View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0160_low_2 (Length: 561)

Name: NF0160_low_2
Description: NF0160
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0160_low_2
NF0160_low_2
[»] scaffold0026 (1 HSPs)
scaffold0026 (19-475)||(12437-12872)
[»] scaffold0634 (2 HSPs)
scaffold0634 (19-420)||(2747-3147)
scaffold0634 (404-440)||(3181-3217)
[»] chr2 (18 HSPs)
chr2 (19-472)||(26582856-26583313)
chr2 (19-357)||(23168954-23169294)
chr2 (19-357)||(23580211-23580551)
chr2 (317-475)||(5706610-5706768)
chr2 (323-478)||(23878326-23878481)
chr2 (130-478)||(23062869-23063216)
chr2 (302-425)||(29281353-29281475)
chr2 (294-456)||(25181446-25181606)
chr2 (318-456)||(9949-10086)
chr2 (228-440)||(26884489-26884701)
chr2 (245-420)||(23089604-23089779)
chr2 (245-420)||(23102032-23102207)
chr2 (314-420)||(21907746-21907852)
chr2 (245-388)||(24660876-24661019)
chr2 (294-388)||(27208324-27208417)
chr2 (294-388)||(27210659-27210752)
chr2 (416-478)||(23264551-23264613)
chr2 (130-218)||(23264301-23264388)
[»] chr6 (28 HSPs)
chr6 (19-472)||(29614738-29615195)
chr6 (280-475)||(12167637-12167832)
chr6 (280-475)||(19286546-19286741)
chr6 (280-473)||(19877730-19877923)
chr6 (280-475)||(19883506-19883701)
chr6 (280-475)||(19786455-19786650)
chr6 (317-475)||(34640575-34640733)
chr6 (317-475)||(34647249-34647407)
chr6 (315-475)||(25470290-25470451)
chr6 (340-473)||(21365067-21365200)
chr6 (340-473)||(23969049-23969182)
chr6 (104-420)||(25396343-25396658)
chr6 (314-420)||(18799818-18799924)
chr6 (318-456)||(20008493-20008630)
chr6 (245-420)||(21565761-21565936)
chr6 (253-445)||(19471891-19472082)
chr6 (20-136)||(19786751-19786866)
chr6 (228-379)||(19300359-19300509)
chr6 (20-136)||(12167420-12167535)
chr6 (20-136)||(19877513-19877628)
chr6 (20-136)||(19883289-19883404)
chr6 (20-136)||(19286329-19286444)
chr6 (416-475)||(24513370-24513429)
chr6 (302-440)||(29097221-29097359)
chr6 (302-379)||(9099694-9099770)
chr6 (294-379)||(11289294-11289378)
chr6 (403-440)||(31251879-31251916)
chr6 (295-358)||(9186841-9186903)
[»] chr3 (22 HSPs)
chr3 (20-472)||(41455687-41456142)
chr3 (23-478)||(18914193-18914646)
chr3 (328-472)||(24192274-24192418)
chr3 (302-439)||(14865201-14865338)
chr3 (314-420)||(16802037-16802143)
chr3 (317-418)||(55499698-55499799)
chr3 (227-414)||(13324376-13324562)
chr3 (88-145)||(18136117-18136174)
chr3 (227-358)||(13302844-13302974)
chr3 (362-478)||(17241085-17241201)
chr3 (296-474)||(10415123-10415301)
chr3 (296-474)||(10421793-10421971)
chr3 (363-456)||(17131147-17131240)
chr3 (227-358)||(13313520-13313650)
chr3 (405-474)||(10390034-10390104)
chr3 (363-420)||(12034015-12034072)
chr3 (88-141)||(18129607-18129660)
chr3 (302-440)||(19235629-19235767)
chr3 (23-79)||(18136249-18136306)
chr3 (93-197)||(9533232-9533335)
chr3 (294-358)||(12034057-12034119)
chr3 (23-78)||(18129736-18129792)
[»] chr7 (30 HSPs)
chr7 (19-472)||(13123506-13123967)
chr7 (155-472)||(13742860-13743174)
chr7 (19-472)||(12710435-12710896)
chr7 (280-475)||(13006706-13006901)
chr7 (317-475)||(12591230-12591389)
chr7 (340-473)||(3857953-3858087)
chr7 (318-456)||(2464736-2464874)
chr7 (130-478)||(13678649-13678995)
chr7 (302-456)||(16090442-16090595)
chr7 (245-478)||(16676623-16676845)
chr7 (245-478)||(17650859-17651081)
chr7 (302-456)||(29181654-29181807)
chr7 (344-456)||(20311597-20311709)
chr7 (151-450)||(46625166-46625464)
chr7 (19-136)||(13742686-13742803)
chr7 (314-420)||(11389918-11390024)
chr7 (295-410)||(11383440-11383554)
chr7 (317-440)||(14320192-14320316)
chr7 (20-136)||(13006489-13006604)
chr7 (363-456)||(2966383-2966476)
chr7 (363-456)||(20906993-20907086)
chr7 (93-184)||(18607248-18607339)
chr7 (93-197)||(147453-147556)
chr7 (405-452)||(13678982-13679030)
chr7 (93-147)||(16475929-16475983)
chr7 (416-466)||(21231532-21231582)
chr7 (295-420)||(21231567-21231690)
chr7 (405-441)||(13664450-13664487)
chr7 (88-132)||(13318007-13318051)
chr7 (294-358)||(20907071-20907133)
[»] chr4 (14 HSPs)
chr4 (19-475)||(8046420-8046893)
chr4 (317-475)||(53483013-53483171)
chr4 (302-456)||(16147376-16147529)
chr4 (294-456)||(11847453-11847614)
chr4 (295-478)||(15407438-15407608)
chr4 (297-450)||(15244566-15244719)
chr4 (328-420)||(14486052-14486144)
chr4 (297-450)||(13887138-13887289)
chr4 (297-450)||(13887995-13888146)
chr4 (88-145)||(14555881-14555938)
chr4 (297-446)||(15307471-15307620)
chr4 (227-290)||(14485975-14486037)
chr4 (294-373)||(27905613-27905691)
chr4 (96-197)||(18212523-18212623)
[»] scaffold0117 (1 HSPs)
scaffold0117 (19-472)||(9167-9628)
[»] chr8 (12 HSPs)
chr8 (19-472)||(23865615-23866078)
chr8 (294-456)||(24321216-24321376)
chr8 (365-475)||(17053949-17054060)
chr8 (19-136)||(19902808-19902924)
chr8 (295-478)||(25111338-25111508)
chr8 (344-478)||(14057148-14057271)
chr8 (130-420)||(18613409-18613695)
chr8 (90-145)||(19987990-19988045)
chr8 (94-144)||(20005423-20005473)
chr8 (23-72)||(20005563-20005612)
chr8 (20-111)||(17053780-17053870)
chr8 (245-289)||(21931018-21931062)
[»] scaffold1773 (2 HSPs)
scaffold1773 (151-472)||(324-644)
scaffold1773 (19-136)||(153-269)
[»] scaffold0029 (3 HSPs)
scaffold0029 (19-472)||(110939-111378)
scaffold0029 (327-456)||(91747-91876)
scaffold0029 (327-456)||(97473-97602)
[»] chr5 (21 HSPs)
chr5 (20-475)||(23527632-23528099)
chr5 (340-473)||(28889925-28890058)
chr5 (340-473)||(28896629-28896762)
chr5 (340-473)||(28909877-28910010)
chr5 (340-473)||(28931569-28931702)
chr5 (340-473)||(28946272-28946405)
chr5 (294-456)||(19236250-19236410)
chr5 (294-456)||(22467130-22467290)
chr5 (294-456)||(22460506-22460666)
chr5 (340-473)||(28933070-28933205)
chr5 (295-452)||(18408491-18408647)
chr5 (294-440)||(34829432-34829578)
chr5 (88-145)||(22232436-22232493)
chr5 (405-475)||(20819618-20819689)
chr5 (405-475)||(20826718-20826789)
chr5 (302-440)||(20781102-20781240)
chr5 (302-440)||(20772327-20772465)
chr5 (302-440)||(24930489-24930627)
chr5 (368-417)||(22439321-22439370)
chr5 (130-197)||(23112480-23112546)
chr5 (23-79)||(22232568-22232625)
[»] scaffold0456 (2 HSPs)
scaffold0456 (191-475)||(241-504)
scaffold0456 (191-475)||(7386-7649)
[»] scaffold0025 (1 HSPs)
scaffold0025 (328-472)||(14977-15121)
[»] chr1 (14 HSPs)
chr1 (280-473)||(41111214-41111407)
chr1 (294-456)||(21705625-21705785)
chr1 (294-456)||(21710167-21710328)
chr1 (294-456)||(20851678-20851838)
chr1 (318-456)||(20858305-20858442)
chr1 (228-441)||(19961472-19961684)
chr1 (295-420)||(18712098-18712223)
chr1 (88-145)||(20941657-20941714)
chr1 (20-136)||(41110997-41111112)
chr1 (245-450)||(22030298-22030504)
chr1 (130-358)||(11157328-11157554)
chr1 (93-197)||(20438224-20438327)
chr1 (23-78)||(23631145-23631200)
chr1 (23-79)||(20941789-20941846)
[»] scaffold0053 (2 HSPs)
scaffold0053 (132-451)||(81764-82082)
scaffold0053 (302-456)||(80036-80189)
[»] scaffold0249 (2 HSPs)
scaffold0249 (88-239)||(7517-7667)
scaffold0249 (23-79)||(7742-7798)
[»] scaffold0154 (1 HSPs)
scaffold0154 (240-420)||(30194-30374)
[»] scaffold0085 (1 HSPs)
scaffold0085 (294-456)||(4217-4377)
[»] scaffold0247 (1 HSPs)
scaffold0247 (314-475)||(10679-10829)
[»] scaffold0924 (1 HSPs)
scaffold0924 (369-472)||(1343-1446)
[»] scaffold0317 (2 HSPs)
scaffold0317 (130-478)||(542-888)
scaffold0317 (405-452)||(875-923)
[»] scaffold0028 (3 HSPs)
scaffold0028 (105-418)||(65265-65577)
scaffold0028 (345-450)||(1467-1572)
scaffold0028 (151-213)||(1274-1336)
[»] scaffold0004 (3 HSPs)
scaffold0004 (130-388)||(116052-116308)
scaffold0004 (245-420)||(129217-129393)
scaffold0004 (416-478)||(116325-116388)
[»] scaffold0138 (1 HSPs)
scaffold0138 (245-450)||(1117-1322)
[»] scaffold0222 (1 HSPs)
scaffold0222 (295-478)||(16121-16303)
[»] scaffold0001 (3 HSPs)
scaffold0001 (228-440)||(493588-493800)
scaffold0001 (19-136)||(174440-174557)
scaffold0001 (245-388)||(525062-525204)
[»] scaffold0476 (1 HSPs)
scaffold0476 (317-439)||(3854-3976)
[»] scaffold0232 (1 HSPs)
scaffold0232 (245-450)||(18961-19166)
[»] scaffold0090 (1 HSPs)
scaffold0090 (276-440)||(17497-17661)
[»] scaffold0023 (2 HSPs)
scaffold0023 (363-456)||(134867-134960)
scaffold0023 (294-358)||(134820-134882)
[»] scaffold0461 (2 HSPs)
scaffold0461 (295-478)||(581-752)
scaffold0461 (295-379)||(7605-7688)
[»] scaffold0310 (1 HSPs)
scaffold0310 (296-420)||(6861-6983)
[»] scaffold0139 (1 HSPs)
scaffold0139 (130-479)||(15521-15856)
[»] scaffold0453 (1 HSPs)
scaffold0453 (294-440)||(11112-11258)
[»] scaffold0031 (2 HSPs)
scaffold0031 (245-450)||(121200-121406)
scaffold0031 (245-450)||(132077-132283)
[»] scaffold0483 (1 HSPs)
scaffold0483 (228-441)||(11569-11782)
[»] scaffold0261 (2 HSPs)
scaffold0261 (228-440)||(24131-24342)
scaffold0261 (404-440)||(24070-24106)
[»] scaffold0077 (3 HSPs)
scaffold0077 (330-420)||(4191-4281)
scaffold0077 (88-140)||(17972-18024)
scaffold0077 (88-140)||(23605-23657)
[»] scaffold1061 (1 HSPs)
scaffold1061 (151-362)||(1607-1817)
[»] scaffold0348 (2 HSPs)
scaffold0348 (88-145)||(1527-1584)
scaffold0348 (23-79)||(1659-1716)
[»] scaffold0124 (2 HSPs)
scaffold0124 (314-420)||(34908-35014)
scaffold0124 (422-478)||(34861-34917)
[»] scaffold0020 (1 HSPs)
scaffold0020 (130-420)||(102499-102787)
[»] scaffold0094 (1 HSPs)
scaffold0094 (253-450)||(51552-51749)
[»] scaffold0235 (3 HSPs)
scaffold0235 (314-420)||(23226-23332)
scaffold0235 (416-465)||(15475-15524)
scaffold0235 (295-420)||(15509-15633)
[»] scaffold0107 (1 HSPs)
scaffold0107 (295-420)||(41160-41283)
[»] scaffold0034 (1 HSPs)
scaffold0034 (294-412)||(72631-72748)
[»] scaffold0006 (1 HSPs)
scaffold0006 (422-472)||(49595-49645)
[»] scaffold0720 (1 HSPs)
scaffold0720 (294-379)||(3882-3966)
[»] scaffold0206 (1 HSPs)
scaffold0206 (302-379)||(18045-18121)
[»] scaffold0337 (1 HSPs)
scaffold0337 (93-197)||(9950-10053)
[»] scaffold2054 (1 HSPs)
scaffold2054 (241-379)||(14-152)
[»] scaffold1427 (1 HSPs)
scaffold1427 (130-197)||(1207-1273)
[»] scaffold0106 (2 HSPs)
scaffold0106 (23-85)||(46685-46748)
scaffold0106 (23-85)||(50958-51021)
[»] scaffold0169 (1 HSPs)
scaffold0169 (245-289)||(6299-6343)


Alignment Details
Target: scaffold0026 (Bit Score: 340; Significance: 0; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 19 - 475
Target Start/End: Complemental strand, 12872 - 12437
Alignment:
Q  19 aacctgtgtatatctacatacaacttaactacacatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataa 118  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  12872 aacctgtgtatatctacatacaactcaactacacatatatctcatatgacttactactccgagagttctaacaatccagaacatacacaattaattataa 12773  T
Q  119 ttatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcacca 218  Q
    |||||| ||||||||||||||||||||||  ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||     
T  12772 ttatgcgcatacatcaatttcattcaatag-ttatacattcacttgatttcttactcaatcatctccaaaattcactaacatcaaccaattcgatcaccg 12674  T
Q  219 gcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaagt 318  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12673 gcttgttctagtaggattctgatacctatacaagggatatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaagt 12574  T
Q  319 tcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcg 418  Q
    ||||||||||||||||||||||||||||||||||||                    ||||||||||||||||||||||||||||||||||||||||||||    
T  12573 tcagaaagaggctgactaaggctcacttcgcttaag--------------------cgaccggcttacagtaggtctgggttcagctcgcttacggttcg 12494  T
Q  419 ctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12493 ctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 12437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 291; Significance: 1e-163; HSPs: 2)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 19 - 420
Target Start/End: Original strand, 2747 - 3147
Alignment:
Q  19 aacctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattata 117  Q
    ||||||||||||||||||||||||| |||||  |||||| |||||||||||||||||||||| || | | |||||||||||||||| ||||||| |||||    
T  2747 aacctgtgtatatctacatacaactcaactaatacatatgtttcatatgacttactactccgcaact-caaacaatccagaacatagacaattatttata 2845  T
Q  118 attatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcacc 217  Q
    ||||||| |||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||| || |||||||||||||||||||||||||||||    
T  2846 attatgcgcatacatcaaattcattcaataa-ttatatattcacatgatttcaaactcaatcatctccaatattcactaacatcaaccaattcgatcacc 2944  T
Q  218 agcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaag 317  Q
     |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2945 ggcttgttctagtgggattctggtacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaag 3044  T
Q  318 ttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttc 417  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||| || ||||    
T  3045 ttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaggtctgggtttcgctcgctcacagttc 3144  T
Q  418 gct 420  Q
    |||    
T  3145 gct 3147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 440
Target Start/End: Original strand, 3181 - 3217
Alignment:
Q  404 ctcgcttacggttcgctcacggttcgcttgagcgaac 440  Q
    ||||||||||||||||||||||||||||| |||||||    
T  3181 ctcgcttacggttcgctcacggttcgcttaagcgaac 3217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 270; Significance: 1e-150; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 19 - 472
Target Start/End: Original strand, 26582856 - 26583313
Alignment:
Q  19 aacctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattata 117  Q
    |||||||||||||||||||||||||||||||  |||||| ||| |||||||||||||||||| || | | |||||||||||||||||||||||| |||||    
T  26582856 aacctgtgtatatctacatacaacttaactattacatatgttttatatgacttactactccgcaact-caaacaatccagaacatacacaattatttata 26582954  T
Q  118 attatgcacatacatcaatttcattcaataaattat----atattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgat 213  Q
    ||||||| |||||||||||  ||||| | |  ||||    ||||||||| ||||||||||||||||||||| || ||| ||||||| ||| |||||||||    
T  26582955 attatgcgcatacatcaatcacattccacatgttatgtatatattcactcgatttcatactcaatcatctccaacatttactaacaccaatcaattcgat 26583054  T
Q  214 caccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagca 313  Q
    |||| ||| |||||| ||||| || | |||||| || |||||||||| ||||||| |||||||| ||||||||||||||||||||||| |||||||| ||    
T  26583055 caccggctagttctaataggagtcggttacctacaccagggttatactagttaaaagaaatattatagaatgctcaagaagtcccctcctgcacgaaaca 26583154  T
Q  314 aaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacg 413  Q
    |||||||||||  |||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26583155 aaagttcagaagaaggctgactaagacttacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaggtctgggttcagctcgcttacg 26583254  T
Q  414 gttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 472  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26583255 ggtcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 26583313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 19 - 357
Target Start/End: Complemental strand, 23169294 - 23168954
Alignment:
Q  19 aacctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattata 117  Q
    |||| ||||||||| ||||||||||  ||||  ||||||||||||||| ||||||||||||| || | | |||||||||| ||||||||||| | |||||    
T  23169294 aacccgtgtatatccacatacaactccactaatacatatatttcatataacttactactccgcaact-caaacaatccagcacatacacaatcatttata 23169196  T
Q  118 attatgcacatacatcaatttcattcaataaattatat--attcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatca 215  Q
    ||||||| ||||||||| |  ||||| | |  ||||||  |||||| ||||||||||||||| |||||| |||||||| |||||||||||||| ||||||    
T  23169195 attatgcgcatacatcattcacattccacatgttatatacattcacatgatttcatactcaaacatctccaaaattcattaacatcaaccaatgcgatca 23169096  T
Q  216 ccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaaga-agtcccctcgtgcacgaagcaa 314  Q
    ||||  |||||||||||||| || |||||||||||||||||||||||||| || |||| |||||||||| | ||| |  ||||||| || |||||| | |    
T  23169095 ccagagtgttctagtaggatcctaatacctatacaagggttatacaagttgaaagaaacattttagaatacccaaaagggtcccctagtacacgaaac-a 23168997  T
Q  315 aagttcagaaagaggctgactaaggctcacttcgcttaagcga 357  Q
    |  ||||||||||||||||||||| ||||  ||||||||||||    
T  23168996 attttcagaaagaggctgactaagcctcagctcgcttaagcga 23168954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 19 - 357
Target Start/End: Complemental strand, 23580551 - 23580211
Alignment:
Q  19 aacctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattata 117  Q
    |||| ||||||||| ||||||||||  ||||  ||||||||||||||| ||||||||||||| || | | |||||||||| ||||||||||| | |||||    
T  23580551 aacccgtgtatatccacatacaactccactaatacatatatttcatataacttactactccgcaact-caaacaatccagcacatacacaatcatttata 23580453  T
Q  118 attatgcacatacatcaatttcattcaataaattatat--attcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatca 215  Q
    ||||||| ||||||||| |  ||||| | |  ||||||  |||||| ||||||||||||||| |||||| |||||||| |||||||||||||| ||||||    
T  23580452 attatgcgcatacatcattcacattccacatgttatatacattcacatgatttcatactcaaacatctccaaaattcattaacatcaaccaatgcgatca 23580353  T
Q  216 ccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaaga-agtcccctcgtgcacgaagcaa 314  Q
    ||||  |||||||||||||| || |||||||||||||||||||||||||| || |||| |||||||||| | ||| |  ||||||| || |||||| | |    
T  23580352 ccagagtgttctagtaggatcctaatacctatacaagggttatacaagttgaaagaaacattttagaatacccaaaagggtcccctagtacacgaaac-a 23580254  T
Q  315 aagttcagaaagaggctgactaaggctcacttcgcttaagcga 357  Q
    |  ||||||||||||||||||||| ||||  ||||||||||||    
T  23580253 attttcagaaagaggctgactaagcctcagctcgcttaagcga 23580211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 317 - 475
Target Start/End: Complemental strand, 5706768 - 5706610
Alignment:
Q  317 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtagg-tctgggttcagctcgcttacggt 415  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| |||| ||||||||||     
T  5706768 gttcagaaa-aggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacggg 5706670  T
Q  416 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  5706669 tcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagg 5706610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 323 - 478
Target Start/End: Original strand, 23878326 - 23878481
Alignment:
Q  323 aaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctc 421  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||     
T  23878326 aaagtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacggttcgctt 23878424  T
Q  422 acggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 478  Q
     | ||||||||||||||| |  || ||||||||||| ||||  ||||||||||||||    
T  23878425 gcagttcgcttgagcgaattcttggcagaatcaaaaaggttcctcgctcacaggttc 23878481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 130 - 478
Target Start/End: Original strand, 23062869 - 23063216
Alignment:
Q  130 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttct-a 228  Q
    |||||| ||||||||| | | ||||| |||||| | ||||||||||||||||||| ||| ||||||||  ||||| |||||||| ||||   |||| | |    
T  23062869 catcaagttcattcaacatagtatatgttcactaggtttcatactcaatcatctccaaa-ttcactaaactcaactaattcgattaccaaagtgttttca 23062967  T
Q  229 gtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaaga 327  Q
    ||||||||| | |   |||| |||||||||||||||| || |||| |||||  ||||||||| | | ||||||  ||||||| ||||| ||||| ||||     
T  23062968 gtaggattcag-tgtatatataagggttatacaagttgaaagaaacatttttaaatgctcaaaaggatcccctaatgcacgaggcaaa-gttcaaaaagt 23063065  T
Q  328 ggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggtt 427  Q
    ||||||||||||   |||||||||||||||||||| |||||||||| ||||||||||||||   ||  |||||   |||||| |||  |||||  |||||    
T  23063066 ggctgactaaggtcaacttcgcttaagcgacggctggttcgcttaagcgaccggcttacagagagttggggtttcactcgctaacgcctcgcttgcggtt 23063165  T
Q  428 cgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 478  Q
    ||||| |||||||||||||||||||  ||||| ||||||||| || |||||    
T  23063166 cgcttaagcgaacttctgacagaatgcaaatgatttttcgcttacgggttc 23063216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 302 - 425
Target Start/End: Original strand, 29281353 - 29281475
Alignment:
Q  302 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 401  Q
    |||||||||||||  ||||||||| |||||||||||  |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  29281353 gtgcacgaagcaag-gttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggtctgggttc 29281451  T
Q  402 agctcgcttacggttcgctcacgg 425  Q
    || |||||||||| ||||||||||    
T  29281452 agttcgcttacgggtcgctcacgg 29281475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 294 - 456
Target Start/End: Complemental strand, 25181606 - 25181446
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    ||||||| ||||||||||||| | |||||||| |||||||||||  |||| |||||||||||||||||||||| |||||| ||||| |||||||||||||    
T  25181606 gtcccctagtgcacgaagcaaga-ttcagaaa-aggctgactaacactcagttcgcttaagcgacggctagtttgcttaagcgaccagcttacagtaggt 25181509  T
Q  394 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    |||||||||| || ||||||| |||||||||| |||||| |||||| |  || ||||||||||    
T  25181508 ctgggttcagttcacttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 25181446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 318 - 456
Target Start/End: Original strand, 9949 - 10086
Alignment:
Q  318 ttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttc 417  Q
    |||||||| |||||| ||||  |||| || |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||    
T  9949 ttcagaaa-aggctgtctaacactcagtttgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtc 10047  T
Q  418 gctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    |||||||| |||||| |||||| |  || ||||||||||    
T  10048 gctcacggctcgcttaagcgaattcttggcagaatcaaa 10086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 228 - 440
Target Start/End: Original strand, 26884489 - 26884701
Alignment:
Q  228 agtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaag 326  Q
    ||||||||| |||| |||||||||| |||||||||| |||| |||| |||| | ||| ||||| | | |||||| |||||||||||||  ||||||||||    
T  26884489 agtaggatt-tgatgcctatacaagagttatacaagctaaaagaaacatttaaaaatactcaaaagggtcccctagtgcacgaagcaag-gttcagaaag 26884586  T
Q  327 aggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc-agctcgcttacggttcgctcacgg 425  Q
    ||||||||||||||||| ||||||||||||| || ||| |||||||| ||||| ||  |||  ||||   |||||  ||||||| |||||| |||||| |    
T  26884587 aggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagcacacaaaaggttgaggttctcgctcgctcacggttagctcacag 26884686  T
Q  426 ttcgcttgagcgaac 440  Q
    |||||||||||||||    
T  26884687 ttcgcttgagcgaac 26884701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 245 - 420
Target Start/End: Complemental strand, 23089779 - 23089604
Alignment:
Q  245 tatacaagggttatacaagttaaaggaaatattttagaatgctcaa-gaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 343  Q
    |||| |||||||||||||||| ||||||  || ||  ||||||||| |  ||| |||  ||||||| ||||  ||||| |||| ||||||||||||   |    
T  23089779 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaggggtctcctaatgcacgaggcaac-gttcaaaaagtggctgactaaggtcaa 23089681  T
Q  344 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 420  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  23089680 cttcgcttaagcgacgtccagttcgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacggttcgct 23089604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 245 - 420
Target Start/End: Complemental strand, 23102207 - 23102032
Alignment:
Q  245 tatacaagggttatacaagttaaaggaaatattttagaatgctcaa-gaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 343  Q
    |||| |||||||||||||||| ||||||  || ||  ||||||||| |  ||| |||  ||||||| ||||  ||||| |||| ||||||||||||   |    
T  23102207 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaggggtctcctaatgcacgaggcaac-gttcaaaaagtggctgactaaggtcaa 23102109  T
Q  344 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 420  Q
    |||||||||||||||| | |||||||||||  || |||||||||||| |||||||||| ||||||||||||||||||    
T  23102108 cttcgcttaagcgacgtccagttcgcttaagtgatcggcttacagtaagtctgggttctgctcgcttacggttcgct 23102032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 420
Target Start/End: Original strand, 21907746 - 21907852
Alignment:
Q  314 aaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttac 412  Q
    |||||||| |||| |||||||||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||| | ||  |||||| ||||||| ||    
T  21907746 aaagttcaaaaagtggctgactaagg-tcatcttcgcttaagcgatggctagttcgcttaagcgaccggcttacagaaagttggggttccgctcgctaac 21907844  T
Q  413 ggttcgct 420  Q
    ||||||||    
T  21907845 ggttcgct 21907852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 24660876 - 24661019
Alignment:
Q  245 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 343  Q
    ||||||| ||||||||||||| || |||| |||||| ||||||||| | | |||||| |||||||||| |||| |||| |||| ||||||||||| |       
T  24660876 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggatcccctagtgcacgaagtaaaa-ttcaaaaagtggctgactaagacctt 24660974  T
Q  344 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacag 388  Q
    ||| ||||||||||||||| | |||||||| ||||||||| ||||    
T  24660975 ctttgcttaagcgacggctggctcgcttaagcgaccggctcacag 24661019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 388
Target Start/End: Complemental strand, 27208417 - 27208324
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacag 388  Q
    ||||||| ||||||||| |||  ||||||||| ||||||||||||||||| ||||||||||||| || ||| |||||||| ||||| ||| ||||    
T  27208417 gtcccctagtgcacgaaacaag-gttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagctcacag 27208324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 388
Target Start/End: Complemental strand, 27210752 - 27210659
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacag 388  Q
    ||||||| ||||||||| |||  ||||||||| ||||||||||||||||| ||||||||||||| || ||| |||||||| ||||| ||| ||||    
T  27210752 gtcccctagtgcacgaaacaag-gttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagctcacag 27210659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 416 - 478
Target Start/End: Original strand, 23264551 - 23264613
Alignment:
Q  416 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 478  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||| ||||||||| || |||||    
T  23264551 tcgctaacggttcgcttgagcgaacttctgacataatgaaaatgatttttcgcttacgggttc 23264613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 23264301 - 23264388
Alignment:
Q  130 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcacca 218  Q
    |||||| ||||||||| | | ||||| |||||||| |||||||||| |||||||| ||| ||||||||  ||||| |||||||| ||||    
T  23264301 catcaagttcattcaacatagtatatgttcacttggtttcatactcgatcatctccaaa-ttcactaaactcaactaattcgattacca 23264388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 245; Significance: 1e-135; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 19 - 472
Target Start/End: Complemental strand, 29615195 - 29614738
Alignment:
Q  19 aacctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattata 117  Q
    |||||||||||||||||||||||||  ||||  |||||| |||||||||||||||| ||||| || |   |||||||||||||||||||||||| |||||    
T  29615195 aacctgtgtatatctacatacaactcgactattacatatgtttcatatgacttactgctccgcaactc--aacaatccagaacatacacaattatttata 29615098  T
Q  118 attatgcacatacatcaatttcattcaataaattatatat--------tcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaatt 209  Q
    ||||| |||||||||||||  ||||| | |  ||||||||        ||||||| ||||||||||||||||||| || ||| ||||||| ||| |||||    
T  29615097 attattcacatacatcaatcacattccacatgttatatatacacatattcacttgttttcatactcaatcatctccaacatttactaacaccaatcaatt 29614998  T
Q  210 cgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacga 309  Q
    | |||||| ||| |||||| || ||||||| ||||||| | |||||||||| |||||||||||||||| ||||||||||||||||| ||||| |||||||    
T  29614997 caatcaccggctcgttctaataagattctgttacctatgccagggttatactagttaaaggaaatattatagaatgctcaagaagttccctcatgcacga 29614898  T
Q  310 agcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgct 409  Q
    | |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  29614897 aacaaaagttcagaa---ggctgactaaggctcacttcgcttaagcgacggctagttcgcttaagcgaccgacttacagtaggtctgggttcagctcgct 29614801  T
Q  410 tacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 472  Q
    ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614800 tacgggttgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 29614738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 280 - 475
Target Start/End: Original strand, 12167637 - 12167832
Alignment:
Q  280 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 379  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  12167637 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 12167735  T
Q  380 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  12167736 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 12167832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 280 - 475
Target Start/End: Original strand, 19286546 - 19286741
Alignment:
Q  280 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 379  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  19286546 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19286644  T
Q  380 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  19286645 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 19286741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 280 - 473
Target Start/End: Original strand, 19877730 - 19877923
Alignment:
Q  280 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 379  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  19877730 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19877828  T
Q  380 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcaca 473  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  19877829 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcaca 19877923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 280 - 475
Target Start/End: Original strand, 19883506 - 19883701
Alignment:
Q  280 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 379  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||||| ||||| | ||||| ||||||||||||||||||||||||||||||||| |||||    
T  19883506 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctaattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19883604  T
Q  380 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  19883605 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 19883701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 280 - 475
Target Start/End: Complemental strand, 19786650 - 19786455
Alignment:
Q  280 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 379  Q
    |||| ||||||||||||||||| ||||  |||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  19786650 agaacgctcaagaagtcccctcatgcattaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 19786552  T
Q  380 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
     ||||||||||||| |||||||||  |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  19786551 agcttacagtaggttctgggttcacttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 19786455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 317 - 475
Target Start/End: Complemental strand, 34640733 - 34640575
Alignment:
Q  317 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtagg-tctgggttcagctcgcttacggt 415  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| |||| ||||||||||     
T  34640733 gttcagaaa-aggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacggg 34640635  T
Q  416 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  34640634 tcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagg 34640575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 317 - 475
Target Start/End: Complemental strand, 34647407 - 34647249
Alignment:
Q  317 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtagg-tctgggttcagctcgcttacggt 415  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| |||| ||||||||||     
T  34647407 gttcagaaa-aggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacggg 34647309  T
Q  416 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  34647308 tcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagg 34647249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 315 - 475
Target Start/End: Complemental strand, 25470451 - 25470290
Alignment:
Q  315 aagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt-ctgggttcagctcgcttacg 413  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||| |||||  |||||||||||| ||||| |||| |||||||||    
T  25470451 aagttcagaaaaaggctgactaaggttcacttcgcttaagcgacgtctagttcgcttaagcgaccaacttacagtaggttctgggctcagttcgcttacg 25470352  T
Q  414 gttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
    | |||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  25470351 ggtcgctcacggttcgcttgagcgaattttggacagaatcaaaatggtttttcgctcacagg 25470290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 340 - 473
Target Start/End: Complemental strand, 21365200 - 21365067
Alignment:
Q  340 ctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 439  Q
    |||| |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  21365200 ctcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaa 21365101  T
Q  440 cttctgacagaatcaaaatggtttttcgctcaca 473  Q
    |||  |||||||||||||||||||||||||||||    
T  21365100 ctttggacagaatcaaaatggtttttcgctcaca 21365067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 340 - 473
Target Start/End: Complemental strand, 23969182 - 23969049
Alignment:
Q  340 ctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 439  Q
    |||| |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  23969182 ctcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaa 23969083  T
Q  440 cttctgacagaatcaaaatggtttttcgctcaca 473  Q
    |||  |||||||||||||||||||||||||||||    
T  23969082 ctttggacagaatcaaaatggtttttcgctcaca 23969049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 104 - 420
Target Start/End: Original strand, 25396343 - 25396658
Alignment:
Q  104 cacaattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaa 203  Q
    |||||||||| ||||| || |  || |||||| |||||||||   | |||||||||||||| |||||||||||||||| || ||||||||||||  ||||    
T  25396343 cacaattaataataatcatactaatgcatcaagttcattcaacctagtatatattcacttggtttcatactcaatcatatccaaaattcactaaattcaa 25396442  T
Q  204 ccaattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcg 302  Q
    |||||||||| ||||   ||||  |||||||||| | | | ||||||||||||||||||||| || |||| |||||||||||||||| | | | |||| |    
T  25396443 ccaattcgattaccaatgtgtttcagtaggattcag-tgcatatacaagggttatacaagttgaaagaaacattttagaatgctcaaaaggattccctag 25396541  T
Q  303 tgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttca 402  Q
    ||||| ||||| || |||| |||| || |||||||| |  |||||||||||||||||||| | |||||||| |||||| |||||||   ||  ||||||     
T  25396542 tgcactaagcataa-ttcaaaaagtggttgactaagacctacttcgcttaagcgacggctggctcgcttaagcgaccgacttacagagagttggggttcc 25396640  T
Q  403 gctcgcttacggttcgct 420  Q
    ||||||| ||||||||||    
T  25396641 gctcgctaacggttcgct 25396658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 314 - 420
Target Start/End: Original strand, 18799818 - 18799924
Alignment:
Q  314 aaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacg 413  Q
    |||||||| |||| |||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  18799818 aaagttcaaaaagtggctgactaaggttgacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaagtctgggttccgctcgcttacg 18799917  T
Q  414 gttcgct 420  Q
    |||||||    
T  18799918 gttcgct 18799924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 318 - 456
Target Start/End: Complemental strand, 20008630 - 20008493
Alignment:
Q  318 ttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttc 417  Q
    |||||||| |||||| ||||  |||| ||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||    
T  20008630 ttcagaaa-aggctgtctaacactcagttcgcttaagcaacggctagttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtc 20008532  T
Q  418 gctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    |||||||| |||||| |||||| |  || ||||||||||    
T  20008531 gctcacggctcgcttaagcgaattcttggcagaatcaaa 20008493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 245 - 420
Target Start/End: Complemental strand, 21565936 - 21565761
Alignment:
Q  245 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 343  Q
    |||| |||||||||||||||| ||||||  || ||  ||||||||| | | || |||  ||||||| ||||  ||||| |||| ||||||||||||   |    
T  21565936 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaagggtctcctaatgcacgaggcaac-gttcaaaaagtggctgactaaggtcaa 21565838  T
Q  344 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 420  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  21565837 cttcgcttaagcgacgtccagttcgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacggttcgct 21565761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 253 - 445
Target Start/End: Complemental strand, 19472082 - 19471891
Alignment:
Q  253 ggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgctt 351  Q
    ||||||||||||| ||||||| |||| | ||||||||| | | |||||| ||||||||||||||| |||| |||| ||||||| ||| |   ||||||||    
T  19472082 ggttatacaagttgaaggaaacatttcaaaatgctcaaaaggatcccctagtgcacgaagcaaaa-ttcaaaaagtggctgac-aagaccttcttcgctt 19471985  T
Q  352 aagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctg 445  Q
    |||||| |||| | |||||||| ||||||||| |||| | ||  |||||| ||||||| |||| |||||  |||||||||| ||||||||||||    
T  19471984 aagcgatggctggctcgcttaagcgaccggctcacagaaagttggggttccgctcgctaacggctcgcttgcggttcgcttaagcgaacttctg 19471891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 19786866 - 19786751
Alignment:
Q  20 acctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataa 118  Q
    ||||||||||||||||||||||||  ||||| |||||| | ||||||||||||||||||| | || || ||||||||||| | |||||||||| ||||||    
T  19786866 acctgtgtatatctacatacaactcgactactacatatgtatcatatgacttactactcc-ataactcaaacaatccaga-cttacacaattatttataa 19786769  T
Q  119 ttatgcacatacatcaat 136  Q
    ||||||||||||||||||    
T  19786768 ttatgcacatacatcaat 19786751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 228 - 379
Target Start/End: Complemental strand, 19300509 - 19300359
Alignment:
Q  228 agtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaag 326  Q
    ||||||||| |||| ||||||||||||||||||||| |||| |||| | || | ||| ||||| | | |||||| |||||||||||||| ||||||| ||    
T  19300509 agtaggatt-tgatgcctatacaagggttatacaagctaaaagaaacacttaaaaatactcaaaagggtcccctagtgcacgaagcaaa-gttcagatag 19300412  T
Q  327 aggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 379  Q
    |||||||||||||||||  |||||||||||| || ||| |||||||| |||||    
T  19300411 aggctgactaaggctcatctcgcttaagcgaagggtagctcgcttaagcgacc 19300359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 12167420 - 12167535
Alignment:
Q  20 acctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataa 118  Q
    ||||||||||||||||||||||||  || || |||||| | ||||||||||||||||||| | || || ||||||||||| | |||||||||| ||||||    
T  12167420 acctgtgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaacaatccaga-cttacacaattatttataa 12167517  T
Q  119 ttatgcacatacatcaat 136  Q
    ||||||||||||||||||    
T  12167518 ttatgcacatacatcaat 12167535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 19877513 - 19877628
Alignment:
Q  20 acctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataa 118  Q
    ||||||||||||||||||||||||  || || |||||| | ||||||||||||||||||| | || || ||||||||||| | |||||||||| ||||||    
T  19877513 acctgtgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaacaatccaga-cttacacaattatttataa 19877610  T
Q  119 ttatgcacatacatcaat 136  Q
    ||||||||||||||||||    
T  19877611 ttatgcacatacatcaat 19877628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 19883289 - 19883404
Alignment:
Q  20 acctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataa 118  Q
    ||||||||||||||||||||||||  || || |||||| | ||||||||||||||||||| | || || ||||||||||| | |||||||||| ||||||    
T  19883289 acctgtgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaacaatccaga-cttacacaattatttataa 19883386  T
Q  119 ttatgcacatacatcaat 136  Q
    ||||||||||||||||||    
T  19883387 ttatgcacatacatcaat 19883404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 19286329 - 19286444
Alignment:
Q  20 acctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataa 118  Q
    ||||||||||||||||||||||||  || || |||||| | | ||||||||||||||||| | || || ||||||||||| | |||||||||| ||||||    
T  19286329 acctgtgtatatctacatacaactcgaccactacatatgtataatatgacttactactcc-acaactcaaacaatccaga-cttacacaattatttataa 19286426  T
Q  119 ttatgcacatacatcaat 136  Q
    ||||||||||||||||||    
T  19286427 ttatgcacatacatcaat 19286444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 475
Target Start/End: Complemental strand, 24513429 - 24513370
Alignment:
Q  416 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
    ||||| ||||||||||||||||||||||||  ||||| |||||| ||||||||| |||||    
T  24513429 tcgctaacggttcgcttgagcgaacttctggaagaatgaaaatgatttttcgcttacagg 24513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 302 - 440
Target Start/End: Original strand, 29097221 - 29097359
Alignment:
Q  302 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 401  Q
    ||||||||||||||| ||||||||  ||||||||||  |||| |||||||||||||||  ||| |||||||| ||||| ||| |||  ||||   ||| |    
T  29097221 gtgcacgaagcaaaa-ttcagaaaagggctgactaacactcagttcgcttaagcgacgagtagctcgcttaagcgaccagctcacacaaggttgaggtcc 29097319  T
Q  402 -agctcgcttacggttcgctcacggttcgcttgagcgaac 440  Q
      ||||||| ||||||||||| | |||||||| |||||||    
T  29097320 tcgctcgctcacggttcgctcgcagttcgcttaagcgaac 29097359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 302 - 379
Target Start/End: Complemental strand, 9099770 - 9099694
Alignment:
Q  302 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 379  Q
    ||||||||||||||| ||||||||  ||||||||||  |||| |||||||||||||||  ||| |||||||| |||||    
T  9099770 gtgcacgaagcaaaa-ttcagaaaagggctgactaacactcagttcgcttaagcgacgagtagctcgcttaagcgacc 9099694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 294 - 379
Target Start/End: Complemental strand, 11289378 - 11289294
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 379  Q
    ||||||| |||||||| ||||| |||||||||| ||||| ||||||||||  |||||||||||| || ||| | |||||| |||||    
T  11289378 gtcccctagtgcacgaggcaaa-gttcagaaaggggctggctaaggctcagctcgcttaagcgaagggtagcttgcttaagcgacc 11289294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 440
Target Start/End: Original strand, 31251879 - 31251916
Alignment:
Q  403 gctcgcttacggttcgctcacggttcgcttgagcgaac 440  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  31251879 gctcgctcacggttcgctcacagttcgcttgagcgaac 31251916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 9186841 - 9186903
Alignment:
Q  295 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgac 358  Q
    |||||| |||||||||||||| ||||| |||| |||||||||||| ||| |||||||||||||||    
T  9186841 tcccctagtgcacgaagcaaa-gttcaaaaagtggctgactaagg-tcatcttcgcttaagcgac 9186903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 223; Significance: 1e-122; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 20 - 472
Target Start/End: Complemental strand, 41456142 - 41455687
Alignment:
Q  20 acctgtgtatatctacatacaacttaactaca-catatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataa 118  Q
    |||||||||||||||||||||||| |||||   ||||| |||||||||||||||||||||| || | | |||||| |||||||| |||||||| ||||||    
T  41456142 acctgtgtatatctacatacaactcaactaatgcatatgtttcatatgacttactactccgtaact-caaacaattcagaacattcacaattatttataa 41456044  T
Q  119 ttatgcacatacatcaatttcattcaataaattatatattcacttgat-ttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcacc 217  Q
    |||||| | ||||||||||||||||||||  || ||||||||||| || ||| |||||||| ||||| || ||| ||||||| ||| |||||||||  ||    
T  41456043 ttatgcgcttacatcaatttcattcaatag-ttgtatattcacttaatcttcctactcaattatctccaacatttactaacaccaatcaattcgattgcc 41455945  T
Q  218 agcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaag 317  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||   |  ||  |||| ||||| ||||||||||| ||||| |||||| ||    
T  41455944 agcttgttctagtaggattctgatacctatactaggattatacaagttaaagaggaagttaaagaacgctcaggaagtcccctcatgcactaagcaacag 41455845  T
Q  318 ttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtagg-tctgggttcagctcgcttacggtt 416  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||| |||||||||| |    
T  41455844 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggt 41455745  T
Q  417 cgctcacggttcgcttgagcgaacttctgacagaatcaaaa--tggtttttcgctcac 472  Q
    ||||||||||||||||||||||||||  |||||||||||||  |||||||||||||||    
T  41455744 cgctcacggttcgcttgagcgaactttggacagaatcaaaaattggtttttcgctcac 41455687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 23 - 478
Target Start/End: Original strand, 18914193 - 18914646
Alignment:
Q  23 tgtgtatatctacatacaacttaactacacatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataattat 122  Q
    ||||||||||||||||||||||||| | |||||| ||||||||||||||| |||||| || ||| |||||||||||||||||||||||||||||||||||    
T  18914193 tgtgtatatctacatacaacttaacaatacatatgtttcatatgacttacaactccgcaa-ttccaacaatccagaacatacacaattaattataattat 18914291  T
Q  123 gcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagctt 222  Q
    || |||||||||||||||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||  ||  |    
T  18914292 gctcatacatcaatttcattcaacataatatatattcacttgatttcatactcaatcatctccaaaattcactaacatcaactaattccatcaatagagt 18914391  T
Q  223 gttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttca 321  Q
    ||| |||||||||| || |   |||| || |||||||||||||  | |||||||| |   |||||||| | | ||||||  ||||||| |||||| ||||    
T  18914392 gttttagtaggattatg-tgtatatataaaggttatacaagttggaagaaatattattatatgctcaaaaggatcccctaatgcacgaggcaaaaattca 18914490  T
Q  322 gaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 420  Q
     |||| |||||||||||| ||| |||||||||||||| |||  |||||||||| ||||||||||| ||   ||  |||||| ||||||| | ||||||||    
T  18914491 -aaagtggctgactaagg-tcatcttcgcttaagcgatggcaggttcgcttaagcgaccggcttatagagagttggggttccgctcgctaaaggttcgct 18914588  T
Q  421 cacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 478  Q
      |||||| ||| |||||||||||| ||||||  || || ||||||||| || |||||    
T  18914589 tgcggttcacttaagcgaacttctggcagaatggaattgatttttcgcttacgggttc 18914646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 328 - 472
Target Start/End: Original strand, 24192274 - 24192418
Alignment:
Q  328 ggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggtt 427  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  24192274 ggctgactaaggtccacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaagtctgggttcaactcacttacggttcgctcacggtt 24192373  T
Q  428 cgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 472  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  24192374 cgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 24192418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 302 - 439
Target Start/End: Original strand, 14865201 - 14865338
Alignment:
Q  302 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcga-cggctagttcgcttaatcgaccggcttacagtaggtctgggtt 400  Q
    |||||||||||||  ||||||||| |||||||||||  |||| ||||||||||||| |||||||||||||||| ||||| ||||| ||||||||||||||    
T  14865201 gtgcacgaagcaag-gttcagaaaaaggctgactaacactcagttcgcttaagcgaacggctagttcgcttaagcgaccagcttagagtaggtctgggtt 14865299  T
Q  401 cagctcgcttacggttcgctcacggttcgcttgagcgaa 439  Q
    ||| |||||||||| |||||||||| |||||| ||||||    
T  14865300 cagttcgcttacgggtcgctcacggctcgcttaagcgaa 14865338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 314 - 420
Target Start/End: Complemental strand, 16802143 - 16802037
Alignment:
Q  314 aaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacg 413  Q
    |||||||| |||| |||| |||||||   ||||||||||| |||||||||| |||||||| |||||||||||||||| |||||||||| |||||||||||    
T  16802143 aaagttcaaaaagtggctaactaaggtcaacttcgcttaaacgacggctagctcgcttaagcgaccggcttacagtaagtctgggttctgctcgcttacg 16802044  T
Q  414 gttcgct 420  Q
    |||||||    
T  16802043 gttcgct 16802037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 317 - 418
Target Start/End: Complemental strand, 55499799 - 55499698
Alignment:
Q  317 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggtt 416  Q
    ||||| |||| |||||||||||    ||||||||||||||||| ||||||||||||| |||||||||||||||| |||| ||||| ||||||||||||||    
T  55499799 gttcaaaaagtggctgactaagatcaacttcgcttaagcgacgtctagttcgcttaagcgaccggcttacagtaagtctaggttctgctcgcttacggtt 55499700  T
Q  417 cg 418  Q
    ||    
T  55499699 cg 55499698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 227 - 414
Target Start/End: Complemental strand, 13324562 - 13324376
Alignment:
Q  227 tagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaa 325  Q
    |||||||||| || ||||||||||||||||||| ||| | || |||| || || |||||||||| | | ||||||  |||||||||||||| ||||||||    
T  13324562 tagtaggatt-tgttacctatacaagggttatataagctgaaagaaacatctttgaatgctcaaaagggtcccctaatgcacgaagcaaaa-ttcagaaa 13324465  T
Q  326 gaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacgg 414  Q
    | ||||||||||||||||  |||||||||||| |||| | |||||||| |||| ||||| ||| | || ||||||  ||||||| ||||    
T  13324464 gtggctgactaaggctcagctcgcttaagcgaaggctggctcgcttaagcgactggcttgcagaaagtttgggttttgctcgctgacgg 13324376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 18136174 - 18136117
Alignment:
Q  88 aacaatccagaacatacacaattaattataattatgcacatacatcaatttcattcaa 145  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18136174 aacaatccagaacatacacaattaattataattatgctcatacatcaatttcattcaa 18136117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 227 - 358
Target Start/End: Complemental strand, 13302974 - 13302844
Alignment:
Q  227 tagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaa 325  Q
    |||||||||| || ||||||||||||||||||| ||| | || |||| || || |||||||||| | | ||||||  |||||||||||||| ||||||||    
T  13302974 tagtaggatt-tgttacctatacaagggttatataagctgaaagaaacatctttgaatgctcaaaagggtcccctaatgcacgaagcaaaa-ttcagaaa 13302877  T
Q  326 gaggctgactaaggctcacttcgcttaagcgac 358  Q
    | ||||||||||||||||  |||||||||||||    
T  13302876 gtggctgactaaggctcagctcgcttaagcgac 13302844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 362 - 478
Target Start/End: Complemental strand, 17241201 - 17241085
Alignment:
Q  362 tagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggt 461  Q
    |||||||||||| |||||| |||| ||   ||  |||||| ||||||| ||||||||||  |||||||||||||||||||||||||||||| ||| || |    
T  17241201 tagttcgcttaagcgaccgacttatagagagttggggttccgctcgctgacggttcgcttgcggttcgcttgagcgaacttctgacagaatgaaattgat 17241102  T
Q  462 ttttcgctcacaggttc 478  Q
    |||||||| || |||||    
T  17241101 ttttcgcttacgggttc 17241085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 296 - 474
Target Start/End: Complemental strand, 10415301 - 10415123
Alignment:
Q  296 cccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtagg-tc 394  Q
    ||||| ||||||||||||||| |||||||| ||| | |||||| | || ||||||||||||| ||  || |||||||| ||||| ||| |||| |   ||    
T  10415301 cccctagtgcacgaagcaaaa-ttcagaaa-aggttaactaagacccagttcgcttaagcgaagggcagctcgcttaagcgaccagct-acaggaaaatc 10415205  T
Q  395 tgggttcagct-cgcttacggttcgctcacg-gttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacag 474  Q
    | ||||||| | |||| |||||||||||||  ||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  10415204 taggttcaggttcgctcacggttcgctcacaagttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacag 10415123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 296 - 474
Target Start/End: Complemental strand, 10421971 - 10421793
Alignment:
Q  296 cccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtagg-tc 394  Q
    ||||| ||||||||||||||| |||||||| ||| | |||||| | || ||||||||||||| ||  || |||||||| ||||| ||| |||| |   ||    
T  10421971 cccctagtgcacgaagcaaaa-ttcagaaa-aggttaactaagacccagttcgcttaagcgaagggcagctcgcttaagcgaccagct-acaggaaaatc 10421875  T
Q  395 tgggttcagct-cgcttacggttcgctcacg-gttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacag 474  Q
    | ||||||| | |||| |||||||||||||  ||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  10421874 taggttcaggttcgctcacggttcgctcacaagttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacag 10421793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 363 - 456
Target Start/End: Original strand, 17131147 - 17131240
Alignment:
Q  363 agttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    |||||||||||  |||| ||||||||||||||||||||||| |||||||||| ||||||| || |||||| |||||| |  || ||||||||||    
T  17131147 agttcgcttaagtgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcatggctcgcttaagcgaattcttggcagaatcaaa 17131240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 358
Target Start/End: Complemental strand, 13313650 - 13313520
Alignment:
Q  227 tagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaa 325  Q
    |||||||||| || ||||||||||||||||||| ||| | || |||| || ||  ||||||||| | | ||||||  |||||||||||||| ||||||||    
T  13313650 tagtaggatt-tgttacctatacaagggttatataagctgaaagaaacatctttaaatgctcaaaagggtcccctaatgcacgaagcaaaa-ttcagaaa 13313553  T
Q  326 gaggctgactaaggctcacttcgcttaagcgac 358  Q
    | ||||||||||||||||  |||||||||||||    
T  13313552 gtggctgactaaggctcagctcgcttaagcgac 13313520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 405 - 474
Target Start/End: Complemental strand, 10390104 - 10390034
Alignment:
Q  405 tcgcttacggttcgctcacg-gttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacag 474  Q
    ||||| |||||||||||||  ||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  10390104 tcgctcacggttcgctcacaagttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacag 10390034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 420
Target Start/End: Complemental strand, 12034072 - 12034015
Alignment:
Q  363 agttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 420  Q
    ||||||||||| ||||| |||||||||||||||||||| || |||||||||| |||||    
T  12034072 agttcgcttaagcgaccagcttacagtaggtctgggtttagttcgcttacgggtcgct 12034015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 141
Target Start/End: Complemental strand, 18129660 - 18129607
Alignment:
Q  88 aacaatccagaacatacacaattaattataattatgcacatacatcaatttcat 141  Q
    |||||| |||||||| ||||||||||||||||||||| | ||||||||||||||    
T  18129660 aacaattcagaacattcacaattaattataattatgctcgtacatcaatttcat 18129607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 302 - 440
Target Start/End: Complemental strand, 19235767 - 19235629
Alignment:
Q  302 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 401  Q
    ||||||||||||||| ||||||||  ||||||||||  |||| |||||||||||||||  ||| |||||||| ||||| ||| |||  ||||   ||| |    
T  19235767 gtgcacgaagcaaaa-ttcagaaaagggctgactaacactcagttcgcttaagcgacgagtagctcgcttaagcgaccagctcacacaaggttgaggtcc 19235669  T
Q  402 -agctcgcttacggttcgctcacggttcgcttgagcgaac 440  Q
      ||||||| ||||||||||| | |||||||| |||||||    
T  19235668 tcgctcgctcacggttcgctcgcagttcgcttaagcgaac 19235629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 18136306 - 18136249
Alignment:
Q  23 tgtgtatatctacatacaacttaactacacatat-atttcatatgacttactactccg 79  Q
    ||||||||||||||||||||||||| |  |||||  ||||||||||||||| ||||||    
T  18136306 tgtgtatatctacatacaacttaaccatgcatatgttttcatatgacttacaactccg 18136249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 9533232 - 9533335
Alignment:
Q  93 tccagaacatacacaattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattc 192  Q
    ||||||| ||||||||||||| ||||| |  |  || ||| || ||||||||| | | ||||| |||||||  |||||||||||||||||||  ||||||    
T  9533232 tccagaaaatacacaattaatcataatcaaactaatgcataaagttcattcaacatagtatatgttcacttagtttcatactcaatcatctc-caaattc 9533330  T
Q  193 actaa 197  Q
    |||||    
T  9533331 actaa 9533335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 12034119 - 12034057
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgac 358  Q
    ||||||| |||||||||||||  |||||||||  |||||||||| ||||| ||||||||||||||    
T  12034119 gtcccctagtgcacgaagcaag-gttcagaaat-ggctgactaacgctcagttcgcttaagcgac 12034057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 18129792 - 18129736
Alignment:
Q  23 tgtgtatatctacatacaacttaactacacata-tatttcatatgacttactactcc 78  Q
    ||||||||||||||||||||||||| |  |||| | ||||||||||||||| |||||    
T  18129792 tgtgtatatctacatacaacttaaccatgcatattttttcatatgacttacaactcc 18129736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 180; Significance: 6e-97; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 19 - 472
Target Start/End: Complemental strand, 13123967 - 13123506
Alignment:
Q  19 aacctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattata 117  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||| | || || | |||| ||||||||||||||||| |||||    
T  13123967 aacctgtgtatatctacatacaactcaactactacatatatttcatatgacttaatactcc-acaactcga-caattcagaacatacacaattatttata 13123870  T
Q  118 attatgcacatacatcaatttcattca-------ataaat-tata--tattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaa 207  Q
    |||||||||||||||||||  |||||        ||| || ||||  |||||||||  || ||||| |||||| | | || ||| ||||| | ||| |||    
T  13123869 attatgcacatacatcaatcacattcctcatgttatacatatatacgtattcacttatttacatacacaatcaacaccaacatttactaataccaatcaa 13123770  T
Q  208 ttcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcac 307  Q
    | | |||||| |||||||||| |||| ||||| |||||| || | |||||||| ||||||||   |  || ||||||||||||||||||||||| |||||    
T  13123769 tccaatcaccggcttgttctaataggcttctgctacctacaccaaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcac 13123670  T
Q  308 gaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcg 407  Q
     ||| || |||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| |||    
T  13123669 taagtaatagttcagaaa-aggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcg 13123571  T
Q  408 cttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 472  Q
    ||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  13123570 cttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcac 13123506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 155 - 472
Target Start/End: Original strand, 13742860 - 13743174
Alignment:
Q  155 tattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctagtaggattctgatacctatacaaggg 254  Q
    |||||||||| |||||||| |||||| ||| || ||| ||||||| |||  ||| | |||  | ||| |||||| |||||||| | |||||| || ||||    
T  13742860 tattcacttgttttcatacacaatcacctccaacatt-actaacaccaattaatccaatcctcggctcgttctaataggattcggttacctacaccaggg 13742958  T
Q  255 ttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaag 354  Q
    |||||| ||||||| |||||||| ||||||||||||||||||||||| |||||||| |||||||||||||   |||||||||||||||||||||||||||    
T  13742959 ttatactagttaaaagaaatattatagaatgctcaagaagtcccctcatgcacgaaacaaaagttcagaa---ggctgactaaggctcacttcgcttaag 13743055  T
Q  355 cgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatc- 453  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||     
T  13743056 cgacggctagttcgcttaagcgaccggcttatagtaggtctgggttcagctcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatca 13743155  T
Q  454 aaaatggtttttcgctcac 472  Q
    ||||| |||||||||||||    
T  13743156 aaaattgtttttcgctcac 13743174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 19 - 472
Target Start/End: Complemental strand, 12710896 - 12710435
Alignment:
Q  19 aacctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattata 117  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||| | || || | |||| ||||||||||||||||| |||||    
T  12710896 aacctgtgtatatctacatacaactcaactactacatatatttcatatgacttaatactcc-ataactcga-caattcagaacatacacaattatttata 12710799  T
Q  118 attatgcacatacatcaatttcattca-------ataaat-tata--tattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaa 207  Q
    |||||||||||||||||||  |||||        ||| || ||||  |||||||||  || ||||| |||||| | | || ||| ||||| | ||| |||    
T  12710798 attatgcacatacatcaatcacattcctcatgttatacatatatacgtattcacttatttacatacacaatcaacaccaacatttactaataccaatcaa 12710699  T
Q  208 ttcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcac 307  Q
    | | |||||| ||||||| || |||| ||||  |||||| || | |||||||| ||||||||   |  || ||||||||||||||||||||||| |||||    
T  12710698 tccaatcaccggcttgttataataggcttcttctacctacaccaaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcac 12710599  T
Q  308 gaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcg 407  Q
     ||| || |||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| |||    
T  12710598 taagtaatagttcagaaa-aggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcg 12710500  T
Q  408 cttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 472  Q
    ||||| | |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||    
T  12710499 cttacaggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttggctcac 12710435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 280 - 475
Target Start/End: Original strand, 13006706 - 13006901
Alignment:
Q  280 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 379  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  13006706 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 13006804  T
Q  380 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  13006805 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 13006901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 317 - 475
Target Start/End: Complemental strand, 12591389 - 12591230
Alignment:
Q  317 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtagg-tctgggttcagctcgcttacggt 415  Q
    ||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| |||| ||||||||||     
T  12591389 gttcagaaaaacgctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggatctgggatcagttcgcttacggg 12591290  T
Q  416 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  12591289 tcgctcacggttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagg 12591230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 340 - 473
Target Start/End: Complemental strand, 3858087 - 3857953
Alignment:
Q  340 ctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 439  Q
    |||| |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  3858087 ctcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaa 3857988  T
Q  440 cttctgacagaatc-aaaatggtttttcgctcaca 473  Q
    |||   |||||||| ||||||||||||||||||||    
T  3857987 ctttgaacagaatcaaaaatggtttttcgctcaca 3857953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 318 - 456
Target Start/End: Original strand, 2464736 - 2464874
Alignment:
Q  318 ttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttc 417  Q
    |||||||| || || |||||  |||| |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| |||||||||| ||    
T  2464736 ttcagaaaaagactaactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtc 2464835  T
Q  418 gctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    |||||||||||||||| ||||||||  ||||||||||||    
T  2464836 gctcacggttcgcttgggcgaactttggacagaatcaaa 2464874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 130 - 478
Target Start/End: Original strand, 13678649 - 13678995
Alignment:
Q  130 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctag 229  Q
    |||||| ||||||||| | | ||||| |||||||| | | ||||||||||||||  ||| ||||||||  ||||| |||||||| ||||   ||||  ||    
T  13678649 catcaagttcattcaacatagtatatgttcacttggtatgatactcaatcatcttcaaa-ttcactaaactcaactaattcgattaccaaagtgtttcag 13678747  T
Q  230 taggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagag 328  Q
    |||||||| | | | |||| || |||||||||| || || |||| |||||  ||||||||| | | ||||||  ||||||| ||||| ||||| |||| |    
T  13678748 taggattcag-tgcatatataaaggttatacaaattgaaagaaacattttttaatgctcaaaaggatcccctaatgcacgaggcaaa-gttcaaaaagtg 13678845  T
Q  329 gctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggtt 427  Q
    ||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||||   ||  |||||   |||||| ||| ||||||  |||||    
T  13678846 gctgactaagg-tcatcttcgcttaagcgacggctggttcgcttaagcgaccggcttacagagagttggggtttccctcgctaacgtttcgcttgcggtt 13678944  T
Q  428 cgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 478  Q
    ||||| |||||||||||||||||||  ||||| ||||||||| || |||||    
T  13678945 cgcttaagcgaacttctgacagaatggaaatgatttttcgcttacgggttc 13678995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 302 - 456
Target Start/End: Original strand, 16090442 - 16090595
Alignment:
Q  302 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 401  Q
    |||||||||||||  ||||||||| |||||||||||  |||| |||||||||||||||||||| |||||||| |||||  ||||||||||||||||||||    
T  16090442 gtgcacgaagcaag-gttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccatcttacagtaggtctgggttc 16090540  T
Q  402 agctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    || |||||||||| |||||||||| | |||| |||||| |  || ||||||||||    
T  16090541 agttcgcttacgggtcgctcacggcttgcttaagcgaattcttggcagaatcaaa 16090595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 245 - 478
Target Start/End: Original strand, 16676623 - 16676845
Alignment:
Q  245 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 343  Q
    |||| |||||||||||||||| ||||||  || ||  ||||||||| | | ||||||  ||||||| ||||  ||||| |||| ||||||||||||   |    
T  16676623 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaagggtcccctaatgcacgaggcaac-gttcaaaaagtggctgactaaggtcaa 16676721  T
Q  344 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 443  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||| ||||||||           | |||||||||||||||| |      
T  16676722 cttcgcttaagcgacgactagttcgcttaagcgaccggcttacagtaagtctgggttccgctcgctt-----------atggttcgcttgagcgaattct 16676810  T
Q  444 tgacagaatcaaaatggtttttcgctcacaggttc 478  Q
    |||||||||||||||||||||||||| ||||||||    
T  16676811 tgacagaatcaaaatggtttttcgcttacaggttc 16676845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 245 - 478
Target Start/End: Original strand, 17650859 - 17651081
Alignment:
Q  245 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 343  Q
    |||| |||||||||||||||| ||||||  || ||  ||||||||| | | ||||||  ||||||| ||||  ||||| |||| ||||||||||||   |    
T  17650859 tatataagggttatacaagttgaaggaaccatgtttcaatgctcaaaagggtcccctaatgcacgaggcaac-gttcaaaaagtggctgactaaggtcaa 17650957  T
Q  344 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 443  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||| ||||||||           | |||||||||||||||| |      
T  17650958 cttcgcttaagcgacgactagttcgcttaagcgaccggcttacagtaagtctgggttccgctcgctt-----------atggttcgcttgagcgaattct 17651046  T
Q  444 tgacagaatcaaaatggtttttcgctcacaggttc 478  Q
    |||||||||||||||||||||||||| ||||||||    
T  17651047 tgacagaatcaaaatggtttttcgcttacaggttc 17651081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 302 - 456
Target Start/End: Complemental strand, 29181807 - 29181654
Alignment:
Q  302 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 401  Q
    |||||||||||||  ||||||||| || ||||||||  |||| || ||||||||||||||||| |||||||| |||||  ||||||||||||||||||||    
T  29181807 gtgcacgaagcaag-gttcagaaaaagactgactaacactcagtttgcttaagcgacggctagctcgcttaagcgaccatcttacagtaggtctgggttc 29181709  T
Q  402 agctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    || ||||||| || |||||||||| |||||| ||||||||  || ||||||||||    
T  29181708 agttcgcttatgggtcgctcacggctcgcttaagcgaactcttggcagaatcaaa 29181654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 344 - 456
Target Start/End: Complemental strand, 20311709 - 20311597
Alignment:
Q  344 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 443  Q
    ||||||||||||||||||||| |||||||| |||||||||| ||||| |||||||||| ||||||||||||||||||  |||||||||| |||||| |      
T  20311709 cttcgcttaagcgacggctagctcgcttaagcgaccggcttgcagtaagtctgggttctgctcgcttacggttcgcttgcggttcgcttaagcgaattct 20311610  T
Q  444 tgacagaatcaaa 456  Q
    || ||||||||||    
T  20311609 tggcagaatcaaa 20311597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 151 - 450
Target Start/End: Original strand, 46625166 - 46625464
Alignment:
Q  151 tatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctagtaggattctgatacctataca 250  Q
    |||||||||| ||| |||||||||||||||| |  |||||||||||   ||||||||||| || ||||   ||||  |||||||||  | | | |||||     
T  46625166 tatatattcatttggtttcatactcaatcatattcaaaattcactatattcaaccaattcaattaccaatgtgtttcagtaggatttag-tgcatatacc 46625264  T
Q  251 agggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgc 349  Q
    ||||| ||||||||| || |||| |||||| ||||||||| | | | |||| ||||||||| ||||| |||| | || ||||||||||| |  |||||||    
T  46625265 agggtcatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacgaaacaaaa-ttcaaagagtggctgactaagacctacttcgc 46625363  T
Q  350 ttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacag 449  Q
    ||||||||||||| | |||||||| ||||| ||||||||   ||  | |||| ||||||| | |||| |||| |||||||||| |||||||||||| |||    
T  46625364 ttaagcgacggctggctcgcttaagcgacctgcttacagagagttggcgttctgctcgctaatggtttgctcgcggttcgcttaagcgaacttctggcag 46625463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 13742686 - 13742803
Alignment:
Q  19 aacctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattata 117  Q
    |||||||||||||| ||||||||||  ||||  |||||| ||||||||||||||||||||| | || || |||||||||||||||||||||||| |||||    
T  13742686 aacctgtgtatatcaacatacaactcgactattacatatgtttcatatgacttactactcc-acaactcaaacaatccagaacatacacaattatttata 13742784  T
Q  118 attatgcacatacatcaat 136  Q
    ||||||| |||||||||||    
T  13742785 attatgctcatacatcaat 13742803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 314 - 420
Target Start/End: Complemental strand, 11390024 - 11389918
Alignment:
Q  314 aaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttac 412  Q
    |||||||| |||| |||||||||||| ||| ||||||||||||||||||||| |||||||| |||||| || |||||| |||||||||| ||||||||||    
T  11390024 aaagttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagctcgcttaagcgaccgactcacagtaagtctgggttccgctcgcttac 11389926  T
Q  413 ggttcgct 420  Q
    ||||||||    
T  11389925 ggttcgct 11389918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 410
Target Start/End: Complemental strand, 11383554 - 11383440
Alignment:
Q  295 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    |||||| |||||||| ||||| ||||| |||| |||||||||||| ||| ||||||||||||||||||||| |||||||| |||| |||| |||||| ||    
T  11383554 tcccctagtgcacgaggcaaa-gttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagctcgcttaagcgacaggctcacagtaagt 11383457  T
Q  394 ctgggttcagctcgctt 410  Q
    |||||||| ||||||||    
T  11383456 ctgggttccgctcgctt 11383440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 317 - 440
Target Start/End: Complemental strand, 14320316 - 14320192
Alignment:
Q  317 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc-agctcgcttacggt 415  Q
    ||||||||| ||||||||||||||||| ||||||||||||| || ||| |||||||| ||||||||| |||| | ||   ||| |  ||||||| || ||    
T  14320316 gttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccggctcacagaaagttgaggtcctcgctcgctcacagt 14320217  T
Q  416 tcgctcacggttcgcttgagcgaac 440  Q
    |||||||||||||||||||||||||    
T  14320216 tcgctcacggttcgcttgagcgaac 14320192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 13006489 - 13006604
Alignment:
Q  20 acctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataa 118  Q
    ||||||||||||||||||||||||  || || |||||| | | ||||||||||||||||| | || || ||||||||||| | |||||||||| ||||||    
T  13006489 acctgtgtatatctacatacaactcgaccactacatatgtataatatgacttactactcc-acaactcaaacaatccaga-cttacacaattatttataa 13006586  T
Q  119 ttatgcacatacatcaat 136  Q
    ||||||||||||||||||    
T  13006587 ttatgcacatacatcaat 13006604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 363 - 456
Target Start/End: Original strand, 2966383 - 2966476
Alignment:
Q  363 agttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    ||||||||||| ||||| ||||||||||||||||||||||| ||||||| || ||| |||||| |||||| |||||| |  || ||||||||||    
T  2966383 agttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttatgggtcgttcacggctcgcttaagcgaattcttggcagaatcaaa 2966476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 363 - 456
Target Start/End: Complemental strand, 20907086 - 20906993
Alignment:
Q  363 agttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    ||||||||||| ||||| ||||||||||||||||||||||| ||||||| | |||| |||||| |||||| |||||| |  || ||||||||||    
T  20907086 agttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttatgtttcgttcacggctcgcttaagcgaattcttggcagaatcaaa 20906993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 18607248 - 18607339
Alignment:
Q  93 tccagaacatacacaattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctc 184  Q
    ||||||| ||||||||||||| ||||| |  |  || |||||| ||||||||| | | ||||| |||||||| |||||||||||||||||||    
T  18607248 tccagaaaatacacaattaatcataatcaaactaatgcatcaagttcattcaacatagtatatgttcacttggtttcatactcaatcatctc 18607339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 147453 - 147556
Alignment:
Q  93 tccagaacatacacaattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattc 192  Q
    ||||||| ||||||||||||| ||||| |  |  || |||||| ||||||||| | | || || |||||||| |||||||||||||||||||  ||||||    
T  147453 tccagaaaatacacaattaatcataatcaaactaatgcatcaagttcattcaacatagtacatgttcacttggtttcatactcaatcatctc-caaattc 147551  T
Q  193 actaa 197  Q
    |||||    
T  147552 actaa 147556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 452
Target Start/End: Original strand, 13678982 - 13679030
Alignment:
Q  405 tcgcttacgg-ttcgctcacggttcgcttgagcgaacttctgacagaat 452  Q
    |||||||||| |||||||||||||||||||||||| | |||||||||||    
T  13678982 tcgcttacgggttcgctcacggttcgcttgagcgagcgtctgacagaat 13679030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 147
Target Start/End: Complemental strand, 16475983 - 16475929
Alignment:
Q  93 tccagaacatacacaattaattataattatgcacatacatcaatttcattcaata 147  Q
    ||||||| ||||||||||||| ||||| |||| |||||||| | |||||||||||    
T  16475983 tccagaaaatacacaattaatcataatcatgctcatacatcgagttcattcaata 16475929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 466
Target Start/End: Complemental strand, 21231582 - 21231532
Alignment:
Q  416 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttc 466  Q
    ||||| ||||||||||||||||||||||||  ||||| |||||| ||||||    
T  21231582 tcgctgacggttcgcttgagcgaacttctggtagaatgaaaatgatttttc 21231532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 420
Target Start/End: Complemental strand, 21231690 - 21231567
Alignment:
Q  295 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    |||||| |||||||| ||||| ||||| |||| ||||||| |||| ||| |||||||||||||||| | |||| |||||| ||||| ||| |||| | ||    
T  21231690 tcccctagtgcacgaggcaaa-gttca-aaagtggctgacaaagg-tcatcttcgcttaagcgacgaccagtttgcttaagcgaccagctcacagaaagt 21231594  T
Q  394 ctgggttcagctcgcttacggttcgct 420  Q
      |||||| ||||||| ||||||||||    
T  21231593 tggggttccgctcgctgacggttcgct 21231567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 441
Target Start/End: Original strand, 13664450 - 13664487
Alignment:
Q  405 tcgcttacgg-ttcgctcacggttcgcttgagcgaact 441  Q
    |||||||||| |||||||||||||||||||||||||||    
T  13664450 tcgcttacgggttcgctcacggttcgcttgagcgaact 13664487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 13318007 - 13318051
Alignment:
Q  88 aacaatccagaacatacacaattaattataattatgcacatacat 132  Q
    ||||||||||||  |||||||||||| |||||||||| |||||||    
T  13318007 aacaatccagaaattacacaattaatcataattatgcgcatacat 13318051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 20907133 - 20907071
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgac 358  Q
    ||||||| ||||||||||||| | |||||| | ||||||||||| ||||| ||||||||||||||    
T  20907133 gtcccctagtgcacgaagcaaga-ttcagata-aggctgactaacgctcagttcgcttaagcgac 20907071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 176; Significance: 1e-94; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 19 - 475
Target Start/End: Complemental strand, 8046893 - 8046420
Alignment:
Q  19 aacctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattata 117  Q
    |||||||||||||||||||||||||  ||||  |||||||||||||||||||||||||||| | || || |  |||||| | |||||||||||| |||||    
T  8046893 aacctgtgtatatctacatacaactcgactattacatatatttcatatgacttactactcc-acaactc-agtaatccaaatcatacacaattatttata 8046796  T
Q  118 attatgcacatacatcaatttcattcaa-----------------taaat-tatatattcacttgatttcatactcaatcatctcaaaaattcactaaca 199  Q
    |||||||||| ||||||||  ||||| |                 || || |||||||||||||| |||||||| |||||||||| || ||| |||||||    
T  8046795 attatgcacacacatcaatcacattccacatgttatatatatatatatatatatatattcacttgttttcatacacaatcatctccaacatttactaaca 8046696  T
Q  200 tcaaccaattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccc 299  Q
     ||| |||| | ||| || |||||||||| |||||||| | |||||| || |||||||||| ||||||||   |  || |||||||||||||||||||||    
T  8046695 ccaatcaatccaatcgccggcttgttctaataggattcggttacctacaccagggttatactagttaaagaggaagttatagaatgctcaagaagtcccc 8046596  T
Q  300 tcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggt 399  Q
    || ||||| ||| || |||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||| |||||  |||| |||||||||||||    
T  8046595 tcatgcactaagtaacagttcagaaaaaggctgactaaggctcacttcgcttaagcgacgtctagctcgcttaagcgaccaacttatagtaggtctgggt 8046496  T
Q  400 tcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
    |||| |||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  8046495 tcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagg 8046420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 317 - 475
Target Start/End: Original strand, 53483013 - 53483171
Alignment:
Q  317 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtagg-tctgggttcagctcgcttacggt 415  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||| |||||| |||| ||||||||||     
T  53483013 gttcagaaa-aggctgactaaggttcacttcgcttaagcgacggcaagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacggg 53483111  T
Q  416 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  53483112 tcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagg 53483171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 302 - 456
Target Start/End: Complemental strand, 16147529 - 16147376
Alignment:
Q  302 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 401  Q
    |||||||||||||  ||||||||| |||||||||||  |||| |||||||||||||||||||| |||||||| |||||  ||||||||||||||||||||    
T  16147529 gtgcacgaagcaag-gttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccatcttacagtaggtctgggttc 16147431  T
Q  402 agctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    || |||||||||| |||||||||| |||||| |||||| |  || ||||||||||    
T  16147430 agttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 16147376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 294 - 456
Target Start/End: Original strand, 11847453 - 11847614
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    ||||||| |||||| ||||||| |||||||||||||||||||||||||||  ||||||||||||||| |||||||||||| |||||  | ||||| | ||    
T  11847453 gtcccctagtgcacaaagcaaa-gttcagaaagaggctgactaaggctcagctcgcttaagcgacgggtagttcgcttaagcgaccaac-tacaggaagt 11847550  T
Q  394 ctgggttc-agctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
     ||| ||| ||||||||||||| ||||||||||||||||| |||||| |  || ||||||||||    
T  11847551 ttggattctagctcgcttacgggtcgctcacggttcgcttaagcgaattcttggcagaatcaaa 11847614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 478
Target Start/End: Original strand, 15407438 - 15407608
Alignment:
Q  295 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    |||||| |||||||| ||||| ||||| |||| ||||||||| || ||| |||||||||||||||||| ||||||||||| ||||||||| |||| | ||    
T  15407438 tcccctagtgcacgaggcaaa-gttca-aaagtggctgactatgg-tcatcttcgcttaagcgacggccagttcgcttaagcgaccggctcacagaaagt 15407534  T
Q  394 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 478  Q
    || ||||| ||           ||||| |||||||||||||||||||||||| ||||||||||||||||||||||| || |||||    
T  15407535 ctaggttccgc-----------tcgctgacggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgcttacgggttc 15407608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 297 - 450
Target Start/End: Original strand, 15244566 - 15244719
Alignment:
Q  297 ccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctg 396  Q
    |||| ||||||||||||||| |||| |||| ||||||||||| |   ||||| ||||||||||| |   |||||||| ||||||||||||||   ||  |    
T  15244566 ccctagtgcacgaagcaaaatttcaaaaagtggctgactaagaccttcttcgattaagcgacggttgactcgcttaagcgaccggcttacagagagttgg 15244665  T
Q  397 ggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 450  Q
     |||| ||||||| | || ||||||||||||||||| |||||||||||||||||    
T  15244666 cgttccgctcgctaatggctcgctcacggttcgcttaagcgaacttctgacaga 15244719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 328 - 420
Target Start/End: Original strand, 14486052 - 14486144
Alignment:
Q  328 ggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 420  Q
    |||||||||||||||||||||||||||||| |||| | |||||||| ||||||||||||||   || ||||||| ||||||| ||||||||||    
T  14486052 ggctgactaaggctcacttcgcttaagcgaaggctggctcgcttaagcgaccggcttacagagagtttgggttccgctcgctcacggttcgct 14486144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 450
Target Start/End: Original strand, 13887138 - 13887289
Alignment:
Q  297 ccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctg 396  Q
    |||| ||||||||||||||| |||| |||| |||| |||||| |   ||||||||||||||||||| | |||||||| ||||||||||||||   ||  |    
T  13887138 ccctagtgcacgaagcaaaa-ttca-aaagtggctaactaagaccttcttcgcttaagcgacggctggctcgcttaaacgaccggcttacagagagttgg 13887235  T
Q  397 ggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 450  Q
     |||| ||||||| | ||||||| |||||||||||| ||| |||||||||||||    
T  13887236 cgttctgctcgctaatggttcgcgcacggttcgcttaagcaaacttctgacaga 13887289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 450
Target Start/End: Original strand, 13887995 - 13888146
Alignment:
Q  297 ccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctg 396  Q
    |||| ||||||||||||||| |||| |||| |||| |||||| |   ||||||||||||||||||| | |||||||| ||||||||||||||   ||  |    
T  13887995 ccctagtgcacgaagcaaaa-ttca-aaagtggctaactaagaccttcttcgcttaagcgacggctggctcgcttaaacgaccggcttacagagagttgg 13888092  T
Q  397 ggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 450  Q
     |||| ||||||| | ||||||| |||||||||||| ||| |||||||||||||    
T  13888093 cgttctgctcgctaatggttcgcgcacggttcgcttaagcaaacttctgacaga 13888146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 14555938 - 14555881
Alignment:
Q  88 aacaatccagaacatacacaattaattataattatgcacatacatcaatttcattcaa 145  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  14555938 aacaatccagaacaaacacaattaattataattatgctcatacatcaatttcattcaa 14555881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 297 - 446
Target Start/End: Original strand, 15307471 - 15307620
Alignment:
Q  297 ccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctg 396  Q
    |||| ||||||||||||||  |||  |||| ||||||||||| |   |||||||||||||| |||| | |||||||| |||||| |||||||   ||  |    
T  15307471 ccctagtgcacgaagcaaagtttcgaaaagtggctgactaagaccttcttcgcttaagcgatggctggctcgcttaagcgaccgacttacagagagttgg 15307570  T
Q  397 ggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctga 446  Q
     |||| ||||||| | || ||||||||||||||||| |||||||||||||    
T  15307571 cgttccgctcgctaatggctcgctcacggttcgcttaagcgaacttctga 15307620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 14485975 - 14486037
Alignment:
Q  227 tagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaa 290  Q
    |||||||||| |||||||||||||||||||||||||| | || |||| ||||||||||||||||    
T  14485975 tagtaggatt-tgatacctatacaagggttatacaagctgaaagaaacattttagaatgctcaa 14486037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 294 - 373
Target Start/End: Original strand, 27905613 - 27905691
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaa 373  Q
    |||||||  |||||||||||||| ||||||||| |||||||| |||||||  |||||||||||| || ||| ||||||||    
T  27905613 gtcccctaatgcacgaagcaaaaattcagaaagtggctgact-aggctcagctcgcttaagcgaagggtagctcgcttaa 27905691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 197
Target Start/End: Original strand, 18212523 - 18212623
Alignment:
Q  96 agaacatacacaattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcact 195  Q
    |||| ||||||||||||| ||||| |  |  || |||||| ||||||||| | | ||||| |||||||| |||||||||||||||||||  |||||||||    
T  18212523 agaaaatacacaattaatcataatcaaactaatgcatcaagttcattcaacatagtatatgttcacttggtttcatactcaatcatctc-caaattcact 18212621  T
Q  196 aa 197  Q
    ||    
T  18212622 aa 18212623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 168; Significance: 9e-90; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 19 - 472
Target Start/End: Complemental strand, 9628 - 9167
Alignment:
Q  19 aacctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattata 117  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||| | || || | |||||||||||||| ||||||| |||||    
T  9628 aacctgtgtatatctacatacaactcaactactacatatatttcatatgacttaatactcc-acaactcga-caatccagaacatatacaattatttata 9531  T
Q  118 attatgcacatacatcaatttcattca-------ataaat-tata--tattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaa 207  Q
    || ||||||||||||||||  ||||||       ||| || ||||  |||||||||  |||||||| |||||| | | || ||| |||||   ||| |||    
T  9530 atcatgcacatacatcaatcacattcatcatgttatacatatatacgtattcacttattttcatacacaatcaacaccaacatttactaatgccaatcaa 9431  T
Q  208 ttcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcac 307  Q
    | |  ||||| |||||||||| |||| ||||| |||||| || | |||||||| ||||||||   |  ||  |||||||||||||||||||||| |||||    
T  9430 tccagtcaccggcttgttctaataggcttctgctacctacaccaaggttatactagttaaagaggaagttacagaatgctcaagaagtcccctcatgcac 9331  T
Q  308 gaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcg 407  Q
     ||| ||||||| ||||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| |||    
T  9330 taagtaaaagtttagaaa-aggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcg 9232  T
Q  408 cttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 472  Q
    |||| || |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  9231 cttatgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcac 9167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 168; Significance: 9e-90; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 19 - 472
Target Start/End: Original strand, 23865615 - 23866078
Alignment:
Q  19 aacctgtgtatatctacatacaacttaactaca-catatatttcatat-gacttactactccgaaaattctaacaatccagaacatacacaattaattat 116  Q
    ||||||||||||||||||||||||| |||||   |||||||||||||| |||||||||||||| || |   |||||| ||||||||||||||||| ||||    
T  23865615 aacctgtgtatatctacatacaactcaactaatgcatatatttcatattgacttactactccgtaactc--aacaattcagaacatacacaattatttat 23865712  T
Q  117 aattatgcacatacatcaatttcattcaataaattata----------tattcacttgatttcatactcaatcatctcaaaaattcactaacatcaacca 206  Q
    ||||||||||||||||||||  |||||   |  |||||          |||||||||  || ||||| ||||||   | || ||| ||||| | ||| ||    
T  23865713 aattatgcacatacatcaatcacattcctcatgttatacatatacacgtattcacttatttacatacacaatcaataccaacatttactaataccaatca 23865812  T
Q  207 attcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgca 306  Q
    || | |||||| |||||||||| |||| ||||| |||||| || | |||||||| ||||||||   |  || ||||||||||||||||||||||| ||||    
T  23865813 atccaatcaccggcttgttctaataggcttctgctacctacaccaaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgca 23865912  T
Q  307 cgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctc 406  Q
    | ||| || |||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| ||    
T  23865913 ctaagtaatagttcagaaaaaggctgactaagactcacttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttc 23866012  T
Q  407 gcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 472  Q
    |||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  23866013 gcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgatcac 23866078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 294 - 456
Target Start/End: Complemental strand, 24321376 - 24321216
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    ||||||| ||| ||||||||| | |||||||| |||||| ||||  |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  24321376 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 24321279  T
Q  394 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    |||||||||| |||||||||| |||||||||| |||||| |||||| |  || ||||||||||    
T  24321278 ctgggttcagttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 24321216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 365 - 475
Target Start/End: Original strand, 17053949 - 17054060
Alignment:
Q  365 ttcgcttaatcgaccggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggttt 463  Q
    ||||||||| ||||| ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||    
T  17053949 ttcgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggttt 17054048  T
Q  464 ttcgctcacagg 475  Q
    ||||||||||||    
T  17054049 ttcgctcacagg 17054060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 19902924 - 19902808
Alignment:
Q  19 aacctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattata 117  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||| | || ||  ||||||||||||||||||||||| |||||    
T  19902924 aacctgtgtatatctacatacaactcaactactacatatatttcatatgacttaatactcc-acaactc-gacaatccagaacatacacaattatttata 19902827  T
Q  118 attatgcacatacatcaat 136  Q
    || ||||||||||||||||    
T  19902826 atcatgcacatacatcaat 19902808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 478
Target Start/End: Original strand, 25111338 - 25111508
Alignment:
Q  295 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    |||||| |||||||| ||||| ||||| |||| ||||||||| || ||| |||||||||||||||||| ||||||||||| |||||| || |||| | ||    
T  25111338 tcccctagtgcacgaggcaaa-gttca-aaagtggctgactatgg-tcatcttcgcttaagcgacggccagttcgcttaagcgaccgactcacagaaagt 25111434  T
Q  394 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 478  Q
    |||||||| ||           ||||| |||||||||||||||||||||||| ||||||||||||||||||||||| || |||||    
T  25111435 ctgggttccgc-----------tcgctgacggttcgcttgagcgaacttctggcagaatcaaaatggtttttcgcttacgggttc 25111508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 344 - 478
Target Start/End: Complemental strand, 14057271 - 14057148
Alignment:
Q  344 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 443  Q
    ||||||||||||||||||||| |||||||| ||||||||| |||| | |||||||||| ||           ||||| |||||||||||||||||||||     
T  14057271 cttcgcttaagcgacggctagctcgcttaagcgaccggctcacagaaagtctgggttccgc-----------tcgctgacggttcgcttgagcgaactta 14057183  T
Q  444 tgacagaatcaaaatggtttttcgctcacaggttc 478  Q
    || |||||||||||||||||||| ||||| |||||    
T  14057182 tggcagaatcaaaatggtttttcactcacgggttc 14057148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 130 - 420
Target Start/End: Original strand, 18613409 - 18613695
Alignment:
Q  130 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctag 229  Q
    |||||| |||||||||   | ||||| ||||| || ||||||||||||||||||| ||| ||||||||  ||||| |||||||| ||||  |  ||| ||    
T  18613409 catcaagttcattcaacgtagtatatgttcacatggtttcatactcaatcatctccaaa-ttcactaaactcaactaattcgattaccaagtgtttc-ag 18613506  T
Q  230 taggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagag 328  Q
    |||||||| | |   |||| || ||||||||||||| || | || |||||  ||||||||||| | |||||| |||||||| ||||| ||||| |||| |    
T  18613507 taggattcag-tgtatatataaaggttatacaagttgaaaggaacatttttaaatgctcaagaggatcccctagtgcacgaggcaaa-gttca-aaagtg 18613603  T
Q  329 gctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 420  Q
    || |||||||| ||| ||||||||||||||||||| |||||||||| ||||| ||||||||   ||  |||||| ||||||| ||||||||||    
T  18613604 gccgactaagg-tcatcttcgcttaagcgacggctggttcgcttaagcgacctgcttacagagagttggggttccgctcgctaacggttcgct 18613695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 19988045 - 19987990
Alignment:
Q  90 caatccagaacatacacaattaattataattatgcacatacatcaatttcattcaa 145  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  19988045 caatccagaacatacacaattaattacaattatgctcatacatcaatttcattcaa 19987990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 20005473 - 20005423
Alignment:
Q  94 ccagaacatacacaattaattataattatgcacatacatcaatttcattca 144  Q
    |||||| ||||||||| ||| ||||| ||||||||||||||| ||||||||    
T  20005473 ccagaaaatacacaatcaatcataatcatgcacatacatcaagttcattca 20005423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 20005612 - 20005563
Alignment:
Q  23 tgtgtatatctacatacaacttaactacacatatatttcatatgacttac 72  Q
    ||||||||||||||||||||||||| |  ||||||| | |||||||||||    
T  20005612 tgtgtatatctacatacaacttaacaatgcatatatataatatgacttac 20005563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 17053780 - 17053870
Alignment:
Q  20 acctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaatta 111  Q
    ||||||||||||||||||||||||  || || |||||| | ||||||||| ||||||||| | || || |||||||||| || ||||||||||    
T  17053780 acctgtgtatatctacatacaactcgaccactacatatgtatcatatgacatactactcc-acaactcaaacaatccag-acttacacaatta 17053870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 21931018 - 21931062
Alignment:
Q  245 tatacaagggttatacaagttaaaggaaatattttagaatgctca 289  Q
    ||||||| ||||||||||||| || |||| |||||||||||||||    
T  21931018 tatacaaaggttatacaagttgaaagaaacattttagaatgctca 21931062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 166; Significance: 1e-88; HSPs: 2)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 151 - 472
Target Start/End: Original strand, 324 - 644
Alignment:
Q  151 tatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctagtaggattctgatacctataca 250  Q
    |||||||||||||| |||||||| | |||||||| || ||| ||||||| ||| |||| | |||||  |||||||||| |||||||| | |||||| ||     
T  324 tatatattcacttgttttcatacaccatcatctccaacatttactaacaccaatcaatccaatcactggcttgttctaataggattcggttacctacacc 423  T
Q  251 agggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgct 350  Q
    | |||||||| ||||||||   |  || ||||||||||||||||||||||| ||||| ||| || |||||||||| |||||||||||| |||||||||||    
T  424 aaggttatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaagtaatagttcagaaa-aggctgactaagactcacttcgct 522  T
Q  351 taagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 450  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||  ||||||    
T  523 taagcgacggctagttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgattgagcgaactttggacaga 622  T
Q  451 atcaaaatggtttttcgctcac 472  Q
    ||||||||||||||||||||||    
T  623 atcaaaatggtttttcgctcac 644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 153 - 269
Alignment:
Q  19 aacctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattata 117  Q
    ||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||| | |  || |||||||||||||||||||||||| |||||    
T  153 aacctgtgtatatctacatacaactcaactattacatatatttcatatgacttactactcc-acagctc-aacaatccagaacatacacaattatttata 250  T
Q  118 attatgcacatacatcaat 136  Q
    |||||||||| ||||||||    
T  251 attatgcacacacatcaat 269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 157; Significance: 3e-83; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 19 - 472
Target Start/End: Original strand, 110939 - 111378
Alignment:
Q  19 aacctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattata 117  Q
    ||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||| | || || | ||||||||||| |||||||||| |||||    
T  110939 aacctgtgtatatctacatacaactcaactattacatatatttcatatgacttactactcc-acaactcga-caatccagaacctacacaattatttata 111036  T
Q  118 attatgcacatacatcaatttcattcaataaattatatat--------tcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaatt 209  Q
    |||| ||||||||||||||  ||||| | |  ||||||||        ||||||| |||||||| |||||||||| || ||| ||||||| ||| ||||     
T  111037 attacgcacatacatcaatcacattccacatgttatatatatacatattcacttgttttcatacacaatcatctccaacatttactaacaccaatcaatc 111136  T
Q  210 cgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgcacga 309  Q
    | |||||| |||||||||| |||||||| | |||||| || |||||||||| |||||||||| | ||| ||||||||||||||||||||||| ||||| |    
T  111137 caatcaccggcttgttctaataggattcagttacctacaccagggttatactagttaaaggagaaattatagaatgctcaagaagtcccctcatgcacta 111236  T
Q  310 agcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgct 409  Q
    || || |||||||||| |||||||||||| |||||||||||||||                    |||||  |||||||||||| ||||||||| |||||    
T  111237 agtaatagttcagaaa-aggctgactaagactcacttcgcttaag--------------------cgaccaacttacagtaggtatgggttcagttcgct 111315  T
Q  410 tacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 472  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  111316 tacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcac 111378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 327 - 456
Target Start/End: Complemental strand, 91876 - 91747
Alignment:
Q  327 aggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggt 426  Q
    ||||| |||||  |||| |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| |||||||||| |||||||||||    
T  91876 aggctaactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggt 91777  T
Q  427 tcgcttgagcgaacttctgacagaatcaaa 456  Q
    ||||||| ||||||||  ||||||||||||    
T  91776 tcgcttgggcgaactttggacagaatcaaa 91747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 327 - 456
Target Start/End: Complemental strand, 97602 - 97473
Alignment:
Q  327 aggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggt 426  Q
    ||||| |||||  |||| |||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||| |||||||||| |||||||||||    
T  97602 aggctaactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggt 97503  T
Q  427 tcgcttgagcgaacttctgacagaatcaaa 456  Q
    ||||||| ||||||||  ||||||||||||    
T  97502 tcgcttgggcgaactttggacagaatcaaa 97473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 146; Significance: 1e-76; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 20 - 475
Target Start/End: Original strand, 23527632 - 23528099
Alignment:
Q  20 acctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataa 118  Q
    ||||||||||||||||||||||||  || || |||||| | ||||||||||||||||||| | || || || |||||||| |  ||||||||| ||||||    
T  23527632 acctgtgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaataatccaga-ctgacacaattatttataa 23527729  T
Q  119 ttatgcacatacatcaatttcattcaataaattatatat------------tcacttgatttcatactcaatcatctcaaaaattcactaacatcaacca 206  Q
    ||||||||||||||||||  ||||| | |  ||||||||            ||||||| ||||| || ||| |||||| || ||| ||||||| ||| ||    
T  23527730 ttatgcacatacatcaatcacattccacatgttatatatatacatacatattcacttgctttcacacccaaacatctccaacatttactaacaccaatca 23527829  T
Q  207 -attcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaagtcccctcgtgc 305  Q
     || | | |||| | |||||||| |||||||  | |||||| || |||||||||| ||||||||   |  ||  |||| ||||||||||||||||| |||    
T  23527830 tatccaaacaccggattgttctaataggatttggttacctacaccagggttatactagttaaagaggaagttaaagaacgctcaagaagtcccctcatgc 23527929  T
Q  306 acgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt-ctgggttcagc 404  Q
    || |||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||     
T  23527930 actaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggttctgggttcagt 23528028  T
Q  405 tcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
    |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  23528029 tcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacagg 23528099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 340 - 473
Target Start/End: Complemental strand, 28890058 - 28889925
Alignment:
Q  340 ctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 439  Q
    |||| |||||||||||||||||||  |||||||| |||||  |||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||    
T  28890058 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaa 28889959  T
Q  440 cttctgacagaatcaaaatggtttttcgctcaca 473  Q
    |||  ||||||| |||||||||||||||||||||    
T  28889958 ctttggacagaaacaaaatggtttttcgctcaca 28889925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 340 - 473
Target Start/End: Complemental strand, 28896762 - 28896629
Alignment:
Q  340 ctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 439  Q
    |||| |||||||||||||||||||  |||||||| |||||  |||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||    
T  28896762 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaa 28896663  T
Q  440 cttctgacagaatcaaaatggtttttcgctcaca 473  Q
    |||  ||||||| |||||||||||||||||||||    
T  28896662 ctttggacagaaacaaaatggtttttcgctcaca 28896629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 340 - 473
Target Start/End: Complemental strand, 28910010 - 28909877
Alignment:
Q  340 ctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 439  Q
    |||| |||||||||||||||||||  |||||||| |||||  |||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||    
T  28910010 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaa 28909911  T
Q  440 cttctgacagaatcaaaatggtttttcgctcaca 473  Q
    |||  ||||||| |||||||||||||||||||||    
T  28909910 ctttggacagaaacaaaatggtttttcgctcaca 28909877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 340 - 473
Target Start/End: Complemental strand, 28931702 - 28931569
Alignment:
Q  340 ctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 439  Q
    |||| |||||||||||||||||||  |||||||| |||||  |||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||    
T  28931702 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaa 28931603  T
Q  440 cttctgacagaatcaaaatggtttttcgctcaca 473  Q
    |||  ||||||| |||||||||||||||||||||    
T  28931602 ctttggacagaaacaaaatggtttttcgctcaca 28931569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 340 - 473
Target Start/End: Complemental strand, 28946405 - 28946272
Alignment:
Q  340 ctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaa 439  Q
    |||| |||||||||||||||||||  |||||||| |||||  |||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||    
T  28946405 ctcagttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggtctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaa 28946306  T
Q  440 cttctgacagaatcaaaatggtttttcgctcaca 473  Q
    |||  ||||||| |||||||||||||||||||||    
T  28946305 ctttggacagaaacaaaatggtttttcgctcaca 28946272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 294 - 456
Target Start/End: Original strand, 19236250 - 19236410
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    ||||||| ||| ||||||||| | |||||||| |||||  ||||  |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  19236250 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctatctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 19236347  T
Q  394 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    |||||||||| ||||||| || |||||||||| |||||| |||||| |  || ||||||||||    
T  19236348 ctgggttcagttcgcttatgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 19236410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 294 - 456
Target Start/End: Original strand, 22467130 - 22467290
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    ||||||| ||| ||||||||| | |||||||| |||||| ||||  |||| | ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  22467130 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagtacgcttaagcgacggctagttcgcttaaccgaccagcttacagtaggt 22467227  T
Q  394 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    |||||||||| ||||||| || |||||||||| |||||| |||||| |  || ||||||||||    
T  22467228 ctgggttcagttcgcttatgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 22467290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 294 - 456
Target Start/End: Original strand, 22460506 - 22460666
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    ||||||| ||| ||||||||| | |||||||| |||||| ||||  |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  22460506 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 22460603  T
Q  394 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    |||||||||  ||||||| || || ||||||| |||||| |||||| |  || ||||||||||    
T  22460604 ctgggttcaattcgcttatgggtcactcacggctcgcttaagcgaattcttggcagaatcaaa 22460666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 340 - 473
Target Start/End: Complemental strand, 28933205 - 28933070
Alignment:
Q  340 ctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtct-gggttcagctcgcttacggttcgctcacggttcgcttgagcga 438  Q
    |||| ||||||||||| |||||||  |||||||| |||||  |||||||||||||| |||||||| |||||||||| |||||||||| ||||||  ||||    
T  28933205 ctcagttcgcttaagccacggctatctcgcttaaacgaccaacttacagtaggtctggggttcagttcgcttacgggtcgctcacggctcgctttggcga 28933106  T
Q  439 acttctgacagaatc-aaaatggtttttcgctcaca 473  Q
    ||||  ||||||| | ||||||||||||||||||||    
T  28933105 actttggacagaaacaaaaatggtttttcgctcaca 28933070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 295 - 452
Target Start/End: Complemental strand, 18408647 - 18408491
Alignment:
Q  295 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcactt-cgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    |||||| |||||||| ||||| ||||| |||| |||||||||||| ||| || |||||||||||||||||||| |||||| |||||||||||||| | ||    
T  18408647 tcccctagtgcacgaggcaaa-gttcaaaaagtggctgactaagg-tcattttcgcttaagcgacggctagtttgcttaagcgaccggcttacagaaagt 18408550  T
Q  394 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaat 452  Q
      |||||| ||||||| ||||||||||  ||  |||||| |||||||||||| ||||||    
T  18408549 tggggttccgctcgctaacggttcgcttgcgactcgcttaagcgaacttctggcagaat 18408491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 294 - 440
Target Start/End: Original strand, 34829432 - 34829578
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    ||||||| |||||||||||||| ||||||||| ||| ||||||||||||| ||||||||||||| || ||| |||||||| ||||| ||| |||  ||||    
T  34829432 gtcccctagtgcacgaagcaaa-gttcagaaaaaggttgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagctcacaaaaggt 34829530  T
Q  394 ctgggttc-agctcgcttacggttcgctcacggttcgcttgagcgaac 440  Q
      ||||||  |||| || ||||||||||| | ||||||||||||||||    
T  34829531 tggggttctcgctcactcacggttcgctcgcagttcgcttgagcgaac 34829578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 22232493 - 22232436
Alignment:
Q  88 aacaatccagaacatacacaattaattataattatgcacatacatcaatttcattcaa 145  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  22232493 aacaatccagaacatacacgattaattataattatgctcatacatcaatttcattcaa 22232436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 405 - 475
Target Start/End: Original strand, 20819618 - 20819689
Alignment:
Q  405 tcgcttacggttcgctcacg-gttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
    ||||| |||||||||||||  ||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  20819618 tcgctcacggttcgctcacaagttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagg 20819689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 405 - 475
Target Start/End: Original strand, 20826718 - 20826789
Alignment:
Q  405 tcgcttacggttcgctcacg-gttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
    ||||| |||||||||||||  ||||||||||||||| ||  |||||||||||||||||||||||||||||||    
T  20826718 tcgctcacggttcgctcacaagttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagg 20826789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 440
Target Start/End: Original strand, 20781102 - 20781240
Alignment:
Q  302 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 401  Q
    ||||||||||||||| |||||||| |||||||||||  || | |||||||||||||||| ||| |||||||| ||||| ||| |||  ||||   ||| |    
T  20781102 gtgcacgaagcaaaa-ttcagaaaaaggctgactaacacttagttcgcttaagcgacgggtagctcgcttaagcgaccagctcacacaaggttgaggtcc 20781200  T
Q  402 -agctcgcttacggttcgctcacggttcgcttgagcgaac 440  Q
      ||||||| ||||||||||| | |||||||| |||||||    
T  20781201 tcgctcgctcacggttcgctcgcagttcgcttaagcgaac 20781240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 302 - 440
Target Start/End: Original strand, 20772327 - 20772465
Alignment:
Q  302 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 401  Q
    ||||||||||||||  ||||||||  ||||||||||  |||| |||||||||||||||| ||| |||||||| ||||| ||| |||  ||||   ||| |    
T  20772327 gtgcacgaagcaaat-ttcagaaaagggctgactaacactcagttcgcttaagcgacgggtagctcgcttaagcgaccagctcacacaaggttgaggtcc 20772425  T
Q  402 -agctcgcttacggttcgctcacggttcgcttgagcgaac 440  Q
      ||||||| ||||||||||| | |||||||| |||||||    
T  20772426 tcgctcgctcacggttcgctcgcagttcgcttaagcgaac 20772465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 302 - 440
Target Start/End: Complemental strand, 24930627 - 24930489
Alignment:
Q  302 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 401  Q
    ||||||||||||||| ||||||||  ||||||||||  |||| |||||||||||||||  ||| |||||||| ||||| ||| |||  ||||   ||| |    
T  24930627 gtgcacgaagcaaaa-ttcagaaaagggctgactaacactcagttcgcttaagcgacgagtagctcgcttaagcgaccagctcacacaaggttgaggtcc 24930529  T
Q  402 -agctcgcttacggttcgctcacggttcgcttgagcgaac 440  Q
      ||||||| ||||||||||| | |||||||| |||||||    
T  24930528 tcgctcgctcacggttcgctcgcagttcgcttaagcgaac 24930489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 368 - 417
Target Start/End: Complemental strand, 22439370 - 22439321
Alignment:
Q  368 gcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttc 417  Q
    |||||| |||||||||||||||| |||||||||| ||||||||| |||||    
T  22439370 gcttaagcgaccggcttacagtaagtctgggttctgctcgcttaaggttc 22439321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 23112546 - 23112480
Alignment:
Q  130 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaa 197  Q
    |||||| ||||||||| | | ||||| |||||||| |||||||||||||||||||  |||||||||||    
T  23112546 catcaagttcattcaacatagtatatgttcacttggtttcatactcaatcatctc-caaattcactaa 23112480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 22232625 - 22232568
Alignment:
Q  23 tgtgtatatctacatacaacttaactacacatat-atttcatatgacttactactccg 79  Q
    ||||||||||||||||||||||||| |  |||||  ||||||||||||||| ||||||    
T  22232625 tgtgtatatctacatacaacttaacaatgcatatgttttcatatgacttacgactccg 22232568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 144; Significance: 2e-75; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 191 - 475
Target Start/End: Original strand, 241 - 504
Alignment:
Q  191 tcactaacatcaaccaattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaa 290  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||| || |||||||||||||||||||||    
T  241 tcactaacatcaaccaattcgatcaccagcgtgttctagtaggattctgatacctatacaaagtttatacaagttgaaagaaatattttagaatgctcaa 340  T
Q  291 gaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagta 390  Q
    || ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||                    |||| ||||||||| |    
T  341 gatgtccccttgtgcacgaagcaaaa-ttcagaaagaggctgactaaggttcacttcgcttaag--------------------cgactggcttacagaa 419  T
Q  391 ggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
     |||||||||| ||||||||| |||||| |  |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  420 agtctgggttctgctcgcttagggttcgtttgcggttcgcttaagcgaacttctgacagaatcaaaatggtttttcgctcacagg 504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 191 - 475
Target Start/End: Original strand, 7386 - 7649
Alignment:
Q  191 tcactaacatcaaccaattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaa 290  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||| || |||||||||||||||||||||    
T  7386 tcactaacatcaaccaattcgatcaccagcgtgttctagtaggattctgatacctatacaaagtttatacaagttgaaagaaatattttagaatgctcaa 7485  T
Q  291 gaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagta 390  Q
    || ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||                    |||| ||||||||| |    
T  7486 gatgtccccttgtgcacgaagcaaaa-ttcagaaagaggctgactaaggttcacttcgcttaag--------------------cgactggcttacagaa 7564  T
Q  391 ggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
     |||||||||| ||||||||| |||||| |  |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7565 agtctgggttctgctcgcttagggttcgtttgcggttcgcttaagcgaacttctgacagaatcaaaatggtttttcgctcacagg 7649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 129; Significance: 2e-66; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 328 - 472
Target Start/End: Complemental strand, 15121 - 14977
Alignment:
Q  328 ggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggtt 427  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15121 ggctgactaaggtccacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaagtctgggttcagctcgcttacggttcgctcacggtt 15022  T
Q  428 cgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 472  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  15021 cgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 14977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 3e-65; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 280 - 473
Target Start/End: Original strand, 41111214 - 41111407
Alignment:
Q  280 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 379  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  41111214 agaacgctcaagaagtcccctcatgcactaagcaacagttcagaaa-aggctgattaaggttcacttcgcttaagcgacggctagttcgcttaagcgacc 41111312  T
Q  380 ggcttacagtaggt-ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcaca 473  Q
     ||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  41111313 agcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcaca 41111407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 294 - 456
Target Start/End: Original strand, 21705625 - 21705785
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    ||||||| ||| ||||||||| | |||||||| |||||| ||||  |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  21705625 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 21705722  T
Q  394 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    |||||||||| |||||||||| |||||||||| |||||| |||||| |  || ||||||||||    
T  21705723 ctgggttcagttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 21705785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 294 - 456
Target Start/End: Original strand, 21710167 - 21710328
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    ||||||| ||| ||||||||| | ||| |||| |||||| ||||  |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  21710167 gtcccctagtgtacgaagcaaga-ttcggaaaaaggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 21710265  T
Q  394 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    |||||||||| ||||||| ||||||||||||| |||||| |||||| |  || ||||||||||    
T  21710266 ctgggttcagttcgcttatggttcgctcacggctcgcttaagcgaattcttggcagaatcaaa 21710328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 294 - 456
Target Start/End: Complemental strand, 20851838 - 20851678
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    ||||||| ||| ||||||||| | |||||||| |||||| ||||  |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  20851838 gtcccctagtgtacgaagcaaga-ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggt 20851741  T
Q  394 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    |||||||||| ||||||| || |||||||||| |||||| |||||| |  || ||||||||||    
T  20851740 ctgggttcagttcgcttatgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 20851678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 318 - 456
Target Start/End: Complemental strand, 20858442 - 20858305
Alignment:
Q  318 ttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttc 417  Q
    |||||||| |||||| ||||  |||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||    
T  20858442 ttcagaaa-aggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtc 20858344  T
Q  418 gctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    |||||||| |||||| |||||| |  || ||||||||||    
T  20858343 gctcacggctcgcttaagcgaattcttggcagaatcaaa 20858305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 228 - 441
Target Start/End: Original strand, 19961472 - 19961684
Alignment:
Q  228 agtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaag 326  Q
    ||||||||| |||| ||||||||||||||||||||| |||| |||| |  | | ||| ||||| | | |||||| |||||||||||||| ||||||| ||    
T  19961472 agtaggatt-tgatgcctatacaagggttatacaagctaaaagaaacacgtaaaaatactcaaaagggtcccctagtgcacgaagcaaa-gttcagatag 19961569  T
Q  327 aggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc-agctcgcttacggttcgctcacgg 425  Q
    |||||||||||||||||  |||||||||||| || ||| |||||||| ||||| || ||||| | || ||| |||  ||||||| ||||||||||  |||    
T  19961570 aggctgactaaggctcatctcgcttaagcgaagggtagctcgcttaagcgaccagc-tacaggaagtttggattctcgctcgctcacggttcgcttgcgg 19961668  T
Q  426 ttcgcttgagcgaact 441  Q
    |||||| |||||||||    
T  19961669 ttcgctcgagcgaact 19961684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 420
Target Start/End: Original strand, 18712098 - 18712223
Alignment:
Q  295 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    |||||| |||||||| ||||||||||| || | |||||||||||| ||| |||||||||||||||||||||||||||||| ||||| |||||||| | ||    
T  18712098 tcccctagtgcacgaggcaaaagttcaaaaggtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgaccagcttacagaaagt 18712196  T
Q  394 ctgggttcagctcgcttacggttcgct 420  Q
      |||||| ||||||| ||||| ||||    
T  18712197 tggggttccgctcgctaacggtacgct 18712223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 20941714 - 20941657
Alignment:
Q  88 aacaatccagaacatacacaattaattataattatgcacatacatcaatttcattcaa 145  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20941714 aacaatccagaacatacacaattaattataattatgctcatacatcaatttcattcaa 20941657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 41110997 - 41111112
Alignment:
Q  20 acctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattataa 118  Q
    ||||||||||||||||||||||||  || || |||||| | ||||||||||||||||||| | || || ||||||||||| | |||||||||| ||||||    
T  41110997 acctgtgtatatctacatacaactcgaccactacatatgtatcatatgacttactactcc-acaactcaaacaatccaga-cttacacaattatttataa 41111094  T
Q  119 ttatgcacatacatcaat 136  Q
    ||||||||||||||||||    
T  41111095 ttatgcacatacatcaat 41111112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 245 - 450
Target Start/End: Complemental strand, 22030504 - 22030298
Alignment:
Q  245 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 343  Q
    ||||||| ||||||||||||| || |||| ||| |||||||||||| | | |  ||| ||||| ||||||||| || | |||| ||||||||||| |       
T  22030504 tatacaaaggttatacaagttgaaagaaacattatagaatgctcaaaaggatttcctagtgcaagaagcaaaaattaa-aaagtggctgactaagacctt 22030406  T
Q  344 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacgg-ttcgctcacggttcgcttgagcgaactt 442  Q
    |||||||||||||| |||| | |||||||| |||| |||||||||   ||  | |||| ||||||| | || |||||||||||||||||  |||||||||    
T  22030405 cttcgcttaagcgaaggctggctcgcttaagcgactggcttacagagagttggtgttctgctcgctaagggtttcgctcacggttcgctcaagcgaactt 22030306  T
Q  443 ctgacaga 450  Q
    ||| ||||    
T  22030305 ctggcaga 22030298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 358
Target Start/End: Original strand, 11157328 - 11157554
Alignment:
Q  130 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctag 229  Q
    |||||| ||||||||| | | ||||| |||||||| ||||||||||||||||||   |||||||||||  || || |||||||| ||||   ||||  ||    
T  11157328 catcaagttcattcaacatagtatatgttcacttggtttcatactcaatcatct-tcaaattcactaaactcgactaattcgattaccaaagtgtttcag 11157426  T
Q  230 taggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagag 328  Q
    ||||||| |  |   |||| |||||||||||||||| || |||| |||||  ||||||||| | | ||||||  ||||||| || |||||||| |||| |    
T  11157427 taggatt-tagtgtatatataagggttatacaagttgaaagaaacatttttaaatgctcaaaaggatcccctaatgcacgaggc-aaagttcaaaaagtg 11157524  T
Q  329 gctgactaaggctca-cttcgcttaagcgac 358  Q
    | ||||||||| ||| |||||||||||||||    
T  11157525 gttgactaagg-tcatcttcgcttaagcgac 11157554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 20438327 - 20438224
Alignment:
Q  93 tccagaacatacacaattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattc 192  Q
    ||||||| ||||||||||||| ||||| |  |  || ||| || ||||||||| | | ||||| |||||||| |||||||||||||||||||  ||||||    
T  20438327 tccagaaaatacacaattaatcataatcaaactaatgcataaagttcattcaacatagtatatgttcacttggtttcatactcaatcatctc-caaattc 20438229  T
Q  193 actaa 197  Q
    |||||    
T  20438228 actaa 20438224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 23631145 - 23631200
Alignment:
Q  23 tgtgtatatctacatacaacttaactacacatatatttcatatgacttactactcc 78  Q
    ||||||||||||||||||||||||| |  ||||||| | ||||||||||| |||||    
T  23631145 tgtgtatatctacatacaacttaacaatgcatatatataatatgacttacaactcc 23631200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 20941846 - 20941789
Alignment:
Q  23 tgtgtatatctacatacaacttaactacacatat-atttcatatgacttactactccg 79  Q
    ||||||||||||||||||||||||| |  |||||  ||||||||||||||| ||||||    
T  20941846 tgtgtatatctacatacaacttaacaatgcatatgttttcatatgacttacaactccg 20941789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 93; Significance: 5e-45; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 132 - 451
Target Start/End: Complemental strand, 82082 - 81764
Alignment:
Q  132 tcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctagta 231  Q
    |||| ||||||||| | | |||||||||||||| |||||||||||| ||| || ||||||||||||  |||||||||||||  ||||   ||||  ||||    
T  82082 tcaagttcattcaacataatatatattcacttggtttcatactcaaacatatccaaaattcactaaattcaaccaattcgactaccaatgtgtttaagta 81983  T
Q  232 ggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggc 330  Q
    |||||| | | | ||||||||||||||||||||| || |||| |||||| ||||||||| | | | |||| ||| ||||||||||| |||| |||| |||    
T  81982 ggattcag-tgcatatacaagggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctggtgtacgaagcaaaa-ttcaaaaagtggc 81885  T
Q  331 tgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgc 430  Q
    |||||||| |  |||||||||||||||||||| | |||||||| |||||| |||||||   ||   ||||  ||||||| || ||||||| |||||||||    
T  81884 tgactaagacctacttcgcttaagcgacggctggctcgcttaagcgaccgacttacagagagttgaggtttcgctcgctaacagttcgcttacggttcgc 81785  T
Q  431 ttgagcgaacttctgacagaa 451  Q
    || |||||||||||| |||||    
T  81784 ttaagcgaacttctggcagaa 81764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 302 - 456
Target Start/End: Complemental strand, 80189 - 80036
Alignment:
Q  302 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc 401  Q
    |||||||||||||  ||||||||| |||||||||||  |||| |||||||||||||||||||| |||||||| |||||  ||||||||||||||||||||    
T  80189 gtgcacgaagcaag-gttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccatcttacagtaggtctgggttc 80091  T
Q  402 agctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    || |||||||||| |||||||||| |||||| |||||| |  || ||||||||||    
T  80090 agttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 80036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 7667 - 7517
Alignment:
Q  88 aacaatccagaacatacacaattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaa 187  Q
    ||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||| | | |||||||||||||||||||||||||||||||||| ||    
T  7667 aacaacccagaacatacccaattaattataattatgctcatacatcaatttcattcaacatactatatattcacttgatttcatactcaatcatctccaa 7568  T
Q  188 aattcactaacatcaaccaattcgatcaccagcttgttctagtaggattctg 239  Q
    ||||||||||| ||||| |||||||||||| |  | || |||||||||||||    
T  7567 aattcactaac-tcaactaattcgatcaccggagtattttagtaggattctg 7517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 7798 - 7742
Alignment:
Q  23 tgtgtatatctacatacaacttaactacacatatatttcatatgacttactactccg 79  Q
    ||||||||||||||||||||||||| |  ||||| ||||||||||||| | ||||||    
T  7798 tgtgtatatctacatacaacttaacaatgcatatgtttcatatgacttgcaactccg 7742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 240 - 420
Target Start/End: Original strand, 30194 - 30374
Alignment:
Q  240 atacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaag 338  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||| | | |||||| ||||||||||||||| ||||||||| |||||||||||    
T  30194 atacctatacaagggttatacaagttgaaagaaacattttagaatgctcaaaagggtcccctagtgcacgaagcaaaa-ttcagaaagtggctgactaag 30292  T
Q  339 gctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 420  Q
    ||||||||||||||||||| || | | |||||||| |||||||||||||| | || | ||||  ||||||| ||||||||||    
T  30293 gctcacttcgcttaagcgaaggttggctcgcttaagcgaccggcttacagaaagtttaggtttcgctcgctcacggttcgct 30374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 294 - 456
Target Start/End: Complemental strand, 4377 - 4217
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    ||||||| ||||||||||||| | |||||||| ||||||||||| ||||| ||||||||||||| ||||||||||||||| ||||| |||||||||||||    
T  4377 gtcccctagtgcacgaagcaaga-ttcagaaa-aggctgactaacgctcagttcgcttaagcgatggctagttcgcttaagcgaccagcttacagtaggt 4280  T
Q  394 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    |||||||||| |||||||||| |||||||||| |||||| |||||| |  || ||||||||||    
T  4279 ctgggttcagttcgcttacgggtcgctcacggctcgcttaagcgaattcttggcagaatcaaa 4217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 314 - 475
Target Start/End: Original strand, 10679 - 10829
Alignment:
Q  314 aaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacg 413  Q
    |||||||| |||| |||||||||||    |||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||| ||||||||       
T  10679 aaagttcaaaaagtggctgactaagatcaacttcgcttaagcgacggctagctcgcttaagcgaccggcttacagtaagtctgggttctgctcgctt--- 10775  T
Q  414 gttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 475  Q
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10776 --------agggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagg 10829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 369 - 472
Target Start/End: Complemental strand, 1446 - 1343
Alignment:
Q  369 cttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgc 468  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||  |||||||||||||| |||||||||    
T  1446 cttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaattgtttttcgc 1347  T
Q  469 tcac 472  Q
    ||||    
T  1346 tcac 1343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 130 - 478
Target Start/End: Original strand, 542 - 888
Alignment:
Q  130 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctag 229  Q
    |||||| ||||||||| | | ||||| |||||||| | | ||||||||||||||  ||| ||||||||  ||||| |||||||| ||||   ||||  ||    
T  542 catcaagttcattcaacatagtatatgttcacttggtatgatactcaatcatcttcaaa-ttcactaaactcaactaattcgattaccaaagtgtttcag 640  T
Q  230 taggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagag 328  Q
    |||||||| | | | |||| || |||||||||| || || |||| |||||  ||||||||| | | ||||||  ||||||| ||||| ||||| |||| |    
T  641 taggattcag-tgcatatataaaggttatacaaattgaaagaaacattttttaatgctcaaaaggatcccctaatgcacgaggcaaa-gttcaaaaagtg 738  T
Q  329 gctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggtt 427  Q
    ||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||||   ||  |||||   |||||| ||| ||||||  |||||    
T  739 gctgactaagg-tcatcttcgcttaagcgacggctggttcgcttaagcgaccggcttacagagagttggggtttccctcgctaacgtttcgcttgcggtt 837  T
Q  428 cgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 478  Q
    ||||| |||||||||||||||||||  ||||| ||||||||| || |||||    
T  838 cgcttaagcgaacttctgacagaatggaaatgatttttcgcttacgggttc 888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 452
Target Start/End: Original strand, 875 - 923
Alignment:
Q  405 tcgcttacgg-ttcgctcacggttcgcttgagcgaacttctgacagaat 452  Q
    |||||||||| |||||||||||||||||||||||| | |||||||||||    
T  875 tcgcttacgggttcgctcacggttcgcttgagcgagcgtctgacagaat 923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 75; Significance: 3e-34; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 105 - 418
Target Start/End: Original strand, 65265 - 65577
Alignment:
Q  105 acaattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaac 204  Q
    ||||||||| ||||| || |  || |||||| ||||||||| | | |||||||||||||| |||||||||||||||  || ||||||||||||  | |||    
T  65265 acaattaataataatcatactaatgcatcaagttcattcaacatagtatatattcacttggtttcatactcaatcaaatccaaaattcactaaacttaac 65364  T
Q  205 caattcgatcaccagcttgttctagtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgt 303  Q
    ||||||||| ||||   |||| ||||||||||| | | | |||| ||  |||||||||||| || |||| |||||| |||| |||| | | |||||| ||    
T  65365 caattcgattaccaatgtgttttagtaggattcag-tgcatatataaaagttatacaagttgaaagaaacattttaaaatgttcaaaaggatcccctagt 65463  T
Q  304 gcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcag 403  Q
    |||||| |||||| |||| |||| ||||||||||||    || |||||||| ||||||| |||||||||| ||||||||||||||   ||  |||||| |    
T  65464 gcacgaggcaaaa-ttcaaaaagtggctgactaaggtcttctccgcttaagtgacggctggttcgcttaagcgaccggcttacagagagttggggttccg 65562  T
Q  404 ctcgcttacggttcg 418  Q
    |||||| ||||||||    
T  65563 ctcgctaacggttcg 65577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 1467 - 1572
Alignment:
Q  345 ttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttct 444  Q
    ||||||||||||| |||| | |||||||| ||||||||| ||||   ||  |||||| |||||||   || ||||||||||||||||| || ||||||||    
T  1467 ttcgcttaagcgaaggctggctcgcttaagcgaccggctgacagagagttggggttccgctcgctactggctcgctcacggttcgcttaagtgaacttct 1566  T
Q  445 gacaga 450  Q
    ||||||    
T  1567 gacaga 1572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 1274 - 1336
Alignment:
Q  151 tatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgat 213  Q
    ||||| |||||||| |||||||||||||||| || |||| |||||||  ||||||||||||||    
T  1274 tatatgttcacttggtttcatactcaatcatatccaaaactcactaaattcaaccaattcgat 1336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 73; Significance: 4e-33; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 130 - 388
Target Start/End: Original strand, 116052 - 116308
Alignment:
Q  130 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctag 229  Q
    |||||| ||||||||| | | ||||| |||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||| ||||   ||||  ||    
T  116052 catcaagttcattcaacatagtatatgttcacttgatttcatactcaatcatctcaaaa-ttcactaaactcaactaattcgattaccaaggtgtttcag 116150  T
Q  230 taggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagag 328  Q
    |||||||| | |   |||| || ||||||||| ||| || |||| |||||| ||| ||||| | | |||||| |||||||| ||||| ||||| |||  |    
T  116151 taggattcag-tgtgtatataaaggttatacaggttgaaagaaacattttaaaatactcaaaaggatcccctagtgcacgaggcaaa-gttcaaaaaatg 116248  T
Q  329 gctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacag 388  Q
    ||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||||    
T  116249 gctgactaagg-tcatcttcgcttaagcgacggctggttcgcttaagcgaccggcttacag 116308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 245 - 420
Target Start/End: Complemental strand, 129393 - 129217
Alignment:
Q  245 tatacaagggttatacaagttaaaggaaatattttagaa-tgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctc 342  Q
    ||||||| ||||||||||||| ||||||| |||| | || ||||||| | | |||||| ||||||||||||||| |||| |||| ||||||||||| |      
T  129393 tatacaaaggttatacaagttgaaggaaacatttcaaaaatgctcaaaaggatcccctagtgcacgaagcaaaa-ttcaaaaagtggctgactaagacct 129295  T
Q  343 acttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 420  Q
     ||||||||||||||||||| | |||||||| ||||||||| |||| | ||  |||||| ||||||| ||||||||||    
T  129294 tcttcgcttaagcgacggctggctcgcttaagcgaccggctcacagaaagttggggttccgctcgctaacggttcgct 129217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 478
Target Start/End: Original strand, 116325 - 116388
Alignment:
Q  416 tcgctcacggttcgcttgagcgaacttctgacagaat-caaaatggtttttcgctcacaggttc 478  Q
    ||||| |||||||||||||||||||||||||||||||  |||||| ||||||||| || |||||    
T  116325 tcgctaacggttcgcttgagcgaacttctgacagaatgaaaaatgatttttcgcttacgggttc 116388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 245 - 450
Target Start/End: Original strand, 1117 - 1322
Alignment:
Q  245 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 343  Q
    ||||||| ||||||||||||| || |||| |||||| ||||||||| | | |||||| ||||||||||||||| |||| |||| ||||||||||| | |     
T  1117 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggatcccctagtgcacgaagcaaaa-ttcaaaaagtggctgactaagaccct 1215  T
Q  344 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 443  Q
    ||||||||||||||||||| | |||||||| ||||||||| ||||   ||  || ||| ||||||| | || ||  ||||||||||||| ||||||||||    
T  1216 cttcgcttaagcgacggctggctcgcttaagcgaccggctcacagagagttgggtttccgctcgctaatggctcaatcacggttcgcttaagcgaacttc 1315  T
Q  444 tgacaga 450  Q
    |||||||    
T  1316 tgacaga 1322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 295 - 478
Target Start/End: Original strand, 16121 - 16303
Alignment:
Q  295 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    |||||| |||||||| ||||| ||||| |||| |||||||||||| ||| ||||||||||||||||| ||| |||||||| |||||||||||||| | ||    
T  16121 tcccctagtgcacgaggcaaa-gttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggttagctcgcttaagcgaccggcttacagaaagt 16218  T
Q  394 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 478  Q
      |||||| ||||||| ||||||||||  ||||||| || ||||||||||||||| ||| ||| || ||||||||| || |||||    
T  16219 tggggttccgctcgctaacggttcgcttgcggttcggttaagcgaacttctgacataatgaaattgatttttcgcttacgggttc 16303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 67; Significance: 2e-29; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 228 - 440
Target Start/End: Complemental strand, 493800 - 493588
Alignment:
Q  228 agtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaag 326  Q
    ||||||||| |||| |||||||||| |||||||||| |||| |||| |||| | ||| ||||| | | |||||| |||||||||||||  |||||||||     
T  493800 agtaggatt-tgatgcctatacaagagttatacaagctaaaagaaacatttaaaaatactcaaaagggtcccctagtgcacgaagcaag-gttcagaaaa 493703  T
Q  327 aggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc-agctcgcttacggttcgctcacgg 425  Q
    ||||||||||||||||| ||||||||||||| || ||| |||||||| ||||| ||  |||  ||||   |||||  ||||||| ||||||||||||| |    
T  493702 aggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagcacacaaaaggttgaggttctcgctcgctcacggttcgctcacag 493603  T
Q  426 ttcgcttgagcgaac 440  Q
    |||||||||||||||    
T  493602 ttcgcttgagcgaac 493588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 174557 - 174440
Alignment:
Q  19 aacctgtgtatatctacatacaacttaactac-acatatatttcatatgacttactactccgaaaattctaacaatccagaacatacacaattaattata 117  Q
    ||||| ||||| ||||||||||| |  ||||  |||||| ||||| |||||||||| ||||| || | | |||||||||||||||||||||||| |||||    
T  174557 aacctttgtatctctacatacaattcgactattacatatttttcaaatgacttactgctccgcaact-caaacaatccagaacatacacaattatttata 174459  T
Q  118 attatgcacatacatcaat 136  Q
    |||||||||||||||||||    
T  174458 attatgcacatacatcaat 174440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 388
Target Start/End: Original strand, 525062 - 525204
Alignment:
Q  245 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag--tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctc 342  Q
    ||||||| ||||||||||||| || |||| |||| |||||||||| || |  | |||| ||||| ||| |||||  ||| || | ||||||| |||||      
T  525062 tatacaaaggttatacaagttgaaagaaacatttcagaatgctca-gatggattccctagtgcaggaaacaaaa--tcaaaatgtggctgaccaaggcct 525158  T
Q  343 acttcgcttaagcgacggctagttcgcttaatcgaccggcttacag 388  Q
     |||||||||||||| |||| |||||||||| |||||| |||||||    
T  525159 tcttcgcttaagcgaaggctggttcgcttaagcgaccgtcttacag 525204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 317 - 439
Target Start/End: Complemental strand, 3976 - 3854
Alignment:
Q  317 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggtt 416  Q
    ||||| |||| ||||||||||||   ||||||||||||||||| ||||||||||||| |||||||||||||||  |||||||||| ||||  ||||||||    
T  3976 gttcaaaaagtggctgactaaggtcaacttcgcttaagcgacgtctagttcgcttaagcgaccggcttacagtgagtctgggttctgctcaattacggtt 3877  T
Q  417 cgctcacggttcgcttgagcgaa 439  Q
    ||||  |||||||||| ||||||    
T  3876 cgcttgcggttcgcttaagcgaa 3854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 245 - 450
Target Start/End: Complemental strand, 19166 - 18961
Alignment:
Q  245 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 343  Q
    ||||||| ||||||| ||||| || |||| |||||| ||||||||| | | |||||| ||||||||||||||| |||| |||| ||||||||||| | |     
T  19166 tatacaaaggttatataagttgaaagaaacattttaaaatgctcaaaaggatcccctagtgcacgaagcaaaa-ttcaaaaagtggctgactaagaccct 19068  T
Q  344 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttc 443  Q
    ||||||||| | ||||||| | ||| |||| |||| |||| ||||   ||  |||||| ||||||| | || ||||||||||||||||| ||||||||||    
T  19067 cttcgcttaggagacggctggctcggttaagcgactggctcacagacagttggggttccgctcgctaatggctcgctcacggttcgcttaagcgaacttc 18968  T
Q  444 tgacaga 450  Q
    |||||||    
T  18967 tgacaga 18961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 276 - 440
Target Start/End: Original strand, 17497 - 17661
Alignment:
Q  276 ttttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaat 374  Q
    ||||||||||||||| | | || ||| ||||||||| ||||| ||||||||| ||||||| |||||||||||||||||||||| |||| | ||||||||     
T  17497 ttttagaatgctcaaaaggctcgcctagtgcacgaaacaaaa-ttcagaaagtggctgaccaaggctcacttcgcttaagcgaaggctggctcgcttaag 17595  T
Q  375 cgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaac 440  Q
    |||||||||||||| | || ||||||  ||||||| || |||||||  ||| || |||||||||||    
T  17596 cgaccggcttacagaaagtttgggtttcgctcgctcacagttcgcttgcgggtctcttgagcgaac 17661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 363 - 456
Target Start/End: Original strand, 134867 - 134960
Alignment:
Q  363 agttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaa 456  Q
    ||||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| |  |||||||||||||    
T  134867 agttcgcttaagcgaccagcttacagtaggtctgggttcagttcgcttacgggtcgctcacggttcgcttaagcgaattcttgacagaatcaaa 134960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 134820 - 134882
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgac 358  Q
    ||||||| ||||||||||||| | |||||||| ||||||||||| ||||| ||||||||||||||    
T  134820 gtcccctagtgcacgaagcaaga-ttcagaaa-aggctgactaacgctcagttcgcttaagcgac 134882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 295 - 478
Target Start/End: Complemental strand, 752 - 581
Alignment:
Q  295 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    |||||| |||||||| ||||| ||||| |||| |||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||| | ||    
T  752 tcccctagtgcacgacgcaaa-gttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgaccggcttacagaaagt 655  T
Q  394 ctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 478  Q
      |||||    ||||       ||||| ||||||||||||||||||||||||||||||| ||| || ||||||||| || |||||    
T  654 tggggtt----tcgc-------tcgctgacggttcgcttgagcgaacttctgacagaatgaaattgatttttcgcttacgggttc 581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 379
Target Start/End: Complemental strand, 7688 - 7605
Alignment:
Q  295 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgacc 379  Q
    |||||| |||||||| ||||| ||||| |||| |||||||||||| ||| |||||||||||||||||||||||||||||| |||||    
T  7688 tcccctagtgcacgacgcaaa-gttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagttcgcttaagcgacc 7605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 296 - 420
Target Start/End: Original strand, 6861 - 6983
Alignment:
Q  296 cccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtc 394  Q
    ||||| |||||||| ||||| ||||| |||| |||||||| ||| ||| ||||||||||||||||||||| |||||||| |||||||||||||||| |||    
T  6861 cccctagtgcacgaggcaaa-gttca-aaagtggctgactgagg-tcatcttcgcttaagcgacggctagctcgcttaagcgaccggcttacagtaagtc 6957  T
Q  395 tgggttcagctcgcttacggttcgct 420  Q
    ||||||| ||||||||||| ||||||    
T  6958 tgggttctgctcgcttacgattcgct 6983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 130 - 479
Target Start/End: Complemental strand, 15856 - 15521
Alignment:
Q  130 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctag 229  Q
    |||||| ||||||||| | | ||||| |||||||| ||||||||||||||||||| ||| ||||||||  ||||| |||||||| ||||   ||||  ||    
T  15856 catcaagttcattcaacatagtatatgttcacttggtttcatactcaatcatctccaaa-ttcactaaactcaactaattcgattaccaaagtgtttcag 15758  T
Q  230 taggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagag 328  Q
    || ||||| | | | |||| || ||||||||||||| || |||| |||||  ||||||||| | | || ||| |||||||| ||||| ||||| |||| |    
T  15757 tatgattcag-tgcatatataaaggttatacaagttgaaagaaacatttttaaatgctcaaaaggatctcctagtgcacgaggcaaa-gttca-aaagtg 15661  T
Q  329 gctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggtt 427  Q
    ||||||||||| ||| ||||||||||||||||| | |||||||||| |||||| |||| ||   || ||||||    |||       |||||| ||||||    
T  15660 gctgactaagg-tcatcttcgcttaagcgacggttggttcgcttaagcgaccgtcttatagagagtttgggtt----tcg-------ttcgctaacggtt 15573  T
Q  428 cgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttct 479  Q
    ||||||||||||||||||||| |||  ||||| ||||||||| || ||||||    
T  15572 cgcttgagcgaacttctgacataatggaaatgatttttcgcttacgggttct 15521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 294 - 440
Target Start/End: Complemental strand, 11258 - 11112
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    ||||||| |||||||||||||  ||||||||| ||||||||||||||||| ||||||||||||| || ||  |||||||| ||||| ||| |||  ||||    
T  11258 gtcccctagtgcacgaagcaag-gttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtatctcgcttaagcgaccagctcacaaaaggt 11160  T
Q  394 ctgggttc-agctcgcttacggttcgctcacggttcgcttgagcgaac 440  Q
       |||||  ||||||| ||||||||||||| ||||||||||||||||    
T  11159 tgtggttctcgctcgctcacggttcgctcacagttcgcttgagcgaac 11112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 245 - 450
Target Start/End: Original strand, 121200 - 121406
Alignment:
Q  245 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 343  Q
    ||||||| ||||||||||||| || |||| |||||| ||||||||| | | | |||| |||||||||||||||| ||| |||| ||||||||||| |       
T  121200 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacgaagcaaaag-tcaaaaagtggctgactaagacctt 121298  T
Q  344 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgctta-cggttcgctcacggttcgcttgagcgaactt 442  Q
    |||||||||||||| |||| | |||||||| | ||||||||||||   ||  | |||| ||||||| |  |||||||||||||||||||  |||||||||    
T  121299 cttcgcttaagcgaaggctggctcgcttaagcaaccggcttacagagagttggtgttctgctcgctaaggggttcgctcacggttcgctcaagcgaactt 121398  T
Q  443 ctgacaga 450  Q
    ||| ||||    
T  121399 ctggcaga 121406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 245 - 450
Target Start/End: Original strand, 132077 - 132283
Alignment:
Q  245 tatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca 343  Q
    ||||||| ||||||||||||| || |||| |||||| ||||||||| | | | |||| |||||||||||||||| ||| |||| ||||||||||| |       
T  132077 tatacaaaggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacgaagcaaaag-tcaaaaagtggctgactaagacctt 132175  T
Q  344 cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgctta-cggttcgctcacggttcgcttgagcgaactt 442  Q
    |||||||||||||| |||| | |||||||| | ||||||||||||   ||  | |||| ||||||| |  |||||||||||||||||||  |||||||||    
T  132176 cttcgcttaagcgaaggctggctcgcttaagcaaccggcttacagagagttggtgttctgctcgctaaggggttcgctcacggttcgctcaagcgaactt 132275  T
Q  443 ctgacaga 450  Q
    ||| ||||    
T  132276 ctggcaga 132283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 228 - 441
Target Start/End: Complemental strand, 11782 - 11569
Alignment:
Q  228 agtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaa-tgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaa 325  Q
    ||||||||| |||| ||||||||||||||||||||| |||| |||| | || | || | ||||| | | |||||| ||||| |||||||| ||||||| |    
T  11782 agtaggatt-tgatgcctatacaagggttatacaagctaaaagaaaaacttaaaaaatactcaaaagggtcccctagtgcatgaagcaaa-gttcagata 11685  T
Q  326 gaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc-agctcgcttacggttcgctcacg 424  Q
    ||||||||||||||||||  |||||||||||| || |||||||||||| ||||| || ||||| | || ||| |||  ||||||| |||| |||||  ||    
T  11684 gaggctgactaaggctcagctcgcttaagcgaagggtagttcgcttaagcgaccagc-tacaggaagtttggattctcgctcgctcacggatcgcttgcg 11586  T
Q  425 gttcgcttgagcgaact 441  Q
    ||||||| |||||||||    
T  11585 gttcgctcgagcgaact 11569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 228 - 440
Target Start/End: Complemental strand, 24342 - 24131
Alignment:
Q  228 agtaggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaag 326  Q
    ||||||||| |||| |||| |||||||||||||||| |||| |||| | || | ||  ||||| | | |||||| |||||||||||||| ||||||||||    
T  24342 agtaggatt-tgatgcctacacaagggttatacaagctaaaagaaacacttaaaaacactcaaaagggtcccctagtgcacgaagcaaa-gttcagaaag 24245  T
Q  327 aggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttc-agctcgcttacggttcgctcacgg 425  Q
    || ||||||||||||||  |||||||||||| || ||| |||||||| ||||| ||| |||  |||| ||| |||  ||| ||| || |||||||| | |    
T  24244 agactgactaaggctcatctcgcttaagcgaaggatagctcgcttaagcgaccagctcacaaaaggt-tggattctcgcttgctcacagttcgctcgcag 24146  T
Q  426 ttcgcttgagcgaac 440  Q
    |||||||||||||||    
T  24145 ttcgcttgagcgaac 24131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 440
Target Start/End: Complemental strand, 24106 - 24070
Alignment:
Q  404 ctcgcttacggttcgctcacggttcgcttgagcgaac 440  Q
    ||||||||||||||||||||||||||||| |||||||    
T  24106 ctcgcttacggttcgctcacggttcgcttaagcgaac 24070  T

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Target: scaffold0077 (Bit Score: 51; Significance: 6e-20; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 330 - 420
Target Start/End: Complemental strand, 4281 - 4191
Alignment:
Q  330 ctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 420  Q
    ||||||||||   ||||||||||||||||| ||||||||||||| ||| | |||||||||| |||||||||| ||||| ||||||||||||    
T  4281 ctgactaaggtcaacttcgcttaagcgacgtctagttcgcttaagcgatcagcttacagtaagtctgggttctgctcgattacggttcgct 4191  T

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Target: scaffold0077; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 18024 - 17972
Alignment:
Q  88 aacaatccagaacatacacaattaattataattatgcacatacatcaatttca 140  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18024 aacaatccagaacatacacaattaattataattatgctcatacatcaatttca 17972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 23657 - 23605
Alignment:
Q  88 aacaatccagaacatacacaattaattataattatgcacatacatcaatttca 140  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23657 aacaatccagaacatacacaattaattataattatgctcatacatcaatttca 23605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 151 - 362
Target Start/End: Original strand, 1607 - 1817
Alignment:
Q  151 tatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctagtaggattctgatacctataca 250  Q
    |||||||||||||| ||||||||||| | || || ||||||||||||  |||||||| ||||| ||||   ||||| |||||||||| |     |||| |    
T  1607 tatatattcacttggtttcatactcactgatatccaaaattcactaaattcaaccaactcgattaccaatgtgttc-agtaggattcaggggtatatata 1705  T
Q  251 agggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcg 348  Q
    | ||| ||||||||| || |||| |||||| ||||||||| | | |||||| |||||||| |||||| |||| |||| |||||||||||| ||| |||||    
T  1706 aaggtcatacaagttgaaagaaacattttaaaatgctcaaaaggatcccctagtgcacgaggcaaaa-ttcaaaaagtggctgactaagg-tcatcttcg 1803  T
Q  349 cttaagcgacggct 362  Q
    ||||||||||||||    
T  1804 cttaagcgacggct 1817  T

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Target: scaffold0348 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 1584 - 1527
Alignment:
Q  88 aacaatccagaacatacacaattaattataattatgcacatacatcaatttcattcaa 145  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  1584 aacaatccagaacatacacaattaattaaaattatgctcatacatcaatttcattcaa 1527  T

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Target: scaffold0348; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 1716 - 1659
Alignment:
Q  23 tgtgtatatctacatacaacttaactacacatat-atttcatatgacttactactccg 79  Q
    ||||||||||||||||||||||||| |  |||||  ||||||||||||||| ||||||    
T  1716 tgtgtatatctacatacaacttaacaatgcatatgttttcatatgacttacaactccg 1659  T

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Target: scaffold0124 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 314 - 420
Target Start/End: Complemental strand, 35014 - 34908
Alignment:
Q  314 aaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttac 412  Q
    |||||||| |||| |||||||||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||| | ||   ||||| ||||||| ||    
T  35014 aaagttcaaaaagtggctgactaagg-tcatcttcgcttaagcgatggctagttcgcttaagcgaccggcttacagaaagttgaggttccgctcgctgac 34916  T
Q  413 ggttcgct 420  Q
    ||||||||    
T  34915 ggttcgct 34908  T

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Target: scaffold0124; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 478
Target Start/End: Complemental strand, 34917 - 34861
Alignment:
Q  422 acggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacaggttc 478  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||| || |||||    
T  34917 acggttcgcttgagcgaacttctgacagaatgaaattgatttttcgcttacgggttc 34861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 130 - 420
Target Start/End: Complemental strand, 102787 - 102499
Alignment:
Q  130 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaacatcaaccaattcgatcaccagcttgttctag 229  Q
    |||||| ||||||||| | | ||||| |||||||| ||||||||||||||||||| ||| || |||||  ||||| |||||||| ||||   ||||   |    
T  102787 catcaagttcattcaacatagtatatgttcacttggtttcatactcaatcatctccaaattt-actaaactcaactaattcgattaccaaggtgtttctg 102689  T
Q  230 taggattctgatacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagag 328  Q
    ||||| || | |   |||| || ||||||||| ||| || ||||  ||||| ||| ||||| | | |||||| |||||||| ||||  ||||| |||| |    
T  102688 taggactcag-tgtgtatataaaggttatacaggttgaaagaaaccttttaaaatactcaaaaggatcccctagtgcacgaggcaag-gttcaaaaagtg 102591  T
Q  329 gctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgct 420  Q
    || |||||||| ||| |||||||||||||| |||| |||||||||| |||||| ||||||| | ||  |||||| ||||||| ||||||||||    
T  102590 gccgactaagg-tcatcttcgcttaagcgatggctggttcgcttaagcgaccgacttacagaaagttggggttccgctcgctgacggttcgct 102499  T

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Target: scaffold0094 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 450
Target Start/End: Original strand, 51552 - 51749
Alignment:
Q  253 ggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgctt 351  Q
    ||||||||||||| || |||| |||||| ||||||||| | | | |||| |||||| |||||||| |||| |||| ||||||||||| |   ||||||||    
T  51552 ggttatacaagttgaaagaaacattttaaaatgctcaaaaggattccctagtgcacaaagcaaaa-ttcaaaaagtggctgactaagaccttcttcgctt 51650  T
Q  352 aagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttacggttcgctcacggttcgcttgagcgaacttctgacaga 450  Q
    ||||||||||| | ||||||||  |||| ||| | ||   ||   ||||  ||||||| |||||||||  ||||||||||| |||||||||||| ||||    
T  51651 aagcgacggctggctcgcttaagtgaccagctcatagagagttgaggtttcgctcgctaacggttcgcatacggttcgcttaagcgaacttctggcaga 51749  T

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Target: scaffold0235 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 420
Target Start/End: Complemental strand, 23332 - 23226
Alignment:
Q  314 aaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggtctgggttcagctcgcttac 412  Q
    |||||||| |||| |||||||||||| ||| ||||||||||||||||||||| |||||||  | ||||||| |||| | ||  ||||||| |||||| ||    
T  23332 aaagttcaaaaagtggctgactaagg-tcatcttcgcttaagcgacggctagctcgcttaggcaaccggctcacagaaagttggggttcaactcgctgac 23234  T
Q  413 ggttcgct 420  Q
    ||||||||    
T  23233 ggttcgct 23226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 465
Target Start/End: Complemental strand, 15524 - 15475
Alignment:
Q  416 tcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggttttt 465  Q
    ||||| |||||||||||||||||||||||| |||||| ||||||||||||    
T  15524 tcgctgacggttcgcttgagcgaacttctggcagaatgaaaatggttttt 15475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 420
Target Start/End: Complemental strand, 15633 - 15509
Alignment:
Q  295 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    |||||| |||||||| |||||  |||| |||| |||||||||||| ||| |||||||||||||| |||||| || ||||| |||| |||| |||| | ||    
T  15633 tcccctagtgcacgaggcaaat-ttcaaaaagtggctgactaagg-tcatcttcgcttaagcgatggctagctcacttaagcgactggctcacagaaagt 15536  T
Q  394 ctgggttcagctcgcttacggttcgct 420  Q
      |||||| ||||||| ||||||||||    
T  15535 tggggttccgctcgctgacggttcgct 15509  T

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Target: scaffold0107 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 295 - 420
Target Start/End: Complemental strand, 41283 - 41160
Alignment:
Q  295 tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctca-cttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    |||||| |||||||| ||||| ||||| |||| | |||||||||| ||| |||||||||||||||| ||||||||||||| ||| ||||| |||| ||||    
T  41283 tcccctagtgcacgaggcaaa-gttca-aaagtgtctgactaagg-tcatcttcgcttaagcgacgtctagttcgcttaagcgatcggctcacagaaggt 41187  T
Q  394 ctgggttcagctcgcttacggttcgct 420  Q
      |||||| ||||||| || |||||||    
T  41186 tggggttccgctcgctgacagttcgct 41160  T

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Target: scaffold0034 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 412
Target Start/End: Original strand, 72631 - 72748
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgaccggcttacagtaggt 393  Q
    |||||||  |||||||||||||| ||||||||| |||||||| |||||||  |||||||||||| || ||| |||||||| ||||| ||| |||  ||||    
T  72631 gtcccctaatgcacgaagcaaaaattcagaaagtggctgact-aggctcagctcgcttaagcgaagggtagctcgcttaagcgaccagctcacaaaaggt 72729  T
Q  394 ctgggttcagctcgcttac 412  Q
      |||||  ||||||||||    
T  72730 tggggttttgctcgcttac 72748  T

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Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 422 - 472
Target Start/End: Original strand, 49595 - 49645
Alignment:
Q  422 acggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcac 472  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  49595 acggttcgattgagcgaactttggacagaatcaaaatggtttttcgctcac 49645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 379
Target Start/End: Complemental strand, 3966 - 3882
Alignment:
Q  294 gtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 379  Q
    ||||||| |||||||||||||  ||||| ||| ||||||||||| ||||| ||||||||||||| || ||| |||||||| |||||    
T  3966 gtcccctagtgcacgaagcaag-gttcaaaaaaaggctgactaatgctcagttcgcttaagcgaagggtagctcgcttaagcgacc 3882  T

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Target: scaffold0206 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 379
Target Start/End: Original strand, 18045 - 18121
Alignment:
Q  302 gtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaatcgacc 379  Q
    |||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||  | ||| |||||||| |||||    
T  18045 gtgcacgaagcaag-gttcagaaaaaggctgactaaggctcagttcgcttaagcgaaaggtagctcgcttaagcgacc 18121  T

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Target: scaffold0337 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 10053 - 9950
Alignment:
Q  93 tccagaacatacacaattaattataattatgcacatacatcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattc 192  Q
    ||||||| ||||||||||||||||||| |  |  || |||||| |||||| || | | ||||| |||||||| |||||||||||||||||||  ||||||    
T  10053 tccagaaaatacacaattaattataatcaaactaatgcatcaagttcattaaacatagtatatgttcacttggtttcatactcaatcatctc-caaattc 9955  T
Q  193 actaa 197  Q
    |||||    
T  9954 actaa 9950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 379
Target Start/End: Original strand, 14 - 152
Alignment:
Q  241 tacctatacaagggttatacaagttaaaggaaatattttagaatgctcaagaag-tcccctcgtgcacgaagcaaaagttcagaaagaggctgactaagg 339  Q
    |||||||||||| |||||||||| |||| |||| | || | ||| || || | | || ||| |||||||| ||||| |||||||||||||||  ||||||    
T  14 tacctatacaagagttatacaagctaaaagaaacaattaaaaatacttaaaagggtctcctagtgcacgaggcaaa-gttcagaaagaggctagctaagg 112  T
Q  340 ctcacttcgcttaagcgacggctagttcgcttaatcgacc 379  Q
    ||||  |||| ||||||| || ||| |||||||| |||||    
T  113 ctcagctcgcataagcgaagggtagctcgcttaagcgacc 152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 1207 - 1273
Alignment:
Q  130 catcaatttcattcaataaattatatattcacttgatttcatactcaatcatctcaaaaattcactaa 197  Q
    |||||| ||||||||| | | ||||| |||||||| |||||||||||||||||||  |||||||||||    
T  1207 catcaagttcattcaacatagtatatgttcacttggtttcatactcaatcatctc-caaattcactaa 1273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 46748 - 46685
Alignment:
Q  23 tgtgtatatctacatacaacttaactacacatatat-ttcatatgacttactactccgaaaatt 85  Q
    |||||||||||||||||||||| || |  ||||||| |||||||||||||| |||||| |||||    
T  46748 tgtgtatatctacatacaacttgacaatgcatatatgttcatatgacttacaactccgcaaatt 46685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 51021 - 50958
Alignment:
Q  23 tgtgtatatctacatacaacttaactacacatatat-ttcatatgacttactactccgaaaatt 85  Q
    |||||||||||||||||||||| || |  ||||||| |||||||||||||| |||||| |||||    
T  51021 tgtgtatatctacatacaacttgacaatgcatatatgttcatatgacttacaactccgcaaatt 50958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 6299 - 6343
Alignment:
Q  245 tatacaagggttatacaagttaaaggaaatattttagaatgctca 289  Q
    ||||||| ||||||||||||| || |||| |||||||||||||||    
T  6299 tatacaaaggttatacaagttgaaagaaacattttagaatgctca 6343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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