View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
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Alignment Overview
Query: NF0157_low_5 (Length: 514)
Name: NF0157_low_5
Description: NF0157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
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Alignment Details
Target: chr2 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 9 - 298
Target Start/End: Complemental strand, 17196703 - 17196414
Alignment:
| Q | 9 | agcacagagcgtgagaaatggagacaccaccctcaaccggcgccgtgaagaagaaggagacaagaggacgcaaacctaaacccaaggaagacaagagaga | 108 | Q |
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| T | 17196703 | agcacagagagtgagaaatggagacaccaccctcaaccggcgccgtgaagaagaaggagacaagaggacgcaaacctaaacccaaggaagacaagagaga | 17196604 | T |
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| Q | 109 | agaaccatcacaagtgaagacaccgagagaatcgaagaaggaaaagcaacagcaacagcttcatcagcagcagcaacaacaagcttctgttgatgagaag | 208 | Q |
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| T | 17196603 | agaaccatcacaagtgaagtcaccgagagaatcgaagaaggaaaagcaacagcaacagcttcatcagcagcagcaacaacaagcttctgttgatgagaag | 17196504 | T |
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| Q | 209 | tactctcaatggaaatctcttgttcctgttctttatgattggctcgctaattataacctcgtttggccttctctctcttgccggttaggg | 298 | Q |
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| T | 17196503 | tactctcaatggaaatctcttgttcctgttctttatgattggcttgctaatcataacctcgtttggccttctctctcttgccggttaggg | 17196414 | T |
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