View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0164_low_5 (Length: 251)

Name: NF0164_low_5
Description: NF0164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0164_low_5
NF0164_low_5
[»] chr3 (45 HSPs)
chr3 (9-251)||(13838770-13839012)
chr3 (91-251)||(15859169-15859330)
chr3 (139-251)||(51158163-51158275)
chr3 (22-209)||(15468520-15468717)
chr3 (22-209)||(22275088-22275285)
chr3 (101-251)||(2049777-2049928)
chr3 (101-222)||(12030321-12030443)
chr3 (139-222)||(15614840-15614923)
chr3 (129-248)||(47984646-47984765)
chr3 (129-248)||(48003220-48003339)
chr3 (22-102)||(48421624-48421704)
chr3 (139-242)||(17912635-17912738)
chr3 (129-248)||(47993933-47994052)
chr3 (129-248)||(48012506-48012625)
chr3 (93-246)||(16821099-16821252)
chr3 (129-251)||(15936772-15936894)
chr3 (139-251)||(14842706-14842818)
chr3 (139-251)||(15938614-15938726)
chr3 (91-236)||(16744274-16744420)
chr3 (33-102)||(14177158-14177227)
chr3 (22-102)||(18969968-18970048)
chr3 (93-163)||(17956210-17956281)
chr3 (22-102)||(39656390-39656467)
chr3 (101-164)||(30152908-30152972)
chr3 (126-248)||(16880114-16880237)
chr3 (100-169)||(33341847-33341916)
chr3 (108-248)||(11329094-11329235)
chr3 (108-248)||(14528145-14528286)
chr3 (108-248)||(17139481-17139622)
chr3 (100-164)||(19946664-19946728)
chr3 (129-222)||(45860801-45860894)
chr3 (112-208)||(47784920-47785017)
chr3 (93-134)||(49232396-49232437)
chr3 (91-242)||(55440988-55441141)
chr3 (101-248)||(14295404-14295552)
chr3 (100-142)||(7853948-7853990)
chr3 (136-222)||(13955064-13955150)
chr3 (136-222)||(13975896-13975982)
chr3 (108-248)||(12560369-12560510)
chr3 (93-122)||(16934241-16934270)
chr3 (129-222)||(41270071-41270164)
chr3 (101-169)||(45581597-45581666)
chr3 (129-222)||(55316215-55316308)
chr3 (139-251)||(11986312-11986424)
chr3 (101-248)||(14301031-14301179)
[»] scaffold0009 (1 HSPs)
scaffold0009 (9-251)||(271901-272143)
[»] scaffold0001 (3 HSPs)
scaffold0001 (9-251)||(171781-172023)
scaffold0001 (9-251)||(177484-177726)
scaffold0001 (91-163)||(70840-70913)
[»] chr8 (41 HSPs)
chr8 (9-247)||(24928940-24929178)
chr8 (9-169)||(41507029-41507190)
chr8 (39-142)||(2544855-2544958)
chr8 (139-222)||(16193890-16193973)
chr8 (129-251)||(43373613-43373735)
chr8 (11-242)||(22907367-22907607)
chr8 (139-222)||(24548988-24549071)
chr8 (144-231)||(17345581-17345668)
chr8 (22-102)||(23217924-23218004)
chr8 (90-248)||(23837153-23837312)
chr8 (139-224)||(16405144-16405229)
chr8 (139-251)||(6774391-6774503)
chr8 (129-230)||(222846-222947)
chr8 (129-230)||(736469-736570)
chr8 (129-230)||(860364-860465)
chr8 (28-102)||(22981244-22981318)
chr8 (22-102)||(22321574-22321654)
chr8 (105-215)||(23226242-23226353)
chr8 (91-209)||(41246614-41246733)
chr8 (129-222)||(21852128-21852221)
chr8 (93-141)||(24717111-24717159)
chr8 (129-222)||(21844735-21844828)
chr8 (145-222)||(30120734-30120811)
chr8 (112-242)||(22735977-22736108)
chr8 (11-89)||(5238125-5238203)
chr8 (91-188)||(17285223-17285321)
chr8 (11-89)||(24661395-24661473)
chr8 (93-162)||(13662492-13662561)
chr8 (93-134)||(15319414-15319455)
chr8 (93-134)||(15499783-15499824)
chr8 (95-215)||(21198318-21198439)
chr8 (93-134)||(22006513-22006554)
chr8 (93-134)||(22089049-22089090)
chr8 (91-215)||(31194490-31194615)
chr8 (33-81)||(21259637-21259685)
chr8 (91-248)||(39446899-39447057)
chr8 (11-89)||(43685584-43685662)
chr8 (93-122)||(3431548-3431577)
chr8 (93-122)||(13721195-13721224)
chr8 (90-186)||(19993249-19993346)
chr8 (112-164)||(29759919-29759972)
[»] chr2 (28 HSPs)
chr2 (9-176)||(25601898-25602066)
chr2 (91-251)||(8891199-8891360)
chr2 (139-251)||(462744-462856)
chr2 (101-251)||(36982586-36982737)
chr2 (98-251)||(19794849-19795004)
chr2 (139-251)||(24341534-24341646)
chr2 (139-220)||(20627489-20627570)
chr2 (139-230)||(43643123-43643214)
chr2 (139-231)||(7508008-7508101)
chr2 (93-150)||(22274681-22274738)
chr2 (112-215)||(25265571-25265675)
chr2 (129-230)||(19886816-19886917)
chr2 (105-215)||(19666498-19666609)
chr2 (28-102)||(67859-67933)
chr2 (93-150)||(22283914-22283971)
chr2 (95-215)||(25305405-25305526)
chr2 (44-102)||(7321586-7321644)
chr2 (100-215)||(19433498-19433614)
chr2 (91-236)||(24571437-24571583)
chr2 (93-134)||(12728352-12728393)
chr2 (129-222)||(17396827-17396920)
chr2 (93-134)||(24686036-24686077)
chr2 (93-134)||(34824435-34824476)
chr2 (101-197)||(36890869-36890966)
chr2 (99-209)||(32465822-32465933)
chr2 (90-209)||(28974003-28974124)
chr2 (93-122)||(42178236-42178265)
chr2 (101-248)||(67958-68106)
[»] scaffold1734 (1 HSPs)
scaffold1734 (9-150)||(1273-1414)
[»] scaffold0116 (2 HSPs)
scaffold0116 (9-169)||(29965-30126)
scaffold0116 (129-222)||(31-124)
[»] chr5 (27 HSPs)
chr5 (22-209)||(17471768-17471956)
chr5 (9-169)||(2031684-2031845)
chr5 (99-251)||(27182692-27182845)
chr5 (91-251)||(23506922-23507083)
chr5 (139-251)||(18531212-18531324)
chr5 (139-251)||(22053978-22054090)
chr5 (144-231)||(34939289-34939376)
chr5 (22-102)||(25004863-25004943)
chr5 (129-230)||(12370-12471)
chr5 (129-230)||(25426624-25426725)
chr5 (129-230)||(18778147-18778248)
chr5 (129-230)||(21073750-21073851)
chr5 (129-230)||(22366636-22366737)
chr5 (129-230)||(19499895-19499996)
chr5 (139-246)||(43443534-43443641)
chr5 (144-222)||(4200148-4200226)
chr5 (129-222)||(27009837-27009930)
chr5 (107-178)||(29190481-29190553)
chr5 (11-89)||(20623007-20623085)
chr5 (11-89)||(21233675-21233753)
chr5 (93-134)||(1219775-1219816)
chr5 (112-164)||(11342661-11342714)
chr5 (93-134)||(22883339-22883380)
chr5 (182-251)||(29188417-29188486)
chr5 (93-122)||(9730650-9730679)
chr5 (93-122)||(23514521-23514550)
chr5 (91-209)||(4865218-4865338)
[»] chr4 (27 HSPs)
chr4 (91-251)||(13246387-13246548)
chr4 (91-251)||(54118389-54118550)
chr4 (9-186)||(34395131-34395309)
chr4 (139-232)||(111401-111494)
chr4 (139-251)||(15675234-15675346)
chr4 (139-251)||(31115635-31115747)
chr4 (11-242)||(26680070-26680310)
chr4 (93-163)||(5682753-5682824)
chr4 (34-93)||(19559422-19559481)
chr4 (39-102)||(34177767-34177830)
chr4 (95-215)||(41166112-41166233)
chr4 (93-141)||(25119457-25119505)
chr4 (129-246)||(10644215-10644332)
chr4 (90-209)||(14901187-14901307)
chr4 (91-248)||(18494461-18494620)
chr4 (129-230)||(47357650-47357751)
chr4 (139-191)||(10104436-10104488)
chr4 (101-164)||(14951728-14951792)
chr4 (91-209)||(23270106-23270225)
chr4 (93-134)||(18168930-18168971)
chr4 (130-191)||(40885740-40885801)
chr4 (91-191)||(47535236-47535337)
chr4 (91-186)||(44055871-44055967)
chr4 (126-248)||(13809643-13809766)
chr4 (72-102)||(9795314-9795344)
chr4 (201-251)||(10104395-10104445)
chr4 (91-186)||(16732124-16732221)
[»] scaffold0122 (1 HSPs)
scaffold0122 (9-163)||(24415-24570)
[»] scaffold0077 (1 HSPs)
scaffold0077 (101-251)||(37058-37209)
[»] scaffold0012 (2 HSPs)
scaffold0012 (9-164)||(253206-253362)
scaffold0012 (144-251)||(247587-247694)
[»] scaffold0160 (1 HSPs)
scaffold0160 (22-141)||(3406-3525)
[»] chr1 (26 HSPs)
chr1 (112-251)||(37844596-37844735)
chr1 (91-251)||(20445636-20445797)
chr1 (91-251)||(20531401-20531562)
chr1 (91-251)||(20893771-20893932)
chr1 (101-222)||(20913004-20913126)
chr1 (101-251)||(20931312-20931463)
chr1 (139-222)||(2116260-2116343)
chr1 (139-251)||(22227815-22227927)
chr1 (139-251)||(22232512-22232624)
chr1 (139-251)||(41394228-41394340)
chr1 (91-214)||(20177131-20177255)
chr1 (91-209)||(13377012-13377131)
chr1 (93-141)||(44035219-44035267)
chr1 (139-191)||(45051448-45051500)
chr1 (101-163)||(15861650-15861713)
chr1 (101-163)||(22366985-22367048)
chr1 (90-215)||(41229105-41229231)
chr1 (93-134)||(18060013-18060054)
chr1 (90-209)||(49967606-49967725)
chr1 (91-209)||(51627836-51627956)
chr1 (108-209)||(22143533-22143635)
chr1 (11-89)||(51452530-51452608)
chr1 (129-222)||(5072551-5072644)
chr1 (129-222)||(18601281-18601374)
chr1 (93-122)||(21650307-21650336)
chr1 (101-141)||(21859977-21860017)
[»] scaffold0622 (1 HSPs)
scaffold0622 (91-231)||(9339-9480)
[»] scaffold0023 (3 HSPs)
scaffold0023 (101-251)||(48565-48716)
scaffold0023 (129-222)||(36089-36182)
scaffold0023 (93-134)||(154262-154303)
[»] scaffold0032 (2 HSPs)
scaffold0032 (28-138)||(13537-13647)
scaffold0032 (28-102)||(116284-116358)
[»] chr7 (38 HSPs)
chr7 (91-251)||(11580884-11581045)
chr7 (91-251)||(13037159-13037320)
chr7 (139-251)||(3059972-3060084)
chr7 (139-251)||(47481176-47481288)
chr7 (101-222)||(36052634-36052756)
chr7 (11-242)||(7292886-7293126)
chr7 (144-251)||(16211777-16211884)
chr7 (104-251)||(13320984-13321133)
chr7 (129-251)||(18253980-18254102)
chr7 (139-222)||(16479124-16479207)
chr7 (34-102)||(13352011-13352079)
chr7 (91-215)||(17224104-17224229)
chr7 (129-230)||(10989406-10989507)
chr7 (28-96)||(15977975-15978043)
chr7 (91-248)||(13274742-13274901)
chr7 (129-244)||(13911166-13911281)
chr7 (93-138)||(1937252-1937297)
chr7 (129-222)||(13572672-13572765)
chr7 (101-209)||(26070436-26070545)
chr7 (101-209)||(26094223-26094332)
chr7 (139-222)||(2437463-2437546)
chr7 (91-208)||(11287372-11287491)
chr7 (126-248)||(16570139-16570262)
chr7 (126-248)||(16595400-16595523)
chr7 (11-89)||(15441711-15441789)
chr7 (11-89)||(30262276-30262354)
chr7 (112-164)||(126392-126445)
chr7 (108-248)||(12248254-12248395)
chr7 (28-81)||(18151494-18151547)
chr7 (91-242)||(49047813-49047966)
chr7 (127-251)||(296111-296233)
chr7 (100-142)||(7284299-7284341)
chr7 (93-122)||(371048-371077)
chr7 (93-122)||(14251165-14251194)
chr7 (93-134)||(15951046-15951087)
chr7 (137-222)||(25292512-25292597)
chr7 (91-186)||(15822626-15822722)
chr7 (91-186)||(35094773-35094869)
[»] scaffold0075 (2 HSPs)
scaffold0075 (9-134)||(4818-4940)
scaffold0075 (139-251)||(34605-34718)
[»] scaffold0011 (3 HSPs)
scaffold0011 (101-251)||(123309-123460)
scaffold0011 (91-186)||(255009-255105)
scaffold0011 (91-186)||(261615-261711)
[»] chr6 (25 HSPs)
chr6 (91-251)||(23153404-23153565)
chr6 (139-248)||(14626266-14626375)
chr6 (144-231)||(1657912-1657999)
chr6 (91-215)||(18381849-18381974)
chr6 (139-251)||(1650238-1650350)
chr6 (101-215)||(35009620-35009735)
chr6 (144-231)||(15862484-15862570)
chr6 (22-96)||(15889840-15889914)
chr6 (93-164)||(19983516-19983588)
chr6 (93-164)||(35015382-35015454)
chr6 (129-230)||(25175559-25175660)
chr6 (28-102)||(25640683-25640757)
chr6 (144-230)||(27654138-27654224)
chr6 (37-102)||(15005034-15005099)
chr6 (22-95)||(22585681-22585754)
chr6 (22-95)||(22590512-22590585)
chr6 (139-251)||(27740844-27740956)
chr6 (91-248)||(21623124-21623282)
chr6 (129-230)||(16825909-16826010)
chr6 (100-191)||(18583299-18583393)
chr6 (128-191)||(29665887-29665950)
chr6 (96-134)||(16556394-16556432)
chr6 (96-134)||(16632950-16632988)
chr6 (93-134)||(22225993-22226034)
chr6 (28-96)||(17375053-17375121)
[»] scaffold0218 (1 HSPs)
scaffold0218 (112-251)||(5206-5345)
[»] scaffold0195 (2 HSPs)
scaffold0195 (101-251)||(19173-19324)
scaffold0195 (101-251)||(21257-21408)
[»] scaffold0162 (3 HSPs)
scaffold0162 (112-251)||(26560-26699)
scaffold0162 (129-215)||(8358-8444)
scaffold0162 (88-215)||(7191-7319)
[»] scaffold0025 (2 HSPs)
scaffold0025 (101-251)||(148688-148839)
scaffold0025 (139-251)||(8855-8967)
[»] scaffold0266 (2 HSPs)
scaffold0266 (91-251)||(1081-1242)
scaffold0266 (139-251)||(3727-3839)
[»] scaffold0106 (1 HSPs)
scaffold0106 (98-251)||(41693-41847)
[»] scaffold0498 (1 HSPs)
scaffold0498 (129-251)||(8874-8996)
[»] scaffold0396 (1 HSPs)
scaffold0396 (9-142)||(11947-12081)
[»] scaffold1542 (1 HSPs)
scaffold1542 (146-251)||(679-784)
[»] scaffold0078 (2 HSPs)
scaffold0078 (91-242)||(37219-37371)
scaffold0078 (93-141)||(41267-41315)
[»] scaffold0215 (2 HSPs)
scaffold0215 (139-251)||(9482-9594)
scaffold0215 (139-251)||(16380-16492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (101-231)||(128333-128464)
scaffold0008 (144-244)||(31817-31917)
[»] scaffold0529 (1 HSPs)
scaffold0529 (139-251)||(2968-3081)
[»] scaffold0021 (3 HSPs)
scaffold0021 (33-102)||(22186-22255)
scaffold0021 (91-209)||(132422-132541)
scaffold0021 (108-209)||(11660-11762)
[»] scaffold0483 (2 HSPs)
scaffold0483 (22-94)||(1017-1089)
scaffold0483 (91-188)||(6617-6715)
[»] scaffold0109 (1 HSPs)
scaffold0109 (22-94)||(45804-45876)
[»] scaffold0026 (2 HSPs)
scaffold0026 (139-251)||(107753-107865)
scaffold0026 (129-222)||(64691-64784)
[»] scaffold1295 (1 HSPs)
scaffold1295 (28-102)||(159-233)
[»] scaffold0507 (1 HSPs)
scaffold0507 (28-102)||(1629-1703)
[»] scaffold0049 (1 HSPs)
scaffold0049 (129-251)||(48183-48305)
[»] scaffold0125 (1 HSPs)
scaffold0125 (112-215)||(41626-41730)
[»] scaffold0053 (1 HSPs)
scaffold0053 (91-221)||(77007-77138)
[»] scaffold0302 (1 HSPs)
scaffold0302 (129-231)||(12111-12213)
[»] scaffold0413 (1 HSPs)
scaffold0413 (139-251)||(6209-6320)
[»] scaffold0369 (1 HSPs)
scaffold0369 (139-251)||(3728-3840)
[»] scaffold0175 (1 HSPs)
scaffold0175 (139-251)||(1101-1212)
[»] scaffold0016 (3 HSPs)
scaffold0016 (93-164)||(162404-162476)
scaffold0016 (91-207)||(116687-116804)
scaffold0016 (93-164)||(166482-166554)
[»] scaffold0686 (1 HSPs)
scaffold0686 (93-163)||(6309-6380)
[»] scaffold0104 (1 HSPs)
scaffold0104 (139-222)||(48520-48603)
[»] scaffold0013 (1 HSPs)
scaffold0013 (91-215)||(35435-35559)
[»] scaffold0184 (1 HSPs)
scaffold0184 (93-141)||(31529-31577)
[»] scaffold0132 (1 HSPs)
scaffold0132 (139-215)||(13512-13588)
[»] scaffold0022 (3 HSPs)
scaffold0022 (139-251)||(5349-5460)
scaffold0022 (91-251)||(109545-109707)
scaffold0022 (112-220)||(103083-103192)
[»] scaffold0079 (1 HSPs)
scaffold0079 (22-102)||(3969-4049)
[»] scaffold1560 (1 HSPs)
scaffold1560 (139-222)||(26-109)
[»] scaffold0120 (2 HSPs)
scaffold0120 (100-209)||(31176-31286)
scaffold0120 (100-208)||(21477-21586)
[»] scaffold0063 (1 HSPs)
scaffold0063 (33-95)||(44249-44311)
[»] scaffold0057 (1 HSPs)
scaffold0057 (28-102)||(5936-6010)
[»] scaffold0139 (2 HSPs)
scaffold0139 (144-221)||(21279-21356)
scaffold0139 (139-221)||(14224-14306)
[»] scaffold0361 (1 HSPs)
scaffold0361 (112-191)||(3186-3266)
[»] scaffold0076 (2 HSPs)
scaffold0076 (129-222)||(42993-43086)
scaffold0076 (93-134)||(39063-39104)
[»] scaffold0342 (1 HSPs)
scaffold0342 (93-141)||(700-747)
[»] scaffold0150 (1 HSPs)
scaffold0150 (100-215)||(28501-28617)
[»] scaffold0833 (1 HSPs)
scaffold0833 (100-186)||(3265-3351)
[»] scaffold0014 (1 HSPs)
scaffold0014 (91-164)||(159257-159332)
[»] scaffold0589 (1 HSPs)
scaffold0589 (108-209)||(7807-7909)
[»] scaffold0213 (1 HSPs)
scaffold0213 (93-145)||(29122-29174)
[»] scaffold0035 (2 HSPs)
scaffold0035 (91-209)||(109634-109754)
scaffold0035 (91-208)||(118136-118255)
[»] scaffold0480 (2 HSPs)
scaffold0480 (91-209)||(5418-5537)
scaffold0480 (108-209)||(9054-9156)
[»] scaffold0338 (1 HSPs)
scaffold0338 (91-208)||(8942-9061)
[»] scaffold0158 (1 HSPs)
scaffold0158 (100-186)||(24925-25010)
[»] scaffold0092 (1 HSPs)
scaffold0092 (126-248)||(3310-3433)
[»] scaffold1164 (1 HSPs)
scaffold1164 (101-186)||(1347-1433)
[»] scaffold0107 (1 HSPs)
scaffold0107 (93-123)||(39606-39636)
[»] scaffold0095 (1 HSPs)
scaffold0095 (91-248)||(33861-34019)
[»] scaffold1272 (1 HSPs)
scaffold1272 (91-215)||(265-390)
[»] scaffold0039 (2 HSPs)
scaffold0039 (101-169)||(12740-12809)
scaffold0039 (101-169)||(19121-19190)
[»] scaffold0673 (1 HSPs)
scaffold0673 (99-186)||(1017-1105)


Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 9 - 251
Target Start/End: Original strand, 13838770 - 13839012
Alignment:
Q  9 gcaatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcacaa 108  Q
    ||||||||||   ||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  13838770 gcaatgagattatcatcaacaattaaccacaaccacaacttatgatcattcattccatcatatttcaacaacaacatgtcgtaattcaccaatttcacaa 13838869  T
Q  109 aaccaccaacaacaatccatttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaa 208  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  13838870 aaccaccaacaacaatccatttctcaacaacaaatcatgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagccataacatcaa 13838969  T
Q  209 tagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    | |||||||||||||||||||||||||||||||||||||||||    
T  13838970 ttgaacaagaatcataactcaatccaaccacaacttagcaaaa 13839012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 91 - 251
Target Start/End: Complemental strand, 15859330 - 15859169
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    ||||||||| |||||| ||| || |||||||||| ||  |||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15859330 aattcaccattttcaccaaaacaacaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 15859231  T
Q  190 ttaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||| ||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  15859230 ttaacagccataacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaa 15859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 51158275 - 51158163
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||| |    
T  51158275 caattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaacaa 51158176  T
Q  239 caacttagcaaaa 251  Q
    |||||||||||||    
T  51158175 caacttagcaaaa 51158163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 22 - 209
Target Start/End: Complemental strand, 15468717 - 15468520
Alignment:
Q  22 catcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcaca---------aaacc 112  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||         ||| |    
T  15468717 catcaacaattaaccacaaccacaacttatgatcatacattccatcatgtttcaacaacaacatgtcataattcaccaatttcacaaatttcaccaaaac 15468618  T
Q  113 accaacaacaa-tccatttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaat 209  Q
    | ||||||||| || | |||||| || |||| |||||||||||||||||||||||||||||||  || | ||||||| |||||||  | |||||||||    
T  15468617 aacaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcattcacaataacatcagttaacaataacaacatcaat 15468520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 22 - 209
Target Start/End: Original strand, 22275088 - 22275285
Alignment:
Q  22 catcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcaca---------aaacc 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||         ||| |    
T  22275088 catcaacaattaaccacaaccacaacttatgatcatgcattccatcatgtttcaacaacaacatgtcataattcactaatttcacaaatttcaccaaaac 22275187  T
Q  113 accaacaacaa-tccatttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaat 209  Q
    ||||||||||| || | |||||| || |||| |||||||||||||||| ||||||||||||||  || | ||||||| |||||||  | |||||||||    
T  22275188 accaacaacaattcaaattctcatcatcaattcatgaatatgcatacctaagcaatgattcattcacaataacatcagttaacaataacaacatcaat 22275285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 251
Target Start/End: Original strand, 2049777 - 2049928
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 199  Q
    |||||| ||| ||||||||||||| ||  || ||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2049777 tttcaccaaaacaccaacaacaattcaaattttcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 2049876  T
Q  200 taacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    || ||||||| |||||| ||||| | |||||   ||| ||||||||||||||    
T  2049877 tagcatcaattgaacaaaaatcaaatctcaaattaacaacaacttagcaaaa 2049928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 101 - 222
Target Start/End: Complemental strand, 12030443 - 12030321
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 199  Q
    |||||| ||| ||||||||||||| ||  |||||| || |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12030443 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccataacatcaattaacaacca 12030344  T
Q  200 taacatcaatagaacaagaatca 222  Q
    || ||||||| ||||||||||||    
T  12030343 tagcatcaattgaacaagaatca 12030321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 15614840 - 15614923
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||    
T  15614840 caattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatca 15614923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 129 - 248
Target Start/End: Original strand, 47984646 - 47984765
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| ||||||||||||||||||||  ||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||| | |||    
T  47984646 ttctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctc 47984745  T
Q  229 aatccaaccacaacttagca 248  Q
    |||||||| |||||||||||    
T  47984746 aatccaacaacaacttagca 47984765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 129 - 248
Target Start/End: Original strand, 48003220 - 48003339
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| ||||||||||||||||||||  ||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||| | |||    
T  48003220 ttctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctc 48003319  T
Q  229 aatccaaccacaacttagca 248  Q
    |||||||| |||||||||||    
T  48003320 aatccaacaacaacttagca 48003339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 48421624 - 48421704
Alignment:
Q  22 catcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    ||||| ||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  48421624 catcaacaattaaccacaaccacaatttataatcatgcattccatcatatttcaacaacaacatgtcataattcaccaatt 48421704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 17912738 - 17912635
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||| || ||||| |||||||| |||||| |||| |    
T  17912738 caattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcgattgaacatgaatcatagctcaattcaacta 17912639  T
Q  239 caac 242  Q
    ||||    
T  17912638 caac 17912635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 129 - 248
Target Start/End: Original strand, 47993933 - 47994052
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| ||||||||||||||||||||  ||||||||||||| |||| ||||||||||||| | ||||||||| ||||| |||||| | |||    
T  47993933 ttctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctc 47994032  T
Q  229 aatccaaccacaacttagca 248  Q
    |||||||| |||||||||||    
T  47994033 aatccaacaacaacttagca 47994052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 129 - 248
Target Start/End: Original strand, 48012506 - 48012625
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| ||||||||||||||||||||  ||||||||||||| |||| ||||||||||||| | ||||||||| ||||| |||||| | |||    
T  48012506 ttctcatcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctc 48012605  T
Q  229 aatccaaccacaacttagca 248  Q
    |||||||| |||||||||||    
T  48012606 aatccaacaacaacttagca 48012625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 246
Target Start/End: Original strand, 16821099 - 16821252
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaatta 192  Q
    ||||||||||||||||||||||||||||| ||  |||| ||| ||  ||| |||||||||||| ||||||||||| ||||||||| || || ||||| ||    
T  16821099 ttcaccaatttcacaaaaccaccaacaaccatttatttatcatcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaata 16821198  T
Q  193 acaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttag 246  Q
    |||  |||||||||||| ||||| |||||| | |||||  |||| |||||||||    
T  16821199 acattcataacatcaattgaacatgaatcacatctcaaatcaacaacaacttag 16821252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 15936894 - 15936772
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| ||||||||||||||| || ||||| ||||||||| ||||||||||||||||| ||||||||||||| |||||||||||| | |||    
T  15936894 ttctcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctc 15936795  T
Q  229 aatccaaccacaacttagcaaaa 251  Q
    ||   ||| |||||||| |||||    
T  15936794 aaattaacaacaacttatcaaaa 15936772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 14842818 - 14842706
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||||| |||||| |||| ||||||||| || |||||||||||||| ||||||||||||| |||||||||||| | |||||   ||| |    
T  14842818 caatccatgaatatgcaaacccaatcaattattcatcaatcataacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaa 14842719  T
Q  239 caacttagcaaaa 251  Q
    |||||||||||||    
T  14842718 caacttagcaaaa 14842706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 15938726 - 15938614
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| ||||||||||||||| || ||||| ||||||||| ||||||||||||||||| ||||||||||||| |||||||||||| | |||||   ||| |    
T  15938726 caatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaa 15938627  T
Q  239 caacttagcaaaa 251  Q
    ||||||| |||||    
T  15938626 caacttatcaaaa 15938614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 236
Target Start/End: Complemental strand, 16744420 - 16744274
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    ||||||| |||||||| ||| ||||||||||||| ||  |||||| || |||| |||||| ||| |||||||||||||||||||||||| |||||||  |    
T  16744420 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaacatgtatacccaagcaatgattcatcaactacaacattta 16744321  T
Q  190 ttaacaaccataacatcaatagaacaagaatcataactcaatccaac 236  Q
    ||| || | | ||||||||| | |||||||||||| |||||| ||||    
T  16744320 ttagcatcaacaacatcaattgcacaagaatcatagctcaattcaac 16744274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 14177227 - 14177158
Alignment:
Q  33 aaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    ||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||| |||||    
T  14177227 aaccacaaccacaacttataatcatgcattccatcacaattcaaccacaacatgtcataattcatcaatt 14177158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 18969968 - 18970048
Alignment:
Q  22 catcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    ||||| |||| ||||||||||||||||||| ||||||| |||||||| | ||||||||||||||||||||||||| |||||    
T  18969968 catcaacaatcaaccacaaccacaacttataatcatgctttccatcagaattcaacaacaacatgtcataattcatcaatt 18970048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 17956281 - 17956210
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaag 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||| |||||||    
T  17956281 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaag 17956210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 39656390 - 39656467
Alignment:
Q  22 catcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    ||||| |||||||||||||||||||||||| ||||||||| |||||| ||||    |||||||||||||||||||||||||    
T  39656390 catcaacaattaaccacaaccacaacttataatcatgcatgccatcatattt---gaacaacatgtcataattcaccaatt 39656467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 30152908 - 30152972
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagc 164  Q
    |||||| ||| ||||||||||||||||||||||||||||||  ||||||| ||||| ||||||||    
T  30152908 tttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagc 30152972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 248
Target Start/End: Original strand, 16880114 - 16880237
Alignment:
Q  126 catttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcata 224  Q
    ||||| ||| ||| ||| ||||||| ||||| |||||||| |||| | |||| ||||||||||| ||| |||| ||||||||||| ||||| ||||| ||    
T  16880114 catttatcaccaataattcatgaattatgcacacccaagccatgaattatcatccacaacatcacttagcaacaataacatcaattgaacatgaatctta 16880213  T
Q  225 actcaatccaaccacaacttagca 248  Q
     | |||| |||| ||||| |||||    
T  16880214 tcacaattcaacaacaacatagca 16880237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 33341847 - 33341916
Alignment:
Q  100 atttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatga 169  Q
    |||| |||||||||||||||||||  ||||||||||||||||| ||||||| ||||| |||||||| ||||    
T  33341847 attttacaaaaccaccaacaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatga 33341916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 248
Target Start/End: Complemental strand, 11329235 - 11329094
Alignment:
Q  108 aaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatc 206  Q
    |||| ||||||||||   ||||||||| ||||||  ||||||| |||||||||||||| |||| | |||| | ||||||||| ||| |||| | ||||||    
T  11329235 aaactaccaacaacatctcatttctcatcaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatc 11329136  T
Q  207 aatagaacaagaatcataactcaatccaaccacaacttagca 248  Q
    ||| || || ||||| || | |||| |||| ||||| |||||    
T  11329135 aattgatcatgaatcttatcacaattcaacaacaacatagca 11329094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 248
Target Start/End: Complemental strand, 14528286 - 14528145
Alignment:
Q  108 aaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatc 206  Q
    |||||||||||||||   ||||||||||||||||  ||||||| || ||||||||||| |||| | | || | ||||||||| ||| |||| | ||||||    
T  14528286 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcattcatacccaagccatgaattaccatcaacaacatcacttagcaacaacaacatc 14528187  T
Q  207 aatagaacaagaatcataactcaatccaaccacaacttagca 248  Q
    ||| || || ||||| || | |||| |||| ||||| |||||    
T  14528186 aattgatcatgaatcttatcacaattcaacaacaacatagca 14528145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 248
Target Start/End: Original strand, 17139481 - 17139622
Alignment:
Q  108 aaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatc 206  Q
    |||| ||||||||||   |||||| |||||||||  ||||||| |||||||||||||| |||| | |||| | ||||||||| ||| |||| | ||||||    
T  17139481 aaactaccaacaacatctcatttcgcaacaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatc 17139580  T
Q  207 aatagaacaagaatcataactcaatccaaccacaacttagca 248  Q
    ||| || || ||||| || | |||| |||| ||||| |||||    
T  17139581 aattgatcatgaatcttatcacaattcaacaacaacatagca 17139622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 19946664 - 19946728
Alignment:
Q  100 atttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagc 164  Q
    |||| |||||||||||||||||||  ||||||||||||||||| ||||||| ||||| ||||||||    
T  19946664 attttacaaaaccaccaacaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagc 19946728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 45860801 - 45860894
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||||| ||||||| |||||||||||| ||||||||||| |||||| || || |  ||||| |||||  |||||||||| | ||||||| ||||    
T  45860801 ttctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatca 45860894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 47785017 - 47784920
Alignment:
Q  112 caccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaa 208  Q
    ||||||||||||  ||||||||| ||||||  |||||| |||| | |||||||| |||| |||| ||| ||||||||| |||||||| | ||||||||    
T  47785017 caccaacaacaactcatttctcaccaacaaatcatgaattatgaacacccaagccatgaatcattaacaacaacatcacttaacaacaacaacatcaa 47784920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 49232396 - 49232437
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctca 134  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  49232396 ttcaccaatttcacaaaaccaccaacaacaatttatttctca 49232437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 55441141 - 55440988
Alignment:
Q  91 aattcaccaattt-cacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatca 188  Q
    ||||||||||||| ||| |||||||||||||||   ||||||||||||| ||  |||||| ||||||||||||||  |||| | |||| | |||||||||    
T  55441141 aattcaccaattttcaccaaaccaccaacaacatctcatttctcaacaaaaaatcatgaattatgcatacccaagtcatgaattatcatcaacaacatca 55441042  T
Q  189 attaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaac 242  Q
     ||| || | | ||||||||| || || ||| | || | |||| ||||||||||    
T  55441041 cttagcatcaacaacatcaattgatcatgaaacttatcacaattcaaccacaac 55440988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 248
Target Start/End: Original strand, 14295404 - 14295552
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 199  Q
    |||||| ||| |||||||||||   ||||||||||||||||  ||||||| ||||| |||||||| |||| | |||| | ||||||||| |||  ||| |    
T  14295404 tttcaccaaaacaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatcacttagaaacaa 14295503  T
Q  200 taacatcaatagaacaagaatcataactcaatccaaccacaacttagca 248  Q
     ||||||||| || || ||||| || | |||| |||| ||||| |||||    
T  14295504 caacatcaattgatcatgaatcttatcacaattcaacaacaacatagca 14295552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 142
Target Start/End: Original strand, 7853948 - 7853990
Alignment:
Q  100 atttcacaaaaccaccaacaacaatccatttctcaacaacaat 142  Q
    |||| |||||||||||||||||||  |||||||||||||||||    
T  7853948 attttacaaaaccaccaacaacaactcatttctcaacaacaat 7853990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 13955150 - 13955064
Alignment:
Q  136 caacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    ||||||| |||||||||||| ||||||||||| |||||| || || |  ||||| |||||  |||||||||| | ||||||| ||||    
T  13955150 caacaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatca 13955064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 13975982 - 13975896
Alignment:
Q  136 caacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    ||||||| |||||||||||| ||||||||||| |||||| || || |  ||||| |||||  |||||||||| | ||||||| ||||    
T  13975982 caacaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatca 13975896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 248
Target Start/End: Complemental strand, 12560510 - 12560369
Alignment:
Q  108 aaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatc 206  Q
    |||| ||||||||||   |||||||||||| |||  ||||||| |||||||||||||| | || | | || ||||||||||| ||| |||| | ||||||    
T  12560510 aaactaccaacaacatctcatttctcaacatcaaatcatgaatcatgcatacccaagccaggaattaacatccacaacatcacttagcaacaacaacatc 12560411  T
Q  207 aatagaacaagaatcataactcaatccaaccacaacttagca 248  Q
     || || || |||||||| | |||| |||| ||||| |||||    
T  12560410 cattgatcatgaatcatatcacaattcaacaacaacatagca 12560369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 122
Target Start/End: Complemental strand, 16934270 - 16934241
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaaca 122  Q
    ||||||||||||||||||||||||||||||    
T  16934270 ttcaccaatttcacaaaaccaccaacaaca 16934241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 41270071 - 41270164
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||||| || |||| |||||||||||| ||||||||||| |||||| || || |  ||||| |||||  |||||||||| | ||||||| ||||    
T  41270071 ttctcatcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatca 41270164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 45581597 - 45581666
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatga 169  Q
    |||||| |||||| ||||||||||  |||||||||||||||   |||||| |||||||||||||| ||||    
T  45581597 tttcaccaaaccaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatga 45581666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 55316215 - 55316308
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||||| || |||| |||||||||||| ||||||||||| |||||| || || |  ||||| |||||  |||||||||| | ||||||| ||||    
T  55316215 ttctcatcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatca 55316308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 11986424 - 11986312
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| ||||||||||||||||||||  |||||||| | || ||||||||| |||| | |   ||||||||| ||||| |||||| |  ||  | |||| |    
T  11986424 caatccatgaatatgcatacccaagtcatgattcacccacaacaacatcagttaatagcatcaacatcaatggaacatgaatcacatatcttttcaacaa 11986325  T
Q  239 caacttagcaaaa 251  Q
    |||||||||||||    
T  11986324 caacttagcaaaa 11986312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 248
Target Start/End: Original strand, 14301031 - 14301179
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 199  Q
    |||||| ||| |||||||||||   |||||||||||||||| |||||||| ||||| ||| |||  |||| | |||| | ||||||||| |||  ||| |    
T  14301031 tttcaccaaaacaccaacaacatctcatttctcaacaacaaaacatgaatcatgcaaaccaaagacatgaataatcatcaacaacatcacttagaaacaa 14301130  T
Q  200 taacatcaatagaacaagaatcataactcaatccaaccacaacttagca 248  Q
     ||||||||| || || ||||| || | |||| |||| ||||| |||||    
T  14301131 caacatcaattgatcatgaatcttatcacaattcaacaacaacatagca 14301179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 9 - 251
Target Start/End: Original strand, 271901 - 272143
Alignment:
Q  9 gcaatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcacaa 108  Q
    ||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||| ||||||||||    
T  271901 gcaatgagattatcatcaacaattaaccacaaccacaacttatgatcatgcattccatcatatttcaacaactacatgtcttaattcactaatttcacaa 272000  T
Q  109 aaccaccaacaacaatccatttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaa 208  Q
    ||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||    
T  272001 aaccaccaacaacaatccatttctctataacaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagctataacaccaa 272100  T
Q  209 tagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    | |||||||||||||||||||||||||||||||||||||||||    
T  272101 ttgaacaagaatcataactcaatccaaccacaacttagcaaaa 272143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 183; Significance: 4e-99; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 9 - 251
Target Start/End: Original strand, 171781 - 172023
Alignment:
Q  9 gcaatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcacaa 108  Q
    ||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  171781 gcaatgagattatcatcaacaattaaccacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgttgtaattcaccaatttcacaa 171880  T
Q  109 aaccaccaacaacaatccatttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaa 208  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  171881 aaccaccaacaacaatccatttcttaacaacaaatcatgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaa 171980  T
Q  209 tagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    | ||||||||||| ||||||||| |||||||||||||||||||    
T  171981 ttgaacaagaatcgtaactcaattcaaccacaacttagcaaaa 172023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 9 - 251
Target Start/End: Original strand, 177484 - 177726
Alignment:
Q  9 gcaatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcacaa 108  Q
    ||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  177484 gcaatgagattatcatcaacaattaaccacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgttgtaattcaccaatttcacaa 177583  T
Q  109 aaccaccaacaacaatccatttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaa 208  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  177584 aaccaccaacaacaatccatttcttaacaacaaatcatgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaa 177683  T
Q  209 tagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    | ||||||||||| ||||||||| |||||||||||||||||||    
T  177684 ttgaacaagaatcgtaactcaattcaaccacaacttagcaaaa 177726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 70913 - 70840
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaag 163  Q
    ||||||| |||||||| ||| |||||||||||   ||||||||||||||||  ||||||| ||||| |||||||    
T  70913 aattcacaaatttcaccaaaacaccaacaacatctcatttctcaacaacaaaccatgaatcatgcaaacccaag 70840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 183; Significance: 4e-99; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 9 - 247
Target Start/End: Complemental strand, 24929178 - 24928940
Alignment:
Q  9 gcaatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcacaa 108  Q
    ||||||||||   ||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  24929178 gcaatgagattatcatcaacaattaaccacaaccagaacttatgatcatgcattccatcatatttcaacaacaacatgtcgtaattcaccaatttcacaa 24929079  T
Q  109 aaccaccaacaacaatccatttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaa 208  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  24929078 aaccaccaacaacaatccatttctcaacaacaaatcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacaaccataacctcaa 24928979  T
Q  209 tagaacaagaatcataactcaatccaaccacaacttagc 247  Q
    | ||||||||  |||||||||||||||||||||||||||    
T  24928978 ttgaacaagagacataactcaatccaaccacaacttagc 24928940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 41507190 - 41507029
Alignment:
Q  9 gcaatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcacaa 108  Q
    ||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||| |    
T  41507190 gcaatgagattatcatcaacaattaaccacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcataactcaccaattccacta 41507091  T
Q  109 aaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatga 169  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||||| |||||||| ||||    
T  41507090 aaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatga 41507029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 2544855 - 2544958
Alignment:
Q  39 aaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaa 138  Q
    |||||||||||||||| |||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  2544855 aaccacaacttatgattatgcataccatcatatttcaacaacaacatgtcgtaattcaccaatttcacaaaaccactaacaacagtccatttctcaacaa 2544954  T
Q  139 caat 142  Q
    ||||    
T  2544955 caat 2544958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 16193973 - 16193890
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16193973 caattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatca 16193890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 43373735 - 43373613
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| | |||    
T  43373735 ttctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaagaatcaaatctc 43373636  T
Q  229 aatccaaccacaacttagcaaaa 251  Q
    ||   ||| ||||||||||||||    
T  43373635 aaattaacaacaacttagcaaaa 43373613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 22907607 - 22907367
Alignment:
Q  11 aatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcata--------attcaccaatt 102  Q
    ||||||||  |||||| |||| |||||||| || ||| ||| ||||| || ||||||| | |||||||||||| | |||||        |||||| ||||    
T  22907607 aatgagatcaacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcatcaattcacaaatt 22907508  T
Q  103 tcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccata 201  Q
    |||| ||| ||||||||||||| ||  |||||| || |||| |||||||||| |||||||||||||||||||||||| |||||||| |||| || | | |    
T  22907507 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaaca 22907408  T
Q  202 acatcaatagaacaagaatcataactcaatccaaccacaac 242  Q
    |||||||| | |||||||||||| |||||| |||| |||||    
T  22907407 acatcaattgcacaagaatcatagctcaattcaactacaac 22907367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 24548988 - 24549071
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||    
T  24548988 caattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatca 24549071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 17345581 - 17345668
Alignment:
Q  144 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaat 231  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| |||||  |||||||||||||||||||||    
T  17345581 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataatatcaactgaacaagaatcataactcaat 17345668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 23217924 - 23218004
Alignment:
Q  22 catcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    ||||| |||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23217924 catcaacaatcaaccacaactacaacttataatcatgcattccatcacatttcaacaacaacatgtcataattcatcaatt 23218004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 248
Target Start/End: Original strand, 23837153 - 23837312
Alignment:
Q  90 taattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatca 188  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||| ||||||  |||||| |||| |||||||||| |||| |||||||| |||||||||    
T  23837153 taattcaccaatttcacaaaaccaccaccaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatca 23837252  T
Q  189 attaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagca 248  Q
     ||| |||| | ||||||||| ||||| || || || | |||| |||| ||||| |||||    
T  23837253 cttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaacaacatagca 23837312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 16405229 - 16405144
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcata 224  Q
    |||| ||||||| |||||||||||||| |||||||||||| | |||||||||||||||| ||||||||||| ||||||||||||||    
T  16405229 caattcatgaatttgcatacccaagcagtgattcatcaactaaaacatcaattaacaacaataacatcaattgaacaagaatcata 16405144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 6774503 - 6774391
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||||||||||||||| |||||||||||| |||||||||| ||||||| ||||||||||| || ||||||||| | |||||   ||| |    
T  6774503 caattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaattaacaa 6774404  T
Q  239 caacttagcaaaa 251  Q
     ||||||||||||    
T  6774403 taacttagcaaaa 6774391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 222947 - 222846
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| |||||||||||||||||||||||| ||||||||| || || ||||| |||||  |||||||||| | |||||||||||| |||||    
T  222947 ttctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactc 222848  T
Q  229 aa 230  Q
    ||    
T  222847 aa 222846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 736570 - 736469
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| |||||||||||||||||||||||| ||||||||| || || ||||| |||||  |||||||||| | |||||||||||| |||||    
T  736570 ttctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactc 736471  T
Q  229 aa 230  Q
    ||    
T  736470 aa 736469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 860465 - 860364
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| |||||||||||||||||||||||| ||||||||| || || ||||| |||||  |||||||||| | |||||||||||| |||||    
T  860465 ttctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactc 860366  T
Q  229 aa 230  Q
    ||    
T  860365 aa 860364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 22981244 - 22981318
Alignment:
Q  28 caattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    |||| ||||||||| ||||||||| |||||||||||||||| | |||||||||||||||||| |||||| |||||    
T  22981244 caatcaaccacaacaacaacttataatcatgcattccatcaaaattcaacaacaacatgtcacaattcatcaatt 22981318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 22321654 - 22321574
Alignment:
Q  22 catcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    ||||| |||| |||||||| |||||| ||| |||||||||||||||||| || ||||| ||||||| ||||||||||||||    
T  22321654 catcaacaatcaaccacaatcacaacatataatcatgcattccatcacaatttaacaataacatgttataattcaccaatt 22321574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 215
Target Start/End: Complemental strand, 23226353 - 23226242
Alignment:
Q  105 acaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataac 203  Q
    ||||||||| ||||||||||||||||||||  | |||  |||||| |||| |||||||||| |||| |||||||| |||| |||| |||||||| | |||    
T  23226353 acaaaaccaacaacaacaatccatttctcataatcaaatcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttaacaacaacaac 23226254  T
Q  204 atcaatagaaca 215  Q
    |||||| |||||    
T  23226253 atcaattgaaca 23226242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 41246614 - 41246733
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    ||||||| |||||||| ||| ||||||||||| | ||||||||||||||||  ||||||| ||||| |||||||| |||| | |||| | ||||||| |     
T  41246614 aattcacaaatttcaccaaaacaccaacaacatttcatttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgac 41246713  T
Q  190 ttaacaaccataacatcaat 209  Q
    |||||||| | |||||||||    
T  41246714 ttaacaacaacaacatcaat 41246733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 21852221 - 21852128
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||||| |||||||  ||||||||||| ||||||||||| ||||||||| || || ||||| |||||  |||||||||| | ||||||||||||    
T  21852221 ttctcatcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatca 21852128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 24717159 - 24717111
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaa 141  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  24717159 ttcaccaattttacaaaaccaccaacaacaatccatttatcaacaacaa 24717111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 21844828 - 21844735
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||||| |||||||  ||||||||||| ||||||||||| ||||||||| || || ||||| |||||  |||||||||| | |||||| |||||    
T  21844828 ttctcatcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaaaaatca 21844735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 30120734 - 30120811
Alignment:
Q  145 atgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    ||||||||||| ||||||||||| ||||||||| || || ||||| |||||  |||||||||||| ||||| ||||||    
T  30120734 atgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatca 30120811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 22736108 - 22735977
Alignment:
Q  112 caccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaata 210  Q
    ||||||||||||  ||||| ||| ||||||| |||||| |||||| |||||||| |||| | | |||| ||||||||| ||| |||  | |||||||||     
T  22736108 caccaacaacaactcatttttcatcaacaattcatgaattatgcacacccaagccatgaattaacaacaacaacatcagttagcaagaacaacatcaatt 22736009  T
Q  211 gaacaagaatcataactcaatccaaccacaac 242  Q
    ||||| ||||| || | ||||||||| |||||    
T  22736008 gaacatgaatcttatcacaatccaacaacaac 22735977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 5238125 - 5238203
Alignment:
Q  11 aatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtca 89  Q
    ||||||||  ||||||||||| |||||||| || ||| ||| ||||| || ||||||| | ||||||||||||||||||    
T  5238125 aatgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtca 5238203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 17285223 - 17285321
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatca 188  Q
    |||||||||||||  |||||| |||||||||||  ||||||||| |  |||  |||||| |||| |||||||||| |||| |||||||| |||||||||    
T  17285223 aattcaccaattttgcaaaactaccaacaacaactcatttctcatcctcaagtcatgaattatgaatacccaagccatgaatcatcaacaacaacatca 17285321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 24661473 - 24661395
Alignment:
Q  11 aatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtca 89  Q
    ||||||||  ||||||||||| |||||||| || ||| ||| ||||| || ||||||| | ||||||||||||||||||    
T  24661473 aatgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtca 24661395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 162
Target Start/End: Complemental strand, 13662561 - 13662492
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaatatgcatacccaa 162  Q
    ||||||||||||||||||||||||||||||||  | |||||| || |||| ||| | |||| ||||||||    
T  13662561 ttcaccaatttcacaaaaccaccaacaacaatttagttctcatcatcaatccataattatgtatacccaa 13662492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 15319455 - 15319414
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctca 134  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  15319455 ttcaccaatttcacaaaaccaccaacaacaatttatttctca 15319414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 15499824 - 15499783
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctca 134  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  15499824 ttcaccaatttcacaaaaccaccaacaacaatttatttctca 15499783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 215
Target Start/End: Complemental strand, 21198439 - 21198318
Alignment:
Q  95 caccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatcaattaa 193  Q
    ||||||||| || ||||||||||||||||  ||||||||| | ||||  |||||| |||| | |||||||| |||| |||| |||  |||||||| |||     
T  21198439 caccaattttaccaaaccaccaacaacaactcatttctcatccacaaatcatgaattatgaacacccaagccatgaatcattaacagcaacatcacttag 21198340  T
Q  194 caaccataacatcaatagaaca 215  Q
    |||| | ||||||||| |||||    
T  21198339 caacaacaacatcaattgaaca 21198318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 22006554 - 22006513
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctca 134  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  22006554 ttcaccaatttcacaaaaccaccaacaacaatttatttctca 22006513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 22089090 - 22089049
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctca 134  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  22089090 ttcaccaatttcacaaaaccaccaacaacaatttatttctca 22089049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 31194615 - 31194490
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    ||||||||||||| |||||  ||||||||||||  ||||| ||| ||||||  ||||||| |||   |||||||| |||| |||||||| |||| ||||     
T  31194615 aattcaccaattttacaaagtcaccaacaacaactcatttttcaccaacaaatcatgaatcatgtgcacccaagctatgaatcatcaacaacaatatcat 31194516  T
Q  190 ttaacaaccataacatcaatagaaca 215  Q
    ||| |||| | ||||||||| |||||    
T  31194515 ttagcaacaacaacatcaattgaaca 31194490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 21259685 - 21259637
Alignment:
Q  33 aaccacaaccacaacttatgatcatgcattccatcacatttcaacaaca 81  Q
    ||||||||| ||||||||| |||||||||||||||| | ||||||||||    
T  21259685 aaccacaacaacaacttataatcatgcattccatcaaaattcaacaaca 21259637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 248
Target Start/End: Complemental strand, 39447057 - 39446899
Alignment:
Q  91 aattcaccaatttc-acaaaaccaccaacaacaatccatttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    |||||||||||||  || |||| ||||||||||   ||||||||||||||||  ||| |  |||||||||||||| |||| | || | | |||||||||     
T  39447057 aattcaccaatttttaccaaactaccaacaacatctcatttctcaacaacaaatcataatcatgcatacccaagccatgaattattatcaacaacatcac 39446958  T
Q  190 ttaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagca 248  Q
    ||| |||| | ||||||||| || || ||||| || | |||| |||| ||||| |||||    
T  39446957 ttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagca 39446899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 43685584 - 43685662
Alignment:
Q  11 aatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtca 89  Q
    ||||||||  |||||| |||| |||||||| || ||| ||| ||||| || ||||||| | ||||||||||||||||||    
T  43685584 aatgagatcaacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtca 43685662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 122
Target Start/End: Complemental strand, 3431577 - 3431548
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaaca 122  Q
    ||||||||||||||||||||||||||||||    
T  3431577 ttcaccaatttcacaaaaccaccaacaaca 3431548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 122
Target Start/End: Complemental strand, 13721224 - 13721195
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaaca 122  Q
    ||||||||||||||||||||||||||||||    
T  13721224 ttcaccaatttcacaaaaccaccaacaaca 13721195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 186
Target Start/End: Complemental strand, 19993346 - 19993249
Alignment:
Q  90 taattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacat 186  Q
    |||||||||| |||||| ||| |||||||||||   ||||||||||||||||| || ||| |||||| |||| ||| |||| | |||| | |||||||    
T  19993346 taattcaccattttcaccaaaacaccaacaacatctcatttctcaacaacaatccaagaattatgcaaaccctagccatgaattatcatcaacaacat 19993249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 29759919 - 29759972
Alignment:
Q  112 caccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagc 164  Q
    |||||||||||| |||||||||||||||||  ||||||| ||||| ||||||||    
T  29759919 caccaacaacaaaccatttctcaacaacaaatcatgaatcatgcaaacccaagc 29759972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 1e-59; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 176
Target Start/End: Original strand, 25601898 - 25602066
Alignment:
Q  9 gcaatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcacaa 108  Q
    ||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25601898 gcaatgagattatcatcaacaattaaccacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcataattcaccaatttcacaa 25601997  T
Q  109 aaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatca 176  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||||| ||| |||| |||||| ||||    
T  25601998 aaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacctaagccatgatttatca 25602066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 91 - 251
Target Start/End: Original strand, 8891199 - 8891360
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    |||||| || |||||| ||| |||||||||| || ||  |||||| |  |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8891199 aattcatcattttcaccaaaacaccaacaaccattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 8891298  T
Q  190 ttaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||| | ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  8891299 ttaatagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaa 8891360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 462744 - 462856
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||| |||||||||||||||||||||| ||| |    
T  462744 caattcatgaatatgcatacccaagcaatgattcatcaatcacgacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaacaa 462843  T
Q  239 caacttagcaaaa 251  Q
    |||||||||||||    
T  462844 caacttagcaaaa 462856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 101 - 251
Target Start/End: Complemental strand, 36982737 - 36982586
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 199  Q
    |||||| ||| ||||||||| ||| ||  |||||| || |||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |    
T  36982737 tttcactaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaaacaatgattcatcaacaacaacatcaattaacaacaa 36982638  T
Q  200 taacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||||||| ||||| ||||||||||||||| |||| ||||||| ||||||    
T  36982637 taacatcaattgaacaggaatcataactcaattcaacaacaacttggcaaaa 36982586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 98 - 251
Target Start/End: Complemental strand, 19795004 - 19794849
Alignment:
Q  98 caatttcac-aaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaaca 195  Q
    ||||||||| |||| ||||||||| ||| ||  |||||| || |||| ||||||||||||||||||||||||||||||||||| | |||||||||||||     
T  19795004 caatttcaccaaaaacaccaacaaaaattcaaattctcatcatcaatccatgaatatgcatacccaagcaatgattcatcaactataacatcaattaacg 19794905  T
Q  196 accataacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
       ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  19794904 gaaataacatcaattgaacaagaatcataactcaattcaacaacaacttagcaaaa 19794849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 24341646 - 24341534
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||| ||||||||||||||||||||||||   |||||||||||||||| ||||||||||| ||||| |||||||| |||||| |||| |    
T  24341646 caattcatgaatatgtatacccaagcaatgattcatcaacaggaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaa 24341547  T
Q  239 caacttagcaaaa 251  Q
    |||||||||||||    
T  24341546 caacttagcaaaa 24341534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 139 - 220
Target Start/End: Complemental strand, 20627570 - 20627489
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaat 220  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||    
T  20627570 caattcatgaatatccatacccaagcaatgattcatcaaccacaacaccaattaacaaccataaaatcaattgaacaagaat 20627489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 230
Target Start/End: Complemental strand, 43643214 - 43643123
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaa 230  Q
    |||| |||||||||||||||||||||| |||||||||||| |||||||||||||||| | ||| ||||||| |||||||||||||| |||||    
T  43643214 caattcatgaatatgcatacccaagcagtgattcatcaactacaacatcaattaacagcaatagcatcaattgaacaagaatcatatctcaa 43643123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 7508101 - 7508008
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaa-tagaacaagaatcataactcaat 231  Q
    |||| |||||||||||||||||||||| |||||||||||| |||||||||| ||||||| |||||||||| || |||| |||||||| ||||||    
T  7508101 caatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaat 7508008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 22274681 - 22274738
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22274681 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaattcatgaat 22274738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 215
Target Start/End: Complemental strand, 25265675 - 25265571
Alignment:
Q  112 caccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaata 210  Q
    ||||||||||||| ||  |||||| || |||| ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||| | |||||||||     
T  25265675 caccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaatt 25265576  T
Q  211 gaaca 215  Q
    |||||    
T  25265575 gaaca 25265571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 19886917 - 19886816
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| |||||||||||||||||||||||| ||||||||| || || ||||| |||||  |||||||||| | |||||||||||| |||||    
T  19886917 ttctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactc 19886818  T
Q  229 aa 230  Q
    ||    
T  19886817 aa 19886816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 215
Target Start/End: Original strand, 19666498 - 19666609
Alignment:
Q  105 acaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataac 203  Q
    ||||||||| |||||||||||||||||||| || ||| ||||||| |||| |||||||||| |||| |||||||| |||| |||| ||| |||| | |||    
T  19666498 acaaaaccaacaacaacaatccatttctcatcatcaaaacatgaattatgaatacccaagccatgaatcatcaacgacaatatcacttagcaacaacaac 19666597  T
Q  204 atcaatagaaca 215  Q
    |||||| |||||    
T  19666598 atcaattgaaca 19666609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 67859 - 67933
Alignment:
Q  28 caattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    |||||||||||||| |||| |||| ||||| |||||||||| ||| ||||||||||||||||||| |||||||||    
T  67859 caattaaccacaacgacaaattataatcatacattccatcatattacaacaacaacatgtcataaatcaccaatt 67933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 22283914 - 22283971
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat 150  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||    
T  22283914 ttcaccaatttcacaaaaccaccaacaacaattcatttctcaacagcaattcatgaat 22283971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 215
Target Start/End: Original strand, 25305405 - 25305526
Alignment:
Q  95 caccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatcaattaa 193  Q
    |||||||||| |||||| |||||||||||  ||||||||| ||||||  |||||| |||| ||||||| || |||| |||||||| ||||||||| |||     
T  25305405 caccaatttcgcaaaactaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaggccatgaatcatcaacaacaacatcacttag 25305504  T
Q  194 caaccataacatcaatagaaca 215  Q
    | || | ||||||||| |||||    
T  25305505 ccacaacaacatcaattgaaca 25305526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 7321586 - 7321644
Alignment:
Q  44 caacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    |||||||| |||||||||||||||| | |||||||||||||||||| |||||| |||||    
T  7321586 caacttataatcatgcattccatcaaaattcaacaacaacatgtcacaattcatcaatt 7321644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 215
Target Start/End: Complemental strand, 19433614 - 19433498
Alignment:
Q  100 atttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacc 198  Q
    |||| |||||||||||||||||||  ||||||||| ||||||  |||||| |||| | |||||||| |||| |||||||| |||| |||  ||| ||||     
T  19433614 attttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaacacccaagccatgaatcatcaacaacaatatctcttagcaaca 19433515  T
Q  199 ataacatcaatagaaca 215  Q
    | ||||||||| |||||    
T  19433514 acaacatcaattgaaca 19433498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 236
Target Start/End: Complemental strand, 24571583 - 24571437
Alignment:
Q  91 aattcaccaatttc-acaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatca 188  Q
    |||||||||||||  || |||||||||||||||   ||||||||||||||||  ||||||| || |||| |||||| |||| | |||| | |||||||||    
T  24571583 aattcaccaatttttaccaaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatacatagccaagc-atgagttatcatcaacaacatca 24571485  T
Q  189 attaacaaccataacatcaatagaacaagaatcataactcaatccaac 236  Q
     |||||||| | ||||||||| || || ||||| |||| |||| ||||    
T  24571484 cttaacaacaacaacatcaattgatcatgaatcttaacacaattcaac 24571437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 12728352 - 12728393
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctca 134  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  12728352 ttcaccaatttcacaaaaccaccaacaacaatttatttctca 12728393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 17396920 - 17396827
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||||| ||||||| |||||||||||| ||||||||||| || ||| || || || ||||| |||||  |||||||||| | ||||||| ||||    
T  17396920 ttctcatcaacaatccatgaatatgcaaacccaagcaattatccattaatcataatatcaaataacattcataacatcatttgaacaagcatca 17396827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 24686077 - 24686036
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctca 134  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  24686077 ttcaccaatttcacaaaaccaccaacaacaatttatttctca 24686036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 34824435 - 34824476
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctca 134  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  34824435 ttcaccaatttcacaaaaccaccaacaacaatttatttctca 34824476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 36890966 - 36890869
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaac 197  Q
    |||||| |||||| |||||||||   |||||||||||||||  || |||| |||||||||||||| |||| | |||| ||||||||||| ||| ||||    
T  36890966 tttcaccaaaccaacaacaacaacttatttctcaacaacaaatcaagaatcatgcatacccaagccatgaataatcatccacaacatcacttagcaac 36890869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 209
Target Start/End: Original strand, 32465822 - 32465933
Alignment:
Q  99 aatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaac 197  Q
    |||||||| ||| |||||||||||   ||||||||||||||||  ||||||| ||||| |||||||| |||| | |||| | ||||||| | | ||||||    
T  32465822 aatttcaccaaaacaccaacaacatctcatttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgactaaacaac 32465921  T
Q  198 cataacatcaat 209  Q
     | |||||||||    
T  32465922 aacaacatcaat 32465933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 28974003 - 28974124
Alignment:
Q  90 taattcaccaattt-cacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatc 187  Q
    |||||||||||||| ||| ||| |||||||||||   ||||||||| ||||||  ||||||| ||||| |||||||| |||| | |||| | |||||||     
T  28974003 taattcaccaattttcactaaaacaccaacaacatctcatttctcatcaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatg 28974102  T
Q  188 aattaacaaccataacatcaat 209  Q
    | ||| |||| | |||||||||    
T  28974103 acttagcaacaacaacatcaat 28974124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 122
Target Start/End: Complemental strand, 42178265 - 42178236
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaaca 122  Q
    ||||||||||||||||||||||||||||||    
T  42178265 ttcaccaatttcacaaaaccaccaacaaca 42178236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 248
Target Start/End: Original strand, 67958 - 68106
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 199  Q
    ||||||||||||| |||||||||   |||||||| || |||  |||||| |||| | || ||||| |||| ||| |||| |||| |||| ||| |||| |    
T  67958 tttcacaaaaccaacaacaacaacttatttctcatcatcaaatcatgaattatgaacacgcaagccatgaatcaccaacaacaatatcacttagcaacaa 68057  T
Q  200 taacatcaatagaacaagaatcataactcaatccaaccacaacttagca 248  Q
     ||||||||| ||||| ||||| || | |||| |||| ||||| |||||    
T  68058 caacatcaattgaacatgaatcttaccacaattcaacaacaacatagca 68106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1734 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold1734
Description:

Target: scaffold1734; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 1273 - 1414
Alignment:
Q  9 gcaatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcacaa 108  Q
    ||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1273 gcaatgagattatcatcaacaattaaccacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcataattcaccaatttcacaa 1372  T
Q  109 aaccaccaacaacaatccatttctcaacaacaatacatgaat 150  Q
    |||||||||||||||||||||||||||||||||  |||||||    
T  1373 aaccaccaacaacaatccatttctcaacaacaaatcatgaat 1414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 169
Target Start/End: Original strand, 29965 - 30126
Alignment:
Q  9 gcaatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcacaa 108  Q
    ||||||||||   ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29965 gcaatgagatcatcatcaacaattaaccacaacaacaacttatgatcatgcattccatcatatttcaacaacaacatgtcataattcaccaatttcacaa 30064  T
Q  109 aaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatga 169  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||||| |||||||| ||||    
T  30065 aaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatga 30126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 31 - 124
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||||| ||||||| |||||||||||| ||||||||||| |||||| || || || ||||| |||||  |||||||||| | ||||||| ||||    
T  31 ttctcatcaacaattcatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattcataacatcatttgaacaagcatca 124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 1e-52; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 22 - 209
Target Start/End: Complemental strand, 17471956 - 17471768
Alignment:
Q  22 catcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcacaaaaccaccaacaac 121  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  17471956 catcaacaattaaccacaaccacaacttatgatcatgcattccatcatgtttcaacaacaacatgtcataattcaccaatttcaccaaaacaccaacaac 17471857  T
Q  122 aa-tccatttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaat 209  Q
    || || | |||||| || |||| ||||||||||| |||||||||||||||||||  || | ||||||| |||||||  | |||||||||    
T  17471856 aattcaaattctcatcatcaattcatgaatatgcgtacccaagcaatgattcattcacaataacatcagttaacaataacaacatcaat 17471768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 9 - 169
Target Start/End: Original strand, 2031684 - 2031845
Alignment:
Q  9 gcaatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcacaa 108  Q
    ||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||  |    
T  2031684 gcaatgagattatcatcaacaattaaccacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcataactcaccaattccatta 2031783  T
Q  109 aaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatga 169  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||||| |||||||| ||||    
T  2031784 aaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatga 2031845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 99 - 251
Target Start/End: Complemental strand, 27182845 - 27182692
Alignment:
Q  99 aatttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaac 197  Q
    |||||||| ||| ||||||||||||| ||  |||||| || |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  27182845 aatttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatactcaagcaatgattcatcaaccacaacatcaattaacagc 27182746  T
Q  198 cataacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  27182745 cataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaa 27182692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 91 - 251
Target Start/End: Original strand, 23506922 - 23507083
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    |||||| || |||||| ||| ||||||||||||| ||  |||||| || |||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  23506922 aattcatcattttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaa 23507021  T
Q  190 ttaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||||||||||||||||| |||||||||||| | |||||   ||| ||||||||||||||    
T  23507022 ttaacaaccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaa 23507083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 18531324 - 18531212
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||| |||||| ||||||||||||||||| |||||||||||||||| | ||||||||||| ||||| |||||||| |||||| |||| |    
T  18531324 caattcatgaatatgtatacccgagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaattcaacaa 18531225  T
Q  239 caacttagcaaaa 251  Q
    |||||||||||||    
T  18531224 caacttagcaaaa 18531212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 22054090 - 22053978
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||| | |||||||||||||||||||||| |||||||||||||||| | ||||||||||| ||||| |||||||| |||||| |||| |    
T  22054090 caattcatgaatatgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaattcaacaa 22053991  T
Q  239 caacttagcaaaa 251  Q
    |||||||||||||    
T  22053990 caacttagcaaaa 22053978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 34939289 - 34939376
Alignment:
Q  144 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaat 231  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||| | ||||||||||  |||||||||||||||||||||    
T  34939289 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacagcaataacatcaactgaacaagaatcataactcaat 34939376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 25004863 - 25004943
Alignment:
Q  22 catcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    ||||| |||||||||||||||||||||||| |||||||||| ||||| ||| ||||||||||||||||||| |||||||||    
T  25004863 catcaacaattaaccacaaccacaacttataatcatgcatttcatcatattccaacaacaacatgtcataaatcaccaatt 25004943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 12370 - 12471
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| |||||||||||||||||||||||| ||||||||| || || ||||| |||||  |||||||||| | |||||||||||| |||||    
T  12370 ttctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactc 12469  T
Q  229 aa 230  Q
    ||    
T  12470 aa 12471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 25426624 - 25426725
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| |||||||||||||||||||||||| ||||||||| || || ||||| |||||  |||||||||| | |||||||||||| |||||    
T  25426624 ttctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactc 25426723  T
Q  229 aa 230  Q
    ||    
T  25426724 aa 25426725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 18778248 - 18778147
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| |||||||||||||||||||||||| ||||||||| || || ||||| ||| |  |||||||||| | |||||||||||| |||||    
T  18778248 ttctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataatattcataacatcatttgaacaagaatcacaactc 18778149  T
Q  229 aa 230  Q
    ||    
T  18778148 aa 18778147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 21073851 - 21073750
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| |||||||||||||||||||||||| ||||||||| || || ||||| |||||   ||||||||| | |||||||||||| |||||    
T  21073851 ttctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattgataacatcatttgaacaagaatcacaactc 21073752  T
Q  229 aa 230  Q
    ||    
T  21073751 aa 21073750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 22366737 - 22366636
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| |||||||||||||||||||||||| ||||||||| || || ||||| |||||  |||||||||| | ||||||| |||| |||||    
T  22366737 ttctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagcatcacaactc 22366638  T
Q  229 aa 230  Q
    ||    
T  22366637 aa 22366636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 19499895 - 19499996
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| |||||||||||||||| ||||||| ||| ||||| || || ||||| |||||  |||||||||| | |||||||||||| |||||    
T  19499895 ttctcatcatcaatccatgaatatgcataccaaagcaattattaatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactc 19499994  T
Q  229 aa 230  Q
    ||    
T  19499995 aa 19499996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 246
Target Start/End: Complemental strand, 43443641 - 43443534
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||||| ||||||||||| ||||||||| || || ||||| |||||  |||||||||| | |||||||| ||| | |||||  |||| |    
T  43443641 caatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagactcacatctcaaatcaacaa 43443542  T
Q  239 caacttag 246  Q
    ||||||||    
T  43443541 caacttag 43443534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 4200226 - 4200148
Alignment:
Q  144 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||||||||||| ||||||||||| ||||||||| || || ||||| |||||  |||||||||||| ||||| ||||||    
T  4200226 catgaatatgcaaacccaagcaatcattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatca 4200148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 27009837 - 27009930
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||||| ||||||| |||||||||||| ||||||||||| |||||| || || || ||||| |||||  |||||||||| | ||||||| ||||    
T  27009837 ttctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattcataacatcatttgaacaagcatca 27009930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 29190553 - 29190481
Alignment:
Q  107 aaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaac 178  Q
    |||| ||||||||||||| ||  ||||||  | |||| |||||||||||||||||||||||||||||||||||    
T  29190553 aaaaacaccaacaacaattcaaattctcataatcaattcatgaatatgcatacccaagcaatgattcatcaac 29190481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 20623007 - 20623085
Alignment:
Q  11 aatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtca 89  Q
    ||||||||  ||||||||||| |||||||| || ||| ||| ||||| || ||||||| | ||||||||||||||||||    
T  20623007 aatgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtca 20623085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 21233753 - 21233675
Alignment:
Q  11 aatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtca 89  Q
    ||||||||  ||||||||||| |||||||| || ||| ||| ||||| || ||||||| | ||||||||||||||||||    
T  21233753 aatgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtca 21233675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 1219816 - 1219775
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctca 134  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  1219816 ttcaccaatttcacaaaaccaccaacaacaatttatttctca 1219775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 11342661 - 11342714
Alignment:
Q  112 caccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagc 164  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||| ||||||||    
T  11342661 caccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagc 11342714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 22883380 - 22883339
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctca 134  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  22883380 ttcaccaatttcacaaaaccaccaacaacaatttatttctca 22883339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 29188486 - 29188417
Alignment:
Q  182 aacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||||||||||||||||||||||||| || ||||||||| | |||||   ||| | ||||||||||||    
T  29188486 aacatcaattaacaaccataacatcaattgagcaagaatcaaatctcaaattaacaataacttagcaaaa 29188417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 122
Target Start/End: Complemental strand, 9730679 - 9730650
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaaca 122  Q
    ||||||||||||||||||||||||||||||    
T  9730679 ttcaccaatttcacaaaaccaccaacaaca 9730650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 122
Target Start/End: Original strand, 23514521 - 23514550
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaaca 122  Q
    ||||||||||||||||||||||||||||||    
T  23514521 ttcaccaatttcacaaaaccaccaacaaca 23514550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 4865218 - 4865338
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatg-attcatcaaccacaacatca 188  Q
    ||||||||| |||||  ||| |||||||||||   ||| ||||||||||||| || ||| |||||| |||||||| ||| | | |||| | ||||||| |    
T  4865218 aattcaccattttcatcaaaacaccaacaacacctcatctctcaacaacaattcaagaattatgcaaacccaagccatgaaattatcatcaacaacatga 4865317  T
Q  189 attaacaaccataacatcaat 209  Q
    || ||||||||||||| ||||    
T  4865318 ataaacaaccataacaacaat 4865338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 9e-51; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 91 - 251
Target Start/End: Original strand, 13246387 - 13246548
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    ||||||| |||||||| ||| ||||||||||||| ||  |||||| |  |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13246387 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 13246486  T
Q  190 ttaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||| ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  13246487 ttaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaa 13246548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 91 - 251
Target Start/End: Complemental strand, 54118550 - 54118389
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    ||||||||| |||||| ||| ||||||||||||| ||  |||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  54118550 aattcaccattttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 54118451  T
Q  190 ttaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||||| ||||||||||| ||||||||||||||||| |||| ||| ||||||||||||||    
T  54118450 ttaacaactataacatcaattgaacaagaatcataactaaatctaacaacaacttagcaaaa 54118389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 34395131 - 34395309
Alignment:
Q  9 gcaatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcacaa 108  Q
    ||||||||||   ||||| ||||||||||||| ||||||||||||||| |||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  34395131 gcaatgagattatcatcaacaattaaccacaatcacaacttatgatcaagcattccatcatgtttcaacaacaacatgtcgtaattcaccaatttcacaa 34395230  T
Q  109 aaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacat 186  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||||| || ||||| |||| | |||| | |||||||    
T  34395231 aaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaactcaagccatgaattatcatcaacaacat 34395309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 139 - 232
Target Start/End: Original strand, 111401 - 111494
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatc 232  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  111401 caattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataactcaatc 111494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 15675346 - 15675234
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| |||||||| |||||| |||| |    
T  15675346 caattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaa 15675247  T
Q  239 caacttagcaaaa 251  Q
    |||||||||||||    
T  15675246 caacttagcaaaa 15675234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 31115635 - 31115747
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| |||||||| |||||| |||| |    
T  31115635 caattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaa 31115734  T
Q  239 caacttagcaaaa 251  Q
    |||||||| ||||    
T  31115735 caacttaggaaaa 31115747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 26680070 - 26680310
Alignment:
Q  11 aatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcacc--------aatt 102  Q
    ||||||||  |||||| |||| |||||||| || ||| ||| ||||| || ||||||| | |||||||||||| | ||||| |||| |        ||||    
T  26680070 aatgagatcaacatcaacaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacttatcatatttcatcgattcccaaatt 26680169  T
Q  103 tcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccata 201  Q
    |||| ||| ||||||||||||| ||  |||||| || |||| |||||||||| |||||||||||||||||||||||| |||||||| |||| || | | |    
T  26680170 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaaca 26680269  T
Q  202 acatcaatagaacaagaatcataactcaatccaaccacaac 242  Q
    |||||||| | |||||||||||| |||||| |||| |||||    
T  26680270 acatcaattgcacaagaatcatagctcaattcaactacaac 26680310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 5682824 - 5682753
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaag 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||| |||||||    
T  5682824 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaag 5682753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 19559422 - 19559481
Alignment:
Q  34 accacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataat 93  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  19559422 accacaaccacaacttataatcatgcattccatcacaattcaacaacaacatgtcataat 19559481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 34177830 - 34177767
Alignment:
Q  39 aaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  34177830 aaccacaacttataatcatgcattccatcatatttcaacaacaacaagtcataattcaccaatt 34177767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 215
Target Start/End: Complemental strand, 41166233 - 41166112
Alignment:
Q  95 caccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaa 193  Q
    ||||||||||||||||||||| |||||||  ||||||||| ||||||  ||| | | ||| |||||||||| ||||||||||||| ||||||||| |||     
T  41166233 caccaatttcacaaaaccacccacaacaactcatttctcatcaacaaatcataagttatgaatacccaagccatgattcatcaacaacaacatcacttag 41166134  T
Q  194 caaccataacatcaatagaaca 215  Q
    |||| | ||||||||| |||||    
T  41166133 caacaacaacatcaattgaaca 41166112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 25119505 - 25119457
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaa 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25119505 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaa 25119457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 246
Target Start/End: Original strand, 10644215 - 10644332
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| |||||||||||| ||||||||||| ||||||||| || || ||||| |||||  |||||||||||| ||||| |||||| | |||    
T  10644215 ttctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctc 10644314  T
Q  229 aatccaaccacaacttag 246  Q
    ||  |||| |||||||||    
T  10644315 aaatcaacaacaacttag 10644332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 14901187 - 14901307
Alignment:
Q  90 taattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatca 188  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||| || |||| |||||| |||||| ||||| |  |||| |||||||| ||| |||||    
T  14901187 taatttaccaattttacaaaaccaccaacaacaacccatttctcatcatcaattcatgaattatgcacacccatgtcatgaatcatcaacaacagcatca 14901286  T
Q  189 attaacaaccataacatcaat 209  Q
     ||| |||| | |||||||||    
T  14901287 cttagcaacaacaacatcaat 14901307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 248
Target Start/End: Complemental strand, 18494620 - 18494461
Alignment:
Q  91 aattcaccaattt-cacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatca 188  Q
    ||||||||||||| ||| |||||||||||||||   ||||||||||||||||  ||||||| |||||||||||||| |||| | | || | |||||||||    
T  18494620 aattcaccaattttcaccaaaccaccaacaacatctcatttctcaacaacaagtcatgaatcatgcatacccaagccatgagttaccatcaacaacatca 18494521  T
Q  189 attaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagca 248  Q
     |||||||| | | || |||| || || ||||| |||| |||| |||| ||||| |||||    
T  18494520 cttaacaacaacagcaacaattgatcatgaatcttaacacaattcaacaacaacatagca 18494461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 47357650 - 47357751
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| ||||||||| ||||||||| |||| ||||||||| || || ||||| |||||  |||||||||| | |||||||||||| |||||    
T  47357650 ttctcatcatcaatccatgaatatacatacccaatcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactc 47357749  T
Q  229 aa 230  Q
    ||    
T  47357750 aa 47357751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 10104488 - 10104436
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaatt 191  Q
    |||| |||||||||| |||||||||||||||||||||||| ||||||||||||    
T  10104488 caattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaatt 10104436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 14951728 - 14951792
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagc 164  Q
    |||||| ||| ||||||||||||||||||||||||||||||  ||||||| ||||| ||||||||    
T  14951728 tttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagc 14951792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 23270225 - 23270106
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    ||||||||| |||||| ||| |||||||||||   ||||||||||| ||||  ||||||| ||||| |||||||| |||| | |||| | ||||||| |     
T  23270225 aattcaccattttcacgaaaacaccaacaacatctcatttctcaaccacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgac 23270126  T
Q  190 ttaacaaccataacatcaat 209  Q
    |||||||| | |||||||||    
T  23270125 ttaacaacaacaacatcaat 23270106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 18168930 - 18168971
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctca 134  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  18168930 ttcaccaatttcacaaaaccaccaacaacaatttatttctca 18168971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 40885801 - 40885740
Alignment:
Q  130 tctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaatt 191  Q
    ||||| || |||| || ||||||||||||| |||| ||||||||||||| ||||||||||||    
T  40885801 tctcatcaccaattcaagaatatgcatacctaagccatgattcatcaacaacaacatcaatt 40885740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 191
Target Start/End: Complemental strand, 47535337 - 47535236
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    ||||||||||||| ||||||||| |||||||||  |||||||||  |||||  |||||| |||| | || ||||| |||| |||||||| ||||| ||||    
T  47535337 aattcaccaattttacaaaaccatcaacaacaactcatttctcattaacaaatcatgaattatgaacactcaagccatgaatcatcaacaacaacgtcaa 47535238  T
Q  190 tt 191  Q
    ||    
T  47535237 tt 47535236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 186
Target Start/End: Original strand, 44055871 - 44055967
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacat 186  Q
    ||||||| |||||||| ||| |||||||||||   ||||||||||||||||  ||||||| ||||| |||||||| |||| | |||| | |||||||    
T  44055871 aattcacaaatttcaccaaaacaccaacaacatctcatttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacat 44055967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 248
Target Start/End: Complemental strand, 13809766 - 13809643
Alignment:
Q  126 catttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcata 224  Q
    |||||||||||||| |  ||||||| ||||||| |||||| |||| | |||| | ||||||||||||| |||| | ||||||||| || || ||||| ||    
T  13809766 catttctcaacaaccaatcatgaatcatgcatatccaagccatgaattatcatcaacaacatcaattagcaacaacaacatcaattgatcatgaatctta 13809667  T
Q  225 actcaatccaaccacaacttagca 248  Q
     | |||| |||| ||||| |||||    
T  13809666 tcacaattcaacaacaacatagca 13809643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 102
Target Start/End: Original strand, 9795314 - 9795344
Alignment:
Q  72 ttcaacaacaacatgtcataattcaccaatt 102  Q
    |||||||||||||||||||||||||||||||    
T  9795314 ttcaacaacaacatgtcataattcaccaatt 9795344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 10104445 - 10104395
Alignment:
Q  201 aacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    ||||||||| ||||| |||||||| |||||| |||| ||||||||||||||    
T  10104445 aacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaa 10104395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 186
Target Start/End: Original strand, 16732124 - 16732221
Alignment:
Q  91 aattcaccaa-tttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacat 186  Q
    |||||||||| |||||| ||| |||||||||||   ||||||||||||||||  ||||||| ||||| |||||||| |||| | |||| | |||||||    
T  16732124 aattcaccaagtttcaccaaaacaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacat 16732221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 163
Target Start/End: Complemental strand, 24570 - 24415
Alignment:
Q  9 gcaatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcacaa 108  Q
    ||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||   |    
T  24570 gcaatgagattatcatcaacaattaaccacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcttaattcaccaatttcttta 24471  T
Q  109 aaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaag 163  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||||| |||||||    
T  24470 aaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaag 24415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 101 - 251
Target Start/End: Complemental strand, 37209 - 37058
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 199  Q
    |||||| ||| ||||||||||||| ||  |||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  37209 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagcca 37110  T
Q  200 taacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||||||||||    
T  37109 taacgtcaattgaacaagattcataactcaatccaaccacaacttagcaaaa 37058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 97; Significance: 9e-48; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 253362 - 253206
Alignment:
Q  9 gcaatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcacaa 108  Q
    ||||||||||   ||||| |||||||||| | ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  253362 gcaatgagattatcatcaacaattaaccaaacccacaacttataatcatgcattccatcatatttcaacaacaacatgtcataattcaccaatttcacaa 253263  T
Q  109 aaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagc 164  Q
    |||||||||||||||||||||||||| ||| ||  ||||||| ||||| ||||||||    
T  253262 aaccaccaacaacaatccatttctcatcaagaaatcatgaatcatgcaaacccaagc 253206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 144 - 251
Target Start/End: Complemental strand, 247694 - 247587
Alignment:
Q  144 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaact 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||| ||| ||||||    
T  247694 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaatctaacaacaact 247595  T
Q  244 tagcaaaa 251  Q
    ||||||||    
T  247594 tagcaaaa 247587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 3406 - 3525
Alignment:
Q  22 catcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcacaaaaccaccaacaac 121  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  3406 catcaacaattaaccacaaccacaacttatgatcatgcattccatcatatttcaacaacaacatgtcataactcaccaattccactaaaccaccaacaac 3505  T
Q  122 aatccatttctcaacaacaa 141  Q
    | ||||||||||||||||||    
T  3506 attccatttctcaacaacaa 3525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 112 - 251
Target Start/End: Complemental strand, 37844735 - 37844596
Alignment:
Q  112 caccaacaacaatccatttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatag 211  Q
    ||||||||||| || | |||||| |  |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  37844735 caccaacaacattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgactcatcaaccacaacatcaattaacaaccataacatcaattg 37844636  T
Q  212 aacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  37844635 aacaagaatcataactcaatctaacaacaacttagcaaaa 37844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 91 - 251
Target Start/End: Original strand, 20445636 - 20445797
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    |||||| || |||||| ||| ||||||||||||| ||  |||||| |  |||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  20445636 aattcatcattttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaa 20445735  T
Q  190 ttaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||| ||||||||||||| || ||||||||||||| |||| |||| ||||||||||||||    
T  20445736 ttaacagccataacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaa 20445797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 91 - 251
Target Start/End: Original strand, 20531401 - 20531562
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    |||||| || |||||| ||| ||||||||||||| ||  |||||| |  |||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  20531401 aattcatcattttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaa 20531500  T
Q  190 ttaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||| ||||||||||||| || ||||||||||||| |||| |||| ||||||||||||||    
T  20531501 ttaacagccataacatcaattgatcaagaatcataacacaattcaacaacaacttagcaaaa 20531562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 91 - 251
Target Start/End: Complemental strand, 20893932 - 20893771
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    ||||||| ||||||   ||| ||||||||||||| ||  |||||| || ||||  |||||||||||||||||| ||||||||||||||||||||||||||    
T  20893932 aattcacaaatttcttcaaaacaccaacaacaattcaaattctcatcatcaatttatgaatatgcatacccaaacaatgattcatcaaccacaacatcaa 20893833  T
Q  190 ttaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    ||||||  |||||||||||| ||||||||||||||| |||||| ||| ||||||||||||||    
T  20893832 ttaacagtcataacatcaattgaacaagaatcataaatcaatctaacaacaacttagcaaaa 20893771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 101 - 222
Target Start/End: Original strand, 20913004 - 20913126
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 199  Q
    |||||| ||| ||||||||||||| ||  |||||| || |||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  20913004 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaagatcaattaacaacca 20913103  T
Q  200 taacatcaatagaacaagaatca 222  Q
    |||||||||| ||||||||||||    
T  20913104 taacatcaattgaacaagaatca 20913126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 101 - 251
Target Start/End: Original strand, 20931312 - 20931463
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 199  Q
    |||||| ||| ||||||||||||| ||  |||||| ||  ||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  20931312 tttcaccaaaacaccaacaacaattcaaattctcatcattaattcatgaatatgcatacccaagaaattattcatcaaccacaacatcaattaacaacca 20931411  T
Q  200 taacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||||||| |||||||||||| | |||||   ||| |||| |||||||||    
T  20931412 taacatcaattgaacaagaatcaaatctcaaattaacaacaatttagcaaaa 20931463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 2116260 - 2116343
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||    
T  2116260 caattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatca 2116343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 22227815 - 22227927
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||||| ||||||||||| ||||||||| || ||||||||||||||  |||||||||||| |||||||||||| | |||||   ||| |    
T  22227815 caatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaattaacaa 22227914  T
Q  239 caacttagcaaaa 251  Q
    |||||||||||||    
T  22227915 caacttagcaaaa 22227927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 22232512 - 22232624
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||||| ||||||||||| ||||||||| || ||||||||||||||  |||||||||||| |||||||||||| | |||||   ||| |    
T  22232512 caatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaattaacaa 22232611  T
Q  239 caacttagcaaaa 251  Q
    |||||||||||||    
T  22232612 caacttagcaaaa 22232624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 41394228 - 41394340
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| ||||||||||||||||||| || |||||||||||| |||||||||| ||||||| ||||||||||| || ||||||||| | |||||   ||| |    
T  41394228 caatccatgaatatgcatacccaatcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaacataacaa 41394327  T
Q  239 caacttagcaaaa 251  Q
     ||||||||||||    
T  41394328 taacttagcaaaa 41394340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 214
Target Start/End: Original strand, 20177131 - 20177255
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    |||||||||||||||||||||||||||||||||  ||||||||  ||||||  |||||| |||| ||| |||||| |||| |||||| | |||||||||     
T  20177131 aattcaccaatttcacaaaaccaccaacaacaactcatttctcttcaacaaatcatgaattatgaatatccaagccatgaatcatcatcaacaacatcac 20177230  T
Q  190 ttaacaaccataacatcaatagaac 214  Q
    ||| |||| | ||||||||| ||||    
T  20177231 ttagcaacaacaacatcaattgaac 20177255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 13377131 - 13377012
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    |||||||||||||||||||||| ||||||||||| ||||||||| ||||||  |||||| |||| |||| ||||| |||| ||| || | |||||||||     
T  13377131 aattcaccaatttcacaaaaccgccaacaacaattcatttctcatcaacaaatcatgaattatgaatactcaagccatgaatcaacatcaacaacatcac 13377032  T
Q  190 ttaacaaccataacatcaat 209  Q
    ||| |||| | |||||||||    
T  13377031 ttagcaacaacaacatcaat 13377012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 44035267 - 44035219
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaa 141  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44035267 ttcaccaattgcacaaaaccaccaacaacaatccatttctcaacaacaa 44035219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 45051448 - 45051500
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaatt 191  Q
    |||| |||||||||||||||||||||| |||||||||||| | ||||||||||    
T  45051448 caattcatgaatatgcatacccaagcagtgattcatcaacaataacatcaatt 45051500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 15861713 - 15861650
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaag 163  Q
    |||||| ||| ||||||||||||||||||||||||||||||  ||||||| ||||| |||||||    
T  15861713 tttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaag 15861650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 22366985 - 22367048
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaag 163  Q
    |||||| ||| ||||||||||||||||||||||||||||||  ||||||| ||||| |||||||    
T  22366985 tttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaag 22367048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 215
Target Start/End: Complemental strand, 41229231 - 41229105
Alignment:
Q  90 taattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatca 188  Q
    |||||||||||||| || |||| |||||||||||  ||||||||| | ||||  |||||| |||| | || ||||| |||| |||| ||| |||||||||    
T  41229231 taattcaccaattttaccaaactaccaacaacaactcatttctcatccacaaatcatgaattatgaacactcaagccatgaatcattaacaacaacatca 41229132  T
Q  189 attaacaaccataacatcaatagaaca 215  Q
     ||| |||| | ||||||||| |||||    
T  41229131 cttagcaacaacaacatcaattgaaca 41229105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 18060054 - 18060013
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctca 134  Q
    ||||||||||||||||||||||||||||||||  ||||||||    
T  18060054 ttcaccaatttcacaaaaccaccaacaacaatttatttctca 18060013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 49967606 - 49967725
Alignment:
Q  90 taattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatca 188  Q
    |||||||| |||||||| ||| |||||||||||   |||| |||||||||||  ||||||| ||||| ||| ||||||||| | |||| | ||||||| |    
T  49967606 taattcacaaatttcaccaaaacaccaacaacatctcattcctcaacaacaa-ccatgaatcatgcaaaccgaagcaatgaattatcatcaacaacatga 49967704  T
Q  189 attaacaaccataacatcaat 209  Q
     |||||||| | |||||||||    
T  49967705 cttaacaacaacaacatcaat 49967725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 51627956 - 51627836
Alignment:
Q  91 aattcaccaatttc-acaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatca 188  Q
    |||||||||||||  || |||||||||||||||   |||||||||||| |||  ||||||| |||||||||||||| |||| | |||| | ||| |||||    
T  51627956 aattcaccaatttttaccaaaccaccaacaacatctcatttctcaacagcaaatcatgaatcatgcatacccaagccatgaattatcatcaacatcatca 51627857  T
Q  189 attaacaaccataacatcaat 209  Q
     ||| |||| | |||||||||    
T  51627856 cttagcaacaacaacatcaat 51627836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 22143635 - 22143533
Alignment:
Q  108 aaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatc 206  Q
    |||||| ||||||||||| |||||||| || |||  |||||| |||| |||||||||| |||| |||||||| |||| |||| ||| || | | ||||||    
T  22143635 aaaccaacaacaacaatcgatttctcatcatcaaatcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttagcagcaacaacatc 22143536  T
Q  207 aat 209  Q
    |||    
T  22143535 aat 22143533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 51452530 - 51452608
Alignment:
Q  11 aatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtca 89  Q
    ||||||||  ||||||||||| ||| |||| || ||| ||| ||||| || ||||||| | ||||||||||||||||||    
T  51452530 aatgagatcaacatcatcaatcaactacaatcataacatataatcatacactccatcataattcaacaacaacatgtca 51452608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 5072644 - 5072551
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||||| || |||| |||||||||||| ||||||||||| |||||| || || |  ||||| |||||  |||||||||| | ||||||| ||||    
T  5072644 ttctcatcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatca 5072551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 18601374 - 18601281
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||||| || |||| |||||||||||| ||||||||||| |||||| || || |  ||||| |||||  |||||||||| | ||||||| ||||    
T  18601374 ttctcatcatcaatccatgaatatgcaaacccaagcaattattcattaatcatattatcaaataacattcataacatcatttgaacaagcatca 18601281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 122
Target Start/End: Complemental strand, 21650336 - 21650307
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaaca 122  Q
    ||||||||||||||||||||||||||||||    
T  21650336 ttcaccaatttcacaaaaccaccaacaaca 21650307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 21859977 - 21860017
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccatttctcaacaacaa 141  Q
    |||||| |||||| |||||||||| ||||||||||||||||    
T  21859977 tttcaccaaaccaacaacaacaattcatttctcaacaacaa 21860017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 91 - 231
Target Start/End: Original strand, 9339 - 9480
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    ||||||||| |||||| ||| ||||||||||||| ||  |||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9339 aattcaccattttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 9438  T
Q  190 ttaacaaccataacatcaatagaacaagaatcataactcaat 231  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  9439 ttaacagccataacatcaattgaacaagaatcataactcaat 9480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 92; Significance: 9e-45; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 101 - 251
Target Start/End: Original strand, 48565 - 48716
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 199  Q
    |||||| ||| ||||||||||||| ||  |||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  48565 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagcca 48664  T
Q  200 taacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||||||| |||||||||||||||||||||| | | ||||||||||||||    
T  48665 taacatcaattgaacaagaatcataactcaatctagcaacaacttagcaaaa 48716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 36089 - 36182
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||||| || |||| |||||||||||| ||||||||||| ||||||||| || |  ||||| |||||  ||||||||| || ||||| ||||||    
T  36089 ttctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcatattatcaaataacattcataacatctattgaacatgaatca 36182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 154303 - 154262
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctca 134  Q
    |||||||||||||||||||||||| |||||||  ||||||||    
T  154303 ttcaccaatttcacaaaaccaccatcaacaatttatttctca 154262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 138
Target Start/End: Complemental strand, 13647 - 13537
Alignment:
Q  28 caattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcacaaaaccaccaacaacaatcca 127  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  13647 caattaaccacaaccacaatttatgatcatgcattccatcatatttcaacaagaacatgtcgtaattcaccaatttcacaaaaccactaacaacaatcca 13548  T
Q  128 tttctcaacaa 138  Q
    |||||||||||    
T  13547 tttctcaacaa 13537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 116358 - 116284
Alignment:
Q  28 caattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    |||||||| ||||||||||||||| |||||| |||| | ||||  |||| |||||||||||| |||||| |||||    
T  116358 caattaacaacaaccacaacttataatcatgtattcaaccacaaatcaataacaacatgtcacaattcatcaatt 116284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 1e-43; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 91 - 251
Target Start/End: Complemental strand, 11581045 - 11580884
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    |||||| || |||||| ||| ||||||||||||| ||  |||||  |  |||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  11581045 aattcatcattttcaccaaaacaccaacaacaattcaaattctcgtcctcaattcatgaatatgtatacccaagcaatgattcatcaaccacaacatcaa 11580946  T
Q  190 ttaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||| ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  11580945 ttaacagccataacatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaa 11580884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 91 - 251
Target Start/End: Complemental strand, 13037320 - 13037159
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    ||||||| |||||||| ||| ||||||||||||| ||  |||||| |  |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13037320 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 13037221  T
Q  190 ttaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||| |  |||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||    
T  13037220 ttaatattcataacattaattgaacaagaatcataactcaatctaacaacaacttagcaaaa 13037159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 3059972 - 3060084
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||| ||| |    
T  3059972 caattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaatctaacaa 3060071  T
Q  239 caacttagcaaaa 251  Q
    ||||||| |||||    
T  3060072 caacttaacaaaa 3060084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 47481288 - 47481176
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| ||||||||||||||||||||||||||||||||||| | |||||||||||| | | ||||||||||| ||||||||||||||||||||| |||| |    
T  47481288 caattcatgaatatgcatacccaagcaatgattcatcaacaaaaacatcaattaagagcgataacatcaattgaacaagaatcataactcaattcaacaa 47481189  T
Q  239 caacttagcaaaa 251  Q
    |||||||||||||    
T  47481188 caacttagcaaaa 47481176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 101 - 222
Target Start/End: Original strand, 36052634 - 36052756
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 199  Q
    |||||| ||| ||||||||||||| ||  |||||| || |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  36052634 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaacca 36052733  T
Q  200 taacatcaatagaacaagaatca 222  Q
     ||||||||| ||||||||||||    
T  36052734 caacatcaattgaacaagaatca 36052756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 7292886 - 7293126
Alignment:
Q  11 aatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcata--------attcaccaatt 102  Q
    ||||||||  |||||| |||| |||||||| |||||| ||| ||||| || ||||||| | |||||||||||| | |||||        |||||| ||||    
T  7292886 aatgagatcaacatcaacaatcaaccacaatcacaacatataatcatacactccatcataattcaacaacaacttatcatatttcatcaattcacaaatt 7292985  T
Q  103 tcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccata 201  Q
    |||| ||| ||||||||||||| ||  |||||| || |||| |||||||||| |||||||||||||||||||||||| |||||||| |||| || | | |    
T  7292986 tcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaaca 7293085  T
Q  202 acatcaatagaacaagaatcataactcaatccaaccacaac 242  Q
    |||||||| | |||||||||||| |||||| |||| |||||    
T  7293086 acatcaattgcacaagaatcatagctcaattcaacaacaac 7293126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 144 - 251
Target Start/End: Original strand, 16211777 - 16211884
Alignment:
Q  144 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaact 243  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| | |||||   ||| ||||||    
T  16211777 catgaatatgcatacccaagcaatgaatcatcaaccacaacatcaattaacaaccataacatcaatttaacaagaatcaaatctcaaattaacaacaact 16211876  T
Q  244 tagcaaaa 251  Q
    ||||||||    
T  16211877 tagcaaaa 16211884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 13320984 - 13321133
Alignment:
Q  104 cacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataa 202  Q
    ||||||| ||||||||||||||||  |||||| || |||| ||||||| |||| |||||||  ||||||||||||| |||||||||||||||||| ||||    
T  13320984 cacaaaaacaccaacaacaatccaaattctcatcatcaattcatgaatgtgcaaacccaagtcatgattcatcaacaacaacatcaattaacaacaataa 13321083  T
Q  203 catcaatagaacaagaatcataactcaatccaacca-caacttagcaaaa 251  Q
    ||||||| ||||| |||||||| |||||| |||| | |||||||||||||    
T  13321084 catcaattgaacatgaatcatatctcaattcaacaatcaacttagcaaaa 13321133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 18254102 - 18253980
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| ||||||||||||||| || ||||| ||||||||| ||||||||||||||||| ||||||||||||| |||||||||||| | |||    
T  18254102 ttctcatcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctc 18254003  T
Q  229 aatccaaccacaacttagcaaaa 251  Q
    ||   ||| ||||||||||||||    
T  18254002 aaattaacaacaacttagcaaaa 18253980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 16479207 - 16479124
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||| |||||||||||||||||||||| |||||||||||| |||||||||| ||||||| ||||||||||| || |||||||||    
T  16479207 caatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatca 16479124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 13352011 - 13352079
Alignment:
Q  34 accacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    |||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||| |||||    
T  13352011 accacaaccacaacttataatcatgcattccatcccaattcaacaacaacatgtcataattcatcaatt 13352079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 17224229 - 17224104
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    ||||||||||||| |||||||||||||||||||  ||||||||| ||||||  |||||| |||| |||||||||| |||| ||||||   |||||||||     
T  17224229 aattcaccaattttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcattaacaacatcac 17224130  T
Q  190 ttaacaaccataacatcaatagaaca 215  Q
    ||| |||| | ||||||||| |||||    
T  17224129 ttagcaacaacaacatcaattgaaca 17224104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 10989406 - 10989507
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| |||||||||||| ||||||||||| ||||||||| || || ||||| |||||  |||||||||| | |||||||||||| |||||    
T  10989406 ttctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactc 10989505  T
Q  229 aa 230  Q
    ||    
T  10989506 aa 10989507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 15978043 - 15977975
Alignment:
Q  28 caattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattca 96  Q
    |||||||| ||||||||||||||| |||||| |||| | |||| |||||||||||||||||||||||||    
T  15978043 caattaacaacaaccacaacttataatcatgtattcaaccacaattcaacaacaacatgtcataattca 15977975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 248
Target Start/End: Original strand, 13274742 - 13274901
Alignment:
Q  91 aattcaccaatttc-acaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatca 188  Q
    |||||||||||||  || |||| ||||||||||   |||||||||||||||| |||||||| ||||||||| |||| |||| |||||| | |||||||||    
T  13274742 aattcaccaatttttaccaaactaccaacaacatctcatttctcaacaacaaaacatgaatcatgcataccaaagccatgaatcatcatcaacaacatca 13274841  T
Q  189 attaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagca 248  Q
     ||| |||| | ||||||||| || || ||||| || | |||| |||| ||||| |||||    
T  13274842 cttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagca 13274901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 244
Target Start/End: Complemental strand, 13911281 - 13911166
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| |||||||||||| ||||||| ||| ||||||||| || || ||||| |||||  |||||||||||| ||||| |||||| | |||    
T  13911281 ttctcatcatcaatccatgaatatgcaaacccaagaaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctc 13911182  T
Q  229 aatccaaccacaactt 244  Q
    ||  |||| |||||||    
T  13911181 aaatcaacaacaactt 13911166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 1937297 - 1937252
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaa 138  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||    
T  1937297 ttcatcaatttcacaaaaccaccaacaataatccatttctcaacaa 1937252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 13572672 - 13572765
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||||| ||||||| |||||||||||| ||||||||||| |||||| || || || ||||| |||||  |||||||||| | ||||||| ||||    
T  13572672 ttctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattcataacatcatttgaacaagcatca 13572765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 26070545 - 26070436
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 199  Q
    |||||| |||| | |||||||||   |||||||||||||||  ||||||| |||||||||||||| |||| | |||| ||||||||||| ||| |||| |    
T  26070545 tttcaccaaactaacaacaacaacttatttctcaacaacaaatcatgaatcatgcatacccaagccatgaataatcatccacaacatcacttagcaacaa 26070446  T
Q  200 taacatcaat 209  Q
     |||||||||    
T  26070445 caacatcaat 26070436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 26094332 - 26094223
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 199  Q
    |||||| |||| | |||||||||   |||||||||||||||  ||||||| |||||||||||||| |||| | |||| ||||||||||| ||| |||| |    
T  26094332 tttcaccaaactaacaacaacaacttatttctcaacaacaaatcatgaatcatgcatacccaagccatgaataatcatccacaacatcacttagcaacaa 26094233  T
Q  200 taacatcaat 209  Q
     |||||||||    
T  26094232 caacatcaat 26094223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 2437463 - 2437546
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||| |||||||||||| || |||||||| ||||||||| || || ||||| |||||  |||||||||| | ||||||||||||    
T  2437463 caatccatgaatatgcaaactcaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatca 2437546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 208
Target Start/End: Original strand, 11287372 - 11287491
Alignment:
Q  91 aattcaccaattt-cacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatca 188  Q
    ||||||||||||| ||| |||||||||||||||   ||||||||||||||||  ||||||| ||||| |||||||| |||| | |||| | ||||||| |    
T  11287372 aattcaccaattttcaccaaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatga 11287471  T
Q  189 attaacaaccataacatcaa 208  Q
     ||| |||| | ||||||||    
T  11287472 cttagcaacaacaacatcaa 11287491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 248
Target Start/End: Complemental strand, 16570262 - 16570139
Alignment:
Q  126 catttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcata 224  Q
    ||||||||||||||||  ||||||| |||||||||||||| |||| | |||| |||| |||||| ||| |||| | ||||||||| || || ||| | ||    
T  16570262 catttctcaacaacaaatcatgaatcatgcatacccaagccatgaattatcatccacgacatcacttagcaacaacaacatcaattgatcatgaaactta 16570163  T
Q  225 actcaatccaaccacaacttagca 248  Q
     |||||| |||| ||||| |||||    
T  16570162 tctcaattcaacaacaacatagca 16570139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 248
Target Start/End: Original strand, 16595400 - 16595523
Alignment:
Q  126 catttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcata 224  Q
    ||||||||||||||||  ||||||| |||||||||||||| |||| | |||| |||| |||||| ||| |||| | ||||||||| || || ||| | ||    
T  16595400 catttctcaacaacaaatcatgaatcatgcatacccaagccatgaattatcatccacgacatcacttagcaacaacaacatcaattgatcatgaaactta 16595499  T
Q  225 actcaatccaaccacaacttagca 248  Q
     |||||| |||| ||||| |||||    
T  16595500 tctcaattcaacaacaacatagca 16595523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 15441789 - 15441711
Alignment:
Q  11 aatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtca 89  Q
    ||||||||  ||||||||||| |||||||| || ||| ||| ||||| || ||||||| | ||||||||||||||||||    
T  15441789 aatgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtca 15441711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 30262354 - 30262276
Alignment:
Q  11 aatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtca 89  Q
    ||||||||  ||||||||||| |||||||| || ||| ||| ||||| || ||||||| | ||||||||||||||||||    
T  30262354 aatgagatcaacatcatcaatcaaccacaatcataacatataatcatacactccatcataattcaacaacaacatgtca 30262276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 126392 - 126445
Alignment:
Q  112 caccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagc 164  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||| ||||||||    
T  126392 caccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagc 126445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 248
Target Start/End: Complemental strand, 12248395 - 12248254
Alignment:
Q  108 aaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatc 206  Q
    |||||||||||||||   ||||||||||||||||  ||||||| |||||||||||||  |||  | |||| ||||||||||| ||| |||| | ||||||    
T  12248395 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcatacccaagtcatgcattatcatccacaacatcacttagcaacaacaacatc 12248296  T
Q  207 aatagaacaagaatcataactcaatccaaccacaacttagca 248  Q
     || || || ||||| || | |||| |||| ||||| |||||    
T  12248295 cattgatcatgaatcttatcacaattcaacaacaacatagca 12248254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 18151547 - 18151494
Alignment:
Q  28 caattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaaca 81  Q
    |||| ||||||||||||||||||| |||||| |||| |||||| ||||||||||    
T  18151547 caatcaaccacaaccacaacttataatcatgtattcaatcacaattcaacaaca 18151494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 49047966 - 49047813
Alignment:
Q  91 aattcaccaatttc-acaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatca 188  Q
    |||||||||||||  || |||| ||||||||||   | ||||||||||||||  ||||||| |||||||||||||| |||| | |||| | |||||||||    
T  49047966 aattcaccaatttttaccaaactaccaacaacatctcgtttctcaacaacaaatcatgaatcatgcatacccaagccatgaattatcagcaacaacatca 49047867  T
Q  189 attaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaac 242  Q
     ||| |||| | ||||||||| || || ||||| || | |||| |||| |||||    
T  49047866 cttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaac 49047813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 251
Target Start/End: Complemental strand, 296233 - 296111
Alignment:
Q  127 atttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataac 226  Q
    |||| |||||| |||| |||||||| |||||||||| || | ||||||||||   |||||||||||| | | | ||||||||| ||||| |||||| |||    
T  296233 atttttcaacatcaatccatgaataagcatacccaatcagtaattcatcaac---aacatcaattaatagcaacaacatcaattgaacatgaatcacaac 296137  T
Q  227 tcaatccaacca-caacttagcaaaa 251  Q
     |||| ||| || ||| |||||||||    
T  296136 acaattcaaacatcaatttagcaaaa 296111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 142
Target Start/End: Complemental strand, 7284341 - 7284299
Alignment:
Q  100 atttcacaaaaccaccaacaacaatccatttctcaacaacaat 142  Q
    |||| |||||||||||||||||||  |||||||||||||||||    
T  7284341 atttaacaaaaccaccaacaacaactcatttctcaacaacaat 7284299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 122
Target Start/End: Original strand, 371048 - 371077
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaaca 122  Q
    ||||||||||||||||||||||||||||||    
T  371048 ttcaccaatttcacaaaaccaccaacaaca 371077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 122
Target Start/End: Complemental strand, 14251194 - 14251165
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaaca 122  Q
    ||||||||||||||||||||||||||||||    
T  14251194 ttcaccaatttcacaaaaccaccaacaaca 14251165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 15951087 - 15951046
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctca 134  Q
    ||||||||||||| ||||||||||||||||||  ||||||||    
T  15951087 ttcaccaatttcagaaaaccaccaacaacaatttatttctca 15951046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 222
Target Start/End: Complemental strand, 25292597 - 25292512
Alignment:
Q  137 aacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||||| |||||||||||| ||||||||||| |||||| |  || || ||||| |||||  |||||||||| | ||||||| ||||    
T  25292597 aacaatccatgaatatgcaaacccaagcaattattcattagtcataatatcaaataacattcataacatcatttgaacaagcatca 25292512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 186
Target Start/End: Complemental strand, 15822722 - 15822626
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacat 186  Q
    ||||||| |||||||| ||| |||||||||||   ||||||||||| ||||  ||||||| ||||| |||||||| |||| | |||| | |||||||    
T  15822722 aattcacaaatttcaccaaaacaccaacaacatctcatttctcaaccacaaaccatgaatcatgcaaacccaagccatgaatgatcatcaacaacat 15822626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 186
Target Start/End: Original strand, 35094773 - 35094869
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacat 186  Q
    |||||| || |||||| ||| |||||||||||   ||||||||||||||||  || ||| |||||| |||||||| |||||| |||| | |||||||    
T  35094773 aattcatcattttcaccaaaacaccaacaacatctcatttctcaacaacaaatcaagaattatgcaaacccaagccatgatttatcatcaacaacat 35094869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 4818 - 4940
Alignment:
Q  9 gcaatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatttcacaa 108  Q
    ||||||||||   ||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||   ||||||||||||||||||||||||||||    
T  4818 gcaatgagattatcatcaacaattaaccacaaccacaacttataatcatgcattccatcatatttcaac---aacatgtcataattcaccaatttcacaa 4914  T
Q  109 aaccaccaacaacaatccatttctca 134  Q
    ||||||||||||||||||||||||||    
T  4915 aaccaccaacaacaatccatttctca 4940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 34718 - 34605
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaa-tagaacaagaatcataactcaatccaacc 237  Q
    |||| |||||||||||||||||||| | |||||||||||| |||||||||| ||||||| |||||||||| || |||| |||||||| |||||| ||||     
T  34718 caatccatgaatatgcatacccaagtagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaattcaaca 34619  T
Q  238 acaacttagcaaaa 251  Q
    ||||||||||||||    
T  34618 acaacttagcaaaa 34605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 88; Significance: 2e-42; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 251
Target Start/End: Complemental strand, 123460 - 123309
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 199  Q
    |||||| ||| ||||||||||||| ||  |||||| |  |||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  123460 tttcaccaaaacaccaacaacaattcaaattctcatcttcaattcatgaatatgcatacccaagccattattcatcaaccacaacatcaattaacaacca 123361  T
Q  200 taacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||||||| ||||||||||||||||| |||| ||| ||||||||||||||    
T  123360 taacatcaattgaacaagaatcataacttaatctaacaacaacttagcaaaa 123309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 186
Target Start/End: Complemental strand, 255105 - 255009
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacat 186  Q
    ||||||| |||||||| ||| |||||||||||   ||||||||||||||||  ||||||| ||||| || ||||| |||| | |||| | |||||||    
T  255105 aattcacaaatttcacgaaaacaccaacaacatctcatttctcaacaacaaaccatgaatcatgcaaactcaagccatgaattatcatcaacaacat 255009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 186
Target Start/End: Complemental strand, 261711 - 261615
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacat 186  Q
    ||||||| |||||||| ||| |||||||||||   ||||||||||||||||  ||||||| ||||| || ||||| |||| | |||| | |||||||    
T  261711 aattcacaaatttcacgaaaacaccaacaacatctcatttctcaacaacaaaccatgaatcatgcaaactcaagccatgaattatcatcaacaacat 261615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 3e-41; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 91 - 251
Target Start/End: Original strand, 23153404 - 23153565
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    ||||||| |||||||| ||| ||||||||||||| ||  |||||| |   ||| |||||||||| ||||||||| |||||||||||||||||||||||||    
T  23153404 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatccttaattcatgaatatgtatacccaagtaatgattcatcaaccacaacatcaa 23153503  T
Q  190 ttaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||| |||||| |||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  23153504 ttaacagccataatatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaa 23153565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 248
Target Start/End: Complemental strand, 14626375 - 14626266
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||| | |||||   ||| |    
T  14626375 caattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatctcaagttaacaa 14626276  T
Q  239 caacttagca 248  Q
    ||||||||||    
T  14626275 caacttagca 14626266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 1657999 - 1657912
Alignment:
Q  144 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaat 231  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  1657999 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcaactgaacaagaatcataactcaat 1657912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 18381974 - 18381849
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    |||||||||||||||||||||||||||||||||  ||||||||| ||||||  |||||| |||| |||||||||| |||| |||||||| |||||||||     
T  18381974 aattcaccaatttcacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcac 18381875  T
Q  190 ttaacaaccataacatcaatagaaca 215  Q
    ||| |||| | ||||||||| |||||    
T  18381874 ttagcaacaacaacatcaattgaaca 18381849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 1650350 - 1650238
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||||||||||||||| |||||||||||| |||||||||| ||||||| ||||||||||| || ||||||||| | |||||   |||||    
T  1650350 caattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaattaacca 1650251  T
Q  239 caacttagcaaaa 251  Q
     ||||||||||||    
T  1650250 taacttagcaaaa 1650238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 215
Target Start/End: Complemental strand, 35009735 - 35009620
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 199  Q
    |||||| ||| ||||||||| ||| ||  |||||| || |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  35009735 tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaa 35009636  T
Q  200 taacatcaatagaaca 215  Q
     ||||||||| |||||    
T  35009635 caacatcaattgaaca 35009620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 15862484 - 15862570
Alignment:
Q  144 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaat 231  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| || | ||||||| ||| |||||||||||||||||||||    
T  15862484 catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattatcagcaataacataaat-gaacaagaatcataactcaat 15862570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 15889914 - 15889840
Alignment:
Q  22 catcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattca 96  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||    
T  15889914 catcaacaatcaaccacaaccacaacttataatcatgcattccatcacaattcatcaacaacatgtcataattca 15889840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 19983588 - 19983516
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagc 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||| ||||||||    
T  19983588 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaaaccatgaatcatgcaaacccaagc 19983516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 35015454 - 35015382
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagc 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||| ||||||||    
T  35015454 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagc 35015382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 25175559 - 25175660
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| |||||||||||||||||||||||| ||||||||| || || ||||| |||||  |||||||||| | |||||||||||| |||||    
T  25175559 ttctcatcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactc 25175658  T
Q  229 aa 230  Q
    ||    
T  25175659 aa 25175660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 25640757 - 25640683
Alignment:
Q  28 caattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    |||| ||||||||| ||||||||| |||||||||||||||| | |||||||||||||||||| |||||| |||||    
T  25640757 caatcaaccacaacaacaacttataatcatgcattccatcaaaattcaacaacaacatgtcacaattcatcaatt 25640683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 230
Target Start/End: Complemental strand, 27654224 - 27654138
Alignment:
Q  144 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaa 230  Q
    |||||||||||||||||||||||| ||||||||| || || ||||| |||||  |||||||||| | |||||||||||| |||||||    
T  27654224 catgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcattggaacaagaatcacaactcaa 27654138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 15005099 - 15005034
Alignment:
Q  37 acaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||||||||||||||||| |||||    
T  15005099 acaaccacaacttataatcattcattctatcacaattcaacaacaacatgtcataattcatcaatt 15005034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 22585754 - 22585681
Alignment:
Q  22 catcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattc 95  Q
    ||||| |||| ||| | ||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  22585754 catcaacaatcaactataaccacaacttataatcatgcattgcatcacaattcaacaacaacatgtcataattc 22585681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 22590585 - 22590512
Alignment:
Q  22 catcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattc 95  Q
    ||||| |||| ||| | ||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  22590585 catcaacaatcaactataaccacaacttataatcatgcattgcatcacaattcaacaacaacatgtcataattc 22590512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 27740844 - 27740956
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| ||||||||||||||||||| | |||||||||| || |||||||||  ||| | | |  |||||||| ||||| |||||||| |||||| |||| |    
T  27740844 caattcatgaatatgcatacccaaaccatgattcatccacaacaacatcagataatagcaaccacatcaattgaacatgaatcatatctcaattcaacaa 27740943  T
Q  239 caacttagcaaaa 251  Q
    | |||||||||||    
T  27740944 cgacttagcaaaa 27740956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 248
Target Start/End: Original strand, 21623124 - 21623282
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    ||||||||||||| || |||| |||||||||||  ||||| ||| | ||||  ||||||| ||| |||||||||| |||| |||| |||  ||||||||     
T  21623124 aattcaccaattttaccaaactaccaacaacaactcatttttcatccacaaatcatgaattatgaatacccaagccatgactcattaacatcaacatcac 21623223  T
Q  190 ttaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagca 248  Q
    ||| |||| | ||||||||||||||| || || || | |||| |||| ||||| |||||    
T  21623224 ttagcaacaacaacatcaatagaacatgattcttaccacaattcaacaacaacatagca 21623282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 16826010 - 16825909
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| |||||||||||||| | ||||||| ||||||||| || || ||||  |||||  |||||||||| | |||||||||||| |||||    
T  16826010 ttctcatcatcaatccatgaatatgcataacaaagcaattattcatcaatcataatatcagataacattcataacatcatttgaacaagaatcacaactc 16825911  T
Q  229 aa 230  Q
    ||    
T  16825910 aa 16825909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 191
Target Start/End: Original strand, 18583299 - 18583393
Alignment:
Q  100 atttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatga---ttcatcaaccacaacatcaatt 191  Q
    |||| |||||||||||||||||||  ||||||||||||||||| ||||||| ||||| |||||||| ||||    |||||||| ||||||||||||    
T  18583299 attttacaaaaccaccaacaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaacaacaacatcaatt 18583393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 191
Target Start/End: Original strand, 29665887 - 29665950
Alignment:
Q  128 tttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaatt 191  Q
    ||||||| || |||| ||||||||||||||||||||  |||||||| | || ||||||||||||    
T  29665887 tttctcatcaccaatccatgaatatgcatacccaagtcatgattcacccacaacaacatcaatt 29665950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 16556432 - 16556394
Alignment:
Q  96 accaatttcacaaaaccaccaacaacaatccatttctca 134  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  16556432 accaatttcacaaaaccaccaacaacaatttatttctca 16556394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 16632988 - 16632950
Alignment:
Q  96 accaatttcacaaaaccaccaacaacaatccatttctca 134  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  16632988 accaatttcacaaaaccaccaacaacaatttatttctca 16632950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 22226034 - 22225993
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctca 134  Q
    |||||||||||||||||||||||||||| |||  ||||||||    
T  22226034 ttcaccaatttcacaaaaccaccaacaagaatttatttctca 22225993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 17375121 - 17375053
Alignment:
Q  28 caattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattca 96  Q
    |||| ||||| |||||||| |||| |||||| |||| ||||||  |||||||||||||| |||| ||||    
T  17375121 caatcaaccataaccacaaattataatcatgtattcaatcacaaatcaacaacaacatgacatagttca 17375053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 112 - 251
Target Start/End: Complemental strand, 5345 - 5206
Alignment:
Q  112 caccaacaacaatccatttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatag 211  Q
    ||||||||||| || | |||||| |  |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |    
T  5345 caccaacaacattcaaattctcatcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattg 5246  T
Q  212 aacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||||||||||||||| || ||| ||||||| ||||||    
T  5245 aacaagaatcataactcattctaacaacaactttgcaaaa 5206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 101 - 251
Target Start/End: Original strand, 19173 - 19324
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 199  Q
    |||||| ||| ||||||||| ||| ||  |||||| || |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| | |    
T  19173 tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaa 19272  T
Q  200 taacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||||||| ||||| ||||||||||||||| |||| ||||||||||||||    
T  19273 taacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaa 19324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 101 - 251
Target Start/End: Original strand, 21257 - 21408
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 199  Q
    |||||| ||| ||||||||| ||| ||  |||||| || |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| | |    
T  21257 tttcaccaaaacaccaacaataattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaa 21356  T
Q  200 taacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||||||| ||||| ||||||||||||||| |||| ||||||||||||||    
T  21357 taacatcaattgaacaggaatcataactcaattcaacaacaacttagcaaaa 21408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 84; Significance: 5e-40; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 112 - 251
Target Start/End: Complemental strand, 26699 - 26560
Alignment:
Q  112 caccaacaacaatccatttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatag 211  Q
    ||||||||||| || | |||||| |  |||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |    
T  26699 caccaacaacactcaaattctcatcctcaattcatcaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattg 26600  T
Q  212 aacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||||||||||||||| || ||| ||||||||||||||    
T  26599 aacaagaatcataactcattctaacaacaacttagcaaaa 26560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 8444 - 8358
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaaca 215  Q
    |||||| || |||| |||| |||||||||||||||| ||||||||| ||| |||||||||||||||||| | ||||||||| |||||    
T  8444 ttctcatcatcaattcatgtatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaaca 8358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 7319 - 7191
Alignment:
Q  88 cataattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacat 186  Q
    |||||||||||||||| ||||||||| ||   ||||  ||||||||| ||||||| |||||| |||| | || ||||| |||| |||||||| |||| ||    
T  7319 cataattcaccaattttacaaaaccatcattcacaactcatttctcatcaacaattcatgaattatgaacactcaagccatgaatcatcaacaacaatat 7220  T
Q  187 caattaacaaccataacatcaatagaaca 215  Q
    || ||| || | | ||||||||| |||||    
T  7219 cacttagcagcaacaacatcaattgaaca 7191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 101 - 251
Target Start/End: Original strand, 148688 - 148839
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 199  Q
    |||||| ||| ||||||||||||| ||  |||||| || |||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  148688 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatacatacccaagcaatgattcatcaaccacaacttcaattaacaacca 148787  T
Q  200 taacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||||||| |||||||||||| | |||||   ||| ||||||||||||||    
T  148788 taacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaa 148839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 8855 - 8967
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||| |||||||||||||||||||||||| |||||||||||||| | | ||||||||||| |||||  ||||||| |||||| |||| |    
T  8855 caattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaatagcaataacatcaattgaacattaatcatatctcaattcaacaa 8954  T
Q  239 caacttagcaaaa 251  Q
    |||||||||||||    
T  8955 caacttagcaaaa 8967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 251
Target Start/End: Original strand, 1081 - 1242
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    |||||| || |||||| ||| ||||||||||||| ||  |||||| || |||| |||||||||||| ||||||||||| ||||||||||||||| |||||    
T  1081 aattcatcattttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcacacccaagcaattattcatcaaccacaatatcaa 1180  T
Q  190 ttaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    |||||||||||||||||||| |||||||||||| | |||||   ||| ||||||||||||||    
T  1181 ttaacaaccataacatcaattgaacaagaatcaaatctcaaattaacaacaacttagcaaaa 1242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 3839 - 3727
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| ||| |||||||||||||||||||| |||| |||| ||||||||||||||||| ||||||||||||| |||||||||||| | |||||   ||| |    
T  3839 caatccatcaatatgcatacccaagcaattattcctcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaa 3740  T
Q  239 caacttagcaaaa 251  Q
    |||||||||||||    
T  3739 caacttagcaaaa 3727  T

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Target: scaffold0106 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 251
Target Start/End: Original strand, 41693 - 41847
Alignment:
Q  98 caatttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaa 196  Q
    ||||||||| ||| ||||||||||||| ||  |||| |  | |||| ||||||||||||||||||| ||||||||||||| | |||||| |||||||||     
T  41693 caatttcaccaaaacaccaacaacaattcaaattctaataatcaattcatgaatatgcatacccaaccaatgattcatcatctacaacaacaattaacag 41792  T
Q  197 ccataacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
    ||||| ||||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  41793 ccatagcatcaattgaacaagaatcataactcaatctaacaacaacttagcaaaa 41847  T

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Target: scaffold0498 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 8874 - 8996
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| |||||||||||| | |||    
T  8874 ttctcatcatcaatacatgaatatgcatacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctc 8973  T
Q  229 aatccaaccacaacttagcaaaa 251  Q
    ||   ||| |||||||| |||||    
T  8974 aaattaacaacaacttaacaaaa 8996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 12081 - 11947
Alignment:
Q  9 gcaatgagatggacatcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaa-tttcaca 107  Q
    ||||||||||   ||||| ||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||     
T  12081 gcaatgagattatcatcaacaattaaacacaaccacaacttataatcatgcattccatcatatttcaacaacaacatgtcataattcaccaattttcacc 11982  T
Q  108 aaaccaccaacaacaatccatttctcaacaacaat 142  Q
    ||| |||||| ||||   |||||||||||| ||||    
T  11981 aaaacaccaaaaacatctcatttctcaacaccaat 11947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 146 - 251
Target Start/End: Complemental strand, 784 - 679
Alignment:
Q  146 tgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaactta 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||  |||||||||||||||| |||| |||   ||||||    
T  784 tgaatatgcatacccaagcaatgattcatcaaccacaacatcaattagcagccataacatcaattaaacaagaatcataacttaatctaacagtaactta 685  T
Q  246 gcaaaa 251  Q
    ||||||    
T  684 gcaaaa 679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 37371 - 37219
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    ||||||| |||||||| ||| ||||||||||||| ||  |||||| || |||| |||||||||| |||||||||||||||||||||||| |||||||| |    
T  37371 aattcacaaatttcaccaaaacaccaacaacaattcaaattctcatcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatcta 37272  T
Q  190 ttaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaac 242  Q
    ||| || | | ||||||||| | |||||||||||| ||||||||||| |||||    
T  37271 ttagcatcaacaacatcaattgcacaagaatcatagctcaatccaactacaac 37219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 41267 - 41315
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaa 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41267 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaa 41315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 9594 - 9482
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || ||||||||| | |||||   ||| |    
T  9594 caattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaattaacaa 9495  T
Q  239 caacttagcaaaa 251  Q
     ||||||||||||    
T  9494 taacttagcaaaa 9482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 16492 - 16380
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || ||||||||| | |||||   ||| |    
T  16492 caattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaattaacaa 16393  T
Q  239 caacttagcaaaa 251  Q
     ||||||||||||    
T  16392 taacttagcaaaa 16380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 231
Target Start/End: Complemental strand, 128464 - 128333
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacca 199  Q
    |||||| ||| ||||||||||||| ||  |||||| || |||| ||||||||||||||||||| |||| ||||||||| ||||||||| ||||||| |||    
T  128464 tttcaccaaaacaccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaatcaattattcatcaatcacaacatccattaacatcca 128365  T
Q  200 taacatcaatagaacaagaatcataactcaat 231  Q
    |||||||||| |||||||||||| | ||||||    
T  128364 taacatcaattgaacaagaatcaaatctcaat 128333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 244
Target Start/End: Complemental strand, 31917 - 31817
Alignment:
Q  144 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaact 243  Q
    |||||||||||| ||||||||||| ||||||||| || || || || |||||  |||||||||||| ||||| |||||| | |||||  |||| ||||||    
T  31917 catgaatatgcaaacccaagcaattattcatcaatcataatattaaataacattcataacatcaattgaacatgaatcacatctcaaatcaacaacaact 31818  T
Q  244 t 244  Q
    |    
T  31817 t 31817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 2968 - 3081
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaa-tagaacaagaatcataactcaatccaacc 237  Q
    |||| ||||||||||||||| |||||| |||||||||||| |||||||||| ||||||| |||||||||| || |||| |||||||| |||||| ||||     
T  2968 caattcatgaatatgcatacacaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaattcaaca 3067  T
Q  238 acaacttagcaaaa 251  Q
    ||||||||||||||    
T  3068 acaacttagcaaaa 3081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 62; Significance: 7e-27; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 22255 - 22186
Alignment:
Q  33 aaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22255 aaccacaaccacaacttataatcatgcattccatcatatttcaacaacaacatgtcataattcaccaatt 22186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 132541 - 132422
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    ||||||| |||||||| ||| ||||||||||| | ||||||||||||||||  ||||||| ||||| |||||||| |||| | |||| | ||||||| |     
T  132541 aattcacaaatttcaccaaaacaccaacaacatttcatttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgac 132442  T
Q  190 ttaacaaccataacatcaat 209  Q
    |||||||| | |||||||||    
T  132441 ttaacaacaacaacatcaat 132422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 209
Target Start/End: Original strand, 11660 - 11762
Alignment:
Q  108 aaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatc 206  Q
    |||||||||||||||   ||||||||||||||||  ||||||| ||||||| |||||| |||| | |||| | ||||| ||| ||| |||| | ||||||    
T  11660 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcataaccaagccatgaattatcatcaacaacgtcacttagcaacaacaacatc 11759  T
Q  207 aat 209  Q
    |||    
T  11760 aat 11762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 1089 - 1017
Alignment:
Q  22 catcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataatt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  1089 catcaacaattaaccacaaccacaacttataatcatgcattccatcatatttcaacaacaacatgtcataatt 1017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 6617 - 6715
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatca 188  Q
    |||||||| | || |||||||||||||||||||  ||||||||| ||||||  |||||| ||||   |||||||| |||| |||||||| | |||||||    
T  6617 aattcacccagtttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaccacccaagccatgaatcatcaacaaaaacatca 6715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 45876 - 45804
Alignment:
Q  22 catcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataatt 94  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  45876 catcaacaattaaccacaaccacaacttataatcatgcattccatcatatttcaacaacaacatgtcataatt 45804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 107753 - 107865
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| |||||||||||| | |||||   ||| |    
T  107753 caatccatgaatatgcaaacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaacaa 107852  T
Q  239 caacttagcaaaa 251  Q
    ||||||| |||||    
T  107853 caacttatcaaaa 107865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 64784 - 64691
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||||| ||||||| |||||||||||| ||||||||||| |||||| || || || ||||| |||||  |||||||||| | ||||||| ||||    
T  64784 ttctcatcaacaatccatgaatatgcaaacccaagcaattattcattaatcataatatcaaataacattcataacatcatttgaacaagcatca 64691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 159 - 233
Alignment:
Q  28 caattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  159 caattaatcacaaccacaacttataatcatgcattccatcatatttcaacaacaacatgtcataattcaacaatt 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 1703 - 1629
Alignment:
Q  28 caattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  1703 caattaatcacaaccacaacttataatcatgcattccatcatatttcaacaacaacatgtcataattcatcaatt 1629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 48183 - 48305
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| |||||||||||||||||| ||||| ||||||||| ||||||||||||||||| | ||||||||||| |||||||||||| | |||    
T  48183 ttctcatcatcaatccatgaatatgcatacccaggcaattattcatcaatcacaacatcaattaacatctataacatcaattgaacaagaatcaaatctc 48282  T
Q  229 aatccaaccacaacttagcaaaa 251  Q
    ||   ||| |||||||| |||||    
T  48283 aaattaacaacaacttaacaaaa 48305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 41626 - 41730
Alignment:
Q  112 caccaacaacaatccat-ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaata 210  Q
    ||||||||||||| ||  |||||| || |||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||     
T  41626 caccaacaacaattcaaattctcatcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatcaatt 41725  T
Q  211 gaaca 215  Q
    |||||    
T  41726 gaaca 41730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 221
Target Start/End: Complemental strand, 77138 - 77007
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    |||||||||||||||||||||||||||||||||  ||||||||| ||||||  |||||| |||| |||||||||| |||| |||||||  |||| ||||     
T  77138 aattcaccaatttcacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaataacaatatcac 77039  T
Q  190 ttaacaaccataacatcaatagaacaagaatc 221  Q
    ||| |||| | ||||||||| ||||| |||||    
T  77038 ttagcaacaacaacatcaattgaacatgaatc 77007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 12111 - 12213
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactc 228  Q
    |||||| || |||| |||||||||||||||||||||||| |||||| || || ||||||||||||||  |||||||||||| |||||||||||| | |||    
T  12111 ttctcatcatcaatccatgaatatgcatacccaagcaattattcatgaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctc 12210  T
Q  229 aat 231  Q
    |||    
T  12211 aat 12213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 6320 - 6209
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||||||||||||||||| ||||||||| || ||||  |||||||| ||||||||||| | |||||||||||| | ||||||  ||| |    
T  6320 caatccatgaatatgcatacccaagcaattattcatcaatcataacaaaaattaacatccataacatcacttgaacaagaatcaaatctcaat-taacaa 6222  T
Q  239 caacttagcaaaa 251  Q
    |||||||||||||    
T  6221 caacttagcaaaa 6209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 3728 - 3840
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||||| ||||||| ||| ||||||||| || ||||||||||||||  |||||||||||| |||||||||||| | |||||   ||| |    
T  3728 caatccatgaatatgcaaacccaagtaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaattaacaa 3827  T
Q  239 caacttagcaaaa 251  Q
    |||||||||||||    
T  3828 caacttagcaaaa 3840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 1212 - 1101
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||||||||||||||||| ||||||||| || ||||| |||||||| ||||||||||| | |||||||||| | | ||||||  ||| |    
T  1212 caatccatgaatatgcatacccaagcaattattcatcaatcataacataaattaacatccataacatcacttgaacaagaataaaatctcaat-taacaa 1114  T
Q  239 caacttagcaaaa 251  Q
    |||||||||||||    
T  1113 caacttagcaaaa 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 162476 - 162404
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagc 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||| ||||||||    
T  162476 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagc 162404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 207
Target Start/End: Complemental strand, 116804 - 116687
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| ||||||  |||||| |||| | |||||||| |||| |||||||| |||| ||||     
T  116804 aattcaccaattttacaaaaccaccaacaacaatccatttttcatcaacaaatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcac 116705  T
Q  190 ttaacaaccataacatca 207  Q
    ||| |||| | |||||||    
T  116704 ttagcaacaacaacatca 116687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 166554 - 166482
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagc 164  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||| ||||||||    
T  166554 ttcaccaatttcacaaaaccaccaacaacaatccatttttcaacaacaaatcatgaatcatgcaaacccaagc 166482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 6380 - 6309
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaag 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||| |||||||    
T  6380 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaag 6309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 48520 - 48603
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||| |||||||||||| ||||||||||| ||||||||| || |||||||||||||| ||||||||||||  ||||||||||||    
T  48520 caatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacatccataacatcaagtgaacaagaatca 48603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 35435 - 35559
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    ||||||||||||| |||||||||||||| ||||  ||||||||| ||||||  |||||| |||| |||||||||| |||| |||||||| |||||||||     
T  35435 aattcaccaattttacaaaaccaccaac-acaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcac 35533  T
Q  190 ttaacaaccataacatcaatagaaca 215  Q
    ||| |||| | ||||||||| |||||    
T  35534 ttagcaacaaaaacatcaattgaaca 35559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 31577 - 31529
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaa 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31577 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaa 31529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 13512 - 13588
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaaca 215  Q
    |||| ||||||||||||||||||||  ||||||||||||| |||||||||||||||||| | ||||||||| |||||    
T  13512 caattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaaca 13588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 5460 - 5349
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcataactcaatccaacca 238  Q
    |||| |||||||||||| ||||||||||| |||||| || |||||||||||||||||  |||||||||||| |||||||||||| | |||||   ||| |    
T  5460 caatccatgaatatgca-acccaagcaattattcattaatcacaacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaattaacaa 5362  T
Q  239 caacttagcaaaa 251  Q
    ||||| |||||||    
T  5361 caactcagcaaaa 5349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 251
Target Start/End: Original strand, 109545 - 109707
Alignment:
Q  91 aattcaccaatttc-acaaaaccaccaacaacaatccatttctcaacaacaatacatgaata-tgcatacccaagcaatgattcatcaaccacaacatca 188  Q
    |||||||||||||  || |||| ||||||||||   ||||||||| ||||||  |||||||  ||||||||||||| |||| | |||| | |||||||||    
T  109545 aattcaccaatttttaccaaactaccaacaacatctcatttctcatcaacaaatcatgaatcgtgcatacccaagccatgaattatcatcaacaacatca 109644  T
Q  189 attaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagcaaaa 251  Q
     ||| |||| | ||||||||  || || ||||| || | |||| |||| ||||| ||||||||    
T  109645 cttagcaacaacaacatcaactgatcatgaatcttatcacaattcaacaacaacatagcaaaa 109707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 220
Target Start/End: Complemental strand, 103192 - 103083
Alignment:
Q  112 caccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaata 210  Q
    ||||||||||||  ||||| ||| ||||||| ||||||| ||||| |||||| | |||| | |||| | ||||||||| |||  ||| |||||||||||     
T  103192 caccaacaacaactcatttatcaccaacaattcatgaattatgcacacccaaaccatgaattatcatcaacaacatcacttagaaacaataacatcaatt 103093  T
Q  211 gaacaagaat 220  Q
    ||||| ||||    
T  103092 gaacatgaat 103083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 4049 - 3969
Alignment:
Q  22 catcatcaattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    ||||| |||| || |||||||||||||||| || ||||||||||||||| ||||| ||||||||||| ||||||| |||||    
T  4049 catcaacaatcaagcacaaccacaacttataattatgcattccatcacaattcaataacaacatgtcgtaattcatcaatt 3969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1560 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1560
Description:

Target: scaffold1560; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 109 - 26
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||| |||||||||||| ||||||||||| ||||||||| || ||||||||||||||  ||||| |||| | ||||||||||||    
T  109 caatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataatatcatttgaacaagaatca 26  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 209
Target Start/End: Original strand, 31176 - 31286
Alignment:
Q  100 atttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaacc 198  Q
    |||| |||||||||||||||||||  ||||||||||||||||| ||||||| ||||| |||||||| |||| | |||| | ||||||| | ||| ||||     
T  31176 attttacaaaaccaccaacaacaactcatttctcaacaacaattcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaaca 31275  T
Q  199 ataacatcaat 209  Q
    | |||||||||    
T  31276 aaaacatcaat 31286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 208
Target Start/End: Original strand, 21477 - 21586
Alignment:
Q  100 atttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaacc 198  Q
    |||| |||||||||||||||||||  ||||||| ||||||||| ||||||| ||||| |||||||| |||| | |||| | ||||||| | ||| ||||     
T  21477 attttacaaaaccaccaacaacaactcatttcttaacaacaattcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaaca 21576  T
Q  199 ataacatcaa 208  Q
    | ||||||||    
T  21577 acaacatcaa 21586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 44311 - 44249
Alignment:
Q  33 aaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattc 95  Q
    |||| |||||||||||| | ||||||||| |||||||| ||||||||||||||||||||||||    
T  44311 aacctcaaccacaacttgtaatcatgcatcccatcacaattcaacaacaacatgtcataattc 44249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 5936 - 6010
Alignment:
Q  28 caattaaccacaaccacaacttatgatcatgcattccatcacatttcaacaacaacatgtcataattcaccaatt 102  Q
    |||| ||||||||||||||||||  ||||||||||| |||||| |||||| |||||||||||||| ||| |||||    
T  5936 caatcaaccacaaccacaacttacaatcatgcattcgatcacaattcaactacaacatgtcataaatcatcaatt 6010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 21356 - 21279
Alignment:
Q  144 catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatc 221  Q
    |||||||||||| || |||||||| ||||||||| || |||||||| |||||  |||||||||||| |||||||||||    
T  21356 catgaatatgcaaactcaagcaattattcatcaatcataacatcaaataacattcataacatcaattgaacaagaatc 21279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 14306 - 14224
Alignment:
Q  139 caatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatc 221  Q
    |||| |||||||||||| || |||||||| ||||||||| || ||||||||  ||||  |||||||| ||| |||||||||||    
T  14306 caatccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaacaacattcataacattaattgaacaagaatc 14224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 3186 - 3266
Alignment:
Q  112 caccaacaacaat-ccatttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaatt 191  Q
    ||||||||||||| ||| |||||  || |||| ||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  3186 caccaacaacaattccaattctcttcatcaattcatgaatatgcctacccaaacaatgattcatcaatcacaacatcaatt 3266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 42993 - 43086
Alignment:
Q  129 ttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatca 222  Q
    |||||| || |||| |||||||||||| ||||||||||| ||||||||| || || ||||| |||||  |||||||||| | ||||| ||||||    
T  42993 ttctcatcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcacttgaacacgaatca 43086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 39063 - 39104
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctca 134  Q
    ||||||||||||||||||||| ||||||||||  ||||||||    
T  39063 ttcaccaatttcacaaaaccatcaacaacaatttatttctca 39104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 747 - 700
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaa 141  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  747 ttcaccaatt-cacaaaaccaccaacaataatccatttctcaacaacaa 700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 215
Target Start/End: Original strand, 28501 - 28617
Alignment:
Q  100 atttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatcaattaacaacc 198  Q
    |||| |||||||||||||||||||  ||||||||| ||| ||  |||||| |||| | |||||||| |||| |||| ||| ||||||||| ||| ||||     
T  28501 attttacaaaaccaccaacaacaactcatttctcaccaataaatcatgaattatgaacacccaagccatgaatcattaacaacaacatcacttagcaaca 28600  T
Q  199 ataacatcaatagaaca 215  Q
    | ||||||||| |||||    
T  28601 acaacatcaattgaaca 28617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 186
Target Start/End: Original strand, 3265 - 3351
Alignment:
Q  100 atttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacat 186  Q
    |||| |||||||||||||||||||  ||||||||||||||||| ||||||| ||||| |||||||| |||| | |||| | |||||||    
T  3265 attttacaaaaccaccaacaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaacaacat 3351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 164
Target Start/End: Original strand, 159257 - 159332
Alignment:
Q  91 aattcaccaattt-cacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagc 164  Q
    ||||||||||||| ||| |||||||||||||||   ||||||||||||||||  ||||||| ||||||||||||||    
T  159257 aattcaccaattttcaccaaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcatacccaagc 159332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 209
Target Start/End: Original strand, 7807 - 7909
Alignment:
Q  108 aaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatc 206  Q
    |||| ||||||||||   ||||||||||||||||  ||||||| |||||||||||||| |||| | | || ||||||||||| ||| |||| | ||||||    
T  7807 aaactaccaacaacatctcatttctcaacaacaaatcatgaatcatgcatacccaagccatgaattaacatccacaacatcacttagcaacaacaacatc 7906  T
Q  207 aat 209  Q
    |||    
T  7907 aat 7909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 29122 - 29174
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaataca 145  Q
    ||||||||||||||||||||||||||||||||  || ||||| || |||||||    
T  29122 ttcaccaatttcacaaaaccaccaacaacaatttatatctcatcatcaataca 29174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 109754 - 109634
Alignment:
Q  91 aattcaccaattt-cacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatca 188  Q
    ||||||||||||| ||| |||||||||||||||   ||||||||||||||||  ||||||| |||||  ||||||| |||| | |||| | ||||||| |    
T  109754 aattcaccaattttcaccaaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaatcccaagccatgaattatcatcaacaacatga 109655  T
Q  189 attaacaaccataacatcaat 209  Q
     ||| |||| | |||||||||    
T  109654 cttagcaacaacaacatcaat 109634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 208
Target Start/End: Complemental strand, 118255 - 118136
Alignment:
Q  91 aattcaccaattt-cacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatca 188  Q
    ||||||||||||| ||| |||||||||||||||   ||||||||||||||||  ||||||| |||||  ||||||| |||| | |||| | ||||||| |    
T  118255 aattcaccaattttcaccaaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaccccaagccatgaattatcatcaacaacatga 118156  T
Q  189 attaacaaccataacatcaa 208  Q
     ||| |||| | ||||||||    
T  118155 cttagcaacaacaacatcaa 118136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 209
Target Start/End: Complemental strand, 5537 - 5418
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    ||||||||| |||||| ||| |||||||||||   ||||||||||||||||  ||||||| ||||| |||||| | |||| | |||| | ||||||| |     
T  5537 aattcaccattttcaccaaaacaccaacaacatctcatttctcaacaacaaaccatgaatcatgcaaacccaaaccatgaattatcatcaacaacatgac 5438  T
Q  190 ttaacaaccataacatcaat 209  Q
    ||| |||| | |||||||||    
T  5437 ttagcaacaacaacatcaat 5418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 9156 - 9054
Alignment:
Q  108 aaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatc 206  Q
    |||||||| ||||||   ||||||||||||||||  ||||||| ||||||||| |||| |||| | |||| | ||||||||| ||| |||| | ||||||    
T  9156 aaaccaccgacaacatctcatttctcaacaacaaatcatgaatcatgcatacctaagccatgaattatcatcaacaacatcacttagcaacaacaacatc 9057  T
Q  207 aat 209  Q
    |||    
T  9056 aat 9054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 208
Target Start/End: Original strand, 8942 - 9061
Alignment:
Q  91 aattcaccaattt-cacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatca 188  Q
    ||||||||||||| ||| |||||||||||||||   ||||||||||||||||  ||||||| | ||| |||||||| |||| | |||| | ||||||| |    
T  8942 aattcaccaattttcaccaaaccaccaacaacatctcatttctcaacaacaaatcatgaatcaagcaaacccaagccatgaattatcatcaacaacatga 9041  T
Q  189 attaacaaccataacatcaa 208  Q
     ||| |||| | ||||||||    
T  9042 cttagcaacaacaacatcaa 9061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 186
Target Start/End: Original strand, 24925 - 25010
Alignment:
Q  100 atttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacat 186  Q
    |||| |||||||||||||||||||  ||||||||||||||||| ||||||| ||||| |||||||| |||| | |||| | |||||||    
T  24925 attttacaaaaccaccaacaacaactcatttctcaacaacaat-catgaatcatgca-acccaagccatgaattatcatcaacaacat 25010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 248
Target Start/End: Original strand, 3310 - 3433
Alignment:
Q  126 catttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaatagaacaagaatcata 224  Q
    ||||||||||||||||  ||||||| |||||||||||||| |||| | | || ||||||||||| ||| ||||   ||||||||| || || ||||| ||    
T  3310 catttctcaacaacaaatcatgaatcatgcatacccaagccatgaattaacatccacaacatcacttagcaacatcaacatcaattgatcatgaatctta 3409  T
Q  225 actcaatccaaccacaacttagca 248  Q
     | |||| |||| ||||| |||||    
T  3410 tcacaattcaactacaacatagca 3433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 1347 - 1433
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacat 186  Q
    |||||| ||| |||||||||||   ||||||||||||||||  ||||||| ||||| |||||||| |||||| |||| | |||||||    
T  1347 tttcaccaaaacaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgatttatcatcaacaacat 1433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 123
Target Start/End: Original strand, 39606 - 39636
Alignment:
Q  93 ttcaccaatttcacaaaaccaccaacaacaa 123  Q
    |||||||||||||||||||||||||||||||    
T  39606 ttcaccaatttcacaaaaccaccaacaacaa 39636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 248
Target Start/End: Complemental strand, 34019 - 33861
Alignment:
Q  91 aattcaccaatttc-acaaaaccaccaacaacaatccatttctcaacaacaatacatgaatatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    |||||||||||||  || |||| ||||||||||   ||||||||||||||||  ||| |  |||||||||||||| |||| | || | | |||||||||     
T  34019 aattcaccaatttttaccaaactaccaacaacatctcatttctcaacaacaaatcataatcatgcatacccaagccatgaattattatcaacaacatcac 33920  T
Q  190 ttaacaaccataacatcaatagaacaagaatcataactcaatccaaccacaacttagca 248  Q
    ||| |||| | ||||||||| || || ||||| || | |||| |||| ||||| |||||    
T  33919 ttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagca 33861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 215
Target Start/End: Original strand, 265 - 390
Alignment:
Q  91 aattcaccaatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaa-tatgcatacccaagcaatgattcatcaaccacaacatcaa 189  Q
    |||||||| | || |||||||||||||||||||  ||||||||| ||||||  |||||| ||||   |||||||  |||| | |||||| | |||||||     
T  265 aattcacccagtttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgagcacccaaggcatgaataatcaacaaaaacatcac 364  T
Q  190 ttaacaaccataacatcaatagaaca 215  Q
    ||| |||| | ||||||||| |||||    
T  365 ttagcaacaacaacatcaattgaaca 390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 12809 - 12740
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatga 169  Q
    |||||| |||||| ||||||||||  |||||||||||||||   |||||| |||||||||||||| ||||    
T  12809 tttcaccaaaccaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatga 12740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 19190 - 19121
Alignment:
Q  101 tttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatga 169  Q
    |||||| |||||| ||||||||||  |||||||||||||||   |||||| |||||||||||||| ||||    
T  19190 tttcaccaaaccaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatga 19121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 186
Target Start/End: Complemental strand, 1105 - 1017
Alignment:
Q  99 aatttcacaaaaccaccaacaacaatccatttctcaacaacaatacatgaat-atgcatacccaagcaatgattcatcaaccacaacat 186  Q
    |||||||| ||| |||||||||||   ||||||||||||||||  ||||||| ||||| |||||||| |||| | |||| | |||||||    
T  1105 aatttcaccaaatcaccaacaacatctcatttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacat 1017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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