View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0166-INSERTION-4 (Length: 310)
Name: NF0166-INSERTION-4
Description: NF0166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0166-INSERTION-4 |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 7 - 297
Target Start/End: Complemental strand, 25008470 - 25008178
Alignment:
| Q |
7 |
acaaagacctgagtttgattcatattggcaagaaagggctaaggttgcaaaacaagagaataaagctgcttattttaaagatccttatgctatctctgga |
106 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25008470 |
acaaagacctgagtttgattcatattggcaagaaagggctaaggttgcaaaacaagagaataaagctgcttattttaaagatccttatgctatctctgga |
25008371 |
T |
|
| Q |
107 |
aactttactgcttctatttctgagtaagcaagcattttgctatttacatcttatcctatcatgtttataacacatttaa--tttcatarggtaaaaataa |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||| |
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| T |
25008370 |
aactttactgcttctatttctgagtaagcaagcattttgctatttacatcttatcctatcatatttataacacatttaatttttcataaggtaaaaatag |
25008271 |
T |
|
| Q |
205 |
tgcatgttttggtttgacataaaaatgatgcagtgttttattagcaagcttgtgagcattttgctatttaagatcttaccctatcatattctt |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25008270 |
tgcatgttttggtttgacataaaaatgatgcagtgttttattagcaagcttgtgagcattttgctatttaagatcttaccctatcatattctt |
25008178 |
T |
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