View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0169_high_17 (Length: 240)
Name: NF0169_high_17
Description: NF0169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0169_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 4 - 219
Target Start/End: Original strand, 43535433 - 43535648
Alignment:
| Q |
4 |
cacctccgccggagtctttcaaagctttactacatggaattctacggcgaagagttgaagaggttttgtagagatggggaaaggtaggatgagagcgtgg |
103 |
Q |
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| T |
43535433 |
cacctccgccggagtctttcaaagctttactacatggaattctacggcgaagagttgaagaggttttgtagagatggggaaaggtaggatgagagcgtgg |
43535532 |
T |
|
| Q |
104 |
tggtgaagagagtcttcttgaattaaaatggaatttagggaatttgattggattgaagagatgagcatggttggagtttggggtttgaagtgaagggaag |
203 |
Q |
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| T |
43535533 |
tggagaagagagtcttcttgaattaaaatggaatttagggaatttgattggattgaagagatgagcatggttggagtttggggtttgaagtgaagggaag |
43535632 |
T |
|
| Q |
204 |
atagagaatgatgatg |
219 |
Q |
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|||||||||||||||| |
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| T |
43535633 |
atagagaatgatgatg |
43535648 |
T |
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