||||||| |||| |||||| ||||||||| |||| ||| ||||||||| || ||||||    
T  23270 gaaagattgtagaattgaa-ttttggaattctgaactgagctcgccacagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgtcttgtt 23172  T
Q  228 agg-ttttgcgacctttgttgcacgagttgt 257  Q
    ||| |||||||||||||||||||||||||||    
T  23171 aggtttttgcgacctttgttgcacgagttgt 23141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 678 - 912
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||    
T  678 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagg 777  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||          |||| |||||||| ||| |||||||||||||||||||||  |||| |||||||||||||||| |||| |||||||||    
T  778 atgagattgaacc----------tagattgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 867  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || |||||||| |||||||||||||||||||||| |||||    
T  868 cagagtgacttgttagattttgcgacctttgttgcacgaattgtc 912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 10055 - 10289
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  10055 cagagagcatgcaagatttcgtatttttgacttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 10154  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||          |||| |||||| ||| |||||||||||||||||||||   ||| |||||||||||||||| |||| |||||||||    
T  10155 atgagattgaacctg----------gaattaaacttgtgggattctgacctgaactcgccacggggagcagaggctctcgcctcgcgagtgacccagaaa 10244  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || |||||||| |||||||||| |||||||||||||||||    
T  10245 cagagtgacttgttagattttgcgaccattgttgcacgagttgtc 10289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 24 - 257
Target Start/End: Original strand, 16227 - 16462
Alignment:
Q  24 gcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattag 123  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||| ||||||||      
T  16227 gcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagaatgagattga 16326  T
Q  124 acctggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgcc 222  Q
    ||||||||||| ||| ||||||||| ||||||| ||| ||||||||||||||   |||| |||||||||||||||| |||| ||||| ||||||| ||||    
T  16327 acctggaaagattttcgaatgaaacgtttggaaatctaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgcc 16426  T
Q  223 ttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    ||||| || |||||||| || ||| |||| ||||||    
T  16427 ttgttgggattttgcgatctgtgtcgcacaagttgt 16462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 681 - 915
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||| |||||||||||  |||| ||| |||| |||| ||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||    
T  681 cagagagcattcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagg 780  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  ||||||||          | |||||| |||||||||||||||||||||||||  |||| |||||||||||||||| |||| |||||||||    
T  781 atgagattgaacctggaa----------ttaaacttgtggaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtaacccagaaa 870  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || |||||||| |||||| ||||||||||||||| |||||    
T  871 cagagtgacttgttagattttgcaacctttgttgcacgatttgtc 915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 113; Significance: 3e-57; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 15 - 216
Target Start/End: Complemental strand, 5010 - 4808
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| |    
T  5010 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaa 4911  T
Q  115 tgagattagacctggaaaga--tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    |||||||  |||||||||||  |||||||||||||||| |||| ||||||||||||||||||   |||| |||||||||||| ||| |||| ||||||||    
T  4910 tgagattgaacctggaaagatttttagaatgaaactttgggaa-tctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaa 4812  T
Q  213 acag 216  Q
    ||||    
T  4811 acag 4808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 15 - 216
Target Start/End: Complemental strand, 12592 - 12390
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| |    
T  12592 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaa 12493  T
Q  115 tgagattagacctggaaaga--tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    |||||||  |||||||||||  |||||||||||||||| |||| ||||||||||||||||||   |||| |||||||||||| ||| |||| ||||||||    
T  12492 tgagattgaacctggaaagatttttagaatgaaactttgggaa-tctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaa 12394  T
Q  213 acag 216  Q
    ||||    
T  12393 acag 12390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 15 - 216
Target Start/End: Complemental strand, 22544 - 22342
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    ||||||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| |    
T  22544 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaa 22445  T
Q  115 tgagattagacctggaaaga--tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    |||||||  |||||||||||  |||||||||||||||| |||| ||||||||||||||||||   |||| |||||||||||| ||| |||| ||||||||    
T  22444 tgagattgaacctggaaagatttttagaatgaaactttgggaa-tctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaa 22346  T
Q  213 acag 216  Q
    ||||    
T  22345 acag 22342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 1696 - 1936
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| |||||||||  |||||||| ||| |||| |||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||     
T  1696 cagagagcttgcaagattctgtgattttgacttttgagttgatccttagatg-ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 1794  T
Q  114 atgagattagacctggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||||||||| ||||||||||||| ||||||| ||||||||||| ||||||   |||| |||||||||||||||| |||| ||||||      
T  1795 atgagattgaacctggaaagattttagaatgaaac-tttggaaatctgacctgaattcgccatggcgagcagaggctctcgcctcgcgagtgacccagtt 1893  T
Q  213 acagaatgccttgttagg-ttttgcgacctttgttgcacgagt 254  Q
    ||||||||| |  ||||| |||||||| |||||| ||||||||    
T  1894 acagaatgcttgtttaggattttgcgatctttgtcgcacgagt 1936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 14 - 253
Target Start/End: Original strand, 580 - 821
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||     
T  580 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtaga 679  T
Q  114 atgagattagacctggaaagatttagaatgaaactt-ttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    | ||||||  ||||||     |  |||||||||||| |||||| ||||||||||||||||||   |||| ||||| || |||||||||||| ||| ||||    
T  680 acgagattgaacctggtttagtagagaatgaaacttgttggaaatctgacctgaactcgccatggcgagcagaggttcccgcctcgtgagtgacctagaa 779  T
Q  213 acagaatgccttgttagg-ttttgcgacctttgttgcacgag 253  Q
    |||||  | ||||||||| |||| ||||||||||||||||||    
T  780 acagagagtcttgttaggatttttcgacctttgttgcacgag 821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 105; Significance: 2e-52; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 16588 - 16346
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    |||||||||||||||||||  |||||| ||| |||| |||||||||||  |||||||||||||||||||||||||||||| | |||||||||||||||||    
T  16588 agagagcatgcaagatttcaagattttgacttttgagttgatccttagg-gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 16490  T
Q  115 tgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
     ||||||  ||||||||||||| ||||||  || |||||||||||||| |||| ||||||||  |||  |||||| ||| |||||  ||| |||||||||    
T  16489 cgagattgaacctggaaagattgtagaattgaa-ttttggaattctgaactgagctcgccacggcgatcagaggccctcacctcgcaagtgacccagaaa 16391  T
Q  214 cagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    ||||  | ||||||||| |||||||||||||||||||||||||||    
T  16390 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgt 16346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 238
Target Start/End: Original strand, 32577 - 32802
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| ||| |||| | || ||||||||||||||||||| |||||||||||||||||| | |||||| || || ||     
T  32577 cagagagcttgcaagatttcgtgattttgacttttgagtcgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggaga 32676  T
Q  114 atgagattagacctggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||| ||||| ||||||||| || |||||  | |   |||  ||||||||||| |||| |||||||| ||||||| |||| ||||| ||    
T  32677 atgagattgaacctgtaaagattttagaatg-aatttttgtgagttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgacccataa 32775  T
Q  213 acagaatgccttgttagg-ttttgcga 238  Q
    |||||||| ||||||||| ||||||||    
T  32776 acagaatgtcttgttaggattttgcga 32802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 238
Target Start/End: Complemental strand, 46428 - 46203
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| ||| |||| | || ||||||||||||||||||| |||||||||||||||||| | |||||| || || ||     
T  46428 cagagagcttgcaagatttcgtgattttgacttttgagtcgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggaga 46329  T
Q  114 atgagattagacctggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||| ||||| ||||||||| || |||||  | |   |||  ||||||||||| |||| |||||||| ||||||| |||| ||||| ||    
T  46328 atgagattgaacctgtaaagattttagaatg-aatttttgtgagttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgacccataa 46230  T
Q  213 acagaatgccttgttagg-ttttgcga 238  Q
    |||||||| ||||||||| ||||||||    
T  46229 acagaatgtcttgttaggattttgcga 46203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 15233 - 15422
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||| |||||||||| ||| |||| |||||||||||||||||||||||||||||| |||| ||||||| | |||||||||||||||     
T  15233 cagagagcatgcaagatatcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaatatgtttaataatgattaggaaagaatgtaga 15332  T
Q  114 atgagattagacctggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
    ||||||||  | ||||| ||| |||||||||||||||| |||| |||||||||||||||||| | |||| |||||||||||||||| ||||    
T  15333 atgagattgaatctggatagattttagaatgaaactttgggaa-tctgacctgaactcgccatagcgagcagaggctctcgcctcgcgagt 15422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 17626 - 17788
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||| ||||||| ||| |||| || | |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  17626 cagagagcatgcaagatttcatgattttgacttttgagttaaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 17725  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccac 175  Q
    ||||||||  ||||||| ||||| ||||||||||||| ||| |||||||||||||||||||||    
T  17726 atgagattgaacctggatagattgtagaatgaaacttgtgggattctgacctgaactcgccac 17788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 200 - 257
Target Start/End: Original strand, 17792 - 17849
Alignment:
Q  200 gagttacccagaaacagaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    |||| ||||||||| ||| || ||||||||||||||||||||||||||||||||||||    
T  17792 gagtcacccagaaatagagtgacttgttaggttttgcgacctttgttgcacgagttgt 17849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 2444 - 2210
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| |||||||||| ||||||||||||||| ||||||||||||| |||||| |||||||||    
T  2444 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacgtgtctaataataattaggaaggaatgtagg 2345  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||          |||| ||||||  || || ||||||||||||||||||  |||| |||||||||||||||| |||| ||| |||||    
T  2344 atgagattgaacctg----------gaattaaacttgagggatgctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaa 2255  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || | |||||| ||||||||||||||||||||||||||||    
T  2254 cagagtgacatgttagattttgcgacctttgttgcacgagttgtc 2210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 13987 - 13753
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||| ||||||     
T  13987 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaggatgtagc 13888  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||          |||| |||||| ||  ||||||| |||||||||||||  |||| |||||||||||||||| |||  |||||||||    
T  13887 atgagattgaacctg----------gaattaaacttgtgagattctgagctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacccagaaa 13798  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || |||||||| ||||||||| ||||||||||||||||||    
T  13797 cagagtgacttgttagattttgcgacttttgttgcacgagttgtc 13753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 102; Significance: 9e-51; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 15094 - 15328
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| || | |||| || ||||||||||||||||||| || |||||||||||| | ||||||||||||||||    
T  15094 cagagagcatgcaagatttcgtatttttgacttttaagttgaaccgtagatgcttttgagtgccttaatatgtctaataatgattaggaaagaatgtagg 15193  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  ||||||||          | |||||| | | |||||||||||||||||||||   ||| |||||||||||||||| |||| |||||||||    
T  15194 atgagattgaacctggaa----------taaaacttgtaggattctgacctgaactcgccacggagagcagaggctctcgcctcgcgagtgacccagaaa 15283  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || |||||||| ||||||||||||||||||||||||||||    
T  15284 cagagtgacttgttagattttgcgacctttgttgcacgagttgtc 15328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 32894 - 32968
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtct 88  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| |||||||||||||||| |||||||||||||||    
T  32894 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgaatgcctgaacatgtct 32968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 5339 - 5108
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    |||||||||||||||||| || ||||| ||| |||| |||| |||||||||||||||||||| |||| |||||||||||| | |||||||||||||||||    
T  5339 agagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcatgaagatgtctaataatgattaggaaagaatgtagga 5240  T
Q  115 tgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaac 214  Q
    |||||||  |||||          ||||||||||| ||   ||||||||||||||||||||  |||||||||||||| |||||| |||| ||| ||||||    
T  5239 tgagattgaacctg----------gaatgaaacttgtgaggttctgacctgaactcgccacggcgagtagaggctcttgcctcgcgagtgacctagaaac 5150  T
Q  215 agaatgccttgttaggttttgcgacctttgttgcacgagttgt 257  Q
    ||| || ||||||| ||||||| ||||||||||||||||||||    
T  5149 agagtgacttgtta-gttttgccacctttgttgcacgagttgt 5108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 5026 - 4782
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||| ||| ||| |||| |||| |||||||||||||||||||||| |||||||||| |||| |||||| |||| |||||     
T  5026 cagagagcttgcaagatttcgtgactttaacttttgagttgaaccttagatgcttttgagtgcctaaacatgtctattaatgactagggaagattgtaga 4927  T
Q  114 atgagattagacctggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  ||||| ||||| ||||||||| ||||||||    || ||||||  |||||||   |||| | ||||||||||||||  || |||||||||    
T  4926 atgagattgaacctgaaaagattttagaatg-aacttttgtcgatcagacctgtcctcgccatggcgagcaaaggctctcgcctcgcaagctacccagaa 4828  T
Q  213 acagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||    
T  4827 acagaatgccatgttaggattttgcgacctttgttgcacgagttgt 4782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 428 - 193
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  428 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 329  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  | |||          |||| |||||| ||| ||||||||||||||||||||   |||| ||||||||||||||||  ||| ||||| ||     
T  328 atgagattgaatctg----------gaattaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcaagtgacccataat 239  T
Q  214 cagaatgccttgttag-gttttgcgacctttgttgcacgagttgtc 258  Q
     ||| || ||||||||  |||||| |||||||||||||||||||||    
T  238 aagagtgacttgttagatttttgcaacctttgttgcacgagttgtc 193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 5204 - 4969
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  5204 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 5105  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  | |||          |||| |||||| ||| ||||||||||||||||||||   |||| ||||||||||||||||  ||| ||||| ||     
T  5104 atgagattgaatctg----------gaattaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcaagtgacccataat 5015  T
Q  214 cagaatgccttgttag-gttttgcgacctttgttgcacgagttgtc 258  Q
     ||| || ||||||||  |||||| |||||||||||||||||||||    
T  5014 aagagtgacttgttagatttttgcaacctttgttgcacgagttgtc 4969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 258
Target Start/End: Complemental strand, 32553 - 32322
Alignment:
Q  17 agagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatg 116  Q
    |||||||||||||||||||  |||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  32553 agagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgactaggaaagaatgtgggatg 32454  T
Q  117 agattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacag 216  Q
    |||||  |||||          |||| |||||| ||| |||||||| |||||| |||||  |||| |||||||||||||||| |||| ||||||||||||    
T  32453 agattgaacctg----------gaattaaacttgtgggattctgacttgaacttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacag 32364  T
Q  217 aatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    | |  ||| || | |||||||||||||||||| | |||||||    
T  32363 agttacttttttgattttgcgacctttgttgctctagttgtc 32322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 4760 - 4994
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| |||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||    
T  4760 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 4859  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||          ||||  ||||| ||| |||||||||||||||||||| |  ||| ||||| |||||||||| |||| || ||||||    
T  4860 atgagattgaacctg----------gaattgaacttatgggattctgacctgaactcgccaaagagagcagaggatctcgcctcgcgagtgacacagaaa 4949  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || ||| || | ||||| ||||||||||||||||||||||    
T  4950 cagagtgacttattggattttgagacctttgttgcacgagttgtc 4994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 217
Target Start/End: Original strand, 631 - 834
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| || ||||||| |||||||| ||  | || |||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||     
T  631 cagagagcttgtaagattttgtgattttgaccttcgagttgatccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 730  T
Q  114 atgagattagacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaa 212  Q
    ||||||||  | ||| ||||||| ||||||| ||||||||||| |||||||||||||||||||   |||  ||||||||||||||| |||| ||||||||    
T  731 atgagattgaatctgaaaagattgtagaatg-aacttttggaaatctgacctgaactcgccacggtgagcggaggctctcgcctcgcgagtgacccagaa 829  T
Q  213 acaga 217  Q
    |||||    
T  830 acaga 834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 18576 - 18712
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||| ||| ||||  |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  18576 cagagagcatgcaagattttgtgattttgacttttgagatgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 18675  T
Q  114 atgagattagacctggaaagatt-tagaatgaaactt 149  Q
    ||||||||  ||||||||||||| |||||||||||||    
T  18676 atgagattgaacctggaaagattgtagaatgaaactt 18712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 12427 - 12610
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| ||||  ||| |||||||||| ||||||||||||||||||||||||| | | ||||||||||||||||    
T  12427 cagagagcatgcaagatttcgtgattttgacttttgagatgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 12526  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  |||||||||||  |||||||||||||| |  | ||||| ||||||||||||   |||| ||||||||||||||||    
T  12527 atgagattgaacctggaaagacatagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcg 12610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 20044 - 20227
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||| ||| ||| |||| ||||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||     
T  20044 cagagagcatgcaagatttcgtgaatttgacttttgagttgatccttagatgcttttgagttcctgaacatgtttaataatgagtaggaaagaatgtaga 20143  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  |||||||   ||| ||||||||  ||||||||  |||||||||||||||||   |||||||||||||||||||||    
T  20144 atgagattgaacctggattaattaagaatgaactttttggaa-gctgacctgaactcgccatggcgagtagaggctctcgcctcg 20227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 65412 - 65479
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaa 81  Q
    ||||||||||| ||||||| ||  |||| ||| |||| |||| ||||||||| |||||||||||||||    
T  65412 cagagagcatgtaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 65479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 7102 - 6868
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||| |||||||||| |  |||| ||| |||| |||| |||||||||| ||||||||||||||| ||||||||||| | |||||| |||||||||    
T  7102 cagagagcacgcaagatttcatatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacgtgtctaataattattaggaaggaatgtagg 7003  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  ||||||||          | ||||||  || || ||||||||||||||||||  |||| |||||||||||||||| |||| ||||| |||    
T  7002 atgagattgaacctggaa----------ttaaacttgagggatgctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccataaa 6913  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || | |||||| ||||||||||||||||||||||||||||    
T  6912 cagagtgacatgttagattttgcgacctttgttgcacgagttgtc 6868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 52067 - 51837
Alignment:
Q  18 gagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatga 117  Q
    |||| |||||||||||||  |||||||| |||| || | |||| ||||| |||||||||||||||| |||||||||| | ||||||||||||||||| ||    
T  52067 gagcttgcaagatttcgtattttttacttttgagttaaacctttgatgcctttgagtgcctgaacaagtctaataatgattaggaaagaatgtaggacga 51968  T
Q  118 gattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacaga 217  Q
    ||||  ||||||||          ||||||||  || ||||| |||||| ||||||||  |||| |||||||||||||||| |||| |||||||||||||    
T  51967 gattgaacctggaa----------tgaaacttacgggattctaacctgagctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacaga 51878  T
Q  218 atgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
     || |||||||| ||||||||| ||||||||||||||||||    
T  51877 gtgacttgttagattttgcgacttttgttgcacgagttgtc 51837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 47 - 257
Target Start/End: Original strand, 11175 - 11375
Alignment:
Q  47 ttgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaagatttagaatgaaa 146  Q
    |||| |||| |||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||  ||||||||          |||||    
T  11175 ttgagttgaaccttagattcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------tgaaa 11264  T
Q  147 cttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggttttgcgacctttgtt 246  Q
    ||| ||| || |||||||||||||||||   |||| |||||||||| ||||| |||| || |||||||| | || |||||||| ||||||||||||||||    
T  11265 cttgtgggatactgacctgaactcgccaaggcgagaagaggctctcacctcgcgagtgacacagaaacaaagtgacttgttagattttgcgacctttgtt 11364  T
Q  247 gcacgagttgt 257  Q
    |||||||||||    
T  11365 gcacgagttgt 11375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 2064 - 2246
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    |||||||||||||||||| || ||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |    
T  2064 agagagcatgcaagattttgtaattttgactgttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaa 2163  T
Q  115 tgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    |||||||  ||||| ||||| ||||||||||| ||| |  | ||||||| ||||||||||   |||| ||||||||||||||||    
T  2164 tgagattgaacctgaaaagacttagaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcg 2246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 7913 - 8048
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    |||||||||||||||||| |||||||| ||| |||| |||| |||||||||| ||||||||||||||||||||||||| | | |||||||||||||||||    
T  7913 agagagcatgcaagattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagga 8012  T
Q  115 tgagattagacctggaaagatttagaatgaaacttt 150  Q
    |||||||  ||||||||||| |||||||||||||||    
T  8013 tgagattgaacctggaaagacttagaatgaaacttt 8048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 2703 - 2825
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  2703 cagagagcttgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 2802  T
Q  114 atgagattagacctggaaagatt 136  Q
    ||||||||  |||||||||||||    
T  2803 atgagattgaacctggaaagatt 2825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 530 - 348
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||| |||||||||| || |||||||||||||||||||||| | | ||||||||||||||||    
T  530 cagagagcatgcaagatttcgtgattttgacttttgaattgaaccttagatgcctt-gagtgcctgaacatgtctaatattgattaggaaagaatgtagg 432  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||||||| | |||||||| |||||| |  | ||||| ||||||||||||   |||| ||||||||||||||||    
T  431 atgagattgaacctggaaatacttagaatggaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcg 348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 79950 - 80133
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| |||| | ||| ||||  |||||||||||||||||||||||| | | ||||||||||||||||    
T  79950 cagagagcatgcaagatttcgtgattttgacttttgagttgaacattaaatgccattgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 80049  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||||||||| ||||||||||||||| |  | ||||| ||||||||| ||   |||| ||||||||||||||||    
T  80050 atgagattgaacctggaaagacttagaatgaaactttggagaatctga-ctgaactcgacatggcgagcagaggctctcgcctcg 80133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 16771 - 16543
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| || | |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  16771 cagagagcatgcaagatttcgtacttttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 16672  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    | ||||||  |||||           ||| |||||| ||| ||| ||||| ||||||| |||  |||| |||||||||||||||| |||| ||| |||||    
T  16671 acgagattgaacctg----------aaattaaacttatgggattttgaccagaactcggcacggcgagcagaggctctcgcctcgcgagtgacctagaaa 16582  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacga 252  Q
    |||| || |||||| | ||||| ||||||||||||||||    
T  16581 cagagtgacttgttggattttgtgacctttgttgcacga 16543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 28899 - 29085
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    |||||||||||||||||| || ||||| ||| |||  |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |    
T  28899 agagagcatgcaagattttgtaattttgacttttgggttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaa 28998  T
Q  115 tgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgag 202  Q
    |||||||  |||| |||||| ||||||||||| ||| |  | ||||||| ||||| ||||   |||| ||||||||||||||||||||    
T  28999 tgagattgaacctagaaagacttagaatgaaaatttagagaatctgacc-gaactagccatggcgagcagaggctctcgcctcgtgag 29085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 7841 - 7937
Alignment:
Q  162 cctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggtt--ttgcgacctttgttgcacgagttg 256  Q
    ||||||||||||| | |||||| |||||||||||||| ||||| |||||  ||| |||||||||||||| |   ||||| |||||| ||||||||||    
T  7841 cctgaactcgccatagcgagtaaaggctctcgcctcgcgagttgcccagttacaaaatgccttgttagggtaaatgcgatctttgtcgcacgagttg 7937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 203
Target Start/End: Complemental strand, 17268 - 17094
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| ||||||||  |||||    
T  17268 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 17169  T
Q  129 gaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
    || ||| |||||||| |||||||  ||| | ||||||||||||||||   |||| |||||||||||||||| ||||    
T  17168 gatagattttagaataaaactttgagaa-tatgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 17094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 7473 - 7572
Alignment:
Q  98 taggaaagaatgtaggatgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctc 197  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||||||||| |  | ||||| ||||||||||||   | || |||||||||||||||    
T  7473 taggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggataatctga-ctgaactcgccatggcaagcagaggctctcgcctc 7571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 232
Target Start/End: Complemental strand, 9579 - 9361
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||  ||| |||| ||| ||||  ||| ||||||||||||||||||||||||||| |||||||||  | |||||||||||||||     
T  9579 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 9480  T
Q  114 atgagattagacctggaaaga-tttagaatgaaacttttggaattctg-acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccaga 211  Q
     ||||||| |||||||||||| |||||||||||  |||  |||  ||| ||||||||||||||   ||||||||||||||||||||| ||| ||||||      
T  9479 gtgagattggacctggaaagagtttagaatgaatttttgtgaa--ctgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatt 9382  T
Q  212 aacagaatgccttgttaggtt 232  Q
     ||||||||||||| ||||||    
T  9381 tacagaatgccttgctaggtt 9361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 24268 - 24452
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttt-actattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtag 112  Q
    ||||||||||||||||||||||||||||| ||| |||| || | ||||||||||  |||||||||||||||||||||||| | | ||||||||||| |||    
T  24268 cagagagcatgcaagatttcgtgatttttgacttttgagtttaaccttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatttag 24367  T
Q  113 gatgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    |||||||||  |||| |||||| ||||||||||||||| |  | ||||| ||||||||||||   |||| ||||||||||||||||    
T  24368 gatgagattgaacctagaaagacttagaatgaaactttggataatctga-ctgaactcgccatggcgagcagaggctctcgcctcg 24452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 13226 - 13333
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  13226 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 13325  T
Q  114 atgagatt 121  Q
    ||||||||    
T  13326 atgagatt 13333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 198
Target Start/End: Complemental strand, 10412 - 10230
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    |||||||||| ||||||| |||||||| ||| |||| |||| |||||||||| ||||||||||| |||||||||| || | | |||||||||||||||||    
T  10412 agagagcatgtaagattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctaaacatgtctattattgattaggaaagaatgtagga 10313  T
Q  115 tgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    |||||||  ||||||||||| |||||| |||||||| |  | ||||| ||||||||||||   |||| ||||||||||||||||    
T  10312 tgagattgaacctggaaagacttagaaggaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcg 10230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 256
Target Start/End: Complemental strand, 21392 - 21171
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagga 114  Q
    |||||||||||||||||| || ||||| ||| |||| |||| ||||||||| |||| ||||||||||||||||||||||| | || ||||||||||||||    
T  21392 agagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgttttttagtgcctgaacatgtctaataatgattatgaaagaatgtagga 21293  T
Q  115 tgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaac 214  Q
    |||||||  |||||          ||||||||||          || ||||||||||||||  |||| ||||||||||||||||||||| ||||| ||||    
T  21292 tgagattgtacctg----------gaatgaaact----------tgtcctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccaaaaac 21213  T
Q  215 agaatgccttgttaggttttgcgacctttgttgcacgagttg 256  Q
    ||| || ||||||  |||||||||||||||||||||||||||    
T  21212 agagtgacttgttgagttttgcgacctttgttgcacgagttg 21171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 47478 - 47244
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  | || ||| |||| |||| ||||||||||||||||||| ||||| |||||||||||| | |||||| |||||||||    
T  47478 cagagagcatgcaagatttcgtattgttgacttttgagttgaaccttagatgcttttgagtgtctgaatatgtctaataatgattaggaatgaatgtagg 47379  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    ||||||||  |||||          |||| |||||| ||| |||||||||||| ||||||||   | | |||||||||||||||| |||| ||||| ||     
T  47378 atgagattgaacctg----------gaattaaacttgtgggattctgacctgagctcgccacggagcgcagaggctctcgcctcgcgagtgacccaaaac 47289  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || ||||||||   | ||||||||||||||||||||||||    
T  47288 cagagtgacttgttagaaatggcgacctttgttgcacgagttgtc 47244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 29 - 209
Target Start/End: Complemental strand, 12416 - 12237
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||||| ||||| |||| ||||||| | ||||||||||||||| ||||||||  |||||    
T  12416 atttcgtgattttgacttttgaattgatccttagatgcttttgagtgtctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 12317  T
Q  129 gaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttaccca 209  Q
    ||   ||| ||||||||  ||||||||  |||||||||||||||||   ||||||||||||||| ||||| ||||| ||||    
T  12316 gattaattaagaatgaactttttggaa-actgacctgaactcgccatggcgagtagaggctctcacctcgcgagttgccca 12237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 38 - 257
Target Start/End: Complemental strand, 1382 - 1173
Alignment:
Q  38 tttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaagattt 137  Q
    |||| ||| |||| |||| |||||||||| |||||||||||||||||  |||||||| | ||||||||||||||||||||||||  ||||||||          
T  1382 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacattactaataatgattaggaaagaatgtaggatgagattgaacctggaa------ 1289  T
Q  138 agaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggttttgcg 237  Q
        |||||||| ||| ||||||||| ||||||||||   |||| |||||||||||||||  |||| |||| |||||| | |||||||| ||  ||||||    
T  1288 ----tgaaacttgtgggattctgaccagaactcgccatggcgagcagaggctctcgcctcacgagtgacccggaaacaaagtgccttgtgagactttgcg 1193  T
Q  238 acctttgttgcacgagttgt 257  Q
    ||||||||||||||||||||    
T  1192 acctttgttgcacgagttgt 1173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 16161 - 15978
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||||| ||| | || |||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||     
T  16161 cagagagcatgcaagattttgtaattttgactttagagttgatccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaga 16062  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  ||||| ||||| | | ||||||| ||| |  | ||||||| ||||||||||   |||| ||||||||||||||||    
T  16061 atgagattgaacctgaaaagactcaaaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcg 15978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 1845 - 1768
Alignment:
Q  9 aggagcagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgt 86  Q
    |||| ||||||||||| |||||||||| ||||| ||| |||| |||| ||||||||| ||||||||||||||| ||||    
T  1845 aggaccagagagcatgtaagatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgt 1768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 9452 - 9635
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||| ||||||||||||||| ||||||  ||| |||| |||| |||||||||| ||||||||||||||||||||||||| | | || |||||||||||||    
T  9452 cagatagcatgcaagatttcatgatttcgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtagg 9551  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||  | ||||||||| ||||||||||||||| |  | ||||| ||||||||| ||   |||| ||||||||||||||||    
T  9552 atgagattgaatctggaaagacttagaatgaaactttggagaatctga-ctgaactcgtcatggcgagcagaggctctcgcctcg 9635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 38 - 257
Target Start/End: Complemental strand, 3949 - 3740
Alignment:
Q  38 tttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaagattt 137  Q
    |||| ||| |||| |||| |||||||||  |||||||||||||||||| ||| |||| | ||||||||||||||||||||||||  ||||||||          
T  3949 ttttgacttttgagttgaaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctggaa------ 3856  T
Q  138 agaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggttttgcg 237  Q
        |||||||| ||| ||||||||||||||||||||   |||| ||||||||||| |||| |||| |||| |||||||| |||||||| ||  |||| |    
T  3855 ----tgaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgtctcgcgagtgacccggaaacagagtgccttgtgagactttgtg 3760  T
Q  238 acctttgttgcacgagttgt 257  Q
    ||||||||||||||||||||    
T  3759 acctttgttgcacgagttgt 3740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 38 - 257
Target Start/End: Complemental strand, 8013 - 7804
Alignment:
Q  38 tttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaagattt 137  Q
    |||| ||| |||| |||| |||||||||  |||||||||||||||||| ||| |||| | ||||||||||||||||||||||||  ||||||||          
T  8013 ttttgacttttgagttgaaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctggaa------ 7920  T
Q  138 agaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggttttgcg 237  Q
        |||||||| ||| ||||||||||||||||||||   |||| ||||||||||| |||| |||| |||| |||||||| |||||||| ||  |||| |    
T  7919 ----tgaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgtctcgcgagtgacccggaaacagagtgccttgtgagactttgtg 7824  T
Q  238 acctttgttgcacgagttgt 257  Q
    ||||||||||||||||||||    
T  7823 acctttgttgcacgagttgt 7804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 10661 - 10422
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| |||||| ||| || | | |||||||||           
T  10661 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgccttaacatgcctagtagtgattaggaaaga------- 10569  T
Q  114 atgagattagacctggaaaga-tttagaatg-aaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccaga 211  Q
    ||||||||  ||||||||||| ||||||||| ||| ||||  ||||||||||||||||||||||  |||| ||||  || ||||||| |||| ||| |||    
T  10568 atgagattgaacctggaaagattttagaatgaaaaattttcaaattctgacctgaactcgccacggcgagcagagcttcccgcctcgcgagtgacctaga 10469  T
Q  212 aacagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    |||| | |||||||||||| |||||||| || ||| |||| ||||||    
T  10468 aacaaagtgccttgttaggattttgcgatctgtgtcgcacaagttgt 10422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 10647 - 10540
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| ||  |||| ||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||    
T  10647 cagagagcttgcaagatttcgtgattttgacctttgagttgatccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtagg 10548  T
Q  114 atgagatt 121  Q
    ||||||||    
T  10547 atgagatt 10540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 29039 - 28932
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||     
T  29039 cagagagcatgcaagatttcgtgattttgacttttgagtagatccttagatgcttttgagttcctgaacatgtctaataatgattaggaaagaatgtaga 28940  T
Q  114 atgagatt 121  Q
    ||||||||    
T  28939 atgagatt 28932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 226
Target Start/End: Complemental strand, 28223 - 28121
Alignment:
Q  124 acctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgcct 223  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||  |||| | |||||||||||||| |||| ||||||||||||| |||||    
T  28223 acctggaaagatttagaatgaaactttttgaattctgacctgaactcgccacggcgagcaaaggctctcgcctcgcgagtgacccagaaacagagtgcct 28124  T
Q  224 tgt 226  Q
    |||    
T  28123 tgt 28121  T

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Target: scaffold0556 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 27 - 227
Target Start/End: Complemental strand, 7301 - 7101
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| |||||||||||||| |||||||||||||||||||||||||||| | ||||||||| || || ||||||||  |||    
T  7301 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 7202  T
Q  127 tggaaaga-tttagaatgaaacttttggaattctg-acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgcctt 224  Q
    |||||||| |||||||||||  |||  |||  ||| ||||||||||||||   ||||||||||||||||||| | ||| || | ||  ||||||||||||    
T  7201 tggaaagattttagaatgaatttttgtgaa--ctgaacctgaactcgccatggcgagtagaggctctcgccttgcgagctaactagttacagaatgcctt 7104  T
Q  225 gtt 227  Q
    |||    
T  7103 gtt 7101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 133143 - 132967
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| |||||||||||||| |||||||||||||||||||||||||||| | ||||||||| || || ||||||||  |||    
T  133143 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 133044  T
Q  127 tggaaaga-tttagaatgaaacttttggaattctg-acctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
    |||||||| |||||||||||| |||  |||  ||| ||||||||||||||   |||| |||||||||||||||| ||||    
T  133043 tggaaagactttagaatgaaattttgtgaa--ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 132967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 227
Target Start/End: Original strand, 45420 - 45621
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    |||||| || ||||||||| |||| |||||||||||||| ||||||||||||||| |||||||||||| | ||||||||| ||  | ||||||||  |||    
T  45420 agattttgtaatttttacttttgagttgatccttagatgtttttgagtgcctgaatatgtctaataatgattaggaaagattggggaatgagattgaacc 45519  T
Q  127 tggaaaga-tttagaatgaaacttttg-gaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgcctt 224  Q
    ||| |||| |||||||||||  ||||| ||||| | ||||||||||||||   ||||||||||||||||||||| ||| || | ||  |||||||| |||    
T  45520 tggtaagactttagaatgaattttttgtgaattgt-acctgaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgtctt 45618  T
Q  225 gtt 227  Q
    |||    
T  45619 gtt 45621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 1082 - 893
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| |||||||||  |||||||||  |||||||||||||| | | |||||  ||||||| |    
T  1082 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgtctttgagtgctagaacatgtctaatattgattaggagtgaatgtaag 983  T
Q  114 atgagattagacctggaaagatttagaatgaaac-ttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgag 202  Q
    |||||||  |||||||||||| ||||||||||||   |||| |||||| |||||||||||||   |||| ||| | ||||||||||||||    
T  982 atgagataggacctggaaagacttagaatgaaacaacttgggattctgccctgaactcgccatggcgagcagatgttctcgcctcgtgag 893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 256
Target Start/End: Original strand, 10305 - 10402
Alignment:
Q  161 acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggtt--ttgcgacctttgttgcacgagttg 256  Q
    |||||||||||||| | ||||||||||||||||||||| |||||  || |  ||| | ||||||||||||||   ||||| |||||||||||||||||    
T  10305 acctgaactcgccaaagcgagtagaggctctcgcctcgcgagttgtcctgttacatactgccttgttaggttaaatgcgatctttgttgcacgagttg 10402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 10200 - 10266
Alignment:
Q  28 gatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataat 94  Q
    |||||||| ||||| ||  ||||  ||| ||||||||| ||||||||||||||||||||||||||||    
T  10200 gatttcgtaattttgacctttgagatgaaccttagatgtttttgagtgcctgaacatgtctaataat 10266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 32573 - 32397
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    |||||| || ||||| ||| |||| |||||||||||||| |||||||||||||||||||||||||||| | ||||||||| || || ||||||||  |||    
T  32573 agattttgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 32474  T
Q  127 tggaaaga-tttagaatgaaacttttggaattctg-acctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
    |||||||| |||||||||||| |||  |||  ||| ||||||||||||||   |||| |||||||||| ||||| ||||    
T  32473 tggaaagactttagaatgaaattttgtgaa--ctgaacctgaactcgccatggcgagcagaggctctcacctcgcgagt 32397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 101884 - 101709
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||||||| |||| |||||||||||| | |||||||||||||||||||||||||||| | ||||||||| || || ||||||||  |||    
T  101884 agatttcgtaatttttacttttgagttgatccttagaagtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 101785  T
Q  127 tggaaaga-tttagaatgaaacttttg-gaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
    |||| ||| |||||||||||  ||||| ||| | ||||||||||||||||   |||| ||||||||| |||||| ||||    
T  101784 tggagagactttagaatgaa--ttttgtgaact-tgacctgaactcgccatggcgagcagaggctcttgcctcgggagt 101709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 39640 - 39702
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtcta 89  Q
    ||||||| | ||||| ||| |||| |||||||||||||| ||| ||||||||||||| |||||    
T  39640 agatttcataattttgacttttgagttgatccttagatgttttcgagtgcctgaacaggtcta 39702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 62; Significance: 7e-27; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 1778 - 1544
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| || | |||| | ||||||||||||| |||||||||||||||||||| | | |||  || |  |||||    
T  1778 cagagagcatgcaagatttcgtatttttgacttttaaattgaacgttagatgcttttgcgtgcctgaacatgtctaatattgattagtgaatagggtagg 1679  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    | | ||||  ||||||||          | |||||| ||||||||| | |||||||||| ||  |||| |||||||||||||||| |||| ||| |||||    
T  1678 acgtgattgaacctggaa----------ttaaacttatggaattctaaactgaactcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaaa 1589  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || |||||| |  |||||||||||||||||||||||||||    
T  1588 cagagtgacttgttggagtttgcgacctttgttgcacgagttgtc 1544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 7755 - 7521
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||| || | |||| | ||||||||||||| |||||||||||||||||||| | | |||  || |  |||||    
T  7755 cagagagcatgcaagatttcgtatttttgacttttaaattgaacgttagatgcttttgcgtgcctgaacatgtctaatattgattagtgaatagggtagg 7656  T
Q  114 atgagattagacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaa 213  Q
    | | ||||  ||||||||          | |||||| ||||||||| | |||||||||| ||  |||| |||||||||||||||| |||| ||| |||||    
T  7655 acgtgattgaacctggaa----------ttaaacttatggaattctaaactgaactcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaaa 7566  T
Q  214 cagaatgccttgttaggttttgcgacctttgttgcacgagttgtc 258  Q
    |||| || |||||| |  |||||||||||||||||||||||||||    
T  7565 cagagtgacttgttggagtttgcgacctttgttgcacgagttgtc 7521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 16150 - 16083
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||||| |||||||||||  |||| ||| |||| |||| || ||||||||||||||||||||||    
T  16150 cagagagcatccaagatttcgtatttttgacttttgaattgaaccatagatgcttttgagtgcctgaa 16083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 6449 - 6553
Alignment:
Q  17 agagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatg 116  Q
    |||| |||||||||||| ||||||| ||| ||||  |||||||||||||| ||| ||||||||||||||||||||||| | ||||||||||||||| |||    
T  6449 agagaatgcaagatttcatgattttgacttttgagatgatccttagatgccttttagtgcctgaacatgtctaataatgattaggaaagaatgtagaatg 6548  T
Q  117 agatt 121  Q
    |||||    
T  6549 agatt 6553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 6561 - 6625
Alignment:
Q  162 cctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgt 226  Q
    ||||||||||||||  |||| ||||||||||||||||  ||| ||||||||| ||| ||||||||    
T  6561 cctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaatagagtgccttgt 6625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 28440 - 28616
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    |||||||||  |||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| || || ||||||||  |||    
T  28440 agatttcgtacttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 28539  T
Q  127 tggaaaga-tttagaatgaaacttttggaattctg-acctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
    |   |||| |||||||||||| |||  |||  ||| ||||||||||||||   |||| |||||||||||||||| ||||    
T  28540 tacgaagactttagaatgaaattttgtgaa--ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 28616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 257
Target Start/End: Complemental strand, 39864 - 39735
Alignment:
Q  129 gaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt 227  Q
    |||||||| ||||||||| ||||||||| |||||||||||||||||||  |||| |||||||||||||||| |||| ||||||||||||| ||||||||     
T  39864 gaaagattgtagaatgaa-cttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtc 39766  T
Q  228 agg-ttttgcgacctttgttgcacgagttgt 257  Q
    ||| |||||||| || ||| |||| ||||||    
T  39765 aggattttgcgatctgtgtcgcacaagttgt 39735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 257
Target Start/End: Original strand, 74948 - 75077
Alignment:
Q  129 gaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt 227  Q
    |||||||| ||||||||| ||||||||| |||||||||||||||||||  |||| |||||||||||||||| |||| ||||||||||||| ||||||||     
T  74948 gaaagattgtagaatgaa-cttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtc 75046  T
Q  228 agg-ttttgcgacctttgttgcacgagttgt 257  Q
    ||| |||||||| || ||| |||| ||||||    
T  75047 aggattttgcgatctgtgtcgcacaagttgt 75077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 161173 - 161056
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||| ||||| ||| |||| |||||||||||||| |||||||||||||||||||||||||||| | ||||||||| || || ||||||||  |||||    
T  161173 atttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctg 161074  T
Q  129 gaaaga-tttagaatgaa 145  Q
    || ||| |||||||||||    
T  161073 gagagactttagaatgaa 161056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 10890 - 10970
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataat 94  Q
    ||||||||||||||||||||||  |||| ||| |||| |||| ||||||||||||||||||||||||||||||||||||||    
T  10890 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataat 10970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 225
Target Start/End: Complemental strand, 620 - 422
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| ||||||||||||   |||||||||||| ||||||||||||||| | ||||||||| || || ||||||||  ||     
T  620 agatttcgtaattttgacttttgaattgatccttagacttttttgagtgcctaaacatgtctaataatgattaggaaagattggagaatgagattgaact 521  T
Q  127 tggaaaga-tttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttg 225  Q
    |||||||| ||||||||| || |||||  | |   ||||||||||||||   |||| |||||||||||||||| |||| ||||||  |||||||| ||||    
T  520 tggaaagattttagaatg-aatttttgtgagttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgtcttg 422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 3420 - 3222
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    ||||||| ||||| ||| |||| |||||||||||||| |||||||||||||||||||||||||||| | ||||||||| || ||  |||||||  |||||    
T  3420 atttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctg 3321  T
Q  129 gaa-agatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt 227  Q
    ||| || || |||| | ||||| ||| | |   ||||||||||||||   ||||||||||| |||||||||||| ||  | ||  |||||||||||||||    
T  3320 gaatagtttaagaacg-aacttgtgggagttatacctgaactcgccatggcgagtagaggccctcgcctcgtgaattgactagttacagaatgccttgtt 3222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 203
Target Start/End: Original strand, 2460 - 2609
Alignment:
Q  53 tgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaaaga-tttagaatgaaactttt 151  Q
    |||||||||||||||||||||| ||||||||||||||||||| | ||||||||| || || ||||| ||  ||||| ||||| |||||||||||| || |    
T  2460 tgatccttagatgcttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagtttgaacctgtaaagattttagaatgaaatttgt 2559  T
Q  152 ggaattctg-acctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
    | |   ||| ||||||||||||||   ||||||||||||||||||||| ||||    
T  2560 gaa---ctgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 2609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 19756 - 19637
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    |||||| || ||||| |||  ||| |||||||||||||| |||||||||||||||||||||||||||| | |||||| || || || ||||||||  |||    
T  19756 agattttgtaattttgacttctgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaggattggagaatgagattgaacc 19657  T
Q  127 tggaaaga-tttagaatgaa 145  Q
    |||||||| |||||||||||    
T  19656 tggaaagattttagaatgaa 19637  T

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Target: scaffold0138 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 232
Target Start/End: Complemental strand, 13429 - 13225
Alignment:
Q  28 gatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacct 127  Q
    |||||||| ||||| ||  |||| |||| ||||||||| ||||||||||||||||||||||||| || | ||||||||| || ||  | |||||  ||||    
T  13429 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaagattggagattaagattgaacct 13330  T
Q  128 ggaa-agatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgt 226  Q
    |||| || || |||||| || |||||  | |   ||||||||||||||   ||||||||||| ||||||||| ||| || ||||  ||||||||||||||    
T  13329 ggaatagtttaagaatg-aatttttgtgagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcgagctaaccagttacagaatgccttgt 13231  T
Q  227 taggtt 232  Q
    ||||||    
T  13230 taggtt 13225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2044 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold2044
Description:

Target: scaffold2044; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 1075 - 1134
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagt 74  Q
    ||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||    
T  1075 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagt 1134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 232
Target Start/End: Complemental strand, 10987 - 10813
Alignment:
Q  58 cttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaa-agatttagaatgaaacttttggaat 156  Q
    |||||||| |||||||||||||||||||| ||||||| | |||||||||   |||  |||||||  |||||||| || || ||||||||  |||  || |    
T  10987 cttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctggaatagtttaagaatgaatttttgtgagt 10888  T
Q  157 tctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggtt 232  Q
    |   |||||||||||||| | ||||||||||||||||||||| |||||||| ||   || ||||||||||||||||    
T  10887 tac-acctgaactcgccatagcgagtagaggctctcgcctcgcgagttacctagttccaaaatgccttgttaggtt 10813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 2277 - 2354
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaaga 106  Q
    ||||||| ||||| ||| |||| |||||||||| ||| |||||||||||||||||||||||||||| | |||||||||    
T  2277 atttcgtaattttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 2354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 7026 - 6923
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacc 126  Q
    ||||||||| ||||| ||| |||| ||||||||| |||| ||||||||||||| |||||||||||||||| ||||||||| || ||  |||||||  |||    
T  7026 agatttcgtaattttgacttttgagttgatcctttgatg-ttttgagtgcctggacatgtctaataataattaggaaagattggagattgagattgaacc 6928  T
Q  127 tggaa 131  Q
    |||||    
T  6927 tggaa 6923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 9010 - 8961
Alignment:
Q  52 ttgatccttagatgcttttgagtgcctgaacatgtctaataataactagg 101  Q
    |||||| ||||| | |||||||||||||||||||| ||||||| ||||||    
T  9010 ttgatctttagaagattttgagtgcctgaacatgtataataatgactagg 8961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 6083 - 6004
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaaga 106  Q
    ||||||||| ||||| ||| || | |||||||||||||| ||||||||||||||||| |||||||||| | |||||||||    
T  6083 agatttcgtaattttgactttttagttgatccttagatgtttttgagtgcctgaacaggtctaataatgattaggaaaga 6004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 203
Target Start/End: Original strand, 1934 - 2108
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctg 128  Q
    |||||||  |||| ||| |||| |||||||||||||| ||||||||  |||||||||||||||||| | ||||||||| || || ||||||||  || |     
T  1934 atttcgtatttttgacttttgagttgatccttagatgtttttgagtcactgaacatgtctaataatgattaggaaagattggagaatgagattgaacata 2033  T
Q  129 gaaaga-tttagaatgaaacttttggaattctg-acctgaactcgccacaacgagtagaggctctcgcctcgtgagt 203  Q
     ||||| |||||||||||| |||  |||  ||| ||||||||||||||   | || |||||||||||||||| ||||    
T  2034 aaaagactttagaatgaaattttgtgaa--ctgaacctgaactcgccatggcaagcagaggctctcgcctcgcgagt 2108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 227
Target Start/End: Original strand, 15462 - 15661
Alignment:
Q  28 gatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacct 127  Q
    |||||||| ||||| ||| || | |||| ||||||||| |||||||||||| ||||||| |||| || | ||||||||| | |||  |||||||  ||||    
T  15462 gatttcgtaattttaacttttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattgagattgaacct 15561  T
Q  128 ggaa-agatttagaatgaaacttttggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgt 226  Q
    |||| || || |||||| |  ||| ||||||   || |||||||||||   ||||||||||| ||||||||| ||| || ||||  ||||||||||||||    
T  15562 ggaatagtttaagaatggatttttcggaatt-acacatgaactcgccatggcgagtagaggccctcgcctcgcgagctaaccagttacagaatgccttgt 15660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 15049 - 15108
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagt 74  Q
    ||||||||||||||||||||||||||| ||| |||| |||| |||||||||| |||||||    
T  15049 agagagcatgcaagatttcgtgattttcacttttgagttgaaccttagatgcctttgagt 15108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 14980 - 14914
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctga 80  Q
    ||||||||||||||||||| || ||||| ||| | || |||||||||||||||||| ||||||||||    
T  14980 cagagagcatgcaagattttgtaattttgactttagagttgatccttagatgctttggagtgcctga 14914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 130397 - 130335
Alignment:
Q  27 agatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgtcta 89  Q
    ||||||||| ||||| ||| |||| ||||||||| |||| |||||||||||||||||||||||    
T  130397 agatttcgtaattttgacttttgagttgatcctttgatgtttttgagtgcctgaacatgtcta 130335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 60479 - 60572
Alignment:
Q  162 cctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt--aggttttgcgacctttgttgcacgag 253  Q
    ||||||||||||| | ||||||||||||||||||||| ||||| |||||  ||||||| | |||||   ||||||| || |||||| |||||||    
T  60479 cctgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacagaatacattgtttagggttttgtgatctttgtcgcacgag 60572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 1562 - 1658
Alignment:
Q  162 cctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggtt--ttgcgacctttgttgcacgagttg 256  Q
    ||||||||||||| | ||||||||||||||||||||||||| | ||||   ||||||  ||||||||||||   || ||||||||| ||||||||||    
T  1562 cctgaactcgccatagcgagtagaggctctcgcctcgtgagatgcccaattacagaacaccttgttaggttacatgtgacctttgtcgcacgagttg 1658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 232
Target Start/End: Original strand, 7713 - 7893
Alignment:
Q  52 ttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaa-agatttagaatgaaacttt 150  Q
    |||| ||||||||| ||||||||| |||||||||| ||||||| | |||||||||   |||  |||||||  |||| ||| || || ||||||||  |||    
T  7713 ttgaaccttagatgtttttgagtgtctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctagaatagtttaagaatgaattttt 7812  T
Q  151 tggaattctgacctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttaggtt 232  Q
     ||  ||   |||||||||||||| | ||||||||||||||||||||| ||||||||  |   |||||||||||| ||||||    
T  7813 gggggttac-acctgaactcgccatagcgagtagaggctctcgcctcgcgagttaccttgttccagaatgccttgctaggtt 7893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 690 - 753
Alignment:
Q  58 cttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagatt 121  Q
    |||||||| |||||||||||||||||||| ||||||| | ||||||||| |||||  |||||||    
T  690 cttagatgtttttgagtgcctgaacatgtataataatgattaggaaagattgtagattgagatt 753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 798 - 864
Alignment:
Q  161 acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt 227  Q
    |||||||||||||  | ||||||||||| ||||||||| || ||||||||  ||| |||||||||||    
T  798 acctgaactcgccttagcgagtagaggccctcgcctcgcgaattacccagttacataatgccttgtt 864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 15866 - 15961
Alignment:
Q  164 tgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttg-ttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    ||||||||||| | |||||| |||| ||||||||| ||||| |||||  ||||||||||||| ||||| |||||||| |||||| |||| ||||||    
T  15866 tgaactcgccatagcgagtataggccctcgcctcgcgagttgcccagttacagaatgccttgtttaggattttgcgatctttgtcgcacaagttgt 15961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 257
Target Start/End: Complemental strand, 13482 - 13389
Alignment:
Q  166 aactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttg-ttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    ||||||||| | |||||| |||| |||||||| |||||| || ||  ||||||||||||| ||||| |||||||| |||||| |||||||||||    
T  13482 aactcgccatagcgagtataggccctcgcctcatgagttgcctagttacagaatgccttgtttaggattttgcgatctttgtcgcacgagttgt 13389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 17343 - 17402
Alignment:
Q  15 agagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagt 74  Q
    |||||||||||||||||| || ||||| ||| |||| |||| ||||||||||||||||||    
T  17343 agagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagt 17402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 198
Target Start/End: Original strand, 43440 - 43586
Alignment:
Q  52 ttgatccttagatgcttttgagtgcctgaacatgtctaataataactaggaaagaatgtaggatgagattagacctggaa-agatttagaatgaaacttt 150  Q
    |||| ||||||||| ||||||||||||||||||||||||| || | ||| ||||| | |||  |||||||  |||||||| || || ||||||  | |||    
T  43440 ttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatg-gatttt 43538  T
Q  151 tggaattctgacctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||| | |   ||||| ||||||||  ||||||||||||||||||||||    
T  43539 tgggagttacacctgtactcgccatgacgagtagaggctctcgcctcg 43586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 91
Target Start/End: Original strand, 47360 - 47399
Alignment:
Q  52 ttgatccttagatgcttttgagtgcctgaacatgtctaat 91  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  47360 ttgaaccttagatgtttttgagtgcctgaacatgtctaat 47399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 20483 - 20418
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctg 79  Q
    ||||||||||||||||||| ||  |||| ||| |||| |||| ||||||||| |||||||||||||    
T  20483 cagagagcatgcaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctg 20418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 362 - 322
Alignment:
Q  162 cctgaactcgccacaacgagtagaggctctcgcctcgtgag 202  Q
    ||||||||||||| | |||||||||||||||||||||||||    
T  362 cctgaactcgccatagcgagtagaggctctcgcctcgtgag 322  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 70296 - 70224
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaacatgt 86  Q
    |||||||||||||||||||  |  |||| ||| |||| |||| ||||||||| ||||||||||||||| ||||    
T  70296 cagagagcatgcaagattttatagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgt 70224  T

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Target: scaffold0243 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 5886 - 5952
Alignment:
Q  161 acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgtt 227  Q
    |||||||||||||  | ||||||||||| ||||||||| || ||||||||  ||| |||||||||||    
T  5886 acctgaactcgccttagcgagtagaggccctcgcctcgcgaattacccagttacataatgccttgtt 5952  T

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Target: scaffold0198 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 26887 - 26834
Alignment:
Q  28 gatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||| ||||| ||| |||| |||| ||||||||| |||||||||||||||    
T  26887 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 26834  T

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Target: scaffold0167 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 36024 - 36077
Alignment:
Q  28 gatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||| ||||| ||| |||| |||| ||||||||| |||||||||||||||    
T  36024 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 36077  T

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Target: scaffold0131 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 36944 - 36891
Alignment:
Q  28 gatttcgtgatttttactattgatttgatccttagatgcttttgagtgcctgaa 81  Q
    |||||||| ||||| ||| |||| |||| ||||||||| |||||||||||||||    
T  36944 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 36891  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 257
Target Start/End: Complemental strand, 225763 - 225666
Alignment:
Q  161 acctgaactcgccacaacgagtagaggctctcgcctcgtgagttacccagaaacagaatgccttgttagg-ttttgcgacctttgttgcacgagttgt 257  Q
    ||||||| |||||| ||| ||||||||| || |||||| |||||||  ||  ||||||||| |  ||||| |||||||| |||||| |||||||||||    
T  225763 acctgaaatcgccataacaagtagaggcccttgcctcgcgagttacatagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagttgt 225666  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 30379 - 30428
Alignment:
Q  29 atttcgtgatttttactattgatttgatccttagatgcttttgagtgcct 78  Q
    ||||||| ||||| ||| |||| |||| ||||||||||||||||||||||    
T  30379 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 30428  T

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Target: scaffold0367 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 1370 - 1318
Alignment:
Q  37 atttttactattgatttgatccttagatgcttttgagtgcctgaacatgtcta 89  Q
    ||||| ||| |||| |||| |||||||||||||||||||||| || |||||||    
T  1370 attttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtcta 1318  T

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Target: scaffold0280 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 18941 - 18985
Alignment:
Q  34 gtgatttttactattgatttgatccttagatgcttttgagtgcct 78  Q
    |||||||| ||| |||| |||| ||||||||||||||||||||||    
T  18941 gtgattttgacttttgagttgaaccttagatgcttttgagtgcct 18985  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 198
Target Start/End: Original strand, 128735 - 128771
Alignment:
Q  162 cctgaactcgccacaacgagtagaggctctcgcctcg 198  Q
    ||||||||||||| | |||||||||||||||||||||    
T  128735 cctgaactcgccatagcgagtagaggctctcgcctcg 128771  T

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