View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0169-INSERTION1 (Length: 293)

Name: NF0169-INSERTION1
Description: NF0169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0169-INSERTION1
NF0169-INSERTION1
[»] chr5 (46 HSPs)
chr5 (91-274)||(13707816-13708003)
chr5 (184-289)||(29430008-29430113)
chr5 (184-293)||(29430560-29430669)
chr5 (173-293)||(39742557-39742675)
chr5 (201-289)||(42099081-42099169)
chr5 (186-293)||(13707405-13707512)
chr5 (196-293)||(27532611-27532707)
chr5 (184-293)||(42098285-42098393)
chr5 (186-290)||(13665401-13665505)
chr5 (202-244)||(13838424-13838466)
chr5 (189-253)||(18512253-18512315)
chr5 (196-243)||(20509545-20509592)
chr5 (201-244)||(25983400-25983443)
chr5 (201-244)||(39743147-39743190)
chr5 (202-244)||(34682288-34682330)
chr5 (184-253)||(18512634-18512703)
chr5 (201-242)||(28876676-28876717)
chr5 (202-250)||(3603148-3603196)
chr5 (206-242)||(20421949-20421985)
chr5 (196-244)||(25890025-25890073)
chr5 (207-271)||(27531926-27531990)
chr5 (194-242)||(30711151-30711199)
chr5 (196-244)||(41065915-41065963)
chr5 (202-242)||(42912878-42912918)
chr5 (201-244)||(19037469-19037512)
chr5 (201-292)||(30966643-30966732)
chr5 (207-242)||(35564296-35564331)
chr5 (201-243)||(8046-8088)
chr5 (198-244)||(4204207-4204253)
chr5 (196-250)||(8679585-8679639)
chr5 (202-244)||(28388519-28388561)
chr5 (207-241)||(35926396-35926430)
chr5 (207-244)||(11346038-11346075)
chr5 (201-242)||(13837757-13837798)
chr5 (207-244)||(17966891-17966928)
chr5 (199-244)||(18538332-18538377)
chr5 (199-244)||(25497542-25497587)
chr5 (194-239)||(27659976-27660021)
chr5 (201-242)||(28238172-28238213)
chr5 (207-244)||(41201759-41201796)
chr5 (196-244)||(3891514-3891562)
chr5 (196-244)||(3892434-3892482)
chr5 (196-244)||(8680240-8680288)
chr5 (196-236)||(18563926-18563966)
chr5 (202-242)||(30705170-30705210)
chr5 (196-244)||(34122555-34122603)
[»] chr7 (53 HSPs)
chr7 (91-184)||(27919458-27919551)
chr7 (167-290)||(27919018-27919145)
chr7 (184-240)||(31323084-31323140)
chr7 (211-273)||(36805539-36805601)
chr7 (196-273)||(33018473-33018550)
chr7 (201-293)||(45350889-45350980)
chr7 (199-244)||(36781446-36781491)
chr7 (195-244)||(48901435-48901484)
chr7 (184-240)||(31324789-31324844)
chr7 (202-240)||(10225843-10225881)
chr7 (194-244)||(17840882-17840932)
chr7 (202-244)||(48590339-48590381)
chr7 (201-242)||(30791007-30791048)
chr7 (195-244)||(35840116-35840165)
chr7 (207-244)||(38265476-38265513)
chr7 (197-242)||(42795108-42795153)
chr7 (196-244)||(7100-7148)
chr7 (196-244)||(8041-8089)
chr7 (207-251)||(8522141-8522185)
chr7 (194-242)||(15070388-15070436)
chr7 (194-242)||(18105406-18105454)
chr7 (196-244)||(30468481-30468529)
chr7 (196-244)||(42583054-42583102)
chr7 (196-244)||(45791336-45791384)
chr7 (196-244)||(46907567-46907615)
chr7 (189-244)||(47750555-47750611)
chr7 (196-244)||(49140684-49140732)
chr7 (201-244)||(9367723-9367766)
chr7 (223-274)||(27919573-27919624)
chr7 (201-244)||(30355238-30355281)
chr7 (201-244)||(42499440-42499483)
chr7 (196-242)||(12210584-12210630)
chr7 (209-243)||(33603233-33603267)
chr7 (202-244)||(38555413-38555455)
chr7 (198-240)||(47060961-47061003)
chr7 (201-275)||(47776332-47776406)
chr7 (207-244)||(9494811-9494848)
chr7 (207-244)||(10098122-10098159)
chr7 (210-243)||(18219942-18219975)
chr7 (207-244)||(29112404-29112441)
chr7 (207-244)||(34742400-34742437)
chr7 (201-242)||(35606822-35606863)
chr7 (201-242)||(41884125-41884166)
chr7 (201-242)||(45767860-45767901)
chr7 (201-289)||(9491394-9491482)
chr7 (207-263)||(11629766-11629822)
chr7 (208-244)||(22640673-22640709)
chr7 (196-244)||(26833468-26833516)
chr7 (196-244)||(29097854-29097902)
chr7 (196-244)||(29113106-29113154)
chr7 (196-244)||(38266098-38266146)
chr7 (196-244)||(42794224-42794272)
chr7 (196-244)||(49141615-49141663)
[»] chr2 (67 HSPs)
chr2 (184-293)||(14456484-14456593)
chr2 (184-244)||(2983431-2983491)
chr2 (222-293)||(19694220-19694291)
chr2 (202-244)||(43618604-43618646)
chr2 (208-275)||(40055377-40055444)
chr2 (196-242)||(40055491-40055537)
chr2 (202-244)||(40221130-40221172)
chr2 (194-244)||(41183216-41183266)
chr2 (209-274)||(31567942-31568007)
chr2 (196-244)||(9088743-9088791)
chr2 (196-244)||(29600791-29600839)
chr2 (202-242)||(41565351-41565391)
chr2 (164-215)||(19694774-19694825)
chr2 (196-243)||(19846915-19846962)
chr2 (201-244)||(31974246-31974289)
chr2 (201-243)||(6638010-6638052)
chr2 (188-244)||(39489951-39490008)
chr2 (201-242)||(44100797-44100838)
chr2 (196-244)||(4014295-4014343)
chr2 (196-244)||(4015100-4015148)
chr2 (196-244)||(6233572-6233620)
chr2 (196-244)||(10425813-10425861)
chr2 (194-242)||(22003393-22003441)
chr2 (196-244)||(23347322-23347370)
chr2 (196-252)||(24601662-24601718)
chr2 (196-252)||(24612396-24612452)
chr2 (196-244)||(25184824-25184872)
chr2 (196-244)||(28420211-28420259)
chr2 (196-244)||(29397941-29397989)
chr2 (196-244)||(30802071-30802119)
chr2 (196-244)||(39489214-39489262)
chr2 (201-244)||(17424163-17424206)
chr2 (201-244)||(29407886-29407929)
chr2 (201-244)||(33222647-33222690)
chr2 (201-244)||(33416920-33416963)
chr2 (201-244)||(43982230-43982273)
chr2 (198-244)||(2271733-2271779)
chr2 (202-244)||(4286701-4286743)
chr2 (202-252)||(23409501-23409551)
chr2 (207-253)||(24541758-24541804)
chr2 (202-244)||(26543989-26544031)
chr2 (202-240)||(28419442-28419480)
chr2 (194-244)||(28477059-28477109)
chr2 (194-244)||(34639306-34639356)
chr2 (199-241)||(45475474-45475516)
chr2 (196-241)||(10424873-10424918)
chr2 (197-230)||(10825263-10825296)
chr2 (207-244)||(17911204-17911241)
chr2 (198-243)||(19187219-19187264)
chr2 (196-241)||(28420152-28420197)
chr2 (201-242)||(28468674-28468715)
chr2 (199-244)||(34921756-34921801)
chr2 (189-241)||(38340838-38340891)
chr2 (204-237)||(40055525-40055558)
chr2 (207-244)||(41566170-41566207)
chr2 (194-242)||(213444-213492)
chr2 (196-244)||(3795368-3795416)
chr2 (189-244)||(7780323-7780379)
chr2 (194-242)||(18003264-18003312)
chr2 (184-216)||(19694271-19694303)
chr2 (196-244)||(23346811-23346859)
chr2 (216-244)||(24754038-24754066)
chr2 (196-244)||(29905489-29905537)
chr2 (196-244)||(30803012-30803060)
chr2 (196-244)||(38779637-38779685)
chr2 (204-244)||(41497503-41497543)
chr2 (201-241)||(43536136-43536176)
[»] chr1 (80 HSPs)
chr1 (170-293)||(1167544-1167668)
chr1 (167-244)||(50037235-50037312)
chr1 (207-293)||(41459216-41459301)
chr1 (173-293)||(15549842-15549962)
chr1 (202-274)||(47585598-47585670)
chr1 (173-289)||(48812834-48812950)
chr1 (196-291)||(48815151-48815246)
chr1 (196-250)||(49502816-49502870)
chr1 (209-273)||(5845495-5845559)
chr1 (202-261)||(47586237-47586296)
chr1 (196-258)||(23603510-23603572)
chr1 (194-244)||(44336280-44336330)
chr1 (207-260)||(13147511-13147564)
chr1 (189-254)||(47653694-47653759)
chr1 (196-244)||(28456481-28456529)
chr1 (196-244)||(49875333-49875381)
chr1 (189-244)||(585682-585737)
chr1 (196-251)||(49660847-49660902)
chr1 (196-242)||(471090-471136)
chr1 (201-251)||(3941149-3941199)
chr1 (194-244)||(19161923-19161973)
chr1 (204-242)||(23603552-23603590)
chr1 (201-251)||(26606822-26606872)
chr1 (201-242)||(18609894-18609935)
chr1 (197-242)||(22524159-22524204)
chr1 (196-244)||(586599-586647)
chr1 (196-244)||(4883264-4883312)
chr1 (206-258)||(5844693-5844745)
chr1 (196-244)||(6557946-6557994)
chr1 (196-244)||(9618749-9618797)
chr1 (196-244)||(18609122-18609170)
chr1 (196-244)||(23359343-23359391)
chr1 (196-244)||(26769194-26769242)
chr1 (196-244)||(27649284-27649332)
chr1 (196-244)||(30195381-30195429)
chr1 (196-244)||(37992544-37992592)
chr1 (196-244)||(44470005-44470053)
chr1 (196-244)||(46909572-46909620)
chr1 (201-244)||(13636121-13636164)
chr1 (201-244)||(29424411-29424454)
chr1 (197-244)||(36072400-36072447)
chr1 (207-242)||(42572760-42572795)
chr1 (201-244)||(46217317-46217360)
chr1 (209-244)||(46341679-46341714)
chr1 (195-242)||(47652727-47652774)
chr1 (207-242)||(49395638-49395673)
chr1 (202-244)||(6562867-6562909)
chr1 (202-244)||(16270025-16270067)
chr1 (198-244)||(19054246-19054292)
chr1 (201-243)||(29425335-29425377)
chr1 (202-244)||(29438020-29438062)
chr1 (209-243)||(39895027-39895061)
chr1 (194-244)||(44598898-44598948)
chr1 (206-244)||(51291590-51291628)
chr1 (202-244)||(52802161-52802203)
chr1 (201-242)||(3728768-3728809)
chr1 (201-242)||(3944007-3944048)
chr1 (201-242)||(3993842-3993883)
chr1 (201-242)||(8548668-8548709)
chr1 (201-242)||(9711650-9711691)
chr1 (207-244)||(11183217-11183254)
chr1 (199-244)||(13173866-13173911)
chr1 (196-241)||(18609184-18609229)
chr1 (202-239)||(24362325-24362362)
chr1 (202-243)||(24364725-24364766)
chr1 (202-243)||(26633559-26633600)
chr1 (196-241)||(37991613-37991658)
chr1 (201-242)||(38771662-38771703)
chr1 (207-244)||(41804038-41804075)
chr1 (201-242)||(49502795-49502836)
chr1 (196-244)||(9710609-9710657)
chr1 (196-244)||(13178126-13178174)
chr1 (196-244)||(21700840-21700888)
chr1 (200-244)||(27115821-27115865)
chr1 (204-244)||(30194452-30194492)
chr1 (194-242)||(31945853-31945901)
chr1 (207-263)||(38119616-38119672)
chr1 (196-244)||(38689962-38690010)
chr1 (196-244)||(39896553-39896601)
chr1 (196-240)||(50683846-50683890)
[»] chr6 (35 HSPs)
chr6 (190-293)||(17596923-17597026)
chr6 (196-273)||(31496236-31496313)
chr6 (196-273)||(31501622-31501699)
chr6 (196-263)||(3380782-3380849)
chr6 (196-273)||(31480364-31480441)
chr6 (209-293)||(26184613-26184696)
chr6 (167-236)||(31791523-31791596)
chr6 (184-241)||(14012357-14012414)
chr6 (196-265)||(31516132-31516201)
chr6 (202-273)||(31516890-31516961)
chr6 (196-238)||(14011754-14011796)
chr6 (201-250)||(17337673-17337722)
chr6 (170-242)||(17597491-17597564)
chr6 (196-244)||(13164254-13164302)
chr6 (196-244)||(15545758-15545806)
chr6 (196-244)||(23958921-23958969)
chr6 (202-242)||(26712223-26712263)
chr6 (194-242)||(28249918-28249966)
chr6 (194-242)||(32691218-32691266)
chr6 (201-244)||(6204858-6204901)
chr6 (201-244)||(9048106-9048149)
chr6 (201-244)||(9049083-9049126)
chr6 (201-244)||(11691825-11691868)
chr6 (201-244)||(22305139-22305182)
chr6 (207-274)||(33052538-33052604)
chr6 (196-242)||(13382662-13382708)
chr6 (194-244)||(13388700-13388750)
chr6 (198-244)||(17338760-17338806)
chr6 (198-244)||(18606075-18606121)
chr6 (196-242)||(26351090-26351136)
chr6 (196-242)||(26712081-26712127)
chr6 (184-278)||(31792033-31792126)
chr6 (196-244)||(2110449-2110497)
chr6 (202-242)||(18351643-18351683)
chr6 (197-257)||(32555583-32555643)
[»] chr4 (73 HSPs)
chr4 (188-263)||(48578142-48578217)
chr4 (197-244)||(37022056-37022103)
chr4 (202-293)||(33410229-33410320)
chr4 (207-258)||(14297162-14297213)
chr4 (207-258)||(14315411-14315462)
chr4 (202-265)||(33409533-33409596)
chr4 (196-244)||(1736085-1736133)
chr4 (196-244)||(12376016-12376064)
chr4 (196-244)||(36480534-36480582)
chr4 (189-244)||(38368259-38368314)
chr4 (201-244)||(43176627-43176670)
chr4 (202-244)||(26791680-26791722)
chr4 (196-242)||(56565790-56565836)
chr4 (203-244)||(10729434-10729475)
chr4 (203-244)||(10943203-10943244)
chr4 (201-242)||(11084006-11084047)
chr4 (228-281)||(40334465-40334518)
chr4 (202-263)||(41933622-41933683)
chr4 (195-244)||(46169194-46169243)
chr4 (196-244)||(9655903-9655951)
chr4 (196-244)||(14200592-14200640)
chr4 (196-244)||(14201524-14201572)
chr4 (196-244)||(15995753-15995801)
chr4 (196-244)||(19069218-19069266)
chr4 (196-244)||(40240367-40240415)
chr4 (196-244)||(40240704-40240752)
chr4 (196-244)||(40833604-40833652)
chr4 (196-244)||(46253514-46253562)
chr4 (196-244)||(46254442-46254490)
chr4 (201-244)||(6178109-6178152)
chr4 (196-243)||(9655223-9655270)
chr4 (201-244)||(9890025-9890068)
chr4 (197-244)||(17342173-17342220)
chr4 (201-244)||(21022887-21022930)
chr4 (189-244)||(23221657-23221712)
chr4 (196-243)||(32537544-32537591)
chr4 (201-244)||(44561329-44561372)
chr4 (201-244)||(49094115-49094158)
chr4 (201-244)||(55793951-55793994)
chr4 (201-240)||(56565818-56565857)
chr4 (201-243)||(958593-958635)
chr4 (202-244)||(11494574-11494616)
chr4 (202-244)||(21018004-21018046)
chr4 (198-252)||(21470926-21470980)
chr4 (196-238)||(28157615-28157657)
chr4 (196-242)||(28234449-28234495)
chr4 (196-242)||(29307489-29307535)
chr4 (202-244)||(33383836-33383878)
chr4 (196-242)||(37563274-37563320)
chr4 (202-244)||(39590568-39590610)
chr4 (196-242)||(39773437-39773483)
chr4 (209-275)||(51686653-51686719)
chr4 (196-242)||(54634009-54634055)
chr4 (196-254)||(55704738-55704796)
chr4 (202-243)||(4783678-4783719)
chr4 (202-259)||(4786334-4786391)
chr4 (207-244)||(20208541-20208578)
chr4 (204-257)||(21538491-21538544)
chr4 (201-242)||(30726740-30726781)
chr4 (201-242)||(31425317-31425358)
chr4 (201-238)||(37563102-37563139)
chr4 (201-242)||(40358279-40358320)
chr4 (202-239)||(42528904-42528941)
chr4 (197-242)||(49563873-49563918)
chr4 (196-244)||(16984155-16984203)
chr4 (196-244)||(23220709-23220757)
chr4 (196-244)||(28322114-28322162)
chr4 (196-244)||(38369176-38369224)
chr4 (196-244)||(40832674-40832722)
chr4 (196-244)||(44051086-44051134)
chr4 (207-239)||(49422173-49422205)
chr4 (196-244)||(50447039-50447087)
chr4 (189-244)||(51037454-51037510)
[»] chr3 (85 HSPs)
chr3 (196-273)||(45507391-45507468)
chr3 (196-244)||(21343488-21343536)
chr3 (184-244)||(34712741-34712801)
chr3 (202-244)||(6144298-6144340)
chr3 (202-244)||(50604420-50604462)
chr3 (207-273)||(51325982-51326048)
chr3 (194-242)||(2645489-2645537)
chr3 (196-244)||(32744146-32744194)
chr3 (207-243)||(34712265-34712301)
chr3 (195-258)||(2830982-2831045)
chr3 (201-244)||(19341593-19341636)
chr3 (197-244)||(48250864-48250911)
chr3 (202-244)||(1294077-1294119)
chr3 (198-252)||(2062409-2062463)
chr3 (194-244)||(9429841-9429891)
chr3 (198-244)||(14043894-14043940)
chr3 (201-242)||(8156541-8156582)
chr3 (195-244)||(55175690-55175739)
chr3 (196-244)||(2063201-2063249)
chr3 (196-244)||(2743429-2743477)
chr3 (196-244)||(4002499-4002547)
chr3 (196-244)||(11248585-11248633)
chr3 (196-244)||(11249518-11249566)
chr3 (196-244)||(11269339-11269387)
chr3 (196-244)||(12897855-12897903)
chr3 (196-244)||(19341075-19341123)
chr3 (196-244)||(27739561-27739609)
chr3 (196-244)||(28816995-28817043)
chr3 (196-244)||(34543130-34543178)
chr3 (196-244)||(36812868-36812916)
chr3 (196-244)||(40798958-40799006)
chr3 (201-244)||(2647698-2647741)
chr3 (201-244)||(6143702-6143745)
chr3 (195-242)||(21343461-21343508)
chr3 (201-244)||(34049111-34049154)
chr3 (201-244)||(36134354-36134397)
chr3 (201-244)||(41803029-41803072)
chr3 (201-244)||(43476223-43476266)
chr3 (201-244)||(52570565-52570608)
chr3 (201-244)||(54389826-54389869)
chr3 (201-251)||(1293401-1293451)
chr3 (198-244)||(11270280-11270326)
chr3 (194-244)||(16484448-16484498)
chr3 (196-242)||(16852057-16852103)
chr3 (202-244)||(19440287-19440329)
chr3 (190-244)||(27738636-27738690)
chr3 (198-244)||(29918337-29918383)
chr3 (198-244)||(29967490-29967536)
chr3 (202-244)||(30839160-30839202)
chr3 (201-251)||(30943213-30943263)
chr3 (202-244)||(34645593-34645635)
chr3 (194-244)||(34691656-34691706)
chr3 (202-244)||(41579724-41579766)
chr3 (196-242)||(41844358-41844404)
chr3 (194-244)||(43478822-43478872)
chr3 (201-243)||(55176347-55176389)
chr3 (201-242)||(3953214-3953255)
chr3 (195-244)||(11094142-11094191)
chr3 (194-243)||(24700753-24700802)
chr3 (196-241)||(26246254-26246299)
chr3 (201-242)||(34051312-34051353)
chr3 (201-242)||(35743581-35743622)
chr3 (201-242)||(40877772-40877813)
chr3 (201-242)||(41844182-41844223)
chr3 (201-242)||(46697744-46697785)
chr3 (207-244)||(46989578-46989615)
chr3 (201-242)||(50477213-50477254)
chr3 (207-244)||(55385168-55385205)
chr3 (196-240)||(4015123-4015167)
chr3 (196-244)||(6489360-6489408)
chr3 (196-244)||(10492058-10492106)
chr3 (204-244)||(11095089-11095129)
chr3 (202-250)||(13896876-13896924)
chr3 (196-244)||(14042951-14042999)
chr3 (196-240)||(19843398-19843442)
chr3 (196-244)||(19988627-19988675)
chr3 (201-241)||(20918010-20918050)
chr3 (201-241)||(20926972-20927012)
chr3 (196-244)||(34542184-34542232)
chr3 (212-244)||(34648214-34648246)
chr3 (196-244)||(40872102-40872150)
chr3 (197-241)||(47443529-47443573)
chr3 (196-244)||(48246443-48246491)
chr3 (196-240)||(48566377-48566421)
chr3 (193-229)||(51693921-51693957)
[»] chr8 (71 HSPs)
chr8 (196-289)||(30755666-30755759)
chr8 (202-253)||(38330538-38330589)
chr8 (198-244)||(41855399-41855445)
chr8 (184-253)||(28694100-28694169)
chr8 (196-244)||(25994477-25994525)
chr8 (200-244)||(28646245-28646289)
chr8 (200-244)||(28650829-28650873)
chr8 (184-243)||(12206756-12206815)
chr8 (184-243)||(12451184-12451243)
chr8 (198-244)||(7168119-7168165)
chr8 (194-244)||(22550857-22550907)
chr8 (202-244)||(32383205-32383247)
chr8 (202-244)||(32437160-32437202)
chr8 (202-244)||(40039157-40039199)
chr8 (194-244)||(41016445-41016495)
chr8 (201-242)||(22014279-22014320)
chr8 (196-244)||(2712433-2712481)
chr8 (200-244)||(5533023-5533067)
chr8 (194-242)||(15030917-15030965)
chr8 (196-244)||(27501631-27501679)
chr8 (196-244)||(27502562-27502610)
chr8 (189-240)||(30025046-30025098)
chr8 (204-244)||(31745991-31746031)
chr8 (196-244)||(36345034-36345082)
chr8 (196-244)||(38604242-38604290)
chr8 (196-244)||(39277455-39277503)
chr8 (196-244)||(40745278-40745326)
chr8 (196-244)||(43363254-43363302)
chr8 (196-244)||(43519933-43519981)
chr8 (204-244)||(44052228-44052268)
chr8 (189-244)||(914748-914803)
chr8 (201-244)||(5332585-5332628)
chr8 (201-244)||(21406298-21406341)
chr8 (201-244)||(21800790-21800833)
chr8 (201-244)||(34892808-34892851)
chr8 (201-244)||(39601735-39601778)
chr8 (201-244)||(40077249-40077292)
chr8 (201-244)||(40740937-40740980)
chr8 (201-244)||(43369811-43369854)
chr8 (201-244)||(43520775-43520818)
chr8 (207-274)||(45133278-45133345)
chr8 (196-242)||(184546-184592)
chr8 (202-244)||(18438665-18438707)
chr8 (196-238)||(23578472-23578514)
chr8 (196-242)||(31185472-31185518)
chr8 (202-244)||(34366942-34366984)
chr8 (202-244)||(40039684-40039726)
chr8 (201-243)||(42602492-42602534)
chr8 (195-245)||(45252071-45252121)
chr8 (201-242)||(7344556-7344597)
chr8 (201-242)||(8419437-8419478)
chr8 (207-244)||(13783113-13783150)
chr8 (199-244)||(18205817-18205862)
chr8 (201-242)||(26663032-26663073)
chr8 (201-242)||(32375684-32375725)
chr8 (207-244)||(32382731-32382768)
chr8 (207-244)||(32436686-32436723)
chr8 (196-241)||(35962341-35962386)
chr8 (207-244)||(44727510-44727547)
chr8 (196-244)||(2335142-2335190)
chr8 (204-244)||(3695398-3695438)
chr8 (207-243)||(4529234-4529270)
chr8 (194-242)||(7340100-7340148)
chr8 (199-243)||(22577697-22577741)
chr8 (196-244)||(28617599-28617647)
chr8 (196-244)||(32584083-32584131)
chr8 (200-244)||(35047189-35047233)
chr8 (196-244)||(36314312-36314360)
chr8 (202-242)||(39582524-39582564)
chr8 (196-244)||(42732774-42732822)
chr8 (194-242)||(45066353-45066401)
[»] scaffold0794 (1 HSPs)
scaffold0794 (194-244)||(5302-5352)
[»] scaffold0016 (1 HSPs)
scaffold0016 (196-244)||(68409-68457)
[»] scaffold0388 (1 HSPs)
scaffold0388 (195-244)||(13902-13951)
[»] scaffold0199 (1 HSPs)
scaffold0199 (201-238)||(10707-10744)
[»] scaffold0494 (2 HSPs)
scaffold0494 (194-242)||(5364-5412)
scaffold0494 (196-240)||(866-910)
[»] scaffold0116 (1 HSPs)
scaffold0116 (196-244)||(15949-15997)
[»] scaffold0038 (1 HSPs)
scaffold0038 (194-242)||(50080-50128)
[»] scaffold1379 (1 HSPs)
scaffold1379 (201-244)||(433-476)
[»] scaffold0188 (1 HSPs)
scaffold0188 (184-243)||(27898-27957)
[»] scaffold0341 (1 HSPs)
scaffold0341 (202-244)||(18057-18099)
[»] scaffold0192 (1 HSPs)
scaffold0192 (207-241)||(18903-18937)
[»] scaffold0155 (1 HSPs)
scaffold0155 (202-244)||(12944-12986)
[»] scaffold0019 (1 HSPs)
scaffold0019 (206-244)||(134318-134356)
[»] scaffold0744 (1 HSPs)
scaffold0744 (201-242)||(422-463)
[»] scaffold0634 (1 HSPs)
scaffold0634 (201-242)||(7451-7492)
[»] scaffold0180 (1 HSPs)
scaffold0180 (197-242)||(15617-15662)
[»] scaffold0101 (1 HSPs)
scaffold0101 (201-242)||(41021-41062)
[»] scaffold0065 (1 HSPs)
scaffold0065 (203-243)||(65404-65444)


Alignment Details
Target: chr5 (Bit Score: 131; Significance: 5e-68; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 91 - 274
Target Start/End: Original strand, 13707816 - 13708003
Alignment:
Q  91 atatgaagaagaggaggaggaagaagaaggttttcctcaagtttgaaagttagttcttatgtgaaactcagaacaggaagaagatgatgatga----tct 186  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    |||    
T  13707816 atatgaagaagaggaggaggaggaagagggttttcctcaagtttgaaagtttgttcttatgtgaaactcagaacaggaagaagatgatgatgataattct 13707915  T
Q  187 gggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactg 274  Q
    || |||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||| |||| | ||||||||    
T  13707916 ggattttcatttttctcggtagttaactgccgatgttttcctcggtagttaactgcagccacttttatttttcctcggcagttaactg 13708003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 184 - 289
Target Start/End: Complemental strand, 29430113 - 29430008
Alignment:
Q  184 tctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgtagatgggg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| | ||||||||||| |||| | |||||||| ||| ||||    
T  29430113 tctgggttttcatttttctcggtagttaactgccgaggttttcctcggcacttaactgcagccggttttatttttcctcggcagttaactgcagaggggg 29430014  T
Q  284 tatttt 289  Q
    ||||||    
T  29430013 tatttt 29430008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 184 - 293
Target Start/End: Original strand, 29430560 - 29430669
Alignment:
Q  184 tctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgtagatgggg 283  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||| | ||||||||||| |||| | |||||||| ||| ||||    
T  29430560 tctgggttttcattttcctcggtagttaactgccgaggttttcctcagcagttaactgcagccggttttatttttcctcggcagttaactgcagaggggg 29430659  T
Q  284 tattttggta 293  Q
    ||||||||||    
T  29430660 tattttggta 29430669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 39742675 - 39742557
Alignment:
Q  173 gatgatgatgatctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaac 272  Q
    ||||||||||| ||||||||| ||||  |||||||||||||||| |||||||||||||| |||||||||||| | ||||||||||| |||| | ||||||    
T  39742675 gatgatgatga-ctgggttttaatttc-ctcggtagttaactgctgaggttttcctcggcagttaactgcagtcggttttatttttcctcggcagttaac 39742578  T
Q  273 tgtagatggggtattttggta 293  Q
    || ||| ||||||||||||||    
T  39742577 tgcagagggggtattttggta 39742557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 42099081 - 42099169
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgtagatggggtatttt 289  Q
    |||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||| |||||||| ||| | ||||||||    
T  42099081 ctcggtagttaactgccgaggttttcctcgatagttaactacagccagttttattttttctcgacagttaactgcagaggaggtatttt 42099169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 293
Target Start/End: Complemental strand, 13707512 - 13707405
Alignment:
Q  186 tgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgtagatggggta 285  Q
    |||||||||||||| |||||||||||||||||||||||||  |||||| |||||||||| |  |||||||||| |||| | |||||||| ||| ||||||    
T  13707512 tgggttttcattttcctcggtagttaactgccgaggtttttttcggtacttaactgcagccgattttatttttcctcggcagttaactgcagagggggta 13707413  T
Q  286 ttttggta 293  Q
    ||||||||    
T  13707412 ttttggta 13707405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 293
Target Start/End: Original strand, 27532611 - 27532707
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgtagatggggtattttggta 293  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||| | ||||||||| || ||||||||||||||    
T  27532611 ttttcctcggcagttaactgccgaggttttcctcgatagttaactgcagtcagttttatttttcctcggcagttaactgtcga-ggggtattttggta 27532707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 184 - 293
Target Start/End: Complemental strand, 42098393 - 42098285
Alignment:
Q  184 tctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgtagatgggg 283  Q
    |||||||||| ||||  ||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| |||| | |||||||| |||  ||     
T  42098393 tctgggttttaatttc-ctcggtagttaaccgccgaggttttcctcggcagttaactgcagccagttttatttttcctcggcagttaactgcagagagga 42098295  T
Q  284 tattttggta 293  Q
    ||||||||||    
T  42098294 tattttggta 42098285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 290
Target Start/End: Complemental strand, 13665505 - 13665401
Alignment:
Q  186 tgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgtagatggggta 285  Q
    ||||||||||||||  |||||||||||||| ||||||||||||| | |||||||||||| | ||||||||||| |||| | |||||||  ||| ||||||    
T  13665505 tgggttttcattttcttcggtagttaactgtcgaggttttcctcaggagttaactgcagccggttttatttttcctcggcagttaactacagagggggta 13665406  T
Q  286 ttttg 290  Q
    |||||    
T  13665405 ttttg 13665401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 13838424 - 13838466
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  13838424 tcggcagttaactgccgaggttttcctcggtagttaactgcag 13838466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 18512315 - 18512253
Alignment:
Q  189 gttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagtttta 253  Q
    ||||||||||||||||||||||||||||||| ||||  ||||| |||||||||||| | ||||||    
T  18512315 gttttcatttttctcggtagttaactgccgaagttt--ctcggcagttaactgcagccggtttta 18512253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 20509545 - 20509592
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    |||| |||||||||| |||||||| |||||||||||||||||||||||    
T  20509545 ttttcctcggtagtttactgccgaagttttcctcggtagttaactgca 20509592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 25983443 - 25983400
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||||||| |||| ||||||||||||||||||||||||    
T  25983443 ctcggtagttaactaccgatgttttcctcggtagttaactgcag 25983400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 39743147 - 39743190
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||| |||||||||||||||||||||||| ||||||||||||    
T  39743147 ctcggtggttaactgccgaggttttcctcggcagttaactgcag 39743190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 244
Target Start/End: Complemental strand, 34682330 - 34682288
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||| |||||||||||||||| ||||||||||||    
T  34682330 tcggtagttaactcccgaggttttcctcggcagttaactgcag 34682288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 18512634 - 18512703
Alignment:
Q  184 tctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagtttta 253  Q
    |||| |||||||||||| |||| ||||| |||| ||| |||||||||| |||||||||||| | ||||||    
T  18512634 tctgagttttcatttttttcggcagttagctgctgagattttcctcggcagttaactgcagccggtttta 18512703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 28876717 - 28876676
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| ||||||||||||||||||||||||| ||||||||||    
T  28876717 ctcggcagttaactgccgaggttttcctcgggagttaactgc 28876676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 3603148 - 3603196
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcaggcagtt 250  Q
    |||| |||||||| |||||||||||||||| |||||||||||| |||||    
T  3603148 tcggcagttaactaccgaggttttcctcggaagttaactgcagccagtt 3603196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 20421985 - 20421949
Alignment:
Q  206 tagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||||||||||| ||||||||||||||||||||||    
T  20421985 tagttaactgccgaagttttcctcggtagttaactgc 20421949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 25890073 - 25890025
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||| ||| |||||||||||||||||||||||||||||    
T  25890073 ttttcctcggcagtttactaccgaggttttcctcggtagttaactgcag 25890025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 27531990 - 27531926
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaa 271  Q
    ||||||||||||||||||||||| | ||||||||||||    |||||||||| |||||| |||||    
T  27531990 agttaactgccgaggttttcctctgaagttaactgcagctgattttatttttcctcgacagttaa 27531926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 30711151 - 30711199
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||| |||||||||||| || ||||||||||||||| ||||||||||    
T  30711151 cattttcctcggtagttaaatgtcgaggttttcctcggcagttaactgc 30711199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 41065963 - 41065915
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||| ||||| ||||||| ||||||||||| ||||||||||||    
T  41065963 tttttctcgggagttacctgccgaagttttcctcggaagttaactgcag 41065915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 42912878 - 42912918
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||| ||||||||||||| ||||||||||||||||||||||    
T  42912878 tcggcagttaactgccgaagttttcctcggtagttaactgc 42912918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 19037469 - 19037512
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  19037469 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 19037512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 30966643 - 30966732
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgtagatggggtattttggt 292  Q
    ||||| ||||||||||||| ||||||||| ||||||| |||||| | ||| || |||| |||||| ||||||||  || |||||||||||||    
T  30966643 ctcggcagttaactgccgaagttttcctc-gtagttagctgcagccggttcta-ttttcctcgacagttaactgccgaaggggtattttggt 30966732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 242
Target Start/End: Original strand, 35564296 - 35564331
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||| |||||||||||||||||||||||||||||    
T  35564296 agttaattgccgaggttttcctcggtagttaactgc 35564331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 8046 - 8088
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    |||||||||||||| ||||| |||||||||| |||||||||||    
T  8046 ctcggtagttaactaccgagattttcctcggcagttaactgca 8088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 4204207 - 4204253
Alignment:
Q  198 tttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| |||||||| |||||||||||||||  ||||||||||||    
T  4204207 tttctcggcagttaactaccgaggttttcctcgacagttaactgcag 4204253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 8679639 - 8679585
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagtt 250  Q
    |||| |||||||||| |||| ||| | |||||||||||||||||||||| |||||    
T  8679639 ttttcctcggtagtttactgtcgaagatttcctcggtagttaactgcagccagtt 8679585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 28388519 - 28388561
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||| |||||||||||||||| ||||||||||||    
T  28388519 tcggcagttaactaccgaggttttcctcggcagttaactgcag 28388561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 241
Target Start/End: Complemental strand, 35926430 - 35926396
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactg 241  Q
    |||||||| ||||||||||||||||||||||||||    
T  35926430 agttaactaccgaggttttcctcggtagttaactg 35926396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 11346075 - 11346038
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  11346075 agttaactaccgaggttttcctcggcagttaactgcag 11346038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 13837798 - 13837757
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  13837798 ctcggcagttaactaccgaggttttcctcggcagttaactgc 13837757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Original strand, 17966891 - 17966928
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  17966891 agttaactaccgagattttcctcggtagttaactgcag 17966928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 18538332 - 18538377
Alignment:
Q  199 ttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||| |||||||| |||| ||||||||||| ||||||||||||    
T  18538332 ttctcggcagttaactaccgaagttttcctcggcagttaactgcag 18538377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 244
Target Start/End: Complemental strand, 25497587 - 25497542
Alignment:
Q  199 ttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||| |||||||| ||||| |||||||||| ||||||||||||    
T  25497587 ttctcggcagttaactaccgagattttcctcggcagttaactgcag 25497542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 27660021 - 27659976
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaac 239  Q
    |||||| ||||| |||||||| |||||||||||||||| |||||||    
T  27660021 cattttcctcggcagttaactaccgaggttttcctcggcagttaac 27659976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 28238213 - 28238172
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  28238213 ctcggcagttaactaccgaggttttcctcggcagttaactgc 28238172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 41201796 - 41201759
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  41201796 agttaactaccgaggttttcctcggcagttaactgcag 41201759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 3891562 - 3891514
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||| | ||||||||||| ||||||||||||    
T  3891562 ttttcctcggtagtttactgccaaagttttcctcggcagttaactgcag 3891514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 3892434 - 3892482
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||| ||||| |||||||| ||||||||||| ||||||||||||    
T  3892434 ttttcctcgatagtttactgccgaagttttcctcggcagttaactgcag 3892482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 8680240 - 8680288
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||| |||||||| |||||||||| |||||||||||||    
T  8680240 ttttcctcggaagtttactgccgaagttttcctcgatagttaactgcag 8680288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 18563926 - 18563966
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagtt 236  Q
    ||||| ||||||||| |||||||| ||||||||||||||||    
T  18563926 tttttatcggtagtttactgccgaagttttcctcggtagtt 18563966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 30705210 - 30705170
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||||||||||||||||||   ||||||||||||||||||    
T  30705210 tcggtagttaactgccgaggaaatcctcggtagttaactgc 30705170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 34122603 - 34122555
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||||||| ||||| |||||||||| ||||||||||||    
T  34122603 ttttcctcggcagttaactaccgagcttttcctcggcagttaactgcag 34122555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 27919458 - 27919551
Alignment:
Q  91 atatgaagaagaggaggaggaagaagaaggttttcctcaagtttgaaagttagttcttatgtgaaactcagaacaggaagaagatgatgatgat 184  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||| || ||||||    
T  27919458 atatgaagaagaggaggaggaagaagagggttttcctgaagtttgaaagtttgttcttatgtgaaactcataacaggaagaagaagaagatgat 27919551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 167 - 290
Target Start/End: Complemental strand, 27919145 - 27919018
Alignment:
Q  167 gaagaagatgatgatgat----ctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctc 262  Q
    ||||||||||||||||||    ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| ||||  |  |||||||||| |||    
T  27919145 gaagaagatgatgatgataattctgggttttcattttcctctgtagttaactgccgaggttttcctcggaagttaaatgcaatcgattttatttttcctc 27919046  T
Q  263 gaccgttaactgtagatggggtattttg 290  Q
    ||| |||||||  ||| |||||||||||    
T  27919045 gacagttaactacagagggggtattttg 27919018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 31323140 - 31323084
Alignment:
Q  184 tctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaact 240  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  31323140 tctgggttttcattttcctcggtagttaactgccgaggtttttctcggaagttaact 31323084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 36805601 - 36805539
Alignment:
Q  211 aactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaact 273  Q
    |||||||||| ||||||||||||| |||||||| || |||||||||||||||||| |||||||    
T  36805601 aactgccgagattttcctcggtagctaactgcaagcggttttattttttctcgacagttaact 36805539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 33018473 - 33018550
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaact 273  Q
    ||||||||||||||||| |||||||||||||||| ||| |||||||||| |  |||||||||| ||| || |||||||    
T  33018473 tttttctcggtagttaagtgccgaggttttcctcagtaattaactgcagccgattttatttttcctcaacagttaact 33018550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 293
Target Start/End: Complemental strand, 45350980 - 45350889
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgtagatggggtattttggta 293  Q
    |||||||||||||||||||||    |||||| |||||||||||| | ||||||||||| |||| | |||||||| ||| ||||||||||||||    
T  45350980 ctcggtagttaactgccgaggaaa-cctcggcagttaactgcagccggttttatttttcctcggcagttaactgcagagggggtattttggta 45350889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 36781446 - 36781491
Alignment:
Q  199 ttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||    
T  36781446 ttctcggcagttaactgccgaggttttcctcgggagttaactgcag 36781491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 48901435 - 48901484
Alignment:
Q  195 atttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  48901435 attttcctcggtagtttactgccgaagttttcctcggtagttaactgcag 48901484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 31324789 - 31324844
Alignment:
Q  184 tctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaact 240  Q
    ||||| |||||||||  |||| |||||||||||||||||||||||||||||||||||    
T  31324789 tctggattttcatttc-ctcgatagttaactgccgaggttttcctcggtagttaact 31324844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 240
Target Start/End: Original strand, 10225843 - 10225881
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaact 240  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  10225843 tcggtagttaactgccgagattttcctcggtagttaact 10225881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 17840882 - 17840932
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||| ||||| |||||||| |||||||||||||||| ||||||||||||    
T  17840882 cattttcctcggcagttaactaccgaggttttcctcggcagttaactgcag 17840932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 48590339 - 48590381
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  48590339 tcggcagttaactgccgagattttcctcggtagttaactgcag 48590381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 30791007 - 30791048
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||||||||||||||    
T  30791007 ctcggcagttaactaccgaggttttcctcggtagttaactgc 30791048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 35840116 - 35840165
Alignment:
Q  195 atttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||||||||| |||||||| ||||||||||| | ||||||||||    
T  35840116 atttttctcggtagtttactgccgaagttttcctcggaaattaactgcag 35840165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 38265513 - 38265476
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  38265513 agttaactgccgaggttttcctcagtagttaactgcag 38265476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 42795108 - 42795153
Alignment:
Q  197 ttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  42795108 ttttctcggcagttaactgccgaagttttcctcggcagttaactgc 42795153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 7148 - 7100
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  7148 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 7100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 8041 - 8089
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  8041 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 8089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 8522141 - 8522185
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcaggcagttt 251  Q
    ||||||||||||||||||||||||| |||||||| ||| ||||||    
T  8522141 agttaactgccgaggttttcctcgggagttaactacagccagttt 8522185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 15070436 - 15070388
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  15070436 cattttcctcggcagttaactaccgaggttttcctcggcagttaactgc 15070388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 18105454 - 18105406
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  18105454 cattttcctcggcagttaactaccgaggttttcctcggcagttaactgc 18105406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 30468529 - 30468481
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||||| |||||||| |||||| ||| |||||||||||||    
T  30468529 tttttctcggtagtttactgccgaagttttcttcgatagttaactgcag 30468481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 42583054 - 42583102
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  42583054 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 42583102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 45791384 - 45791336
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| ||| |||| ||||||||||||||||||||||||    
T  45791384 ttttcctcggtagtttactaccgaagttttcctcggtagttaactgcag 45791336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 46907615 - 46907567
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  46907615 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 46907567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 47750611 - 47750555
Alignment:
Q  189 gttttcatttttc-tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||| ||||| ||| |||||||| ||||||||||| ||||||||||||    
T  47750611 gttttcatttttcctcggtggtttactgccgaagttttcctcgggagttaactgcag 47750555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 49140732 - 49140684
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  49140732 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 49140684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 9367723 - 9367766
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  9367723 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 9367766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 27919573 - 27919624
Alignment:
Q  223 tttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactg 274  Q
    ||||||||||||||||||||||   |||||||||||| ||||| ||||||||    
T  27919573 tttcctcggtagttaactgcagttggttttattttttttcgacagttaactg 27919624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 30355238 - 30355281
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  30355238 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 30355281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 42499483 - 42499440
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  42499483 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 42499440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 12210584 - 12210630
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||    
T  12210584 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgc 12210630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 243
Target Start/End: Complemental strand, 33603267 - 33603233
Alignment:
Q  209 ttaactgccgaggttttcctcggtagttaactgca 243  Q
    ||||||||||||||||||||||| |||||||||||    
T  33603267 ttaactgccgaggttttcctcgggagttaactgca 33603233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 38555413 - 38555455
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||    
T  38555413 tcggcagttaactgccgaagttttcctcggcagttaactgcag 38555455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 240
Target Start/End: Complemental strand, 47061003 - 47060961
Alignment:
Q  198 tttctcggtagttaactgccgaggttttcctcggtagttaact 240  Q
    |||||||| |||||||| |||||||||||||||| ||||||||    
T  47061003 tttctcggcagttaactaccgaggttttcctcggcagttaact 47060961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 275
Target Start/End: Complemental strand, 47776406 - 47776332
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgt 275  Q
    ||||| |||||| | |||||||||||||||| |||||||||||| ||| ||| |  ||||||| | |||||||||    
T  47776406 ctcggcagttaattaccgaggttttcctcggcagttaactgcagccagatttttaatttctcggcagttaactgt 47776332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Original strand, 9494811 - 9494848
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  9494811 agttaactcccgaggttttcctcggcagttaactgcag 9494848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Original strand, 10098122 - 10098159
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  10098122 agttaactcccgaggttttcctcggcagttaactgcag 10098159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 18219942 - 18219975
Alignment:
Q  210 taactgccgaggttttcctcggtagttaactgca 243  Q
    |||||||||| |||||||||||||||||||||||    
T  18219942 taactgccgaagttttcctcggtagttaactgca 18219975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 29112441 - 29112404
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  29112441 agttaactgccgaagttttcctcggcagttaactgcag 29112404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Original strand, 34742400 - 34742437
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  34742400 agttaacttccgaggttttcctcggcagttaactgcag 34742437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 35606863 - 35606822
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  35606863 ctcggcagttaactaccgaggttttcctcggcagttaactgc 35606822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 41884125 - 41884166
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  41884125 ctcggcagttaacttccgaggttttcctcggcagttaactgc 41884166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 45767860 - 45767901
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  45767860 ctcggcagttaactaccgaggttttcctcggcagttaactgc 45767901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 9491482 - 9491394
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgtagatggggtatttt 289  Q
    ||||||||||||||| |||||   |||||||||||||||||||| | ||||  | ||| |||| | |||||||   |||||||||||||    
T  9491482 ctcggtagttaactgtcgaggaaatcctcggtagttaactgcagccggtttcgtatttcctcggcagttaactaccgatggggtatttt 9491394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 11629766 - 11629822
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcg 263  Q
    ||||||||||||||||||||||||  |||||||||| | | |||| |||||| ||||    
T  11629766 agttaactgccgaggttttcctcgacagttaactgccgccggtttcatttttcctcg 11629822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 244
Target Start/End: Original strand, 22640673 - 22640709
Alignment:
Q  208 gttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  22640673 gttaagtgccgaggtttttctcggtagttaactgcag 22640709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 26833468 - 26833516
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||| | |||||| |||||||||||||||||    
T  26833468 ttttcctcggtagtttactgccaaagttttcttcggtagttaactgcag 26833516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 29097854 - 29097902
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||| | ||||||||  |||||||||||||||||||||||    
T  29097854 ttttcctcggtagattactgccgaatttttcctcggtagttaactgcag 29097902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 29113106 - 29113154
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||| | ||||||||  |||||||||||||||||||||||    
T  29113106 ttttcctcggtagattactgccgaatttttcctcggtagttaactgcag 29113154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 38266098 - 38266146
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||| ||||| |||||||| |||||||| |||||||||||||||    
T  38266098 ttttcctcgatagtttactgccgaagttttccttggtagttaactgcag 38266146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 42794272 - 42794224
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||| |||||||| ||||||||||| ||||||||||||    
T  42794272 ttttcctcgggagtttactgccgaagttttcctcggcagttaactgcag 42794224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 49141615 - 49141663
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||| ||||| |||||||| ||||||||||| ||||||||||||    
T  49141615 ttttcctcgatagtttactgccgaagttttcctcggcagttaactgcag 49141663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 184 - 293
Target Start/End: Complemental strand, 14456593 - 14456484
Alignment:
Q  184 tctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgtagatgggg 283  Q
    ||||| ||||| |||| ||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||| | |||||||| ||| ||||    
T  14456593 tctggattttcgttttcctcggtagttaactgccgaggttttcctcggcagttaactgcagccggttttatttttgctcggcagttaactgcagaggggg 14456494  T
Q  284 tattttggta 293  Q
    ||||||||||    
T  14456493 tattttggta 14456484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 2983491 - 2983431
Alignment:
Q  184 tctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||    
T  2983491 tctggattttcattttccgcggcagttaactgccgaggttttcctcggtagttaactgcag 2983431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 222 - 293
Target Start/End: Complemental strand, 19694291 - 19694220
Alignment:
Q  222 ttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgtagatggggtattttggta 293  Q
    ||||||||||||||||||||||| | ||||| |||||||||||| |||||||  ||| ||||||||||||||    
T  19694291 ttttcctcggtagttaactgcagccggttttgttttttctcgacagttaactacagagggggtattttggta 19694220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 244
Target Start/End: Complemental strand, 43618646 - 43618604
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  43618646 tcggtagttaactgccgaggttttcctcggtagttaactgcag 43618604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 275
Target Start/End: Complemental strand, 40055444 - 40055377
Alignment:
Q  208 gttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgt 275  Q
    |||||||||| |||||||||||||||||||||||||| | |||||| |||| |||||  |||||||||    
T  40055444 gttaactgccaaggttttcctcggtagttaactgcagccggttttagttttcctcgatagttaactgt 40055377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 40055491 - 40055537
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||    
T  40055491 ttttcctcggtagttaactgccgaggttttccttggtagttaactgc 40055537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 40221130 - 40221172
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  40221130 tcggcagttaactgccgaggttttcctcggtagttaactgcag 40221172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 41183216 - 41183266
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||    
T  41183216 cattttcctcggcagttaactaccgaggttttcctcggtagttaactgcag 41183266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 31568007 - 31567942
Alignment:
Q  209 ttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactg 274  Q
    |||| |||||||||||| |||| ||||||||||||| | | |||||||||||||||| ||||||||    
T  31568007 ttaattgccgaggtttttctcgatagttaactgcagtcggatttattttttctcgacagttaactg 31567942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 9088791 - 9088743
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  9088791 tttttctcggtagtttactgccgaaattttcctcggtagttaactgcag 9088743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 29600839 - 29600791
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  29600839 ttttcctcggtagtttactgccgaagttttcctcggtagttaactgcag 29600791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 41565391 - 41565351
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  41565391 tcggcagttaactgccgaggttttcctcggtagttaactgc 41565351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 19694774 - 19694825
Alignment:
Q  164 caggaagaagatgatgatgatctgggttttcatttttctcggtagttaactg 215  Q
    |||||||| ||||||||| || ||||||||||||||| ||||||||||||||    
T  19694774 caggaagatgatgatgataatttgggttttcatttttgtcggtagttaactg 19694825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 19846962 - 19846915
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    |||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  19846962 ttttcctccgtagttaattgccgaggttttcctcggtagttaactgca 19846915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 31974246 - 31974289
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  31974246 ctcggcagttaactgccgagattttcctcggtagttaactgcag 31974289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 6638010 - 6638052
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    |||||||||||| ||||||||||||||||||||||||| ||||    
T  6638010 ctcggtagttaagtgccgaggttttcctcggtagttaattgca 6638052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 39489951 - 39490008
Alignment:
Q  188 ggttttcatttttc-tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| ||||| ||||||||| |||||||| ||||||||||| ||||||||||||    
T  39489951 ggttttcagttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 39490008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 44100797 - 44100838
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||||||||||| |||||||||||||||| ||||||||||    
T  44100797 ctcggtagttaactaccgaggttttcctcggcagttaactgc 44100838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 4014343 - 4014295
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||| | |||||||| ||||||||||||||||||||||||    
T  4014343 ttttcctcggtagcttactgccgaagttttcctcggtagttaactgcag 4014295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 4015100 - 4015148
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||| ||||||||||||||||||    
T  4015100 ttttcctcggtagtttactgccgaagtttttctcggtagttaactgcag 4015148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 6233572 - 6233620
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| | |||||| ||||||||||||||||||||||||    
T  6233572 ttttcctcggtagtttattgccgaagttttcctcggtagttaactgcag 6233620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 10425813 - 10425861
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  10425813 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 10425861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 22003393 - 22003441
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  22003393 cattttcctcggcagttaactaccgaggttttcctcggcagttaactgc 22003441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 23347322 - 23347370
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| ||||| || |||||||||||||||||||||||||||||    
T  23347322 ttttcctcggcagttagctaccgaggttttcctcggtagttaactgcag 23347370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 24601718 - 24601662
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagtttt 252  Q
    |||| ||||| |||||||| |||| | |||||||||||||||||||||| |||||||    
T  24601718 ttttcctcggcagttaactaccgaagatttcctcggtagttaactgcagccagtttt 24601662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 24612396 - 24612452
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagtttt 252  Q
    |||| ||||| |||||||| |||| | |||||||||||||||||||||| |||||||    
T  24612396 ttttcctcggcagttaactaccgaagatttcctcggtagttaactgcagccagtttt 24612452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 25184824 - 25184872
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||||||    
T  25184824 ttttcctcggcagttaactaccgaggttttcctcggcagttaactgcag 25184872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 28420211 - 28420259
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  28420211 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 28420259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 29397989 - 29397941
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||||||    
T  29397989 ttttcctcggcagttaactcccgaggttttcctcggcagttaactgcag 29397941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 30802119 - 30802071
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  30802119 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 30802071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 39489262 - 39489214
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||||| |||||||| ||||||||||  ||||||||||||    
T  39489262 tttttctcggtagtttactgccgaagttttcctcgacagttaactgcag 39489214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 17424206 - 17424163
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  17424206 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 17424163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 29407886 - 29407929
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||    
T  29407886 ctcggcagttaactgccgaagttttcctcgttagttaactgcag 29407929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 33222690 - 33222647
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||    
T  33222690 ctcggcagttaactgccgaagttttcctcggcagttaactgcag 33222647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 33416920 - 33416963
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||| |||||||| ||| ||||||||||||||||||||    
T  33416920 ctcggtagtttactgccgaagttatcctcggtagttaactgcag 33416963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 43982273 - 43982230
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  43982273 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 43982230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 2271733 - 2271779
Alignment:
Q  198 tttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| ||||||||||||| ||||||||||  ||||||||||||    
T  2271733 tttctcggcagttaactgccgaagttttcctcgacagttaactgcag 2271779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 4286701 - 4286743
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||||||||||||| |||| ||||||||||||    
T  4286701 tcggcagttaactgccgaggttttcatcggaagttaactgcag 4286743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 252
Target Start/End: Original strand, 23409501 - 23409551
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcaggcagtttt 252  Q
    |||| |||| ||| |||||||||||||||| |||||||||||| |||||||    
T  23409501 tcggcagtttacttccgaggttttcctcggcagttaactgcagccagtttt 23409551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 24541804 - 24541758
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcaggcagtttta 253  Q
    |||||||||||||||||||| |||| ||||||||| || ||||||||    
T  24541804 agttaactgccgaggttttcttcggaagttaactgaagccagtttta 24541758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 26543989 - 26544031
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||| |||||||||||||| ||||||||||||||    
T  26543989 tcggcagttaactaccgaggttttcctcagtagttaactgcag 26544031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 28419480 - 28419442
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaact 240  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  28419480 tcggcagttaactgccgaagttttcctcggtagttaact 28419442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 28477059 - 28477109
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||| || || |||||||| |||||||||||||||| ||||||||||||    
T  28477059 cattttccttggcagttaactaccgaggttttcctcggcagttaactgcag 28477109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 34639306 - 34639356
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||||| |||||||| |||| ||||||||| | ||||||||||||    
T  34639306 catttttctcggcagttaactcccgatgttttcctcagcagttaactgcag 34639356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 241
Target Start/End: Complemental strand, 45475516 - 45475474
Alignment:
Q  199 ttctcggtagttaactgccgaggttttcctcggtagttaactg 241  Q
    ||||||| |||||||| |||||||||||||||| |||||||||    
T  45475516 ttctcggaagttaactaccgaggttttcctcggcagttaactg 45475474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 10424918 - 10424873
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactg 241  Q
    |||| |||||||||| |||||||| ||||||||||| |||||||||    
T  10424918 ttttcctcggtagtttactgccgaagttttcctcggcagttaactg 10424873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 230
Target Start/End: Complemental strand, 10825296 - 10825263
Alignment:
Q  197 ttttctcggtagttaactgccgaggttttcctcg 230  Q
    ||||||||| ||||||||||||||||||||||||    
T  10825296 ttttctcggcagttaactgccgaggttttcctcg 10825263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 17911241 - 17911204
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  17911241 agttaactgctgaggttttcctcggtaattaactgcag 17911204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 19187219 - 19187264
Alignment:
Q  198 tttctcggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    |||||||| |||||||| |||||||||||||||| || ||||||||    
T  19187219 tttctcggcagttaactaccgaggttttcctcggcaggtaactgca 19187264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 28420152 - 28420197
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactg 241  Q
    |||| |||||||||| |||||||| ||||||||||| |||||||||    
T  28420152 ttttcctcggtagtttactgccgaagttttcctcggcagttaactg 28420197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 28468715 - 28468674
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  28468715 ctcggcagttaactaccgaggttttcctcggcagttaactgc 28468674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 34921756 - 34921801
Alignment:
Q  199 ttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||| |||||||| |||||||||||||| | ||||||||||||    
T  34921756 ttctcggcagttaactaccgaggttttcctcagcagttaactgcag 34921801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 38340838 - 38340891
Alignment:
Q  189 gttttcatttttct-cggtagttaactgccgaggttttcctcggtagttaactg 241  Q
    ||||||| |||||| |||||||| |||||||| ||||| |||||||||||||||    
T  38340838 gttttcagttttcttcggtagtttactgccgaagtttttctcggtagttaactg 38340891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 40055525 - 40055558
Alignment:
Q  204 ggtagttaactgccgaggttttcctcggtagtta 237  Q
    ||||||||||||||||||||||||| ||||||||    
T  40055525 ggtagttaactgccgaggttttccttggtagtta 40055558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Original strand, 41566170 - 41566207
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  41566170 agttaattgccgaggttttcctcggtagttaattgcag 41566207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 213444 - 213492
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||| ||||| |||||||| ||||||  |||||||||||||||||||    
T  213444 cattttcctcggcagttaactaccgaggaattcctcggtagttaactgc 213492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 3795416 - 3795368
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||||||| || ||||||||||||| ||||||||||||    
T  3795416 ttttcctcggcagttaacttccaaggttttcctcggcagttaactgcag 3795368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 7780323 - 7780379
Alignment:
Q  189 gttttcatttttct-cggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||| |||||| | |||||| |||| ||| ||||||||||||||||||||||||    
T  7780323 gttttcagttttcttctgtagtttactgtcgaagttttcctcggtagttaactgcag 7780379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 18003264 - 18003312
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||| ||||| |||||||| ||||||  |||||||||||||||||||    
T  18003264 cattttcctcggcagttaactaccgaggaattcctcggtagttaactgc 18003312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 19694303 - 19694271
Alignment:
Q  184 tctgggttttcatttttctcggtagttaactgc 216  Q
    |||||||||||||||| ||||||||||||||||    
T  19694303 tctgggttttcattttcctcggtagttaactgc 19694271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 23346859 - 23346811
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||||||| ||||||||||||| || ||||||||||||    
T  23346859 ttttcctcggcagttaactaccgaggttttccttggcagttaactgcag 23346811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 244
Target Start/End: Original strand, 24754038 - 24754066
Alignment:
Q  216 ccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||||||||||||||||||||||    
T  24754038 ccgaggttttcctcggtagttaactgcag 24754066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 29905537 - 29905489
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| ||| |||| ||||||||||||| ||||||||||    
T  29905537 ttttcctcggtagtttactaccgaagttttcctcggtaattaactgcag 29905489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 30803012 - 30803060
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||| ||| ||||||||||| ||||||||||||    
T  30803012 ttttcctcggtagtttactgtcgaagttttcctcggcagttaactgcag 30803060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 38779637 - 38779685
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| ||||| || ||||||||||| ||||||||||||    
T  38779637 ttttcctcggtagtttactgcagaagttttcctcgggagttaactgcag 38779685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 41497543 - 41497503
Alignment:
Q  204 ggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||| |||||||||||||||| | ||||||||||    
T  41497543 ggtagttaactaccgaggttttcctcggcaattaactgcag 41497503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 43536176 - 43536136
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactg 241  Q
    ||||| |||||||| |||||||||||||||| |||||||||    
T  43536176 ctcggcagttaactaccgaggttttcctcggcagttaactg 43536136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 170 - 293
Target Start/End: Complemental strand, 1167668 - 1167544
Alignment:
Q  170 gaagatgatgatgat-ctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgt 268  Q
    |||||||||||| || ||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||||||| | |||||| |||| |||| | ||    
T  1167668 gaagatgatgataattctgggttttaattttcttcggtagttaactgccgaggttttcctcgatagttaactgcagtcggttttacttttcctcggcagt 1167569  T
Q  269 taactgtagatggggtattttggta 293  Q
    |||||| ||| ||||||||||||||    
T  1167568 taactgcagagggggtattttggta 1167544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 244
Target Start/End: Original strand, 50037235 - 50037312
Alignment:
Q  167 gaagaagatgatgatgatctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| ||||||||| || |  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  50037235 gaagatgatgatgataattttagttttcatttttttcggtagttaactgccgaggttttcctcggtagttaactgcag 50037312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 293
Target Start/End: Original strand, 41459216 - 41459301
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgtagatggggtattttggta 293  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||||||| |||| | ||||||||| || ||||||||||||||    
T  41459216 agttaactgccgaggttttcctcggtagttaactgcagctggttttatttttcctcggcagttaactgtcga-ggggtattttggta 41459301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 173 - 293
Target Start/End: Complemental strand, 15549962 - 15549842
Alignment:
Q  173 gatgatgatgatctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaac 272  Q
    ||||||| | || |||||||||||||| ||||||||||||| ||||||||||||||| | |||||||||||| |  |||||| |||  ||| | ||||||    
T  15549962 gatgatgttaatttgggttttcattttcctcggtagttaacagccgaggttttcctctgcagttaactgcagcctattttatctttcttcggcagttaac 15549863  T
Q  273 tgtagatggggtattttggta 293  Q
    || |||  |||||||||||||    
T  15549862 tgcagagtgggtattttggta 15549842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 274
Target Start/End: Complemental strand, 47585670 - 47585598
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactg 274  Q
    |||| |||||||||||||||||||||||||||||||||||||| |  |||||||||| |||||| || |||||    
T  47585670 tcggaagttaactgccgaggttttcctcggtagttaactgcagccgattttatttttcctcgacagtcaactg 47585598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 289
Target Start/End: Complemental strand, 48812950 - 48812834
Alignment:
Q  173 gatgatgatgatctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaac 272  Q
    ||||||| | || |||||||||||||| |||| |||||||| ||||||||||||||  | ||||||||||||   ||||||||||| |||| | ||||||    
T  48812950 gatgatgttaatttgggttttcattttcctcgctagttaacagccgaggttttcctatgcagttaactgcagcaggttttatttttcctcggcagttaac 48812851  T
Q  273 tgtagatggggtatttt 289  Q
    || |||  |||||||||    
T  48812850 tgcagagtgggtatttt 48812834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 48815151 - 48815246
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgtagatggggtattttgg 291  Q
    |||| ||||||||||||   |||||||||||||||| |||||| ||||||| ||||||||||| |||||| |||||||| |||  || ||||||||    
T  48815151 ttttcctcggtagttaagaaccgaggttttcctcggcagttaattgcaggcggttttatttttcctcgacagttaactgcagaaaggatattttgg 48815246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 49502816 - 49502870
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagtt 250  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  49502816 ttttcctcggtagttaactgccgaagttttcctcggtagttaactgcagccagtt 49502870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 273
Target Start/End: Original strand, 5845495 - 5845559
Alignment:
Q  209 ttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaact 273  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||||||| |||| | |||||||    
T  5845495 ttaattgccgaggttttcctcggtagttaactgcagccggttttatttttcctcggcagttaact 5845559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 261
Target Start/End: Original strand, 47586237 - 47586296
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttct 261  Q
    |||| ||||||||||||||||||| |||||||||||||||||| |  |||||||||||||    
T  47586237 tcggcagttaactgccgaggtttttctcggtagttaactgcagtcgattttattttttct 47586296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 258
Target Start/End: Complemental strand, 23603572 - 23603510
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttt 258  Q
    |||| ||| ||||||||||||| |||||||||||| ||||||||||||| | |||||||||||    
T  23603572 ttttcctcagtagttaactgccaaggttttcctcgatagttaactgcagtctgttttattttt 23603510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 44336330 - 44336280
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||||| |||||||| |||||||||||||||| ||||||||||||    
T  44336330 catttttctcggcagttaactaccgaggttttcctcggcagttaactgcag 44336280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 260
Target Start/End: Complemental strand, 13147564 - 13147511
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttc 260  Q
    ||||||||| |||||||||||||||||||||||||||| | ||| |||||||||    
T  13147564 agttaactgtcgaggttttcctcggtagttaactgcagtcggttctattttttc 13147511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 254
Target Start/End: Original strand, 47653694 - 47653759
Alignment:
Q  189 gttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttat 254  Q
    ||||||| ||| |||||||||| |||||||| ||||||||||| |||||||||||| | |||||||    
T  47653694 gttttcagtttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggttttat 47653759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 28456529 - 28456481
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||||||    
T  28456529 tttttctcggtagtttactgccgaagttttcctcgatagttaactgcag 28456481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 49875333 - 49875381
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||||||    
T  49875333 tttttctcggtagtttactgccgaagttttcctcgatagttaactgcag 49875381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 585737 - 585682
Alignment:
Q  189 gttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||| ||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  585737 gttttcagtttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 585682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 251
Target Start/End: Complemental strand, 49660902 - 49660847
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttt 251  Q
    |||| |||||||||| |||||||| ||||||||||| |||||||||||| ||||||    
T  49660902 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcagccagttt 49660847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 471090 - 471136
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||    
T  471090 tttttctcggcagttaactcccgaggttttcctcggcagttaactgc 471136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 3941149 - 3941199
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttt 251  Q
    ||||| |||||||| |||| |||||||||||||||||||||||| ||||||    
T  3941149 ctcggcagttaactaccgaagttttcctcggtagttaactgcagccagttt 3941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 19161973 - 19161923
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||| ||||| |||||||| |||||||||||||||| ||||||||||||    
T  19161973 cattttcctcggcagttaactcccgaggttttcctcggcagttaactgcag 19161923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 23603590 - 23603552
Alignment:
Q  204 ggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  23603590 ggtagttaactgccgaggttttcctcagtagttaactgc 23603552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 26606872 - 26606822
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttt 251  Q
    ||||| ||||||||||||| ||||||||||||||||||||| || ||||||    
T  26606872 ctcggcagttaactgccgaagttttcctcggtagttaactgtagtcagttt 26606822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 18609894 - 18609935
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  18609894 ctcggcagttaactgccgaagttttcctcggtagttaactgc 18609935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 22524204 - 22524159
Alignment:
Q  197 ttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||    
T  22524204 ttttctcggcagttaactaccgaggttttcctcgggagttaactgc 22524159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 586599 - 586647
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  586599 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 586647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 4883312 - 4883264
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  4883312 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 4883264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 5844745 - 5844693
Alignment:
Q  206 tagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttt 258  Q
    ||||||||||||||||||||| |||||| |||||||||| |  ||||||||||    
T  5844745 tagttaactgccgaggttttcttcggtaattaactgcagtcgattttattttt 5844693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 6557994 - 6557946
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||| |||||||| ||||| |||||||||| ||||||||||||    
T  6557994 tttttctcggcagttaactaccgagattttcctcggcagttaactgcag 6557946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 9618797 - 9618749
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||| |||||||| ||||||||||||||||||||||||    
T  9618797 ttttcctcgggagtttactgccgaagttttcctcggtagttaactgcag 9618749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 18609170 - 18609122
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  18609170 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 18609122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 23359343 - 23359391
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||| ||| |||||||||||||||||||||||||||||    
T  23359343 ttttcctcggcagtttactaccgaggttttcctcggtagttaactgcag 23359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 26769242 - 26769194
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| |||||||| |||||||||||||||    
T  26769242 ttttcctcggtagtttactgccgaagttttcctgggtagttaactgcag 26769194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 27649332 - 27649284
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||| ||| ||||||||||||||||||||||||    
T  27649332 ttttcctcggtagtttactgtcgaagttttcctcggtagttaactgcag 27649284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 30195381 - 30195429
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  30195381 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 30195429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 37992544 - 37992592
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  37992544 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 37992592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 44470005 - 44470053
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||||||    
T  44470005 ttttcctcggcagttaactcccgaggttttcctcggcagttaactgcag 44470053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 46909572 - 46909620
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| |||||||||| |||||||||||||    
T  46909572 ttttcctcggtagtttactgccgaagttttcctcgatagttaactgcag 46909620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 13636121 - 13636164
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  13636121 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 13636164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 29424454 - 29424411
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||    
T  29424454 ctcggcagttaactaccgaagttttcctcggtagttaactgcag 29424411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 36072447 - 36072400
Alignment:
Q  197 ttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||| |||||||| |||||||||||||||| ||||||||||||    
T  36072447 ttttttcggcagttaactaccgaggttttcctcggcagttaactgcag 36072400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 242
Target Start/End: Complemental strand, 42572795 - 42572760
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||||||| ||||||||||||||||||||||||||    
T  42572795 agttaactgtcgaggttttcctcggtagttaactgc 42572760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 46217317 - 46217360
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||    
T  46217317 ctcggcagttaactaccgaagttttcctcggtagttaactgcag 46217360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 244
Target Start/End: Complemental strand, 46341714 - 46341679
Alignment:
Q  209 ttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||| ||||||||||||||||||||||||    
T  46341714 ttaactgccgaagttttcctcggtagttaactgcag 46341679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 47652774 - 47652727
Alignment:
Q  195 atttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| ||||| ||||||||||||| ||||||||||| ||||||||||    
T  47652774 attttcctcgggagttaactgccgaagttttcctcggcagttaactgc 47652727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 242
Target Start/End: Original strand, 49395638 - 49395673
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||||||||| ||||||||||||||||||||||||    
T  49395638 agttaactgcctaggttttcctcggtagttaactgc 49395673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 6562867 - 6562909
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||||||| |||||||||| |||||||||||||||||    
T  6562867 tcggcagttaactgtcgaggttttcttcggtagttaactgcag 6562909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 16270025 - 16270067
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||||||||||||| |||| ||||||||||||    
T  16270025 tcggcagttaactgccgaggttttcttcggcagttaactgcag 16270067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 19054246 - 19054292
Alignment:
Q  198 tttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| |||||||| ||||||||||||| || ||||||||||||    
T  19054246 tttctcggcagttaactaccgaggttttccttggcagttaactgcag 19054292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 29425335 - 29425377
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    ||||| |||||||| |||| |||||||||||||||||||||||    
T  29425335 ctcggcagttaactaccgaagttttcctcggtagttaactgca 29425377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 29438020 - 29438062
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||| | |||||||||||||||||||||||||||||    
T  29438020 tcggcagttaattaccgaggttttcctcggtagttaactgcag 29438062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 243
Target Start/End: Complemental strand, 39895061 - 39895027
Alignment:
Q  209 ttaactgccgaggttttcctcggtagttaactgca 243  Q
    ||||||||||| |||||||||||||||||||||||    
T  39895061 ttaactgccgaagttttcctcggtagttaactgca 39895027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 44598898 - 44598948
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||| ||||| |||||||| |||| ||||||||||| ||||||||||||    
T  44598898 cattttcctcggcagttaactcccgaagttttcctcggcagttaactgcag 44598948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 244
Target Start/End: Original strand, 51291590 - 51291628
Alignment:
Q  206 tagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| ||||||||||||||||||||||||    
T  51291590 tagtttactgccgaagttttcctcggtagttaactgcag 51291628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Complemental strand, 52802203 - 52802161
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||| |||||||||||||||| ||||||||||||    
T  52802203 tcggcagttaactaccgaggttttcctcggcagttaactgcag 52802161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 3728809 - 3728768
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  3728809 ctcggcagttaactaccgaggttttcctcggcagttaactgc 3728768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 3944048 - 3944007
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  3944048 ctcggcagttaactaccgaggttttcctcggcagttaactgc 3944007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 3993842 - 3993883
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  3993842 ctcggcagttaactaccgaggttttcctcggcagttaactgc 3993883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 8548668 - 8548709
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  8548668 ctcggcagttaactaccgaggttttcctcggcagttaactgc 8548709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 9711650 - 9711691
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  9711650 ctcggcagttaactcccgaggttttcctcggcagttaactgc 9711691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 11183254 - 11183217
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  11183254 agttaactaccgaggttttcctcggcagttaactgcag 11183217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 244
Target Start/End: Complemental strand, 13173911 - 13173866
Alignment:
Q  199 ttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||| ||||||||||| |||||||||||||  |||||||||||    
T  13173911 ttctcggcagttaactgccaaggttttcctcggctgttaactgcag 13173866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 18609229 - 18609184
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactg 241  Q
    |||| |||||||||| |||||||| ||||||||||| |||||||||    
T  18609229 ttttcctcggtagtttactgccgaagttttcctcggcagttaactg 18609184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 24362362 - 24362325
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaac 239  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  24362362 tcggcagttaactgccgaggtttacctcggtagttaac 24362325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 24364725 - 24364766
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    |||| ||||||||| ||||||||||||| |||||||||||||    
T  24364725 tcggcagttaactgtcgaggttttcctcagtagttaactgca 24364766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 26633600 - 26633559
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    |||| |||||||| |||||||||||||||| |||||||||||    
T  26633600 tcggcagttaactaccgaggttttcctcggcagttaactgca 26633559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 37991658 - 37991613
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactg 241  Q
    |||| |||||||||| |||||||| ||||||||||| |||||||||    
T  37991658 ttttcctcggtagtttactgccgaagttttcctcggcagttaactg 37991613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 38771703 - 38771662
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  38771703 ctcggcagttaactcccgaggttttcctcggcagttaactgc 38771662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Original strand, 41804038 - 41804075
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  41804038 agttaactaccgaggttttcctcggcagttaactgcag 41804075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 49502795 - 49502836
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||||| || ||||||||||||||||||||||    
T  49502795 ctcggcagttaactgctgaagttttcctcggtagttaactgc 49502836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 9710657 - 9710609
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||||||| |||| ||||||||||| ||||||||||||    
T  9710657 ttttcctcggcagttaactcccgaagttttcctcggcagttaactgcag 9710609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 13178126 - 13178174
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||| ||||||||  ||||||||||||| | ||||||||||||    
T  13178126 tttttctcggcagttaactctcgaggttttcctcagcagttaactgcag 13178174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 21700840 - 21700888
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||| | ||||||||||| ||||||||||||    
T  21700840 ttttcctcggtagtttactgccaaagttttcctcggcagttaactgcag 21700888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 27115821 - 27115865
Alignment:
Q  200 tctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||||||||| ||| |||||| |||| ||||||||||||    
T  27115821 tctcggtagttaactgacgaagttttcttcggcagttaactgcag 27115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 30194492 - 30194452
Alignment:
Q  204 ggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||| |||||||| ||||||||||| ||||||||||||    
T  30194492 ggtagtttactgccgaagttttcctcggcagttaactgcag 30194452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 31945853 - 31945901
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||| ||||| |||||||| ||||||  |||||||||||||||||||    
T  31945853 cattttcctcggcagttaactaccgaggaattcctcggtagttaactgc 31945901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 38119616 - 38119672
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcg 263  Q
    |||||||| |||||||||||||||| |||||||||| |  ||||| |||||| ||||    
T  38119616 agttaactaccgaggttttcctcggcagttaactgccgctagtttcatttttcctcg 38119672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 38690010 - 38689962
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||||||| ||||||||||||| || ||||||||||||    
T  38690010 ttttcctcggcagttaactaccgaggttttccttggcagttaactgcag 38689962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 39896553 - 39896601
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||||| | |||||| |||||| || ||||||||||||||    
T  39896553 tttttctcggtagtttattgccgaagttttcatcagtagttaactgcag 39896601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 50683846 - 50683890
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaact 240  Q
    ||||||||||||||| ||||||||  |||||| ||||||||||||    
T  50683846 tttttctcggtagtttactgccgaaattttccacggtagttaact 50683890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 17597026 - 17596923
Alignment:
Q  190 ttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgtagatggggtatttt 289  Q
    ||||| |||| ||| |||||||||||||||| |||||||||| |||||||||||| | ||||||||||| |||||| |||||||| ||| ||||||||||    
T  17597026 ttttcgttttcctctgtagttaactgccgagattttcctcggcagttaactgcagccggttttatttttcctcgacagttaactgcagagggggtatttt 17596927  T
Q  290 ggta 293  Q
    ||||    
T  17596926 ggta 17596923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 31496313 - 31496236
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaact 273  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||| |||||| |||||||    
T  31496313 ttttcctcggtagttaactgccgaggttttcctcggtagataactgcagccggttttatttttcctcgacagttaact 31496236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 31501699 - 31501622
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaact 273  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||| | |||||| |||| |||||| |||||||    
T  31501699 ttttcctcggtagttaactgccgaggttttcctcggtagataactgcagccggttttaattttcctcgacagttaact 31501622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 3380849 - 3380782
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcg 263  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| | || |||||||||| ||||    
T  3380849 tttttctcggtagttaactgtcgaggttttcctcggtagttaactgccgtcaattttatttttcctcg 3380782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 31480441 - 31480364
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaact 273  Q
    |||| |||||||||||||| ||||||||||||| ||||| |||||||||   ||||||||||| |||||| |||||||    
T  31480441 ttttcctcggtagttaactcccgaggttttcctgggtagataactgcagctggttttatttttcctcgacagttaact 31480364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 293
Target Start/End: Original strand, 26184613 - 26184696
Alignment:
Q  209 ttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgtagatggggtattttggta 293  Q
    ||||||| ||| |||||| ||||||||||||||||| | ||||||||||| |||||| |||||||| | | ||||||||||||||    
T  26184613 ttaactgtcgatgttttcatcggtagttaactgcagccggttttatttttcctcgacagttaactgca-aaggggtattttggta 26184696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 31791596 - 31791523
Alignment:
Q  167 gaagaagatgatgatga----tctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagtt 236  Q
    |||||||||||||||||    ||| ||||||||||||| |||||||||||||||||| ||||| ||||||||||    
T  31791596 gaagaagatgatgatgaaaattctaggttttcatttttttcggtagttaactgccgaagttttactcggtagtt 31791523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 14012357 - 14012414
Alignment:
Q  184 tctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactg 241  Q
    ||||| ||||| |||| ||||||||||||||||||| ||||||||||| |||||||||    
T  14012357 tctggattttcgttttcctcggtagttaactgccgatgttttcctcggcagttaactg 14012414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 31516201 - 31516132
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgac 265  Q
    ||||||||| |||||||||||||||||||||||||  ||||||||| |  | ||||||||||| ||||||    
T  31516201 tttttctcgatagttaactgccgaggttttcctcgaaagttaactgtaaccggttttatttttcctcgac 31516132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 273
Target Start/End: Original strand, 31516890 - 31516961
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaact 273  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    |||||||||| |||| | |||||||    
T  31516890 tcggtagttaactgccgaagttttcctcgggagttaactgcagctgcttttatttttcctcggcagttaact 31516961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 14011796 - 14011754
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaa 238  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  14011796 ttttcctcggtagttaactgccgaggttttcctcggcagttaa 14011754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 17337722 - 17337673
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagtt 250  Q
    ||||| |||| |||||||| |||||||||||||||||||||||| |||||    
T  17337722 ctcgggagtttactgccgaagttttcctcggtagttaactgcagccagtt 17337673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 17597491 - 17597564
Alignment:
Q  170 gaagatgatgatgat-ctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||||||||| || |||| ||||| |||| ||||| |||||||| |||| ||||||||||| ||||||||||    
T  17597491 gaagatgatgataattctggattttcgttttcctcggcagttaactcccgaagttttcctcggcagttaactgc 17597564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 13164254 - 13164302
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  13164254 ttttcctcggtagtttactgccgaagttttcctcgggagttaactgcag 13164302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 15545806 - 15545758
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| |||||| |||||||| ||||||||| ||||||||||||||    
T  15545806 tttttctcagtagtttactgccgaagttttcctcagtagttaactgcag 15545758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 23958969 - 23958921
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||| |||||||| |||||||||||||||| | ||||||||||    
T  23958969 tttttctcggcagttaactaccgaggttttcctcggcatttaactgcag 23958921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 26712223 - 26712263
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  26712223 tcggtagttaactaccgaggttttcctcggcagttaactgc 26712263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 28249966 - 28249918
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  28249966 cattttcctcggcagttaactaccgaggttttcctcggcagttaactgc 28249918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 32691266 - 32691218
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||| |||||||||||| ||||||||||||||||||  |||||||||    
T  32691266 cattttcctcggtagttaattgccgaggttttcctcggctgttaactgc 32691218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 6204901 - 6204858
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  6204901 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 6204858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 9048149 - 9048106
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||    
T  9048149 ctcggcagttaactaccgaagttttcctcggtagttaactgcag 9048106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 9049083 - 9049126
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||    
T  9049083 ctcggcagttaactaccgaagttttcctcggtagttaactgcag 9049126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 11691868 - 11691825
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  11691868 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 11691825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 22305182 - 22305139
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  22305182 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 22305139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 274
Target Start/End: Complemental strand, 33052604 - 33052538
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactg 274  Q
    ||||||||| |||| |||| |||||||||||||||||| | |||||| |||| |||||| ||||||||    
T  33052604 agttaactgtcgagatttttctcggtagttaactgcagacggtttta-ttttcctcgacagttaactg 33052538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 13382708 - 13382662
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  13382708 ttttcctcggcagttaactaccgaggttttcctcggcagttaactgc 13382662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 13388700 - 13388750
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||| ||||| |||||||| |||||||||||||||  ||||||||||||    
T  13388700 cattttcctcggcagttaactaccgaggttttcctcgacagttaactgcag 13388750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 17338760 - 17338806
Alignment:
Q  198 tttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| |||||| |||||| ||||||||||| ||||||||||||    
T  17338760 tttctcggcagttaattgccgaagttttcctcggcagttaactgcag 17338806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 18606121 - 18606075
Alignment:
Q  198 tttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| |||||| | |||||||||||||||| ||||||||||||    
T  18606121 tttctcggcagttaagtaccgaggttttcctcggcagttaactgcag 18606075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 26351090 - 26351136
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  26351090 ttttcctcggcagttaactcccgaggttttcctcggcagttaactgc 26351136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 26712127 - 26712081
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  26712127 ttttcctcggcagttaactaccgaggttttcctcggcagttaactgc 26712081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 31792033 - 31792126
Alignment:
Q  184 tctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgtaga 278  Q
    |||| ||||| |||||||||| ||||||||||||||||||||  |||||| |||| ||||| |  |||| |  ||| ||||| ||||||||||||    
T  31792033 tctgagtttttatttttctcgatagttaactgccgaggtttt-ttcggtaattaattgcagtcgattttctactttttcgacagttaactgtaga 31792126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 2110449 - 2110497
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||| | ||||||||||||    
T  2110449 ttttcctcggtagtttactgccgaagttttcctcagcagttaactgcag 2110497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 18351643 - 18351683
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||| |||||||| |||||||||||||||| ||||||||||    
T  18351643 tcggcagttaactaccgaggttttcctcggcagttaactgc 18351683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 32555583 - 32555643
Alignment:
Q  197 ttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttatttt 257  Q
    |||||||||||||||||| |||||||||||||  ||| |||||| ||| | ||||| ||||    
T  32555583 ttttctcggtagttaactaccgaggttttccttagtaattaactacagtcggttttgtttt 32555643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 188 - 263
Target Start/End: Original strand, 48578142 - 48578217
Alignment:
Q  188 ggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcg 263  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||| | ||||||||||||||||    
T  48578142 ggttttcatttttcttggtagttaactgctgaggttttcttcggtagttaactgcagccggttttattttttctcg 48578217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 197 - 244
Target Start/End: Original strand, 37022056 - 37022103
Alignment:
Q  197 ttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37022056 ttttctcggcagttaactgccgaggttttcctcggtagttaactgcag 37022103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 33410229 - 33410320
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttatttttt-ctcgaccgttaactgtagatggggtattttggta 293  Q
    |||| ||||||||||||||||||||||||| |||||||||||| |  ||||||||||| |||||  ||||| ||| || ||||||||||||||    
T  33410229 tcggcagttaactgccgaggttttcctcgggagttaactgcagccgattttattttttcctcgatagttaattgtcga-ggggtattttggta 33410320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 258
Target Start/End: Complemental strand, 14297213 - 14297162
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcaggcagttttattttt 258  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  14297213 agttaactgcggaggttttcctcggtagttaactgcagccagtttcattttt 14297162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 258
Target Start/End: Complemental strand, 14315462 - 14315411
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcaggcagttttattttt 258  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  14315462 agttaactgcggaggttttcctcggtagttaactgcagccagtttcattttt 14315411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 265
Target Start/End: Complemental strand, 33409596 - 33409533
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgac 265  Q
    |||| ||||||||||||||||||||||||| |||||||||||| |  |||||||||| ||||||    
T  33409596 tcggcagttaactgccgaggttttcctcgggagttaactgcagccgattttatttttcctcgac 33409533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 1736085 - 1736133
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  1736085 ttttactcggtagtttactgccgaagttttcctcggtagttaactgcag 1736133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 12376064 - 12376016
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  12376064 ttttcctcggtagtttactgccgaagttttcctcggtagttaactgcag 12376016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 36480534 - 36480582
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||||||    
T  36480534 ttttcctcggtagttaactaccgaagttttcctcggtagttaactgcag 36480582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 38368314 - 38368259
Alignment:
Q  189 gttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||| |||||||||||||| ||| |||| ||||||||||| ||||||||||||    
T  38368314 gttttcagttttctcggtagtttactaccgaagttttcctcggcagttaactgcag 38368259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 43176627 - 43176670
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||    
T  43176627 ctcggtagttaactgccgaagttttcctcggcagttaactgcag 43176670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 244
Target Start/End: Complemental strand, 26791722 - 26791680
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  26791722 tcggcagttaactgccgaggtttttctcggtagttaactgcag 26791680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 56565836 - 56565790
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||| |||||||||||||| |||||||||||||||| ||||||||||    
T  56565836 ttttcctcggtagttaactcccgaggttttcctcggcagttaactgc 56565790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 244
Target Start/End: Complemental strand, 10729475 - 10729434
Alignment:
Q  203 cggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||||||||||||||    
T  10729475 cggtacttaactgctgaggttttcctcggtagttaactgcag 10729434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 244
Target Start/End: Complemental strand, 10943244 - 10943203
Alignment:
Q  203 cggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||||||||||||||    
T  10943244 cggtacttaactgctgaggttttcctcggtagttaactgcag 10943203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 11084006 - 11084047
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| ||||||||||||||||||||||||| ||||||||||    
T  11084006 ctcggcagttaactgccgaggttttcctcgggagttaactgc 11084047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 40334518 - 40334465
Alignment:
Q  228 tcggtagttaactgcaggcagttttattttttctcgaccgttaactgtagatgg 281  Q
    ||||||||||||||||| | ||||||||||| |||||| ||||||||| |||||    
T  40334518 tcggtagttaactgcagccggttttatttttcctcgacagttaactgtcgatgg 40334465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 41933622 - 41933683
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcg 263  Q
    |||| |||||||| |||||||||| |||||||||||||||||| | |||| |||||| ||||    
T  41933622 tcggcagttaactaccgaggtttttctcggtagttaactgcagccggtttcatttttcctcg 41933683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 46169194 - 46169243
Alignment:
Q  195 atttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  46169194 attttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 46169243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 9655903 - 9655951
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||| |||||||| ||||||||||||||||||||||||    
T  9655903 ttttcctcggcagtttactgccgaagttttcctcggtagttaactgcag 9655951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 14200640 - 14200592
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  14200640 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 14200592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 14201524 - 14201572
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  14201524 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 14201572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 15995801 - 15995753
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||||||    
T  15995801 ttttcctcggcagttaactaccgaggttttcctcggcagttaactgcag 15995753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 19069266 - 19069218
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||||||    
T  19069266 ttttcctcggcagttaactaccgaggttttcctcggcagttaactgcag 19069218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 40240367 - 40240415
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||| ||||||||||||||    
T  40240367 ttttcctcggtagtttactgccgaagttttcctcagtagttaactgcag 40240415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 40240704 - 40240752
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||||| |||| ||| ||||||||| ||||||||||||||    
T  40240704 tttttctcggtagtttactgtcgaagttttcctcagtagttaactgcag 40240752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 40833604 - 40833652
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  40833604 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 40833652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 46253562 - 46253514
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  46253562 ttttcctcggtagttcactgccgaagttttcctcggcagttaactgcag 46253514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 46254442 - 46254490
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  46254442 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 46254490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 6178109 - 6178152
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  6178109 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 6178152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 9655270 - 9655223
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    ||||||||| ||||| |||||||| ||||| |||||||||||||||||    
T  9655270 tttttctcgatagtttactgccgaagtttttctcggtagttaactgca 9655223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 9890068 - 9890025
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  9890068 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 9890025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 17342220 - 17342173
Alignment:
Q  197 ttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||| |||||||| |||| ||||| ||||||||||||||||||    
T  17342220 ttttctcggcagttaactaccgaagtttttctcggtagttaactgcag 17342173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 21022887 - 21022930
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  21022887 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 21022930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 23221657 - 23221712
Alignment:
Q  189 gttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||| ||| |||||||||| ||| |||| ||||||||||| ||||||||||||    
T  23221657 gttttcagtttcctcggtagtttactaccgaagttttcctcggcagttaactgcag 23221712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 32537591 - 32537544
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    |||| |||||||||| |||||||| |||||||||| ||||||||||||    
T  32537591 ttttcctcggtagtttactgccgaagttttcctcgatagttaactgca 32537544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 44561329 - 44561372
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| ||||| |||||||||||||||||||||||    
T  44561329 ctcggcagttaactaccgagattttcctcggtagttaactgcag 44561372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 49094158 - 49094115
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  49094158 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 49094115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 55793994 - 55793951
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  55793994 ctcggcagttaactcccgaggttttcctcggcagttaactgcag 55793951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 240
Target Start/End: Complemental strand, 56565857 - 56565818
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaact 240  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  56565857 ctcggtagttaactgcagaagttttcctcggtagttaact 56565818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 958593 - 958635
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    ||||| |||||||| |||||||||||||||| |||||||||||    
T  958593 ctcggcagttaactaccgaggttttcctcggcagttaactgca 958635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Complemental strand, 11494616 - 11494574
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||| |||||||||||||||| ||||||||||||    
T  11494616 tcggcagttaactaccgaggttttcctcggcagttaactgcag 11494574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 21018004 - 21018046
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||||||||||||||||||||||| |||||| |||||    
T  21018004 tcggcagttaactgccgaggttttcctcggcagttaattgcag 21018046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 21470980 - 21470926
Alignment:
Q  198 tttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagtttt 252  Q
    |||||||| |||||||| |||||||||||||| |  ||||||||||| |||||||    
T  21470980 tttctcggcagttaactaccgaggttttcctctgcggttaactgcagtcagtttt 21470926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 28157657 - 28157615
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaa 238  Q
    |||| |||||||||| |||||||| ||||||||||||||||||    
T  28157657 ttttcctcggtagtttactgccgaagttttcctcggtagttaa 28157615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 28234495 - 28234449
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||||||| |||||||| |||||||||||||||| | ||||||||    
T  28234495 tttttctcggcagttaactaccgaggttttcctcggcatttaactgc 28234449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 29307489 - 29307535
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||    
T  29307489 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgc 29307535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Complemental strand, 33383878 - 33383836
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||| |||||||||||||||| ||||||||||||    
T  33383878 tcggcagttaacttccgaggttttcctcggcagttaactgcag 33383836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 37563274 - 37563320
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  37563274 ttttcctcggcagttaactaccgaggttttcctcggcagttaactgc 37563320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 39590568 - 39590610
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||| |||||||||||||||| ||||||||||||    
T  39590568 tcggcagttaactaccgaggttttcctcggcagttaactgcag 39590610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 39773483 - 39773437
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  39773483 ttttcctcggcagttaactaccgaggttttcctcggcagttaactgc 39773437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 275
Target Start/End: Complemental strand, 51686719 - 51686653
Alignment:
Q  209 ttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgt 275  Q
    |||||||| ||||||||| |||| |||||||||  | | |||||||||||||||||  |||||||||    
T  51686719 ttaactgcagaggttttcatcggcagttaactgtcgtcggttttattttttctcgatagttaactgt 51686653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 54634009 - 54634055
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  54634009 ttttcctcggcagttaactaccgaggttttcctcggcagttaactgc 54634055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 55704738 - 55704796
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttat 254  Q
    |||| |||||||||| ||||||||  ||| ||||||||||||||||||| | |||||||    
T  55704738 ttttcctcggtagtttactgccgaaatttacctcggtagttaactgcagtcggttttat 55704796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 4783719 - 4783678
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    |||| ||||||||||||| ||||||||||| |||||||||||    
T  4783719 tcggcagttaactgccgaagttttcctcggcagttaactgca 4783678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 4786334 - 4786391
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttatttttt 259  Q
    |||| |||||||  |||||||||||||| |||||||||||||||  ||| ||||||||    
T  4786334 tcggcagttaacaaccgaggttttcctcagtagttaactgcaggtggttctatttttt 4786391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 20208578 - 20208541
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  20208578 agttaactaccgaggttttcctcggcagttaactgcag 20208541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 21538491 - 21538544
Alignment:
Q  204 ggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttatttt 257  Q
    ||||||||||||| || ||||||||| |||||||||||||| | ||| ||||||    
T  21538491 ggtagttaactgctgaagttttcctcagtagttaactgcagtcggttatatttt 21538544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 30726740 - 30726781
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  30726740 ctcggcagttaactaccgaggttttcctcggcagttaactgc 30726781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 31425317 - 31425358
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  31425317 ctcggcagttaactaccgaggttttcctcggcagttaactgc 31425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 37563139 - 37563102
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaa 238  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  37563139 ctcggtagttaactaccgaggttttcctcggcagttaa 37563102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 40358279 - 40358320
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  40358279 ctcggcagttaactaccgaggttttcctcggcagttaactgc 40358320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 42528941 - 42528904
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaac 239  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  42528941 tcggcagttaactgccgaagttttcctcggtagttaac 42528904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Complemental strand, 49563918 - 49563873
Alignment:
Q  197 ttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||||||  ||||||| |||||||||||||||| ||||||||||    
T  49563918 ttttctcggccgttaactaccgaggttttcctcggcagttaactgc 49563873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 16984155 - 16984203
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| ||||||||  ||||||||||||||| ||||||||||||    
T  16984155 ttttcctcggcagttaactatcgaggttttcctcggcagttaactgcag 16984203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 23220757 - 23220709
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| |||||| |||| ||||||||||||    
T  23220757 ttttcctcggtagtttactgccgaagttttcatcggcagttaactgcag 23220709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 28322114 - 28322162
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||  |||||||| |||||| |||||||||||||||||    
T  28322114 ttttcctcggtagtatactgccgaagttttcttcggtagttaactgcag 28322162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 38369176 - 38369224
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||| ||| ||||||||||| ||||||||||||    
T  38369176 ttttcctcggtagtttactgtcgaagttttcctcggcagttaactgcag 38369224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 40832722 - 40832674
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||| | ||||||||||||    
T  40832722 ttttcctcggtagtttactgccgaagttttcctcagcagttaactgcag 40832674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 44051086 - 44051134
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||||||| |||||| ||||||||| ||||||||||||    
T  44051086 ttttcctcggcagttaactaccgaggatttcctcgggagttaactgcag 44051134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 49422173 - 49422205
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaac 239  Q
    ||||||||| |||||||||||||||||||||||    
T  49422173 agttaactgtcgaggttttcctcggtagttaac 49422205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 50447087 - 50447039
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||  ||||||||||||    
T  50447087 ttttcctcggtagtttactgccgaagttttcctcgacagttaactgcag 50447039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 51037454 - 51037510
Alignment:
Q  189 gttttcatttttc-tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||| ||||| ||||||||| |||||||| ||||||||||| |||||| |||||    
T  51037454 gttttcagttttcatcggtagtttactgccgaagttttcctcggcagttaattgcag 51037510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 45507391 - 45507468
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaact 273  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||| |  |||||||||| |||| | |||||||    
T  45507391 ttttcctccgtagttaactgccgaggttttcctcggtagttaactgcagccgattttatttttcctcggcagttaact 45507468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 21343488 - 21343536
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  21343488 ttttcctcggtagttaactgccgaagttttcctcggtagttaactgcag 21343536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 34712741 - 34712801
Alignment:
Q  184 tctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||||| | ||| ||||||||||||||||||||||||| ||||||||||||    
T  34712741 tctggattttcattttccgcggcagttaactgccgaggttttcctcgggagttaactgcag 34712801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 6144298 - 6144340
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  6144298 tcggtagttaactgccgaagttttcctcggtagttaactgcag 6144340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 50604420 - 50604462
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  50604420 tcggcagttaactgccgaggttttcctcggtagttaactgcag 50604462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 51326048 - 51325982
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaact 273  Q
    ||||||||| ||||||||| || ||||||||||||||| | ||||||||||| |||||| |||||||    
T  51326048 agttaactgtcgaggtttttcttggtagttaactgcagccggttttatttttcctcgacagttaact 51325982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 2645537 - 2645489
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||| |||||||||||||||||||||||||||||||  |||||||||    
T  2645537 cattttcctcggtagttaactgccgaggttttcctcggctgttaactgc 2645489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 32744146 - 32744194
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  32744146 ttttcctcggtagtttactgccgaagttttcctcggtagttaactgcag 32744194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 34712301 - 34712265
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgca 243  Q
    |||||||||||||||||||||||||||||||||||||    
T  34712301 agttaactgccgaggttttcctcggtagttaactgca 34712265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 2830982 - 2831045
Alignment:
Q  195 atttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttt 258  Q
    ||||||||||| ||||||||| ||||||||| ||| ||||||||||| || | |||||||||||    
T  2830982 atttttctcggcagttaactgtcgaggtttttctcagtagttaactgtagtcggttttattttt 2831045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 19341593 - 19341636
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  19341593 ctcggcagttaactgccgaagttttcctcggtagttaactgcag 19341636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 244
Target Start/End: Original strand, 48250864 - 48250911
Alignment:
Q  197 ttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||    
T  48250864 ttttctcggcagttaactcccgaggttttcctcggcagttaactgcag 48250911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 1294077 - 1294119
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||||||||||||||||||||||| ||||||||||||    
T  1294077 tcggcagttaactgccgaggttttcctcggaagttaactgcag 1294119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 2062463 - 2062409
Alignment:
Q  198 tttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagtttt 252  Q
    |||||||| ||||||||||||| ||||||||||  |||||||||||| |||||||    
T  2062463 tttctcggcagttaactgccgaagttttcctcgacagttaactgcagccagtttt 2062409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 9429841 - 9429891
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||| ||||| |||||||| |||||||||||||||||| ||||||||||    
T  9429841 cattttcctcggcagttaactaccgaggttttcctcggtacttaactgcag 9429891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 14043894 - 14043940
Alignment:
Q  198 tttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||||    
T  14043894 tttctcggcagttaactgccgaagttttcctcggcagttaactgcag 14043940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 8156582 - 8156541
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| ||||||||||||||||||||||||| ||||||||||    
T  8156582 ctcggcagttaactgccgaggttttcctcggcagttaactgc 8156541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 55175739 - 55175690
Alignment:
Q  195 atttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||||| |||||||| |||||||||| |||||||||||||    
T  55175739 attttcctcggtagtttactgccgaagttttcctcgatagttaactgcag 55175690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 2063201 - 2063249
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||| ||| ||||||||||||||||||||||||    
T  2063201 ttttcctcggtagtttactgtcgaagttttcctcggtagttaactgcag 2063249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 2743477 - 2743429
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||||||    
T  2743477 ttttcctcggcagttaactcccgaggttttcctcggcagttaactgcag 2743429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 4002499 - 4002547
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||||||    
T  4002499 ttttcctcggcagttaactcccgaggttttcctcggcagttaactgcag 4002547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 11248633 - 11248585
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  11248633 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 11248585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 11249518 - 11249566
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  11249518 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 11249566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 11269387 - 11269339
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  11269387 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 11269339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 12897903 - 12897855
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  12897903 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 12897855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 19341123 - 19341075
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| ||||||||| ||| ||||||||||||||||||||||||    
T  19341123 ttttcctcggcagttaactgtcgaagttttcctcggtagttaactgcag 19341075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 27739561 - 27739609
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  27739561 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 27739609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 28816995 - 28817043
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  28816995 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 28817043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 34543130 - 34543178
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  34543130 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 34543178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 36812916 - 36812868
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||| ||| |||||||||||||||||||||||||||||    
T  36812916 ttttcctcggcagtttactaccgaggttttcctcggtagttaactgcag 36812868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 40798958 - 40799006
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| | |||||| ||||||||||||||||||||||||    
T  40798958 ttttcctcggtagtttattgccgaagttttcctcggtagttaactgcag 40799006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 2647698 - 2647741
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  2647698 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 2647741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 6143745 - 6143702
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||    
T  6143745 ctcggcagttaactgccgaagttttcctcggcagttaactgcag 6143702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 21343461 - 21343508
Alignment:
Q  195 atttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||||| |||||| | ||||||||||||||||||||||    
T  21343461 attttcctcggtagtttactgccaaagttttcctcggtagttaactgc 21343508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 34049154 - 34049111
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  34049154 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 34049111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 36134397 - 36134354
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  36134397 ctcggcagttaactcccgaggttttcctcggcagttaactgcag 36134354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 41803072 - 41803029
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  41803072 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 41803029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 43476266 - 43476223
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  43476266 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 43476223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 52570565 - 52570608
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||| ||||||||||||||||||    
T  52570565 ctcggcagttaactaccgaggtttttctcggtagttaactgcag 52570608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 54389869 - 54389826
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  54389869 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 54389826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 1293451 - 1293401
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttt 251  Q
    ||||| |||||||| |||||||||||||||| |||||||||| | ||||||    
T  1293451 ctcggcagttaactcccgaggttttcctcggcagttaactgccgccagttt 1293401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 11270280 - 11270326
Alignment:
Q  198 tttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| ||||||||||||| |||||||| || ||||||||||||    
T  11270280 tttctcggcagttaactgccgaagttttccttggcagttaactgcag 11270326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 16484448 - 16484498
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||| ||||| |||||||| |||| ||||||||||| ||||||||||||    
T  16484448 cattttcctcggcagttaactcccgaagttttcctcggcagttaactgcag 16484498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 16852057 - 16852103
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||    
T  16852057 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgc 16852103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Complemental strand, 19440329 - 19440287
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||| |||||||||||||||| ||||||||||||    
T  19440329 tcggcagttaactaccgaggttttcctcggcagttaactgcag 19440287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 27738690 - 27738636
Alignment:
Q  190 ttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||| ||| |||||||||| ||| |||| ||||||||||| ||||||||||||    
T  27738690 ttttcagtttcctcggtagtttactaccgaagttttcctcggcagttaactgcag 27738636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 29918337 - 29918383
Alignment:
Q  198 tttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| ||||||||  ||||||||||||||| ||||||||||||    
T  29918337 tttctcggcagttaactaacgaggttttcctcggcagttaactgcag 29918383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 29967490 - 29967536
Alignment:
Q  198 tttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| ||||||||  ||||||||||||||| ||||||||||||    
T  29967490 tttctcggcagttaactaacgaggttttcctcggcagttaactgcag 29967536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 30839160 - 30839202
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||||||||||||||| || ||||||||||||    
T  30839160 tcggcagttaactgccgaggttttccttgggagttaactgcag 30839202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 30943263 - 30943213
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttt 251  Q
    ||||| |||||||| |||||||||||||||| |||||||||| | ||||||    
T  30943263 ctcggcagttaactaccgaggttttcctcggcagttaactgccgccagttt 30943213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Complemental strand, 34645635 - 34645593
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||||||||||||||||||||||  ||||||||||||    
T  34645635 tcggcagttaactgccgaggttttcctcgagagttaactgcag 34645593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 34691706 - 34691656
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||| ||||| |||||||| |||||||||||||||  ||||||||||||    
T  34691706 cattttcctcggcagttaactaccgaggttttcctcgacagttaactgcag 34691656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 41579724 - 41579766
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||| |||||||||||||||| ||||||||||||    
T  41579724 tcggcagttaactaccgaggttttcctcggcagttaactgcag 41579766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 41844358 - 41844404
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  41844358 ttttcctcggcagttaactaccgaggttttcctcggcagttaactgc 41844404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 43478822 - 43478872
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||| ||||| |||||||| |||| ||||||||||| ||||||||||||    
T  43478822 cattttcctcggcagttaactaccgaagttttcctcggcagttaactgcag 43478872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 55176347 - 55176389
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||    
T  55176347 ctcggcagttaactgccgaagttttcctcgatagttaactgca 55176389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 3953214 - 3953255
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  3953214 ctcggcagttaactcccgaggttttcctcggcagttaactgc 3953255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 11094191 - 11094142
Alignment:
Q  195 atttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| ||| |||||| |||||||| ||||||||||| ||||||||||||    
T  11094191 attttcctccgtagtttactgccgaagttttcctcggcagttaactgcag 11094142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 24700802 - 24700753
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    |||||| ||||| |||||||| |||||| ||||||||| |||||||||||    
T  24700802 cattttcctcggcagttaactaccgaggatttcctcgggagttaactgca 24700753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 26246254 - 26246299
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactg 241  Q
    ||||||||||||||| |||| ||| ||||||||||| |||||||||    
T  26246254 tttttctcggtagtttactgtcgaagttttcctcggcagttaactg 26246299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 34051312 - 34051353
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||||||||||| |||||||||||||||| | ||||||||    
T  34051312 ctcggtagttaactaccgaggttttcctcggcacttaactgc 34051353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 35743581 - 35743622
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  35743581 ctcggcagttaactaccgaggttttcctcggcagttaactgc 35743622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 40877772 - 40877813
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| ||||||||||||| |||||||||||||||| |||||    
T  40877772 ctcggcagttaactgccgaagttttcctcggtagtttactgc 40877813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 41844223 - 41844182
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||||||||||| |||||||||||||| | ||||||||||    
T  41844223 ctcggtagttaactaccgaggttttcctcagcagttaactgc 41844182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 46697785 - 46697744
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  46697785 ctcggcagttaactaccgaggttttcctcggcagttaactgc 46697744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 46989615 - 46989578
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  46989615 agttaactaccgaggttttcctcggcagttaactgcag 46989578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 50477254 - 50477213
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  50477254 ctcggcagttaactaccgaggttttcctcggcagttaactgc 50477213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 55385205 - 55385168
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  55385205 agttaactaccgaggttttcctcggcagttaactgcag 55385168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 4015123 - 4015167
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaact 240  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||    
T  4015123 ttttcctcggcagttaacttccgaggttttcctcggcagttaact 4015167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 6489408 - 6489360
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||||||| |||||| ||||||||| ||||||||||||    
T  6489408 ttttcctcggcagttaactaccgaggatttcctcggcagttaactgcag 6489360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 10492106 - 10492058
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||  ||||||||||||    
T  10492106 ttttcctcggtagtttactgccgaagttttcctcgtcagttaactgcag 10492058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 11095089 - 11095129
Alignment:
Q  204 ggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||| |||||||| ||||||||||| ||||||||||||    
T  11095089 ggtagtttactgccgaagttttcctcggcagttaactgcag 11095129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 13896876 - 13896924
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcaggcagtt 250  Q
    |||| |||||||| |||||||||||||||  |||||||||||| |||||    
T  13896876 tcggcagttaactaccgaggttttcctcgacagttaactgcagccagtt 13896924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 14042999 - 14042951
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||| |||||| |||||||| |||||||||| |||||||||||||    
T  14042999 ttttcctcagtagtttactgccgaagttttcctcgatagttaactgcag 14042951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 19843398 - 19843442
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaact 240  Q
    |||| |||| ||||| |||||||| ||||||||||||||||||||    
T  19843398 ttttcctcgatagtttactgccgaagttttcctcggtagttaact 19843442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 19988627 - 19988675
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||| | ||||||||||||    
T  19988627 ttttcctcggtagtttactgccgaagttttcctcagcagttaactgcag 19988675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 20918010 - 20918050
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactg 241  Q
    ||||| |||||||| |||||||||||||||| |||||||||    
T  20918010 ctcggcagttaactaccgaggttttcctcggcagttaactg 20918050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 20926972 - 20927012
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactg 241  Q
    ||||| |||||||| |||||||||||||||| |||||||||    
T  20926972 ctcggcagttaactaccgaggttttcctcggcagttaactg 20927012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 34542232 - 34542184
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| ||||||||  |||||||||| ||||||||||||    
T  34542232 ttttcctcggtagtttactgccgaacttttcctcggcagttaactgcag 34542184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 34648214 - 34648246
Alignment:
Q  212 actgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  34648214 actgccgaggttttcctcggtcgttaactgcag 34648246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 40872150 - 40872102
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||| ||||| ||||||||  |||||||||||||||||||||||    
T  40872150 ttttcctcgatagtttactgccgaatttttcctcggtagttaactgcag 40872102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 47443573 - 47443529
Alignment:
Q  197 ttttctcggtagttaactgccgaggttttcctcggtagttaactg 241  Q
    ||||||||| ||||||||||||| ||||||||||  |||||||||    
T  47443573 ttttctcggcagttaactgccgaagttttcctcgaaagttaactg 47443529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 48246491 - 48246443
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||||||| |||||||||||||||  ||||||||||||    
T  48246491 ttttcctcggcagttaactaccgaggttttcctcgacagttaactgcag 48246443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 48566421 - 48566377
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaact 240  Q
    |||| ||||| |||||||| |||| ||||||||||||||||||||    
T  48566421 ttttcctcggcagttaactaccgaagttttcctcggtagttaact 48566377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 51693957 - 51693921
Alignment:
Q  193 tcatttttctcggtagttaactgccgaggttttcctc 229  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  51693957 tcatttttctcggcagttaactgccgacgttttcctc 51693921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 30755666 - 30755759
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactgtagatggggtatttt 289  Q
    |||| ||||||||||||| || |||||||||||||| |||||||||||  | ||||||||||| |||| | |||||||| ||| | ||||||||    
T  30755666 ttttactcggtagttaacagctgaggttttcctcggcagttaactgcaaccggttttatttttcctcggcagttaactgcagaagaggtatttt 30755759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 38330589 - 38330538
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcaggcagtttta 253  Q
    |||||||||||||||||||||||||||| |||||||||||||| | ||||||    
T  38330589 tcggtagttaactgccgaggttttcctcagtagttaactgcagccggtttta 38330538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 41855445 - 41855399
Alignment:
Q  198 tttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  41855445 tttctcggtagttaactaccgaggttttcctcggcagttaactgcag 41855399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 28694169 - 28694100
Alignment:
Q  184 tctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcaggcagtttta 253  Q
    |||| ||||||||||| || | |||||||||| ||||||||||||||| |||||||||||| | ||||||    
T  28694169 tctgagttttcattttcctggctagttaactggcgaggttttcctcggcagttaactgcagccggtttta 28694100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 25994525 - 25994477
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  25994525 tttttctcggtagtttactgccgaagttttcctcagtagttaactgcag 25994477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 28646245 - 28646289
Alignment:
Q  200 tctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||    
T  28646245 tctcggtagttaactgccgaagttttcctcggcagttaactgcag 28646289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 28650829 - 28650873
Alignment:
Q  200 tctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||    
T  28650829 tctcggtagttaactgccgaagttttcctcggcagttaactgcag 28650873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 12206815 - 12206756
Alignment:
Q  184 tctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||   ||||||||||    
T  12206815 tctgagttttcattttcttcggtagttaactgccgaggttttcctcgacggttaactgca 12206756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 12451243 - 12451184
Alignment:
Q  184 tctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||   ||||||||||    
T  12451243 tctgagttttcattttcttcggtagttaactgccgaggttttcctcgacggttaactgca 12451184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 7168165 - 7168119
Alignment:
Q  198 tttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||||| |||| |||||||||||||||| ||||||||||||    
T  7168165 tttctcggtagtcaactaccgaggttttcctcggcagttaactgcag 7168119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 22550857 - 22550907
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||| ||||| |||||||| |||||||||||||||| ||||||||||||    
T  22550857 cattttcctcggcagttaactaccgaggttttcctcggcagttaactgcag 22550907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 32383205 - 32383247
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  32383205 tcggcagttaactaccgaggttttcctcggtagttaactgcag 32383247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 32437160 - 32437202
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  32437160 tcggcagttaactaccgaggttttcctcggtagttaactgcag 32437202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 244
Target Start/End: Complemental strand, 40039199 - 40039157
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  40039199 tcggcagttaacttccgaggttttcctcggtagttaactgcag 40039157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 41016495 - 41016445
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||| ||||| |||||||| |||||||||||||||| ||||||||||||    
T  41016495 cattttcctcggcagttaactaccgaggttttcctcggcagttaactgcag 41016445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 22014320 - 22014279
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||||||||||| |||||||||||||||| ||||||||||    
T  22014320 ctcggtagttaactaccgaggttttcctcggcagttaactgc 22014279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 2712481 - 2712433
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||||||||||||  |||||||||||||||||||||||    
T  2712481 ttttcctcggcagttaactgccgaaattttcctcggtagttaactgcag 2712433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 5533023 - 5533067
Alignment:
Q  200 tctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||    
T  5533023 tctcggtagtttactgccgaagttttcctcggcagttaactgcag 5533067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 15030965 - 15030917
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  15030965 cattttcctcggcagttaactcccgaggttttcctcggcagttaactgc 15030917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 27501679 - 27501631
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  27501679 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 27501631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 27502562 - 27502610
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  27502562 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 27502610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 30025098 - 30025046
Alignment:
Q  189 gttttcatttttct-cggtagttaactgccgaggttttcctcggtagttaact 240  Q
    ||||||| |||||| |||||||| |||||||| ||||||||||||||||||||    
T  30025098 gttttcagttttcttcggtagtttactgccgaagttttcctcggtagttaact 30025046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 31745991 - 31746031
Alignment:
Q  204 ggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  31745991 ggtagtttactgccgaagttttcctcggtagttaactgcag 31746031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 36345082 - 36345034
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||| ||||||||||||||    
T  36345082 ttttcctcggtagtttactgccgaagttttcctcagtagttaactgcag 36345034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 38604242 - 38604290
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  38604242 ttttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 38604290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 39277455 - 39277503
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||||||||| |||||||||||||||| ||||||||||    
T  39277455 ttttcctcggcagttaactgctgaggttttcctcggtaattaactgcag 39277503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 40745278 - 40745326
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||||| ||| |||| |||||||| |||||||||||||||    
T  40745278 tttttctcggtagtttactaccgaagttttccttggtagttaactgcag 40745326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 43363254 - 43363302
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||| ||||| |||||||| ||||||||||||||||||||||||    
T  43363254 ttttcctcgatagtttactgccgaagttttcctcggtagttaactgcag 43363302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 43519981 - 43519933
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||||||| |||||||||| |||||||||||||    
T  43519981 ttttcctcggtagtttactgccgaagttttcctcgatagttaactgcag 43519933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 44052228 - 44052268
Alignment:
Q  204 ggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||| ||||||||||||||||||| |||||||||    
T  44052228 ggtagttaactaccgaggttttcctcggtaggtaactgcag 44052268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 914803 - 914748
Alignment:
Q  189 gttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||| ||| |||||||||| ||| |||| ||||||||||| ||||||||||||    
T  914803 gttttcagtttcctcggtagtttactaccgaagttttcctcggcagttaactgcag 914748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 5332585 - 5332628
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||||||||| ||||||||||| | ||||||||||    
T  5332585 ctcggtagttaactgccgaagttttcctcgggaattaactgcag 5332628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 21406341 - 21406298
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||    
T  21406341 ctcggcagttaactaccgaagttttcctcggtagttaactgcag 21406298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 21800833 - 21800790
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||    
T  21800833 ctcggcagttaactaccgaagttttcctcggtagttaactgcag 21800790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 34892808 - 34892851
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||    
T  34892808 ctcggcagttaactgccgaagttttcctcggcagttaactgcag 34892851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 39601778 - 39601735
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  39601778 ctcggcagttaactcccgaggttttcctcggcagttaactgcag 39601735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 40077249 - 40077292
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||    
T  40077249 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 40077292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 40740980 - 40740937
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||    
T  40740980 ctcggcagttaactgccgaagttttcctcggcagttaactgcag 40740937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 43369854 - 43369811
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||||| ||||| |||||||||||||||| |||||    
T  43369854 ctcggtagttaactgtcgaggatttcctcggtagttaattgcag 43369811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 43520775 - 43520818
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||    
T  43520775 ctcggtagttaactgccgaagttttcctcagcagttaactgcag 43520818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 274
Target Start/End: Original strand, 45133278 - 45133345
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcaggcagttttattttttctcgaccgttaactg 274  Q
    |||||||  |||| |||||||||||||||||||||||| |  ||| |||||| |||||| ||||||||    
T  45133278 agttaacaaccgaagttttcctcggtagttaactgcagccgatttcatttttcctcgacagttaactg 45133345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 184546 - 184592
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  184546 ttttcctcggcagttaactaccgaggttttcctcggcagttaactgc 184592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Complemental strand, 18438707 - 18438665
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||| |||||||||||||||| ||||||||||||    
T  18438707 tcggcagttaactcccgaggttttcctcggcagttaactgcag 18438665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 23578514 - 23578472
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaa 238  Q
    |||| ||||||||||||||||| ||||||||||||| ||||||    
T  23578514 ttttcctcggtagttaactgccaaggttttcctcggcagttaa 23578472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 31185472 - 31185518
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||| ||||||||||||||||||| ||||||||||| | ||||||||    
T  31185472 ttttcctcggtagttaactgccgaagttttcctcggcaattaactgc 31185518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Complemental strand, 34366984 - 34366942
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||| |||||||||||||||| ||||||||||||    
T  34366984 tcggcagttaactaccgaggttttcctcggaagttaactgcag 34366942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 40039684 - 40039726
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||||||  ||||||||||||||||||||||||||||    
T  40039684 tcggcagttaactatcgaggttttcctcggtagttaactgcag 40039726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 42602534 - 42602492
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    ||||| |||||||| |||||||||||||||| |||||||||||    
T  42602534 ctcggcagttaactaccgaggttttcctcggcagttaactgca 42602492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 45252121 - 45252071
Alignment:
Q  195 atttttctcggtagttaactgccgaggttttcctcggtagttaactgcagg 245  Q
    ||||| |||||||||| |||||||| ||||||||||| |||||||| ||||    
T  45252121 attttcctcggtagtttactgccgaagttttcctcgggagttaacttcagg 45252071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 7344556 - 7344597
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  7344556 ctcggcagttaactcccgaggttttcctcggcagttaactgc 7344597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 8419478 - 8419437
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  8419478 ctcggcagttaactaccgaggttttcctcggcagttaactgc 8419437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Original strand, 13783113 - 13783150
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  13783113 agttaactgccgaagttttcctcggcagttaactgcag 13783150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 244
Target Start/End: Complemental strand, 18205862 - 18205817
Alignment:
Q  199 ttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||| |||||||| ||||||||||||| || ||||||||||||    
T  18205862 ttctcggcagttaactaccgaggttttccttggcagttaactgcag 18205817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 26663032 - 26663073
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  26663032 ctcggcagttaactaccgaggttttcctcggcagttaactgc 26663073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 32375725 - 32375684
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  32375725 ctcggcagttaactaccgaggttttcctcggcagttaactgc 32375684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 32382768 - 32382731
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  32382768 agttaattgccgaggttttcctcagtagttaactgcag 32382731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 32436723 - 32436686
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  32436723 agttaattgccgaggttttcctcagtagttaactgcag 32436686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 35962386 - 35962341
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactg 241  Q
    |||| ||||| |||||||| |||||||||||||||| |||||||||    
T  35962386 ttttcctcggcagttaactcccgaggttttcctcggcagttaactg 35962341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 244
Target Start/End: Original strand, 44727510 - 44727547
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  44727510 agttaactaccgaagttttcctcggtagttaactgcag 44727547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 2335142 - 2335190
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| ||| |||| ||||||||||| ||||||||||||    
T  2335142 ttttcctcggtagtttactaccgaagttttcctcggcagttaactgcag 2335190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 3695438 - 3695398
Alignment:
Q  204 ggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||| ||| |||| ||||||||||||||||||||||||    
T  3695438 ggtagtttactaccgaagttttcctcggtagttaactgcag 3695398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 4529234 - 4529270
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactgca 243  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  4529234 agttaactgccgaagttttcttcggtagttaactgca 4529270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 7340148 - 7340100
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||| ||||| |||||||| ||||||  |||||||||||||||||||    
T  7340148 cattttcctcggcagttaactaccgaggaattcctcggtagttaactgc 7340100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 22577741 - 22577697
Alignment:
Q  199 ttctcggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    ||||||| |||||||| |||||||||||||||  |||||||||||    
T  22577741 ttctcggcagttaactaccgaggttttcctcgacagttaactgca 22577697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 28617647 - 28617599
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| |||||||||| |||| ||| ||||||||||| ||||||||||||    
T  28617647 ttttcctcggtagtttactgtcgaagttttcctcggcagttaactgcag 28617599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 32584131 - 32584083
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||| |||||||| ||||||||||| ||||||||||||    
T  32584131 ttttcctcggaagtttactgccgaagttttcctcggcagttaactgcag 32584083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 35047233 - 35047189
Alignment:
Q  200 tctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||||||||| |||  |||||||||| ||||||||||||    
T  35047233 tctcggtagttaactgtcgaaattttcctcggcagttaactgcag 35047189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 36314312 - 36314360
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||||||||  || || | ||||||||||||||||||||||||    
T  36314312 tttttctcggtagttttctaccaaagttttcctcggtagttaactgcag 36314360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 39582564 - 39582524
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||||||||||||||| ||||| |||| |||||||||||    
T  39582564 tcggtagttaactgccgaagtttttctcgatagttaactgc 39582524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 42732774 - 42732822
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||||| | |||| | |||||||||| |||||||||||||    
T  42732774 tttttctcggtagtttattgccaaagttttcctcgatagttaactgcag 42732822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 45066353 - 45066401
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||| ||||| |||||| | |||||||||||||||| ||||||||||    
T  45066353 cattttcctcggcagttaattaccgaggttttcctcggcagttaactgc 45066401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0794 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 5352 - 5302
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||||||||    
T  5352 cattttcctcggcagttaactaccgaggttttcctcggtagttaactgcag 5302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 68457 - 68409
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  68457 tttttctcggtagtttactaccgaagttttcctcggtagttaactgcag 68409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 13902 - 13951
Alignment:
Q  195 atttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| ||||||||||||||||||| ||||| ||||| ||||||||||||    
T  13902 attttcctcggtagttaactgccgatgtttttctcggcagttaactgcag 13951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 10707 - 10744
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaa 238  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  10707 ctcggtagttaactgccgaggatttcctcggtagttaa 10744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 5412 - 5364
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  5412 cattttcctcggcagttaactaccgaggttttcctcggcagttaactgc 5364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 910 - 866
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaact 240  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||    
T  910 ttttcctcggcagttaactaccgaggttttcctcggcagttaact 866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 15949 - 15997
Alignment:
Q  196 tttttctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||||||    
T  15949 ttttcctcggaagttaactaccgaggttttcctcggcagttaactgcag 15997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 50128 - 50080
Alignment:
Q  194 catttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    |||||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  50128 cattttcctcggcagttaactaccgaggttttcctcggcagttaactgc 50080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 433 - 476
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||||||||||| |||||||||||||||  ||||||||||||    
T  433 ctcggtagttaactcccgaggttttcctcgacagttaactgcag 476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 27898 - 27957
Alignment:
Q  184 tctgggttttcatttttctcggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    ||||| |||||| ||| ||||| |||||| ||||||||||||||||  ||||||||||||    
T  27898 tctggattttcagtttactcggcagttaagtgccgaggttttcctccatagttaactgca 27957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 18057 - 18099
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||| ||||||||| |||||||||| |||||||||||||||||    
T  18057 tcggcagttaactgtcgaggttttcttcggtagttaactgcag 18099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 241
Target Start/End: Complemental strand, 18937 - 18903
Alignment:
Q  207 agttaactgccgaggttttcctcggtagttaactg 241  Q
    ||||||||||||||| |||||||||||||||||||    
T  18937 agttaactgccgaggctttcctcggtagttaactg 18903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 12944 - 12986
Alignment:
Q  202 tcggtagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    |||||| | ||| ||||||||||||||||||||||||||||||    
T  12944 tcggtactcaaccgccgaggttttcctcggtagttaactgcag 12986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 244
Target Start/End: Original strand, 134318 - 134356
Alignment:
Q  206 tagttaactgccgaggttttcctcggtagttaactgcag 244  Q
    ||||| |||||||| ||||||||||||||||||||||||    
T  134318 tagtttactgccgaagttttcctcggtagttaactgcag 134356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 422 - 463
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  422 ctcggcagttaactaccgaggttttcctcggcagttaactgc 463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 7492 - 7451
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||||||| ||||||    
T  7492 ctcggcagttaactaccgaggttttcctcggtagtcaactgc 7451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 15617 - 15662
Alignment:
Q  197 ttttctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||||||| |||||||| || ||||||||||||| ||||||||||    
T  15617 ttttctcggcagttaactaccaaggttttcctcggcagttaactgc 15662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 41021 - 41062
Alignment:
Q  201 ctcggtagttaactgccgaggttttcctcggtagttaactgc 242  Q
    ||||| |||||||| |||||||||||||||| ||||||||||    
T  41021 ctcggcagttaactcccgaggttttcctcggcagttaactgc 41062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 65404 - 65444
Alignment:
Q  203 cggtagttaactgccgaggttttcctcggtagttaactgca 243  Q
    |||||||| |||||||| |||||| ||||||||||||||||    
T  65404 cggtagtttactgccgaagttttcttcggtagttaactgca 65444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 512 times since January 2019
Visitors: 2226