View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0169_low_14 (Length: 317)

Name: NF0169_low_14
Description: NF0169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0169_low_14
NF0169_low_14
[»] chr8 (59 HSPs)
chr8 (31-297)||(5866129-5866395)
chr8 (32-297)||(17140916-17141181)
chr8 (31-297)||(21490995-21491261)
chr8 (31-297)||(21255222-21255488)
chr8 (31-297)||(21249384-21249650)
chr8 (36-293)||(26355557-26355815)
chr8 (35-297)||(6520368-6520632)
chr8 (34-297)||(38855107-38855372)
chr8 (36-297)||(23760698-23760962)
chr8 (34-281)||(21285613-21285863)
chr8 (34-278)||(20498581-20498829)
chr8 (36-281)||(21673720-21673967)
chr8 (198-297)||(17612132-17612231)
chr8 (34-281)||(983257-983511)
chr8 (225-297)||(21396029-21396101)
chr8 (225-297)||(21790522-21790594)
chr8 (182-297)||(22626736-22626850)
chr8 (199-297)||(31971257-31971354)
chr8 (225-297)||(21389499-21389571)
chr8 (225-297)||(21778825-21778897)
chr8 (219-297)||(16199687-16199765)
chr8 (220-297)||(21919045-21919121)
chr8 (196-290)||(13508105-13508199)
chr8 (196-290)||(13597637-13597731)
chr8 (220-297)||(7372778-7372854)
chr8 (220-297)||(18818454-18818530)
chr8 (220-297)||(18879276-18879352)
chr8 (220-297)||(23406379-23406455)
chr8 (220-300)||(6759255-6759334)
chr8 (225-296)||(28649094-28649164)
chr8 (226-297)||(45131047-45131117)
chr8 (227-297)||(21923980-21924049)
chr8 (220-297)||(16092387-16092463)
chr8 (220-297)||(20536208-20536284)
chr8 (34-278)||(37116366-37116615)
chr8 (199-297)||(22875065-22875162)
chr8 (244-294)||(41598188-41598238)
chr8 (113-278)||(17439439-17439609)
chr8 (226-278)||(17267044-17267096)
chr8 (244-294)||(1484402-1484452)
chr8 (244-294)||(4542485-4542535)
chr8 (244-294)||(5853404-5853454)
chr8 (244-294)||(14409556-14409606)
chr8 (244-294)||(19896265-19896315)
chr8 (244-294)||(20046307-20046357)
chr8 (244-294)||(20403227-20403277)
chr8 (244-294)||(22001753-22001803)
chr8 (244-294)||(26225359-26225409)
chr8 (244-300)||(19937118-19937174)
chr8 (226-278)||(24353039-24353091)
chr8 (244-294)||(4483281-4483330)
chr8 (244-294)||(15203343-15203393)
chr8 (244-290)||(16413428-16413474)
chr8 (244-294)||(26219717-26219767)
chr8 (244-290)||(45290807-45290853)
chr8 (244-281)||(15070571-15070608)
chr8 (225-278)||(19154936-19154989)
chr8 (226-276)||(22525579-22525628)
chr8 (244-294)||(25484380-25484430)
[»] chr5 (56 HSPs)
chr5 (31-297)||(19660690-19660956)
chr5 (36-293)||(22959392-22959649)
chr5 (36-297)||(19668898-19669161)
chr5 (34-293)||(21565546-21565808)
chr5 (34-297)||(21329352-21329618)
chr5 (34-297)||(21502009-21502277)
chr5 (34-297)||(26011890-26012154)
chr5 (34-278)||(20026795-20027043)
chr5 (196-297)||(36314577-36314678)
chr5 (220-297)||(21729109-21729185)
chr5 (220-297)||(21808434-21808510)
chr5 (220-297)||(25421532-25421608)
chr5 (220-294)||(24529223-24529296)
chr5 (220-297)||(8286888-8286964)
chr5 (220-297)||(21997579-21997655)
chr5 (220-297)||(23390541-23390617)
chr5 (226-297)||(21293020-21293090)
chr5 (199-278)||(22144068-22144147)
chr5 (198-297)||(40725853-40725952)
chr5 (199-297)||(24493569-24493666)
chr5 (220-297)||(1096467-1096543)
chr5 (220-297)||(13025311-13025387)
chr5 (220-297)||(13095495-13095571)
chr5 (225-290)||(37723910-37723975)
chr5 (225-297)||(9077952-9078023)
chr5 (199-294)||(22412187-22412281)
chr5 (129-176)||(36314672-36314719)
chr5 (220-297)||(22075018-22075095)
chr5 (34-278)||(22178074-22178323)
chr5 (243-294)||(20909012-20909063)
chr5 (244-294)||(264880-264930)
chr5 (244-294)||(2154726-2154776)
chr5 (244-294)||(10733052-10733102)
chr5 (244-294)||(11581311-11581361)
chr5 (244-294)||(20918060-20918110)
chr5 (244-294)||(29329934-29329984)
chr5 (244-294)||(36154892-36154942)
chr5 (244-294)||(38619434-38619484)
chr5 (244-294)||(39245136-39245186)
chr5 (244-294)||(39363384-39363434)
chr5 (244-293)||(23064512-23064561)
chr5 (220-297)||(25431395-25431470)
chr5 (246-294)||(10775790-10775838)
chr5 (34-89)||(21741400-21741455)
chr5 (244-294)||(29345980-29346030)
chr5 (244-294)||(31061068-31061118)
chr5 (244-294)||(42245477-42245527)
chr5 (244-281)||(20902121-20902158)
chr5 (244-291)||(18319146-18319193)
chr5 (247-294)||(29348453-29348500)
chr5 (247-294)||(29350926-29350973)
chr5 (235-294)||(32027393-32027451)
chr5 (244-294)||(20806854-20806904)
chr5 (227-281)||(26732884-26732937)
chr5 (244-293)||(26704075-26704124)
chr5 (244-293)||(26973808-26973857)
[»] chr7 (69 HSPs)
chr7 (32-297)||(34200786-34201051)
chr7 (31-297)||(28505153-28505419)
chr7 (31-297)||(11995882-11996148)
chr7 (34-297)||(15754744-15755008)
chr7 (129-297)||(16495402-16495570)
chr7 (36-297)||(67745-68008)
chr7 (38-293)||(44014182-44014434)
chr7 (36-297)||(16219574-16219835)
chr7 (36-293)||(18005650-18005910)
chr7 (34-297)||(47831807-47832073)
chr7 (36-293)||(810988-811248)
chr7 (34-281)||(16056344-16056593)
chr7 (34-297)||(22072913-22073181)
chr7 (34-159)||(15113084-15113209)
chr7 (34-159)||(15116621-15116746)
chr7 (220-297)||(16386292-16386369)
chr7 (34-278)||(20220044-20220290)
chr7 (34-281)||(12901339-12901594)
chr7 (182-297)||(2280125-2280238)
chr7 (220-297)||(12698831-12698907)
chr7 (220-297)||(13647325-13647401)
chr7 (198-297)||(19486766-19486865)
chr7 (220-294)||(3564409-3564482)
chr7 (227-297)||(27847881-27847951)
chr7 (199-297)||(38227481-38227578)
chr7 (196-297)||(10063838-10063939)
chr7 (226-295)||(40443393-40443462)
chr7 (225-297)||(9509189-9509260)
chr7 (220-297)||(10589039-10589115)
chr7 (35-108)||(16324197-16324270)
chr7 (220-275)||(12255837-12255892)
chr7 (199-294)||(18456436-18456530)
chr7 (220-297)||(26211995-26212072)
chr7 (244-297)||(18430709-18430762)
chr7 (225-281)||(1868044-1868100)
chr7 (129-294)||(17061909-17062077)
chr7 (244-294)||(456321-456371)
chr7 (244-294)||(3386333-3386383)
chr7 (244-294)||(11972496-11972546)
chr7 (244-294)||(13869346-13869396)
chr7 (244-294)||(14949234-14949284)
chr7 (244-294)||(15376825-15376875)
chr7 (244-294)||(16213684-16213734)
chr7 (244-294)||(16232520-16232570)
chr7 (244-294)||(16410059-16410109)
chr7 (244-294)||(18640272-18640322)
chr7 (244-294)||(20110556-20110606)
chr7 (244-294)||(20385235-20385285)
chr7 (244-294)||(21189707-21189757)
chr7 (244-294)||(24702238-24702288)
chr7 (244-294)||(24704688-24704738)
chr7 (244-294)||(32125491-32125541)
chr7 (244-294)||(41522917-41522967)
chr7 (244-294)||(41525379-41525429)
chr7 (220-294)||(48273392-48273465)
chr7 (244-293)||(11393399-11393448)
chr7 (113-281)||(14044762-14044935)
chr7 (113-281)||(14354792-14354965)
chr7 (235-294)||(13831373-13831431)
chr7 (199-271)||(48991206-48991280)
chr7 (244-290)||(24275175-24275221)
chr7 (244-294)||(27216860-27216910)
chr7 (244-294)||(44116509-44116559)
chr7 (225-274)||(15008548-15008597)
chr7 (244-281)||(15144105-15144142)
chr7 (228-276)||(9177718-9177766)
chr7 (34-74)||(9389552-9389592)
chr7 (244-290)||(38898489-38898535)
chr7 (226-278)||(18203831-18203882)
[»] scaffold0046 (4 HSPs)
scaffold0046 (31-297)||(11292-11558)
scaffold0046 (65-297)||(1997-2229)
scaffold0046 (220-297)||(28414-28490)
scaffold0046 (241-297)||(4552-4608)
[»] scaffold0175 (2 HSPs)
scaffold0175 (30-297)||(34123-34390)
scaffold0175 (244-297)||(273-326)
[»] chr4 (61 HSPs)
chr4 (31-297)||(15551817-15552082)
chr4 (31-259)||(16596686-16596914)
chr4 (34-293)||(12774011-12774263)
chr4 (34-278)||(13705-13953)
chr4 (34-293)||(8846360-8846638)
chr4 (34-297)||(39706144-39706409)
chr4 (36-281)||(12288066-12288315)
chr4 (34-281)||(43198410-43198660)
chr4 (220-297)||(3096293-3096369)
chr4 (220-297)||(12902757-12902833)
chr4 (225-297)||(17046487-17046559)
chr4 (220-297)||(7088877-7088953)
chr4 (220-297)||(7798774-7798850)
chr4 (220-281)||(52243240-52243301)
chr4 (220-297)||(52873412-52873488)
chr4 (219-297)||(14053344-14053422)
chr4 (227-295)||(22636437-22636504)
chr4 (219-294)||(16377565-16377639)
chr4 (199-297)||(16270259-16270356)
chr4 (220-290)||(23374404-23374473)
chr4 (220-297)||(6899891-6899967)
chr4 (220-297)||(7893703-7893779)
chr4 (220-297)||(44052829-44052905)
chr4 (35-163)||(15099485-15099613)
chr4 (244-294)||(54798822-54798872)
chr4 (34-163)||(15190452-15190581)
chr4 (244-300)||(19242693-19242749)
chr4 (244-294)||(12419-12469)
chr4 (244-294)||(1837621-1837671)
chr4 (244-294)||(7641294-7641344)
chr4 (244-294)||(12610950-12611000)
chr4 (244-294)||(14280316-14280366)
chr4 (244-294)||(15118464-15118514)
chr4 (199-297)||(16239993-16240090)
chr4 (244-294)||(18215386-18215436)
chr4 (244-294)||(18239531-18239581)
chr4 (244-294)||(23803377-23803427)
chr4 (244-294)||(44102214-44102264)
chr4 (244-294)||(44615288-44615338)
chr4 (244-294)||(44773199-44773249)
chr4 (244-294)||(44928992-44929042)
chr4 (244-294)||(50222451-50222501)
chr4 (244-294)||(51463980-51464030)
chr4 (244-294)||(52312510-52312560)
chr4 (34-163)||(53082005-53082135)
chr4 (244-297)||(15367690-15367743)
chr4 (244-297)||(15370018-15370071)
chr4 (244-297)||(15371202-15371255)
chr4 (244-297)||(15373483-15373536)
chr4 (244-297)||(15402703-15402756)
chr4 (244-297)||(16223532-16223585)
chr4 (244-292)||(14038653-14038701)
chr4 (244-296)||(19618284-19618336)
chr4 (34-278)||(46640311-46640558)
chr4 (244-295)||(22353835-22353886)
chr4 (244-294)||(3515007-3515057)
chr4 (228-278)||(6190481-6190531)
chr4 (244-294)||(8574935-8574985)
chr4 (244-290)||(15355437-15355483)
chr4 (226-278)||(53082202-53082254)
chr4 (244-281)||(14970819-14970856)
[»] scaffold0261 (1 HSPs)
scaffold0261 (31-294)||(15664-15927)
[»] chr6 (67 HSPs)
chr6 (34-297)||(28496329-28496592)
chr6 (34-297)||(29808740-29809003)
chr6 (34-297)||(1561303-1561567)
chr6 (34-293)||(19652199-19652459)
chr6 (34-281)||(19668387-19668638)
chr6 (34-278)||(23019425-23019672)
chr6 (34-297)||(20109140-20109407)
chr6 (196-297)||(27333238-27333339)
chr6 (196-297)||(27393978-27394079)
chr6 (34-281)||(9098380-9098619)
chr6 (220-297)||(16496244-16496320)
chr6 (225-297)||(35245586-35245658)
chr6 (199-297)||(20076700-20076797)
chr6 (220-297)||(20638328-20638404)
chr6 (225-297)||(16920679-16920751)
chr6 (198-297)||(8227533-8227632)
chr6 (199-297)||(19303564-19303661)
chr6 (220-281)||(25644336-25644397)
chr6 (220-297)||(29060540-29060616)
chr6 (229-297)||(22831503-22831571)
chr6 (34-278)||(35008167-35008416)
chr6 (199-297)||(17287819-17287917)
chr6 (195-281)||(4185840-4185926)
chr6 (220-297)||(22780272-22780348)
chr6 (234-285)||(11185517-11185568)
chr6 (225-296)||(18409877-18409947)
chr6 (35-278)||(23076749-23076997)
chr6 (34-108)||(27333140-27333214)
chr6 (34-108)||(27393880-27393954)
chr6 (228-297)||(20361013-20361081)
chr6 (34-103)||(22080594-22080663)
chr6 (244-297)||(25629423-25629476)
chr6 (244-297)||(25714417-25714470)
chr6 (244-294)||(2291292-2291342)
chr6 (244-294)||(3852129-3852179)
chr6 (195-281)||(4186383-4186469)
chr6 (244-294)||(8055029-8055079)
chr6 (244-294)||(12742317-12742367)
chr6 (244-294)||(18334704-18334754)
chr6 (244-294)||(19005046-19005096)
chr6 (244-294)||(19859031-19859081)
chr6 (244-294)||(22782227-22782277)
chr6 (244-294)||(24422547-24422597)
chr6 (244-294)||(25656629-25656679)
chr6 (244-294)||(25754809-25754859)
chr6 (244-294)||(26924752-26924802)
chr6 (244-294)||(33861794-33861844)
chr6 (244-294)||(33864278-33864328)
chr6 (225-297)||(20593773-20593844)
chr6 (244-296)||(30676822-30676874)
chr6 (244-294)||(1541023-1541073)
chr6 (244-294)||(1595549-1595599)
chr6 (34-100)||(4668069-4668135)
chr6 (34-100)||(4674916-4674982)
chr6 (244-294)||(20557004-20557054)
chr6 (253-297)||(22080802-22080846)
chr6 (244-296)||(34963371-34963423)
chr6 (244-291)||(16448639-16448686)
chr6 (195-238)||(22080757-22080800)
chr6 (225-276)||(33443068-33443118)
chr6 (34-100)||(4185679-4185745)
chr6 (244-278)||(18456735-18456769)
chr6 (244-278)||(18461895-18461929)
chr6 (244-278)||(18821912-18821946)
chr6 (244-294)||(25688502-25688552)
chr6 (195-239)||(4668230-4668274)
chr6 (195-239)||(4675077-4675121)
[»] chr1 (54 HSPs)
chr1 (31-281)||(20918620-20918870)
chr1 (34-281)||(52927837-52928075)
chr1 (34-297)||(33681010-33681273)
chr1 (36-293)||(20248283-20248539)
chr1 (129-297)||(14295504-14295672)
chr1 (34-297)||(22237630-22237894)
chr1 (34-293)||(22921724-22921986)
chr1 (34-290)||(21754052-21754301)
chr1 (112-244)||(22130843-22130975)
chr1 (129-229)||(51130632-51130732)
chr1 (34-278)||(21861424-21861672)
chr1 (34-278)||(21896113-21896358)
chr1 (226-297)||(20847205-20847275)
chr1 (194-281)||(16758665-16758754)
chr1 (35-173)||(20636975-20637113)
chr1 (220-297)||(27250774-27250850)
chr1 (122-278)||(35261023-35261180)
chr1 (220-297)||(45574932-45575008)
chr1 (221-297)||(38801433-38801508)
chr1 (220-296)||(50210258-50210333)
chr1 (34-159)||(12271695-12271813)
chr1 (220-294)||(34509783-34509856)
chr1 (220-297)||(21026680-21026756)
chr1 (34-158)||(49261481-49261605)
chr1 (244-297)||(13212974-13213027)
chr1 (34-163)||(16368141-16368270)
chr1 (220-297)||(22532269-22532345)
chr1 (228-296)||(20454606-20454673)
chr1 (244-300)||(21342090-21342146)
chr1 (235-294)||(21707167-21707225)
chr1 (235-294)||(21711709-21711767)
chr1 (244-294)||(13988866-13988916)
chr1 (244-294)||(21346961-21347011)
chr1 (244-294)||(21923403-21923453)
chr1 (244-294)||(23593847-23593897)
chr1 (244-294)||(29298137-29298187)
chr1 (244-294)||(29776688-29776738)
chr1 (244-294)||(31612313-31612363)
chr1 (246-294)||(433012-433060)
chr1 (244-300)||(15860121-15860177)
chr1 (226-278)||(50614167-50614219)
chr1 (226-278)||(50621995-50622047)
chr1 (244-295)||(21840766-21840817)
chr1 (235-294)||(22123171-22123230)
chr1 (246-296)||(16361915-16361965)
chr1 (228-278)||(16368338-16368388)
chr1 (195-293)||(21161720-21161817)
chr1 (244-294)||(21475199-21475249)
chr1 (226-276)||(26064959-26065009)
chr1 (244-293)||(21714546-21714595)
chr1 (38-163)||(35981547-35981672)
chr1 (244-294)||(16275476-16275526)
chr1 (225-278)||(41050085-41050138)
chr1 (226-278)||(21533923-21533974)
[»] chr2 (63 HSPs)
chr2 (76-297)||(23071849-23072070)
chr2 (38-293)||(25175854-25176112)
chr2 (34-292)||(28405981-28406243)
chr2 (34-296)||(22134072-22134326)
chr2 (34-281)||(18786757-18787008)
chr2 (134-293)||(7679589-7679750)
chr2 (34-159)||(22459416-22459541)
chr2 (196-297)||(19671830-19671931)
chr2 (199-297)||(38138-38235)
chr2 (34-278)||(7587-7835)
chr2 (225-297)||(20309108-20309180)
chr2 (199-297)||(23654409-23654507)
chr2 (220-294)||(298859-298933)
chr2 (219-297)||(23103439-23103516)
chr2 (220-297)||(23060513-23060589)
chr2 (220-297)||(23285865-23285941)
chr2 (34-278)||(23791292-23791541)
chr2 (220-294)||(22105412-22105485)
chr2 (114-297)||(23708553-23708738)
chr2 (220-297)||(23076442-23076518)
chr2 (34-278)||(23207296-23207544)
chr2 (227-297)||(22731286-22731355)
chr2 (220-297)||(8946657-8946733)
chr2 (244-297)||(22337115-22337168)
chr2 (244-297)||(23040257-23040310)
chr2 (182-297)||(23660023-23660137)
chr2 (244-297)||(22738247-22738300)
chr2 (235-294)||(45029958-45030016)
chr2 (244-294)||(571397-571447)
chr2 (244-294)||(6725995-6726045)
chr2 (244-294)||(18808943-18808993)
chr2 (244-294)||(23130862-23130912)
chr2 (244-294)||(23133329-23133379)
chr2 (244-294)||(23135590-23135640)
chr2 (244-294)||(23709644-23709694)
chr2 (244-294)||(23712125-23712175)
chr2 (244-294)||(26505379-26505429)
chr2 (244-294)||(26507857-26507907)
chr2 (244-294)||(28577099-28577149)
chr2 (244-294)||(34402634-34402684)
chr2 (244-294)||(38967374-38967424)
chr2 (244-294)||(39682313-39682363)
chr2 (225-278)||(22413187-22413240)
chr2 (235-296)||(32215025-32215085)
chr2 (226-278)||(25108906-25108958)
chr2 (244-292)||(43137301-43137349)
chr2 (244-291)||(21155172-21155219)
chr2 (235-294)||(24529633-24529691)
chr2 (244-291)||(24643062-24643109)
chr2 (244-294)||(24367774-24367824)
chr2 (244-294)||(32039610-32039660)
chr2 (226-278)||(20520243-20520295)
chr2 (244-294)||(24898307-24898358)
chr2 (244-294)||(24900790-24900841)
chr2 (244-294)||(24903267-24903318)
chr2 (244-294)||(24905744-24905795)
chr2 (244-294)||(24908219-24908270)
chr2 (226-276)||(23287384-23287433)
chr2 (228-278)||(32451981-32452031)
chr2 (227-276)||(26392403-26392451)
chr2 (226-278)||(23004767-23004819)
chr2 (31-59)||(23071815-23071843)
chr2 (226-278)||(24697657-24697709)
[»] chr3 (79 HSPs)
chr3 (34-297)||(13210184-13210448)
chr3 (34-293)||(16097332-16097594)
chr3 (69-293)||(12174152-12174376)
chr3 (34-293)||(16103784-16104045)
chr3 (34-290)||(32307684-32307933)
chr3 (36-293)||(9512924-9513171)
chr3 (36-293)||(9520899-9521146)
chr3 (34-297)||(15470927-15471189)
chr3 (34-290)||(1644539-1644787)
chr3 (34-182)||(49389485-49389633)
chr3 (34-293)||(49667940-49668193)
chr3 (36-297)||(14234487-14234753)
chr3 (34-135)||(12934167-12934268)
chr3 (122-278)||(52523669-52523831)
chr3 (34-278)||(37251022-37251270)
chr3 (220-297)||(12399209-12399285)
chr3 (196-297)||(24340743-24340844)
chr3 (220-297)||(20698480-20698556)
chr3 (196-297)||(23274687-23274788)
chr3 (220-297)||(26686887-26686963)
chr3 (199-297)||(18438534-18438632)
chr3 (199-297)||(23083384-23083482)
chr3 (207-294)||(27165250-27165337)
chr3 (198-297)||(37642287-37642386)
chr3 (199-294)||(53301574-53301669)
chr3 (199-297)||(11424783-11424880)
chr3 (220-297)||(13442274-13442350)
chr3 (220-297)||(14972854-14972930)
chr3 (232-294)||(28194693-28194755)
chr3 (244-297)||(17487856-17487909)
chr3 (244-297)||(17499338-17499391)
chr3 (220-297)||(43840932-43841008)
chr3 (112-297)||(43550456-43550644)
chr3 (199-281)||(14572605-14572686)
chr3 (232-294)||(17672626-17672687)
chr3 (34-163)||(1465266-1465395)
chr3 (198-297)||(22147547-22147646)
chr3 (199-294)||(24153232-24153326)
chr3 (244-294)||(6469246-6469296)
chr3 (244-294)||(7781459-7781509)
chr3 (244-294)||(8499518-8499568)
chr3 (244-294)||(9707719-9707769)
chr3 (244-294)||(10556985-10557035)
chr3 (244-294)||(15412429-15412479)
chr3 (244-294)||(15977515-15977565)
chr3 (244-294)||(17463178-17463228)
chr3 (244-294)||(17737236-17737286)
chr3 (244-294)||(28848723-28848773)
chr3 (244-294)||(29172695-29172745)
chr3 (244-294)||(34159326-34159376)
chr3 (244-294)||(36166598-36166648)
chr3 (244-294)||(45577950-45578000)
chr3 (244-294)||(45607019-45607069)
chr3 (244-294)||(55476491-55476541)
chr3 (244-294)||(55500942-55500992)
chr3 (244-297)||(25476453-25476506)
chr3 (244-292)||(16282923-16282971)
chr3 (226-278)||(22110402-22110454)
chr3 (244-292)||(41123892-41123940)
chr3 (226-278)||(43925977-43926029)
chr3 (244-295)||(13544024-13544075)
chr3 (220-279)||(42386428-42386486)
chr3 (244-294)||(8899094-8899144)
chr3 (244-294)||(10247835-10247885)
chr3 (244-294)||(12119837-12119887)
chr3 (244-290)||(12567564-12567610)
chr3 (244-294)||(16454393-16454443)
chr3 (244-294)||(38962003-38962053)
chr3 (244-294)||(40213788-40213838)
chr3 (244-294)||(44494809-44494859)
chr3 (244-294)||(50242822-50242872)
chr3 (244-281)||(21618462-21618499)
chr3 (244-294)||(13151902-13151953)
chr3 (244-294)||(13154367-13154418)
chr3 (228-278)||(606378-606428)
chr3 (225-278)||(12377940-12377993)
chr3 (244-294)||(17446767-17446816)
chr3 (244-278)||(53070765-53070799)
chr3 (225-281)||(14576882-14576937)
[»] scaffold0218 (2 HSPs)
scaffold0218 (31-250)||(29132-29354)
scaffold0218 (34-281)||(7931-8179)
[»] scaffold0161 (1 HSPs)
scaffold0161 (31-242)||(2297-2508)
[»] scaffold0556 (2 HSPs)
scaffold0556 (36-278)||(6831-7073)
scaffold0556 (34-175)||(8140-8281)
[»] scaffold0125 (1 HSPs)
scaffold0125 (34-293)||(45647-45909)
[»] scaffold0555 (1 HSPs)
scaffold0555 (34-281)||(10396-10646)
[»] scaffold0010 (2 HSPs)
scaffold0010 (34-281)||(129921-130171)
scaffold0010 (220-278)||(60760-60818)
[»] scaffold0184 (1 HSPs)
scaffold0184 (129-297)||(1022-1190)
[»] scaffold0001 (3 HSPs)
scaffold0001 (34-293)||(160688-160949)
scaffold0001 (244-294)||(85692-85742)
scaffold0001 (244-290)||(501088-501134)
[»] scaffold1984 (1 HSPs)
scaffold1984 (34-293)||(133-394)
[»] scaffold0037 (2 HSPs)
scaffold0037 (34-281)||(22529-22775)
scaffold0037 (244-294)||(82072-82122)
[»] scaffold1765 (1 HSPs)
scaffold1765 (34-281)||(1098-1348)
[»] scaffold0476 (1 HSPs)
scaffold0476 (34-297)||(12766-13032)
[»] scaffold0621 (2 HSPs)
scaffold0621 (36-297)||(6535-6798)
scaffold0621 (34-281)||(8482-8735)
[»] scaffold0243 (1 HSPs)
scaffold0243 (36-297)||(5980-6244)
[»] scaffold0102 (1 HSPs)
scaffold0102 (36-293)||(19268-19528)
[»] scaffold0023 (8 HSPs)
scaffold0023 (34-293)||(100378-100640)
scaffold0023 (34-293)||(40029-40291)
scaffold0023 (224-297)||(119875-119948)
scaffold0023 (215-293)||(101503-101581)
scaffold0023 (34-77)||(101616-101659)
scaffold0023 (244-294)||(44454-44504)
scaffold0023 (244-294)||(94411-94461)
scaffold0023 (244-290)||(17552-17598)
[»] scaffold0078 (1 HSPs)
scaffold0078 (34-281)||(10543-10793)
[»] scaffold0333 (2 HSPs)
scaffold0333 (34-297)||(6611-6877)
scaffold0333 (34-297)||(13991-14257)
[»] scaffold0028 (7 HSPs)
scaffold0028 (40-279)||(62216-62455)
scaffold0028 (34-293)||(132662-132917)
scaffold0028 (244-294)||(136680-136730)
scaffold0028 (244-294)||(139149-139199)
scaffold0028 (244-294)||(144087-144137)
scaffold0028 (244-294)||(134211-134261)
scaffold0028 (244-294)||(141618-141668)
[»] scaffold0075 (1 HSPs)
scaffold0075 (34-278)||(53403-53651)
[»] scaffold0278 (1 HSPs)
scaffold0278 (36-281)||(5659-5906)
[»] scaffold0207 (1 HSPs)
scaffold0207 (36-293)||(2502-2762)
[»] scaffold0150 (1 HSPs)
scaffold0150 (46-293)||(32102-32345)
[»] scaffold0530 (1 HSPs)
scaffold0530 (36-297)||(892-1155)
[»] scaffold0034 (1 HSPs)
scaffold0034 (34-297)||(32538-32801)
[»] scaffold0008 (1 HSPs)
scaffold0008 (36-293)||(14554-14814)
[»] scaffold0138 (1 HSPs)
scaffold0138 (34-297)||(12942-13205)
[»] scaffold0211 (2 HSPs)
scaffold0211 (34-143)||(28666-28775)
scaffold0211 (220-293)||(28813-28887)
[»] scaffold0020 (3 HSPs)
scaffold0020 (195-297)||(15796-15898)
scaffold0020 (34-108)||(15687-15761)
scaffold0020 (244-293)||(178898-178947)
[»] scaffold0413 (1 HSPs)
scaffold0413 (34-278)||(12587-12834)
[»] scaffold0628 (1 HSPs)
scaffold0628 (34-293)||(2659-2923)
[»] scaffold0507 (1 HSPs)
scaffold0507 (38-276)||(7917-8161)
[»] scaffold1257 (1 HSPs)
scaffold1257 (34-241)||(2073-2283)
[»] scaffold0106 (3 HSPs)
scaffold0106 (225-297)||(7266-7338)
scaffold0106 (227-297)||(1289-1359)
scaffold0106 (244-294)||(15306-15356)
[»] scaffold0100 (1 HSPs)
scaffold0100 (195-297)||(23902-24001)
[»] scaffold0021 (4 HSPs)
scaffold0021 (34-278)||(136222-136471)
scaffold0021 (34-278)||(144930-145179)
scaffold0021 (225-296)||(174767-174838)
scaffold0021 (227-297)||(121766-121835)
[»] scaffold1842 (1 HSPs)
scaffold1842 (220-297)||(1093-1169)
[»] scaffold0358 (1 HSPs)
scaffold0358 (220-297)||(4712-4788)
[»] scaffold0011 (2 HSPs)
scaffold0011 (220-297)||(168023-168099)
scaffold0011 (220-297)||(51913-51989)
[»] scaffold0461 (1 HSPs)
scaffold0461 (198-297)||(11464-11563)
[»] scaffold0124 (1 HSPs)
scaffold0124 (198-297)||(38278-38377)
[»] scaffold0540 (1 HSPs)
scaffold0540 (199-297)||(3174-3271)
[»] scaffold0064 (1 HSPs)
scaffold0064 (227-297)||(46995-47065)
[»] scaffold0120 (4 HSPs)
scaffold0120 (220-297)||(16113-16189)
scaffold0120 (199-297)||(32980-33077)
scaffold0120 (199-297)||(45928-46025)
scaffold0120 (244-297)||(17397-17450)
[»] scaffold2014 (1 HSPs)
scaffold2014 (194-278)||(1051-1135)
[»] scaffold0456 (1 HSPs)
scaffold0456 (225-297)||(10472-10544)
[»] scaffold0351 (1 HSPs)
scaffold0351 (225-297)||(16282-16354)
[»] scaffold0141 (1 HSPs)
scaffold0141 (199-295)||(39479-39574)
[»] scaffold0049 (1 HSPs)
scaffold0049 (199-295)||(75238-75333)
[»] scaffold0032 (1 HSPs)
scaffold0032 (225-297)||(51582-51654)
[»] scaffold0908 (1 HSPs)
scaffold0908 (182-296)||(3192-3306)
[»] scaffold0357 (3 HSPs)
scaffold0357 (182-281)||(16106-16205)
scaffold0357 (182-278)||(13147-13243)
scaffold0357 (226-278)||(2680-2732)
[»] scaffold0165 (1 HSPs)
scaffold0165 (182-281)||(27755-27854)
[»] scaffold0113 (1 HSPs)
scaffold0113 (226-297)||(32067-32137)
[»] scaffold0427 (1 HSPs)
scaffold0427 (199-297)||(13497-13594)
[»] scaffold0114 (1 HSPs)
scaffold0114 (199-297)||(15487-15584)
[»] scaffold1137 (1 HSPs)
scaffold1137 (34-143)||(2158-2267)
[»] scaffold0403 (1 HSPs)
scaffold0403 (220-297)||(4849-4925)
[»] scaffold0247 (2 HSPs)
scaffold0247 (196-297)||(18047-18148)
scaffold0247 (244-294)||(2241-2291)
[»] scaffold0647 (1 HSPs)
scaffold0647 (220-297)||(6166-6245)
[»] scaffold0598 (1 HSPs)
scaffold0598 (225-297)||(1098-1170)
[»] scaffold0056 (2 HSPs)
scaffold0056 (220-296)||(17262-17337)
scaffold0056 (244-278)||(79396-79430)
[»] scaffold0003 (2 HSPs)
scaffold0003 (199-294)||(339972-340065)
scaffold0003 (244-294)||(158562-158612)
[»] scaffold0718 (1 HSPs)
scaffold0718 (231-294)||(5183-5246)
[»] scaffold0074 (1 HSPs)
scaffold0074 (199-294)||(38725-38820)
[»] scaffold0040 (1 HSPs)
scaffold0040 (34-281)||(103493-103736)
[»] scaffold0235 (1 HSPs)
scaffold0235 (220-297)||(11488-11564)
[»] scaffold0193 (1 HSPs)
scaffold0193 (220-297)||(13211-13287)
[»] scaffold0016 (2 HSPs)
scaffold0016 (220-297)||(1851-1927)
scaffold0016 (129-181)||(207470-207522)
[»] scaffold0145 (3 HSPs)
scaffold0145 (199-297)||(32942-33039)
scaffold0145 (199-297)||(38761-38858)
scaffold0145 (244-299)||(9744-9799)
[»] scaffold0122 (2 HSPs)
scaffold0122 (220-290)||(26110-26179)
scaffold0122 (220-294)||(44752-44825)
[»] scaffold0080 (2 HSPs)
scaffold0080 (199-297)||(39913-40010)
scaffold0080 (37-278)||(19742-19987)
[»] scaffold0026 (2 HSPs)
scaffold0026 (199-297)||(25896-25993)
scaffold0026 (199-297)||(39858-39955)
[»] scaffold0490 (1 HSPs)
scaffold0490 (220-297)||(1952-2028)
[»] scaffold0292 (2 HSPs)
scaffold0292 (220-297)||(343-419)
scaffold0292 (220-297)||(3470-3546)
[»] scaffold0121 (1 HSPs)
scaffold0121 (199-297)||(8556-8650)
[»] scaffold0022 (4 HSPs)
scaffold0022 (65-278)||(128855-129072)
scaffold0022 (244-294)||(116430-116480)
scaffold0022 (35-163)||(78459-78587)
scaffold0022 (228-274)||(78345-78391)
[»] scaffold0639 (1 HSPs)
scaffold0639 (244-297)||(8479-8532)
[»] scaffold0217 (1 HSPs)
scaffold0217 (244-297)||(16668-16721)
[»] scaffold0088 (1 HSPs)
scaffold0088 (220-297)||(20910-20987)
[»] scaffold0123 (1 HSPs)
scaffold0123 (225-281)||(25122-25178)
[»] scaffold0395 (1 HSPs)
scaffold0395 (230-297)||(4888-4954)
[»] scaffold0042 (1 HSPs)
scaffold0042 (220-279)||(24348-24406)
[»] scaffold0444 (1 HSPs)
scaffold0444 (244-294)||(13392-13442)
[»] scaffold0254 (1 HSPs)
scaffold0254 (244-294)||(20747-20797)
[»] scaffold0231 (1 HSPs)
scaffold0231 (244-294)||(22886-22936)
[»] scaffold0142 (1 HSPs)
scaffold0142 (244-294)||(16784-16834)
[»] scaffold0134 (1 HSPs)
scaffold0134 (244-294)||(37821-37871)
[»] scaffold0420 (2 HSPs)
scaffold0420 (34-278)||(6137-6386)
scaffold0420 (231-278)||(13793-13840)
[»] scaffold0006 (2 HSPs)
scaffold0006 (34-278)||(97024-97272)
scaffold0006 (34-278)||(106302-106550)
[»] scaffold0761 (1 HSPs)
scaffold0761 (244-291)||(4300-4347)
[»] scaffold0454 (1 HSPs)
scaffold0454 (244-295)||(10772-10823)
[»] scaffold0363 (1 HSPs)
scaffold0363 (244-295)||(9241-9292)
[»] scaffold0070 (1 HSPs)
scaffold0070 (221-276)||(4545-4599)
[»] scaffold1439 (1 HSPs)
scaffold1439 (244-294)||(106-156)
[»] scaffold1403 (1 HSPs)
scaffold1403 (228-278)||(569-619)
[»] scaffold0716 (1 HSPs)
scaffold0716 (244-294)||(4694-4744)
[»] scaffold0475 (2 HSPs)
scaffold0475 (34-100)||(9275-9341)
scaffold0475 (195-239)||(9136-9180)
[»] scaffold0230 (1 HSPs)
scaffold0230 (244-294)||(13947-13997)
[»] scaffold0044 (1 HSPs)
scaffold0044 (244-294)||(40400-40450)
[»] scaffold0007 (1 HSPs)
scaffold0007 (248-294)||(161206-161252)
[»] scaffold0394 (1 HSPs)
scaffold0394 (253-294)||(12064-12105)
[»] scaffold0198 (1 HSPs)
scaffold0198 (244-293)||(23843-23892)
[»] scaffold0139 (1 HSPs)
scaffold0139 (225-274)||(38339-38388)
[»] scaffold0131 (1 HSPs)
scaffold0131 (244-293)||(36454-36503)
[»] scaffold0819 (1 HSPs)
scaffold0819 (246-294)||(4214-4262)
[»] scaffold0494 (1 HSPs)
scaffold0494 (244-296)||(12361-12413)
[»] scaffold0149 (1 HSPs)
scaffold0149 (244-280)||(29946-29982)
[»] scaffold0101 (1 HSPs)
scaffold0101 (244-291)||(1393-1440)
[»] scaffold0503 (1 HSPs)
scaffold0503 (244-278)||(11982-12016)
[»] scaffold0090 (1 HSPs)
scaffold0090 (225-278)||(2694-2747)
[»] scaffold0031 (2 HSPs)
scaffold0031 (244-278)||(20490-20524)
scaffold0031 (243-297)||(128751-128805)
[»] scaffold0228 (3 HSPs)
scaffold0228 (244-297)||(4508-4560)
scaffold0228 (244-297)||(12090-12142)
scaffold0228 (244-297)||(22042-22094)
[»] scaffold0005 (1 HSPs)
scaffold0005 (225-278)||(267679-267732)
[»] scaffold0737 (1 HSPs)
scaffold0737 (34-161)||(1652-1779)
[»] scaffold0029 (1 HSPs)
scaffold0029 (244-296)||(11286-11338)


Alignment Details
Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 5866129 - 5866395
Alignment:
Q  31 gttcgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctt 130  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5866129 gttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctt 5866228  T
Q  131 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||    
T  5866229 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactg 5866328  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  5866329 cctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 5866395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 32 - 297
Target Start/End: Complemental strand, 17141181 - 17140916
Alignment:
Q  32 ttcgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctta 131  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17141181 ttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctta 17141082  T
Q  132 taatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgc 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||| |||| |||||||||||    
T  17141081 taatgttatataattgtatatacattacatgacttaagtttgataattgagttgatgatttacattcgatattattatgtcatgatggattgcatactgc 17140982  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17140981 ctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 17140916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 21491261 - 21490995
Alignment:
Q  31 gttcgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctt 130  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21491261 gttcgagttaatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcctatgaattaatgttgctt 21491162  T
Q  131 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||| |||||||||||||||    
T  21491161 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgttgatttacattcaatattattatatcatgatggtttgcatactg 21491062  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21491061 cctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 21490995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 21255488 - 21255222
Alignment:
Q  31 gttcgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctt 130  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||| ||| ||||||||||||  || |||||||||||||||||||||||||||||||    
T  21255488 gttcgagttgatgtgagtttatcttagaggttaggaactaagttgtt-accctgctgttaatgtctcactaagactgatgcttatgaattaatgttgctt 21255390  T
Q  131 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||  ||||||||||    
T  21255389 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgttgatttacattcgatattattatatcatgatgaattgcatactg 21255290  T
Q  231 cctatgttg-ttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    | ||||||| |  ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21255289 cttatgttgctatttttttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 21255222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 21249650 - 21249384
Alignment:
Q  31 gttcgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctt 130  Q
    |||| |||||||||||||| |||||||||||||  |||||||||||| ||| ||||||||||||  || |||||||||||||||||||||||||||||||    
T  21249650 gttcaagttgatgtgagtttatcttagaggttaggaactaagttgtt-accctgctgttaatgtctcactaagactgatgcttatgaattaatgttgctt 21249552  T
Q  131 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||  ||||||||||    
T  21249551 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgttgatttacattcgatattattatatcatgatgaattgcatactg 21249452  T
Q  231 cctatgttg-ttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    | ||||||| |  ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21249451 cttatgttgctatttttttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 21249384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 36 - 293
Target Start/End: Original strand, 26355557 - 26355815
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataat 135  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||  ||||| ||||| |||||||||||||| |||||||| |||||| |||||||    
T  26355557 agttgatgtgagttgatcttagaggttagaaactaagttgtttatctttttgttattgttctagtaagactgatgcatatgaattgatgttgtttataat 26355656  T
Q  136 gttatataattgtatatacattacatgacttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgcct 233  Q
    ||||||||||||||||||||||| |||   || | |||||   |||| || || |  ||  |||||||||| ||||||| | ||| ||||||||||||||    
T  26355657 gttatataattgtatatacattaaatggaatatg-ttgatggctgagatgttgttgattgcattcgatattgttatatcgtgatgatttgcatactgcct 26355755  T
Q  234 atgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||    
T  26355756 atgttgttgtttgttgtttaactaagctgcatgagtcggtctaagttgatgatgatgatg 26355815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 35 - 297
Target Start/End: Complemental strand, 6520632 - 6520368
Alignment:
Q  35 gagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataa 134  Q
    ||||||||||||||||||||| ||||||| |||||||||| |||| |||||||||  |||| ||||||| ||||    ||| |  |||||||| |  |||    
T  6520632 gagttgatgtgagttgatcttggaggttagaaactaagttatttatcttgctgttgttgtttcagtaagcctgaattgtataatctaatgttgttgctaa 6520533  T
Q  135 tgttatataattgtatatacattacatgacttaagtt--tgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcc 232  Q
    ||||||||||||||||||||||||||||| ||| |||  || | ||   |||| ||| ||  |||||||||| ||||||||| ||| |||||||||||||    
T  6520532 tgttatataattgtatatacattacatgaattatgttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactgcc 6520433  T
Q  233 tatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  6520432 tatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 6520368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 34 - 297
Target Start/End: Original strand, 38855107 - 38855372
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    ||||||||||||| |||||||| ||  |||  |||||||||||||| |||||||||  |||| ||||||| ||||    ||| |  |||||||| |  ||    
T  38855107 cgagttgatgtgaattgatcttggacattaggaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattgtataatctaatgttgttgcta 38855206  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    ||||||||||||||||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||||||    
T  38855207 atgttatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatactg 38855305  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  38855306 cctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 38855372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 36 - 297
Target Start/End: Original strand, 23760698 - 23760962
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttc---cagtaagactga-tgcttatgaattaatgttgctta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||    ||||||| |||| |   |||||  |||||||| |      
T  23760698 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgttgttgttgttgtttcagtaagcctgaataaatatgatctaatgttgttgt 23760797  T
Q  132 taatgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 228  Q
    ||||| ||||||||||||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||| ||||| ||||||||| ||| ||| |||||    
T  23760798 taatggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgaattcaatattgttatatcatgatgatttacatac 23760896  T
Q  229 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||   |||||||||||||||||    
T  23760897 tgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaa---gttgaagatgatgatgt 23760962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 34 - 281
Target Start/End: Complemental strand, 21285863 - 21285613
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||| | |||||||||  |||| |||| ||||  |||| ||||||| ||||    ||| |  |||| ||| |  ||    
T  21285863 cgagttgatgtgagttgatcttagaggtaagaaactaagtgctttatcttgttgttgttgtttcagtaagcctgaattatataatctaatattgttgtta 21285764  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    ||| ||||||||||||||||||||||||||  || |||||||  |||||   ||| ||||||  ||| |||||| |||||||||  || |||||||||||    
T  21285763 atgatatataattgtatatacattacatgaactatgtttgatgtttgagatgttgttgatttgcatttgatattgttatatcatgttgttttgcatactg 21285664  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  21285663 cctatgttgttgtttgttatttaacaaagctgcatgagtcggtctaagttg 21285613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 34 - 278
Target Start/End: Complemental strand, 20498829 - 20498581
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||| ||||| | ||||||||||||||| |||| |||| ||||| | ||||||||||||  ||||| || |||||| |||||    
T  20498829 cgagttgatgtgagttgatcttggaggtaagaaactaagttgtttatcttgatgttgatgtttcggtaagactgatgtatatgatttgatgttgtttata 20498730  T
Q  134 atgttatataattgtatatacattacatgacttaagtttg-ataattga---gttgctgatttatattcgatattattatatcattatggtttgcatact 229  Q
    |||| ||||||||||||||||||||| ||| |||  | || ||  ||||   |||| ||| ||  ||| |||||| |||||||||  |  ||| ||||||    
T  20498729 atgtgatataattgtatatacattacttgaattatatatgaatgtttgagatgttgatgacttgcatttgatattgttatatcatgctattttacatact 20498630  T
Q  230 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||| ||||||||  | ||||||| ||||||||||||||||||    
T  20498629 gcctatgttgctgtttgtttattaactaagttgcatgagtcggtctaag 20498581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 36 - 281
Target Start/End: Complemental strand, 21673967 - 21673720
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttataa 134  Q
    |||| |||||||||||| |||||||||||||||||||||||| | |||| ||||  |||| |||||||  ||| |   |||||  |||||||| |  |||    
T  21673967 agttaatgtgagttgatattagaggttaaaaactaagttgtt-atcttgttgttgttgtttcagtaagcttgaattaatatgatctaatgttgttgttaa 21673869  T
Q  135 tgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgc 231  Q
    || ||||||||||||||||||||| || | |||  || |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||| |||    
T  21673868 tggtatataattgtatatacattaaataaattatatt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcataatgc 21673770  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||||||||||||||||| ||||| | |||||||||||||||||||||    
T  21673769 ctatgttgttgtttgttatttaactatgatgcatgagtcggtctaagttg 21673720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 17612132 - 17612231
Alignment:
Q  198 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||| |||||| | |||||||||||||||||| |||||||| |||||||||| ||||||    
T  17612132 cgatattattatatcatgatgttttgcatactgcctatgttgttgattgttaattaactaagctgcatgagtcagtctaagtcgttgaagatgttgatgt 17612231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 281
Target Start/End: Original strand, 983257 - 983511
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttacc---ttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctt 130  Q
    ||||||||| |||||||||||| |||||   ||||||||||||||| |   ||| ||||  |||| ||||||| ||||    ||||| | ||||||| |     
T  983257 cgagttgatatgagttgatcttggaggtaggaaactaagttgtttatcatgttgttgttgttgtttcagtaagtctgaattatatgattgaatgttgttg 983356  T
Q  131 ataatgttatataattgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcat 226  Q
    |||||||||||||  |||||||||||||||||| ||| |||||||  | ||| |||| ||| ||  ||| || ||| ||||||||| |  | ||||||||    
T  983357 ataatgttatatagctgtatatacattacatgaattatgtttgatgttgtgatgttgttgaattgcatttgagattgttatatcatgaacttgtttgcat 983456  T
Q  227 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    ||||||||||||| || |||||||| |||||||||||||||||||||||||||||    
T  983457 actgcctatgttgctgattgttatttaactaagctgcatgagtcggtctaagttg 983511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 21396029 - 21396101
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  21396029 atactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 21396101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 21790522 - 21790594
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  21790522 atactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 21790594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 182 - 297
Target Start/End: Complemental strand, 22626850 - 22626736
Alignment:
Q  182 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||| |||||| |||| ||||||||||| ||||  || |||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||    
T  22626850 gttgttgatttgtatttgatattattatgtcatgttgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttg 22626752  T
Q  282 ttgaagatgatgatgt 297  Q
     |||||||||||||||    
T  22626751 atgaagatgatgatgt 22626736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 199 - 297
Target Start/End: Complemental strand, 31971354 - 31971257
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||  || |||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31971354 gatattattatgtcatgttgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 31971257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 21389499 - 21389571
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  21389499 atactacctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 21389571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 21778825 - 21778897
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  21778825 atactacctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 21778897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 219 - 297
Target Start/End: Original strand, 16199687 - 16199765
Alignment:
Q  219 gtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||| |||||| |||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  16199687 gtttgaatactgtctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 16199765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 21919045 - 21919121
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21919045 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 21919121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 290
Target Start/End: Original strand, 13508105 - 13508199
Alignment:
Q  196 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatg 290  Q
    ||||||||||||||||||| ||| | |||||| ||||||||||| || |||||| | |||||||||||||||||| |||||||| ||||||||||    
T  13508105 ttcgatattattatatcatgatgttgtgcatattgcctatgttgctgattgttaattaactaagctgcatgagtcagtctaagtcgttgaagatg 13508199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 290
Target Start/End: Original strand, 13597637 - 13597731
Alignment:
Q  196 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatg 290  Q
    ||||||||||||||||||| ||| ||||||| |||| ||||||| || |||||| | |||||||||||||||||| |||||||| ||||||||||    
T  13597637 ttcgatattattatatcatgatgttttgcattctgcttatgttgctgattgttaattaactaagctgcatgagtcagtctaagtcgttgaagatg 13597731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 7372854 - 7372778
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  7372854 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 7372778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 18818454 - 18818530
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  18818454 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 18818530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 18879276 - 18879352
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  18879276 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 18879352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 23406455 - 23406379
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  23406455 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 23406379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 6759334 - 6759255
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgtcca 300  Q
    |||| ||||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6759334 tttgtatactgcctgtgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgtcca 6759255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 28649094 - 28649164
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatg 296  Q
    ||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  28649094 atactgcctatgttgct-tttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatg 28649164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 226 - 297
Target Start/End: Original strand, 45131047 - 45131117
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||||||||| |||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  45131047 tactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 45131117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 227 - 297
Target Start/End: Original strand, 21923980 - 21924049
Alignment:
Q  227 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  21923980 actgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 21924049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 16092387 - 16092463
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  16092387 tttgtatactgcctgtgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 16092463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 20536284 - 20536208
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||  |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  20536284 tttgtatactgcctatgtttctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 20536208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 278
Target Start/End: Complemental strand, 37116615 - 37116366
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||| ||||| | | ||| | ||||||||||| ||| ||| |||||  |||| ||||||| |||||    |||| || |||||| | |||    
T  37116615 cgagttgatgtgagatgatcatgggggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcctgatttagatgatttgatgttgttaata 37116516  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcatta--tggtttgcatac 228  Q
    |||| ||||| |||||||| |||||||||| |||  | ||||  |||||   ||| ||||||  ||| |||||| ||||||||| |  || |||   |||    
T  37116515 atgtgatatatttgtatatgcattacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgttatatcatgaactgttttatgtac 37116416  T
Q  229 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||||||| ||||||||  | ||||||||||||||||||||||||||    
T  37116415 tgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 37116366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 297
Target Start/End: Complemental strand, 22875162 - 22875065
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||  || |||| ||||||||| ||||| || | | |||| ||||||||||||||||||||||||| ||| |||||||||||||||    
T  22875162 gatattattatgtcatgttgttttgtatactgcctgtgttgctgct-gctatttaactaagctgcatgagtcggtctaaattgatgaagatgatgatgt 22875065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 41598238 - 41598188
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  41598238 ttgttattcaactaagctgcatgagtcggtctaagttgattaagatgatga 41598188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 113 - 278
Target Start/End: Original strand, 17439439 - 17439609
Alignment:
Q  113 tatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattat 209  Q
    ||||| ||||||||| | ||||||| ||||| |||||||| |||||||||| |||  | ||||  |||||   ||| ||||||  ||| |||||| ||||    
T  17439439 tatgatttaatgttgataataatgtgatatatttgtatatgcattacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgttat 17439538  T
Q  210 atcatta--tggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||| |  || |||   |||||||||||||||||||||||  | |||||||||||||||||||| |||||    
T  17439539 atcatgaactgttttatgtactgcctatgttgttgtttgtttattaactaagctgcatgagtcggactaag 17439609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 17267044 - 17267096
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||||||    
T  17267044 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggtctaag 17267096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 1484452 - 1484402
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  1484452 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 1484402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 4542485 - 4542535
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  4542485 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 4542535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 5853404 - 5853454
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  5853404 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 5853454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 14409556 - 14409606
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  14409556 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 14409606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 19896315 - 19896265
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  19896315 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 19896265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 20046307 - 20046357
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  20046307 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 20046357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 20403277 - 20403227
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  20403277 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 20403227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 22001803 - 22001753
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  22001803 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 22001753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 26225359 - 26225409
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  26225359 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 26225409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 19937118 - 19937174
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgtcca 300  Q
    |||||||| |||||||||||||||||||||| |||||| | |||||||||| |||||    
T  19937118 ttgttatttaactaagctgcatgagtcggtccaagttgattaagatgatgaagtcca 19937174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 24353091 - 24353039
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||||||| ||||||||  | ||||||||||||||||||||||||||    
T  24353091 tactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 24353039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 4483330 - 4483281
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  4483330 ttgttatt-aactaagctgcatgagtcggtctaagttgattaagatgatga 4483281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 15203343 - 15203393
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||| ||||||||| | ||||||||||    
T  15203343 ttgttatttaactaagctgcatgagtcgctctaagttgattaagatgatga 15203393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 16413428 - 16413474
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatg 290  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||    
T  16413428 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatg 16413474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 26219767 - 26219717
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | | ||||||||    
T  26219767 ttgttatttaactaagctgcatgagtcggtctaagttgattatgatgatga 26219717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 45290807 - 45290853
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatg 290  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||    
T  45290807 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatg 45290853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 281
Target Start/End: Complemental strand, 15070608 - 15070571
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||||| |||||||||||||||||||||||||||||    
T  15070608 ttgttatttaactaagctgcatgagtcggtctaagttg 15070571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 19154936 - 19154989
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||||||||||| ||||||||  | ||||||||||||||||||||| ||||    
T  19154936 atactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtttaag 19154989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 276
Target Start/End: Complemental strand, 22525628 - 22525579
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 276  Q
    ||||||||| |||||||||  ||||| ||||||||||||||||||||||||    
T  22525628 tactgcctaagttgttgttgtttatt-aactaagctgcatgagtcggtcta 22525579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 25484380 - 25484430
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| |||||||||||| |||| ||||||||||| | ||||||||||    
T  25484380 ttgttatttaactaagctgcacgagttggtctaagttgattaagatgatga 25484430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 239; Significance: 1e-132; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 19660690 - 19660956
Alignment:
Q  31 gttcgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctt 130  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19660690 gttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctt 19660789  T
Q  131 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||  |||||||||||||||    
T  19660790 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgttgatttatattcgatatcattatatcaagatggtttgcatactg 19660889  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19660890 cctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 19660956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 36 - 293
Target Start/End: Original strand, 22959392 - 22959649
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataat 135  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||| ||||  |||||||||||||||||||| ||||||| ||||||| ||| |||    
T  22959392 agttgatgtgagttgatcttagaggttaaaaaccaagttgtttatcttgttgtttttgttccagtaagactgatgcatatgaatcaatgttggttaaaat 22959491  T
Q  136 gttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctat 235  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||  |||| ||||| ||||||||| ||| ||||||||||||||||    
T  22959492 gttatataattgtatatacattacatgacttatgtttgatatttgagttgttgatttgcattcaatattgttatatcatgatgatttgcatactgcctat 22959591  T
Q  236 gttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  22959592 gttgctgtttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 22959649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 36 - 297
Target Start/End: Complemental strand, 19669161 - 19668898
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaat--taatgttgcttata 133  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||| ||||  |||||||||||||||||||| |||||||  | |||||| |||||    
T  19669161 agttgatgtgagttgatcttagaggttagaaactaagtcgtttatcttgttgttgttgttccagtaagactgatgcatatgaatattgatgttgtttata 19669062  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcct 233  Q
    ||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||||||  |||||||||| ||||||||  ||| ||||||||||| ||    
T  19669061 atgttatataattgtatatacattacaggacttatgtttgatatttgagttgttgatttgcattcgatattgttatatcacgatgatttgcatactgtct 19668962  T
Q  234 atgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||||||||||||| |||| ||||||| |||||||||||||||| ||| |||||||||||    
T  19668961 atgttgttgtttgttatttaactgagctgcaagagtcggtctaagttgatgatgatgatgatgt 19668898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 34 - 293
Target Start/End: Complemental strand, 21565808 - 21565546
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||  ||||| |||||||||||||| |||||||| |||||| |||||    
T  21565808 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgttgttgttgttctagtaagactgatgcatatgaattgatgttgtttata 21565709  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||   |||| ||| ||  |||||||||| ||||||||| ||| |||| ||||||    
T  21565708 atgttatataattgtatatacattacatgaattatgtttgatatttgaaatgttgatgacttgcattcgatattgttatatcatgatgatttggatactg 21565609  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  21565608 cctatgttgctatttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 21565546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 34 - 297
Target Start/End: Original strand, 21329352 - 21329618
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| |||| ||||  |||| ||||||| ||||    ||| |  |||||||| |  ||    
T  21329352 cgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgttgttgttgtttcagtaagcctgaattgtataatctaatgttgttgcta 21329451  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||||||||||||||||||||||| ||| |||||||  ||  || |||| ||| ||  |||||||||| |||||| || ||| |||||||||||    
T  21329452 atgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttgatgacttgaattcgatattgttatattatgatgatttgcatactg 21329551  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  21329552 cctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 21329618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 34 - 297
Target Start/End: Original strand, 21502009 - 21502277
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggtta-aaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgctta 131  Q
    ||||||||||| |||||||||| || |||| |||||||||||||||| |||||||||  |||| ||||||| |||| |   |||||  |||||||| |      
T  21502009 cgagttgatgttagttgatcttggaagttagaaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattaatatgatctaatgttgttgt 21502108  T
Q  132 taatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatac 228  Q
    |||||||||||||||||||||||||||||||| ||| |||||||  || || || ||||   ||  |||||||||| |||||||||  || ||| |||||    
T  21502109 taatgttatataattgtatatacattacatgaattatgtttgatgtttaagatgatgatgacttgcattcgatattgttatatcatgctgatttacatac 21502208  T
Q  229 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||||||  | ||||||||||||||||||||||||||||| | |||||||||||||    
T  21502209 tgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 21502277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 34 - 297
Target Start/End: Original strand, 26011890 - 26012154
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||| |||| | ||  |||| ||||||| ||||    ||| |  | |||||| |  |     
T  26011890 cgagttgatgtgagttgatcttggaggttagaaactaagttgtttatcttgttattgttgtttcagtaagcctgaactatataatctgatgttgttgttg 26011989  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||||||||||||||||||||||| ||| |||||||  |||||   ||| ||||| | ||| |||||| |||||||||  || |||||||||||    
T  26011990 atgttatataattgtatatacattacatgaattatgtttgatgtttgagatgttgttgattcacatttgatattgttatatcatgttgctttgcatactg 26012089  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||| ||||||||  | |||||||||||||||||||||||||||||   |||||||||||||    
T  26012090 cctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagttg--aaagatgatgatgt 26012154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 34 - 278
Target Start/End: Original strand, 20026795 - 20027043
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    ||||| |||||||||||||||||||||| | ||||||||||||||| |||| |||   |||| ||||||| ||||    ||||  ||||||||| | |||    
T  20026795 cgagtcgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgttgtagttgtttcagtaagcctgaattatatgttttaatgttgttgata 20026894  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcatact 229  Q
    ||| |||||| ||||||||||||||||||| ||| |||||||  | ||| |||| ||| ||  ||| |||||||||||||||| |  || |||| |||||    
T  20026895 atgctatatagttgtatatacattacatgaattatgtttgatgttgtgatgttgttgaattgcatttgatattattatatcatgaactgttttggatact 20026994  T
Q  230 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  20026995 gcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaag 20027043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 196 - 297
Target Start/End: Complemental strand, 36314678 - 36314577
Alignment:
Q  196 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgat 295  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  36314678 ttcgatattattatatcatgatggtttgcatactacctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgat 36314579  T
Q  296 gt 297  Q
    ||    
T  36314578 gt 36314577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 21729109 - 21729185
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21729109 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 21729185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 21808434 - 21808510
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21808434 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 21808510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 25421608 - 25421532
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  25421608 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 25421532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 220 - 294
Target Start/End: Complemental strand, 24529296 - 24529223
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  24529296 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatga 24529223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 8286888 - 8286964
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  8286888 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 8286964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 21997579 - 21997655
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  21997579 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 21997655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 23390541 - 23390617
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| |||||| |||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  23390541 tttgtatactgtctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 23390617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 297
Target Start/End: Original strand, 21293020 - 21293090
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||||||||| |||| |||||| ||||||||||||||| |||||||||| ||||||||||||||||||    
T  21293020 tactgcctatgttgctgtt-gttatttaactaagctgcatgaatcggtctaagatgttgaagatgatgatgt 21293090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 278
Target Start/End: Complemental strand, 22144147 - 22144068
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||| |||||||||  || |||||||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  22144147 gatattgttatatcatgttgttttgcatactacctatgttgatgtctgttatttaactaagctgcatgagtcggtctaag 22144068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 297
Target Start/End: Complemental strand, 40725952 - 40725853
Alignment:
Q  198 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||| ||| ||||||||||||||| |||| || |  |||   |||||||||||||||||||||| |||| |||||||||| ||||||    
T  40725952 cgatattattatatcatgatgctttgcatactgcctacgttgctgatcattaactaactaagctgcatgagtcggtccaagtcgttgaagatgttgatgt 40725853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 297
Target Start/End: Complemental strand, 24493666 - 24493569
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||  || |||| ||||||||||||||| | || |||| | ||| ||||||||||||||||||||||||| |||||||||||||||    
T  24493666 gatattattatgtcatgctgttttgtatactgcctatgttgctatt-gttacttaaccaagctgcatgagtcggtctaagttgatgaagatgatgatgt 24493569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 1096543 - 1096467
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||||| ||| ||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||| ||||||    
T  1096543 tttgcatactacctgtgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgttgatgt 1096467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 13025387 - 13025311
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| | || |||||| ||||| ||||||||||||||||||||||| |||||||||||||||    
T  13025387 tttgtatactgcctatgttgctatt-gttatttaactatgctgcatgagtcggtctaagttgatgaagatgatgatgt 13025311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 13095571 - 13095495
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| | || |||||| ||||| ||||||||||||||||||||||| |||||||||||||||    
T  13095571 tttgtatactgcctatgttgctatt-gttatttaactatgctgcatgagtcggtctaagttgatgaagatgatgatgt 13095495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 290
Target Start/End: Complemental strand, 37723975 - 37723910
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatg 290  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||||| ||||||| |||||||||||    
T  37723975 atactgcctatgttgctgtctgttatttaactaagctgcatgagtcagtctaagatgttgaagatg 37723910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 9078023 - 9077952
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||| |||| |||||| |||||||||||||| ||| |||||||||| |||||||||||||||    
T  9078023 atactgcctatgttgctgtt-gttatttaactaagctgcatgggtcagtctaagttgatgaagatgatgatgt 9077952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 294
Target Start/End: Complemental strand, 22412281 - 22412187
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    ||||||||||| ||||  || |||| ||||||||||||||||| |  |||||| ||||||||| ||||||||||||||||||| | ||||||||||    
T  22412281 gatattattatgtcatgctgttttgtatactgcctatgttgttatc-gttatttaactaagctacatgagtcggtctaagttgattaagatgatga 22412187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 36314719 - 36314672
Alignment:
Q  129 ttataatgttatataattgtatatacattacatgacttaagtttgata 176  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36314719 ttataatgttatataattgtatatacattacatgacttaagttcgata 36314672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 22075095 - 22075018
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaag-atgatgatgt 297  Q
    |||| ||||| ||||||||| |||| |||||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  22075095 tttgtatacttcctatgttgctgtt-gttatttaactaagctgaatgagtcggtctaagttgttgaagaatgatgatgt 22075018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 278
Target Start/End: Original strand, 22178074 - 22178323
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||| | | ||| | ||||||||||| ||| ||| |||||  |||| ||||||  || |    ||||| |  |||||| | |||    
T  22178074 cgagttgatgtgagttgatcatgggggtaagaaactaagttgcttatcttactgttgttgtttcagtaaacctaaattatatgattggatgttgttaata 22178173  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcatta--tggtttgcatac 228  Q
    |||| |||||| ||||||| |||||||||| |||  | ||||  |||||   ||| ||||||  ||| |||||| | ||||||| |  || |||  ||||    
T  22178174 atgtgatataaatgtatatgcattacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgtcatatcatgagctgttttatatac 22178273  T
Q  229 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||||||||||||||||  | ||||||| ||||||||||||||||||    
T  22178274 tgcctatgttgttgtttgtttattaactaagttgcatgagtcggtctaag 22178323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 20909063 - 20909012
Alignment:
Q  243 tttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    ||||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  20909063 tttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 20909012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 264880 - 264930
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  264880 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 264930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 2154726 - 2154776
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  2154726 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 2154776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 10733052 - 10733102
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  10733052 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 10733102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 11581311 - 11581361
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  11581311 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 11581361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 20918060 - 20918110
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  20918060 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 20918110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 29329984 - 29329934
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  29329984 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 29329934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 36154892 - 36154942
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  36154892 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 36154942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 38619484 - 38619434
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  38619484 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 38619434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 39245186 - 39245136
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  39245186 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 39245136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 39363434 - 39363384
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  39363434 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 39363384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 23064561 - 23064512
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||    
T  23064561 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatg 23064512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 25431470 - 25431395
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| ||||||| ||||||||||||||||| ||  |||||||||||||||    
T  25431470 tttgtatactgcctatgttgctgtt-gttatttaactaagatgcatgagtcggtctaa-tttatgaagatgatgatgt 25431395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 10775790 - 10775838
Alignment:
Q  246 gttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  10775790 gttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 10775838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 21741400 - 21741455
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgtt 89  Q
    |||||||||||||||||||||| ||||||| ||||||||||  |||||||| ||||    
T  21741400 cgagttgatgtgagttgatcttggaggttagaaactaagttaattaccttgatgtt 21741455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 29346030 - 29345980
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| |||||||||| |||||||||||||||||| | ||||||||||    
T  29346030 ttgttatttaactaagctgtatgagtcggtctaagttgattaagatgatga 29345980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 31061118 - 31061068
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||| ||||||||||||||||||||| | ||||||||||    
T  31061118 ttgttatttaactaagttgcatgagtcggtctaagttgattaagatgatga 31061068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 42245477 - 42245527
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||| ||||||||||||||||||||| | ||||||||||    
T  42245477 ttgttatttaactaagttgcatgagtcggtctaagttgattaagatgatga 42245527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 281
Target Start/End: Original strand, 20902121 - 20902158
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||||| |||||||||||||||||||||||||||||    
T  20902121 ttgttatttaactaagctgcatgagtcggtctaagttg 20902158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 291
Target Start/End: Original strand, 18319146 - 18319193
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatga 291  Q
    |||||||| ||||||||||||||||||||| ||||||| | |||||||    
T  18319146 ttgttatttaactaagctgcatgagtcggtttaagttgattaagatga 18319193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 294
Target Start/End: Complemental strand, 29348500 - 29348453
Alignment:
Q  247 ttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    ||||| |||||||||| |||||||||||||||||| | ||||||||||    
T  29348500 ttatttaactaagctgtatgagtcggtctaagttgattaagatgatga 29348453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 294
Target Start/End: Complemental strand, 29350973 - 29350926
Alignment:
Q  247 ttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    ||||| |||||||||| |||||||||||||||||| | ||||||||||    
T  29350973 ttatttaactaagctgtatgagtcggtctaagttgattaagatgatga 29350926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 32027451 - 32027393
Alignment:
Q  235 tgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||||| |||||| ||||||| || |||||||||||||||||| | ||||||||||    
T  32027451 tgttgttgtt-gttatttaactaagttgtatgagtcggtctaagttgattaagatgatga 32027393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 20806854 - 20806904
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| || ||||||||||||||||||||| |||| | ||||||||||    
T  20806854 ttgttatttaattaagctgcatgagtcggtctatgttgattaagatgatga 20806904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 26732884 - 26732937
Alignment:
Q  227 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    ||||||||||||| ||||  ||||| |||||||||||||||||||||||| ||||    
T  26732884 actgcctatgttgctgttgtttatt-aactaagctgcatgagtcggtctatgttg 26732937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 26704124 - 26704075
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||| ||| ||||||||||||||||||||||| | | |||||||||    
T  26704124 ttgttatttaaccaagctgcatgagtcggtctaagtcgatcaagatgatg 26704075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 26973857 - 26973808
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||| ||| ||||||||||||||||||||||| | | |||||||||    
T  26973857 ttgttatttaaccaagctgcatgagtcggtctaagtcgatcaagatgatg 26973808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 32 - 297
Target Start/End: Complemental strand, 34201051 - 34200786
Alignment:
Q  32 ttcgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctta 131  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34201051 ttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgtcccagtaagactgatgcttatgaattaatgttgctta 34200952  T
Q  132 taatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgc 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  34200951 taatgttatataattgtatatacattacatgacttaagtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactgc 34200852  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34200851 ctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 34200786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 28505153 - 28505419
Alignment:
Q  31 gttcgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctt 130  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  28505153 gttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgttgtcaatgttccagtaagactgatgcttatgaattaatgttgctt 28505252  T
Q  131 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  28505253 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatatccgatattattatatcatgatggtttgcatactg 28505352  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  28505353 cctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagatgatgaagatgatgatgt 28505419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 31 - 297
Target Start/End: Original strand, 11995882 - 11996148
Alignment:
Q  31 gttcgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctt 130  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11995882 gttcgagttgatgtgagtttatcttagaggttagaaactaatttgtttaccttgctgttaatgtcccagtaagactgatgcttatgaattaatgttgctt 11995981  T
Q  131 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||| ||||||||||||||| |||||||||||||||    
T  11995982 ataatgttatataattgtatatacattacatgacttaagtttgatatttgagttgttgatttacattcaatattattatatcatgatggtttgcatactg 11996081  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||    
T  11996082 cctatgttgttgtttgttaattaactaagatgcatgagtcggtctaagttgttgaagatgatgatgt 11996148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 34 - 297
Target Start/End: Original strand, 15754744 - 15755008
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaatt-aatgttgcttat 132  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||| |||||||| ||||||||||||    
T  15754744 cgagttgatgtgagttgatcctagaggttagaaactaagttgtttatcttgctgttaatattccagtaagactgatgcatatgaatttaatgttgcttat 15754843  T
Q  133 aatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcc 232  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||  |||||||||||||||||||| |||||||||||||| ||    
T  15754844 aatgttatataattgtatatacattacatgacttatgtttgatatttgagttgttgatttgcattcgatattattatatcatgatggtttgcatactacc 15754943  T
Q  233 tatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||| ||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  15754944 tatattgttatttgttatttaactaagctgcatgagtcagtctaagttgttgaagatgatgatgt 15755008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 129 - 297
Target Start/End: Complemental strand, 16495570 - 16495402
Alignment:
Q  129 ttataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatac 228  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  16495570 ttataatgttatataattgtatatacattacatgacttaagtctgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatac 16495471  T
Q  229 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  16495470 tgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 16495402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 36 - 297
Target Start/End: Complemental strand, 68008 - 67745
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttataa 134  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||  |||| |||| || |||| |   |||||  |||||||| |  |||    
T  68008 agttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgtttcagtgagcctgaattaatatgatctaatgttgttgttaa 67909  T
Q  135 tgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgc 231  Q
    |||||||||||||||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||||||||||||    
T  67908 tgttatataattgtatatacattatatgaattatgtt-gata-ttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatactgc 67811  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  67810 ctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 67745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 38 - 293
Target Start/End: Complemental strand, 44014434 - 44014182
Alignment:
Q  38 ttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttataatg 136  Q
    ||||||||||||||||  |||||||||||||||||||||| | |||||||||  |||| ||||||| |||| |   |||||  |||||||| || |||||    
T  44014434 ttgatgtgagttgatc--agaggttaaaaactaagttgtt-atcttgctgttgttgtttcagtaagcctgaattaatatgatctaatgttgtttttaatg 44014338  T
Q  137 ttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatg 236  Q
     ||||||| ||||||||||||| |||| ||| ||| |||| ||||| || ||||||  |||||||||| ||||||||| ||| |||||||||||||||||    
T  44014337 gtatataactgtatatacattatatgaattatgtt-gatatttgagatgttgatttgcattcgatattgttatatcatgatgatttgcatactgcctatg 44014239  T
Q  237 ttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  44014238 ttgttgtttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 44014182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 36 - 297
Target Start/End: Original strand, 16219574 - 16219835
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataat 135  Q
    ||||||||| |||||||||| ||||||| ||||||||||||||| |||||||||  |||| ||||||| ||||    ||| |  |||||||| |  ||||    
T  16219574 agttgatgttagttgatcttggaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattatataatctaatgttgttgttaat 16219673  T
Q  136 gttatataattgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactgcc 232  Q
    |||||||||||||||||||||||||||| ||| |||||||  || || || ||||   ||  |||||||||| ||||||||| ||| |||||||||||||    
T  16219674 gttatataattgtatatacattacatgaattatgtttgatgtttaagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactgcc 16219773  T
Q  233 tatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||   |||||||||||||||||    
T  16219774 tatgttgttgtttgttatttaactaagctacatgagtcggtctaa---gttgaagatgatgatgt 16219835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 36 - 293
Target Start/End: Complemental strand, 18005910 - 18005650
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgct-tatgaattaatgttgcttataa 134  Q
    ||||||| |||||||||||||||||||| ||||||||||||||| |||||||||  |||| ||||||| |||||    |||||  |||||||| |  |||    
T  18005910 agttgatatgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgatttaatatgatctaatgttgttgttaa 18005811  T
Q  135 tgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgc 231  Q
    || ||||||||||||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||| ||||||||    
T  18005810 tggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttccatactgc 18005712  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
     ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  18005711 ttatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 18005650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 34 - 297
Target Start/End: Complemental strand, 47832073 - 47831807
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||| ||||||| |||||||||| |||| |||| ||||  |||| ||||||| ||||    ||| |  ||||||||    ||    
T  47832073 cgagttgatgtgagttgatcttggaggttagaaactaagttatttatcttgttgttgttgtttcagtaagcctgaattgtataatctaatgttgtcgcta 47831974  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    ||||||||||||||||||||||||| |||| ||| |||||||  ||  || |||| ||| ||  |||||||||| ||||||||| ||| | |||||||||    
T  47831973 atgttatataattgtatatacattatatgaattatgtttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgatgatatgcatactg 47831874  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  47831873 tctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 47831807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 36 - 293
Target Start/End: Original strand, 810988 - 811248
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataat 135  Q
    |||||||||||||||| ||| || |||| |||||||||| |||| |||||||||   ||| ||||||| ||||    ||| |  |||||||| |  ||||    
T  810988 agttgatgtgagttgaccttggaagttagaaactaagttatttatcttgctgttgtagtttcagtaagcctgaattgtataatctaatgttgttgctaat 811087  T
Q  136 gttatataattgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatactgcc 232  Q
    |||||||||||||||||||||||||||| ||| |||||||  ||  || |||  ||| ||  |||||||||| ||||||||| ||| |||||||||||||    
T  811088 gttatataattgtatatacattacatgaattatgtttgatgtttatgatgttaatgacttgcattcgatattgttatatcatgatgatttgcatactgcc 811187  T
Q  233 tatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  811188 tatgttgctatttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 811248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 34 - 281
Target Start/End: Complemental strand, 16056593 - 16056344
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| |||| ||||  |||| | ||||| ||||    ||| |  |||||||| |  ||    
T  16056593 cgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgatgttgttgtttcggtaagcctgaatgatataatctaatgttgttgtta 16056494  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||||||||||||||||||||||| ||| |||||||  |||||   ||| ||||||  ||| |||||| |||||||||  || |||||||| ||    
T  16056493 atgttatataattgtatatacattacatgaattatgtttgatgtttgagatgttgttgatttgcatttgatattgttatatcatgttg-tttgcataatg 16056395  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
     |||||||| ||||||||||| ||||||| ||||| |||||||||||||||    
T  16056394 tctatgttgctgtttgttatttaactaaggtgcatcagtcggtctaagttg 16056344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 34 - 297
Target Start/End: Complemental strand, 22073181 - 22072913
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    ||||||||||||||||||||||| |||| |  |||||||||||||  |||| ||||  |||| ||||||| ||||    ||| |  |||||||| |  ||    
T  22073181 cgagttgatgtgagttgatcttacaggtaaggaactaagttgtttgtcttgatgttgttgtttcagtaagcctgaattatataatctaatgttgttgtta 22073082  T
Q  134 atgttatataattgtatatacattacatga-cttaagtttgataattga---gttgctgatttatattcgatattattatatcattatgg-tttgcatac 228  Q
    |||||||||||||| |||||||||||||||  ||| |||||||  ||||   |||| ||| ||| ||| |||||| |||||||||  ||| ||||||||     
T  22073081 atgttatataattgcatatacattacatgagtttatgtttgatgtttgagatgttgttgacttacatttgatattgttatatcatgctggttttgcatag 22072982  T
Q  229 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||||||||| |||||||||||||| ||| |||||||||| | |||||||||||||    
T  22072981 tgcctatgttgttgtttgttatttaactaagctgcatgggtcagtctaagttgattaagatgatgatgt 22072913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 15113209 - 15113084
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| | |||||||| |||| |||||||||||||   ||||| || |||||  |||||    
T  15113209 cgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcctgctgttattgtttcagtaagactgatttatatgagttgatgttaattata 15113110  T
Q  134 atgttatataattgtatatacattac 159  Q
    |||| ||||||||||||||| |||||    
T  15113109 atgtgatataattgtatatatattac 15113084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 15116746 - 15116621
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| | | |||||| |||| ||||||||||||||  ||||| || |||||  |||||    
T  15116746 cgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcctactgttattgtttcagtaagactgatgtatatgagttgatgttatttata 15116647  T
Q  134 atgttatataattgtatatacattac 159  Q
    |||| ||||||||||||||| |||||    
T  15116646 atgtgatataattgtatatatattac 15116621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 16386292 - 16386369
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16386292 tttgtatactgcctatgtcgttgtttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 16386369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 34 - 278
Target Start/End: Original strand, 20220044 - 20220290
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||| |||||  || ||| | ||||||||||| ||| ||| |||||  |||||||||||| |||||    |||| || |||||| | |||    
T  20220044 cgagttgatgtgaggtgatcacaggggtaagaaactaagttgcttatcttactgttgttgttccagtaagcctgatttagatgatttgatgttgttaata 20220143  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcatta--tggtttgcatactgc 231  Q
    |||| |||||||||||||| |||||||||| |||  | ||||  ||||| || ||||||  ||| |||||| ||||||||| |  || |||   ||||||    
T  20220144 atgtgatataattgtatatgcattacatgaattatatatgatgtttgagatgttgatttgcatttgatattgttatatcatgaactgttttatgtactgc 20220243  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||||||||||  | |||||||||| |||||||||||||||    
T  20220244 ctatgttgttgtttgtttattaactaagctgtatgagtcggtctaag 20220290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 281
Target Start/End: Complemental strand, 12901594 - 12901339
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggt---taa-aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgct 129  Q
    |||||||||||||||||||||| |||||   ||  ||||||||||||||| |||| ||||  |||| |||||||  |||    ||||| ||||||||| |    
T  12901594 cgagttgatgtgagttgatcttggaggtacgtaggaaactaagttgtttatcttgttgttgttgtttcagtaagcttgaattatatgatttaatgttgtt 12901495  T
Q  130 tataatgttatataattgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgca 225  Q
      |||||||||||| ||||||||||||||||||| ||| || ||||  | ||| ||||||| |||  ||| |||||| ||||||||| |  |  |||| |    
T  12901494 gttaatgttatatagttgtatatacattacatgaattatgtatgatgttgtgatgttgctgttttgcatttgatattgttatatcatgaattattttgta 12901395  T
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||| |||||||    
T  12901394 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggtttaagttg 12901339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 297
Target Start/End: Original strand, 2280125 - 2280238
Alignment:
Q  182 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||| ||||||  ||| ||||||||||||||||  || |||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  2280125 gttgttgatttgcatttgatattattatatcatgctgttttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggtctaagttg 2280224  T
Q  282 ttgaagatgatgatgt 297  Q
       |||||||||||||    
T  2280225 --aaagatgatgatgt 2280238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 12698907 - 12698831
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  12698907 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 12698831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 13647401 - 13647325
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||| ||||||| ||||||||||    
T  13647401 tttgcatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagatgttgaatatgatgatgt 13647325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 19486766 - 19486865
Alignment:
Q  198 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||| ||| |||||||||||||||||||| || |  |||   |||||||||||||||||||||| |||| |||||||||| ||||||    
T  19486766 cgatattattatatcatgatgttttgcatactgcctatgttgctgatcattaactaactaagctgcatgagtcggtccaagtcgttgaagatgttgatgt 19486865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 3564409 - 3564482
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  3564409 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatga 3564482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 227 - 297
Target Start/End: Original strand, 27847881 - 27847951
Alignment:
Q  227 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||| ||||| ||||| ||||||||||||||| |||||||||| ||||||||||||||||||    
T  27847881 actgcctatgttgctgtttattatttaactaagctgcatgaatcggtctaagatgttgaagatgatgatgt 27847951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 199 - 297
Target Start/End: Complemental strand, 38227578 - 38227481
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||  || |||| ||||||||||||||| | || |||||| ||||||||||||||||||||||||||| | |||||||||||||||    
T  38227578 gatattattatgtcatgctgttttgtatactgcctatgttgctatt-gttatttaactaagctgcatgagtcggtctaagtagatgaagatgatgatgt 38227481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 10063838 - 10063939
Alignment:
Q  196 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgat 295  Q
    ||||||||||||||||||| ||| | ||||||| |||||||||| || |||||| | ||||||| |||||||||| |||||||| ||||||| || ||||    
T  10063838 ttcgatattattatatcatgatgttgtgcataccgcctatgttgctgattgttaattaactaagttgcatgagtcagtctaagtcgttgaaggtgttgat 10063937  T
Q  296 gt 297  Q
    ||    
T  10063938 gt 10063939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 295
Target Start/End: Complemental strand, 40443462 - 40443393
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgat 295  Q
    |||||| ||||||| ||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||    
T  40443462 tactgcgtatgttgctgtttgttatttaactaagctgcacgagtcggtctaagatgttgaagatgatgat 40443393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 9509260 - 9509189
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||  |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  9509260 atactgcctatgttactgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 9509189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 10589115 - 10589039
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||| ||||||| |||| |||||| ||||||||||||||||||| |||||||||| ||||||||||||||    
T  10589115 tttgtatactgcatatgttgctgtt-gttatttaactaagctgcatgagtcgatctaagttgtcgaagatgatgatgt 10589039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 16324270 - 16324197
Alignment:
Q  35 gagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga 108  Q
    ||||||||||||||||||||||||||||| ||||||||||||| | |||||||||  |||| ||||||| ||||    
T  16324270 gagttgatgtgagttgatcttagaggttagaaactaagttgttgatcttgctgttgttgtttcagtaagcctga 16324197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 12255837 - 12255892
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 275  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  12255837 tttgcatactgactatgttgttgtttgttatttaactaagctgcatgagtctgtct 12255892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 294
Target Start/End: Original strand, 18456436 - 18456530
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    ||||||||||| ||||  || |||| ||||||||||||||| | |  |||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  18456436 gatattattatgtcatgttgttttgtatactgcctatgttgctatc-gttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 18456530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 26212072 - 26211995
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaag-atgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| ||||||| || |||||||||||||||||||||||| ||||||||||    
T  26212072 tttgtatactgcctatgttgctgtt-gttatttaactaagttgtatgagtcggtctaagttgttgaagaatgatgatgt 26211995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 18430762 - 18430709
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  18430762 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 18430709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 1868044 - 1868100
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||||||||||||||||| |||  | |||||||||||||||||||||||||||||    
T  1868044 atactgcctatgttgttgttagtttattaactaagctgcatgagtcggtctaagttg 1868100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 294
Target Start/End: Original strand, 17061909 - 17062077
Alignment:
Q  129 ttataatgttatataattgtatatacattacatgacttaagt-ttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgc 224  Q
    ||||| ||| |||||||||||||| |||||| ||| |||  | || |||||||||   ||||||| ||  ||| ||||||||||| ||||  |  ||||     
T  17061909 ttatattgtgatataattgtatatgcattacttgaattatatgttaataattgagacgttgctgacttgcatttgatattattatgtcatgctattttgt 17062008  T
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||  | |||| || |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  17062009 atactgctga-gttgctgattgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 17062077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 456371 - 456321
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  456371 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 456321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 3386383 - 3386333
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  3386383 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 3386333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 11972546 - 11972496
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  11972546 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 11972496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 13869396 - 13869346
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  13869396 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 13869346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 14949234 - 14949284
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  14949234 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 14949284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 15376825 - 15376875
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  15376825 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 15376875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 16213734 - 16213684
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  16213734 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 16213684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 16232570 - 16232520
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  16232570 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 16232520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 16410109 - 16410059
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  16410109 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 16410059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 18640322 - 18640272
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  18640322 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 18640272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 20110606 - 20110556
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  20110606 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 20110556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 20385235 - 20385285
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  20385235 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 20385285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 21189707 - 21189757
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  21189707 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 21189757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 24702288 - 24702238
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  24702288 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 24702238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 24704738 - 24704688
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  24704738 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 24704688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 32125541 - 32125491
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  32125541 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 32125491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 41522967 - 41522917
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  41522967 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 41522917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 41525429 - 41525379
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  41525429 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 41525379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 294
Target Start/End: Complemental strand, 48273465 - 48273392
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||| ||||||||| ||||| |||| |||||| ||||||||||||| ||||||||||||||| | ||||||||||    
T  48273465 tttgtatactgcctgtgttgctgtt-gttatttaactaagctgcataagtcggtctaagttgattaagatgatga 48273392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 11393399 - 11393448
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||    
T  11393399 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatg 11393448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 281
Target Start/End: Complemental strand, 14044935 - 14044762
Alignment:
Q  113 tatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatat---tcgatattattat 209  Q
    ||||| ||||||||  | ||||||||||||| ||||||||||||||||||| |||  | ||||  ||||| || ||||| || |   | |||||| ||||    
T  14044935 tatgatttaatgtttttgataatgttatatagttgtatatacattacatgaattatatatgatgtttgagatgttgattgatttgtattgatattgttat 14044836  T
Q  210 atcatta--tggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    ||||  |  || |||   |||||||||||||| | ||||||  | |||||||||||||||||||||||||||||    
T  14044835 atcaggagctgttttatgtactgcctatgttgctttttgtttattaactaagctgcatgagtcggtctaagttg 14044762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 281
Target Start/End: Complemental strand, 14354965 - 14354792
Alignment:
Q  113 tatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatat---tcgatattattat 209  Q
    ||||| ||||||||  | ||||||||||||| ||||||||||||||||||| |||  | ||||  ||||| || ||||| || |   | |||||| ||||    
T  14354965 tatgatttaatgtttttgataatgttatatagttgtatatacattacatgaattatatatgatgtttgagatgttgattgatttgtattgatattgttat 14354866  T
Q  210 atcatta--tggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    ||||  |  || |||   |||||||||||||| | ||||||  | |||||||||||||||||||||||||||||    
T  14354865 atcaggagctgttttatgtactgcctatgttgctttttgtttattaactaagctgcatgagtcggtctaagttg 14354792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 13831431 - 13831373
Alignment:
Q  235 tgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||||| |||||| ||||||||||||||||||||||||| ||| | ||||||||||    
T  13831431 tgttgttgtt-gttatttaactaagctgcatgagtcggtctaaattgattaagatgatga 13831373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 48991280 - 48991206
Alignment:
Q  199 gatattattatatc--attatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcg 271  Q
    ||||||||||||||  | |||| |||  ||||||||||||||||||||||||  | |||||||||||||||||||    
T  48991280 gatattattatatctgaatatgttttatatactgcctatgttgttgtttgtttattaactaagctgcatgagtcg 48991206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 24275221 - 24275175
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatg 290  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||    
T  24275221 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatg 24275175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 27216910 - 27216860
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||| ||||||||||| | ||||||||||    
T  27216910 ttgttatttaactaagctgcatgagttggtctaagttgattaagatgatga 27216860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 44116559 - 44116509
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||| ||||||||||||||||||||||||| | ||||||||||    
T  44116559 ttgttatttaaccaagctgcatgagtcggtctaagttgattaagatgatga 44116509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 274
Target Start/End: Original strand, 15008548 - 15008597
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 274  Q
    ||||| ||||||||||||||||||  | ||||||||||||||||||||||    
T  15008548 atactacctatgttgttgtttgtttattaactaagctgcatgagtcggtc 15008597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 281
Target Start/End: Original strand, 15144105 - 15144142
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||||| |||||||||||||||||||||||||||||    
T  15144105 ttgttatttaactaagctgcatgagtcggtctaagttg 15144142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 9177718 - 9177766
Alignment:
Q  228 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 276  Q
    |||| ||||||||||||| ||||| || |||||||||||||||||||||    
T  9177718 ctgcatatgttgttgtttattattgaattaagctgcatgagtcggtcta 9177766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 9389552 - 9389592
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagtt 74  Q
    |||||||||||||||||||||| ||||||| ||||||||||    
T  9389552 cgagttgatgtgagttgatcttggaggttagaaactaagtt 9389592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 38898489 - 38898535
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatg 290  Q
    |||||||| ||||||||||||||||||||| ||||||| | ||||||    
T  38898489 ttgttatttaactaagctgcatgagtcggtttaagttgattaagatg 38898535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 18203882 - 18203831
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||| |||||||||||||  ||||| ||||||||||||||||||| ||||||    
T  18203882 tactgtctatgttgttgttgtttatt-aactaagctgcatgagtcgatctaag 18203831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 227; Significance: 1e-125; HSPs: 4)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 11558 - 11292
Alignment:
Q  31 gttcgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctt 130  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  11558 gttcgagttgatgtgagttaatcttagaggttagaaactaagttgtttaccttggtgttaatgttcaagtaagactgatgcttatgaattaatgttgctt 11459  T
Q  131 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||    
T  11458 ataatgttatataatagtatatacattacatgacttaagtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactg 11359  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11358 cctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 11292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 65 - 297
Target Start/End: Complemental strand, 2229 - 1997
Alignment:
Q  65 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 164  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2229 aaactaagttgtttaccttgctgttaatgttccagtaagtctgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 2130  T
Q  165 ttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgca 264  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  2129 ttaagtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgtttgtgtttgttatttaactaagctgca 2030  T
Q  265 tgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||||||||||||||||||||||||||||    
T  2029 tgagtcggtctaagttgttgaagatgatgatgt 1997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 28490 - 28414
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  28490 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 28414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 4608 - 4552
Alignment:
Q  241 tgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4608 tgtttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 4552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 220; Significance: 1e-121; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 30 - 297
Target Start/End: Complemental strand, 34390 - 34123
Alignment:
Q  30 tgttcgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgct 129  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34390 tgttctagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaattttccagtaagactgatgcttatgaattaatgttgct 34291  T
Q  130 tataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatact 229  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||| ||| |||||    
T  34290 tataatgttatataattgtatatatattacttgacttaagtttgataattgagttgttgatttacattcgatattattatatcatgatgggttgtatact 34191  T
Q  230 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  34190 gcctatgttgttgtttgttatttaactaagctgtatgagtcggtctaagttgttgaagatgatgatgt 34123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 326 - 273
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||    
T  326 ttgttatttaactaagctgcatgaatcggtctaagttgatgaagataatgatgt 273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 15552082 - 15551817
Alignment:
Q  31 gttcgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctt 130  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||| |||||||||||||||||||||||| ||||||||||    
T  15552082 gttcgagttgatgtgagttgatcttagaggttagaaactaagttgtt-accctgctgttaatgtcccagtaagactgatgcttatgaatcaatgttgctt 15551984  T
Q  131 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||| |||| ||||||||||    
T  15551983 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgttgatttaccttcgatattattatatcatgatggattgcatactg 15551884  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15551883 cctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 15551817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 31 - 259
Target Start/End: Complemental strand, 16596914 - 16596686
Alignment:
Q  31 gttcgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctt 130  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  16596914 gttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttcaagtaagactgatgcttataaattaatgttgctt 16596815  T
Q  131 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||     
T  16596814 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgatgatttacattcgatattattatatcatgatggtttgcatacta 16596715  T
Q  231 cctatgttgttgtttgttattcaactaag 259  Q
    ||||||||| ||||||||||| |||||||    
T  16596714 cctatgttgctgtttgttatttaactaag 16596686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 34 - 293
Target Start/End: Complemental strand, 12774263 - 12774011
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||  |||||||||||||||||||| |||||||| |||||| |||||    
T  12774263 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaattgatgttgtttata 12774164  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgc 231  Q
    |||        |||||||||||||| |||  ||| | |||||||||||| || || |  || ||||||||||| ||||||||| ||| ||||||||||||    
T  12774163 atg--------ttgtatatacattaaatggattatg-ttgataattgagatgttgttgattgtattcgatattgttatatcatgatgatttgcatactgc 12774073  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  12774072 ctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 12774011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 34 - 278
Target Start/End: Original strand, 13705 - 13953
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| |||  |||| |||||||||||||||||||| |||||| || |||||| |||||    
T  13705 cgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatctttatgttgatgttccagtaagactgatgtttatgatttgatgttgtttata 13804  T
Q  134 atgttatataattgtatatacattacatgacttaagtttg-ataattga---gttgctgatttatattcgatattattatatcattatggtttgcatact 229  Q
    |||| ||||||||||||||||||||| ||| |||  | || ||| ||||   |||| ||| ||  ||| |||||| |||||||||  || ||||||||||    
T  13805 atgtgatataattgtatatacattacttgaattatatatgaatatttgagatgttgatgacttgcatttgatattgttatatcatgttgttttgcatact 13904  T
Q  230 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||| ||||||||  | ||||||||||||||||||||||||||    
T  13905 gcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 13953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 34 - 293
Target Start/End: Complemental strand, 8846638 - 8846360
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||| ||||||| ||| ||||||||||||||| ||||  |||  |||||||||||||||||||| |||||||| |||||| |||||    
T  8846638 cgagttgatgtgagttgaacttagagattagaaactaagttgtttatcttgtagttgttgttccagtaagactgatgcatatgaattgatgttgtttata 8846539  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgat------------------tta-tattcgatattattatatcat 214  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||| || ||||                  |||  |||||||||| |||| ||||    
T  8846538 atgttatataattgtatatacattacatgaattatgtttgatatttgagatgttgatgacttgcattcgatattgttagcattcgatattgttatctcat 8846439  T
Q  215 tatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
     ||| |||||||||||||||||||| ||||||||||| |||||||||| || ||||||||||||||| ||| |||||||    
T  8846438 gatgatttgcatactgcctatgttgctgtttgttatttaactaagctgaataagtcggtctaagttgatgatgatgatg 8846360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 34 - 297
Target Start/End: Original strand, 39706144 - 39706409
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||| ||| |||  || ||||||||||| |||||||||  ||||  |||||| ||||    |||||  |||||||| |  ||    
T  39706144 cgagttgatgtgagttgatcttggagattaggaattaagttgtttatcttgctgttgttgttttagtaagcctgaattatatgatctaatgttgttgcta 39706243  T
Q  134 atgttatataattgtatatacattacatgacttaagtt--tgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgc 231  Q
    |||||||||||||||||||||||||||||| ||| |||  || | ||   |||  ||| ||  |||||||||| ||||||||| ||| ||||||||||||    
T  39706244 atgttatataattgtatatacattacatgaattatgttgatgtttatgatgttcatgacttgcattcgatattgttatatcatgatgatttgcatactgc 39706343  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  39706344 ctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 39706409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 36 - 281
Target Start/End: Original strand, 12288066 - 12288315
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataat 135  Q
    |||||||||||||||||||| |||||   ||||||||||||||| |||||||||  |||| ||||||| ||||    ||||| ||||||||| |  ||||    
T  12288066 agttgatgtgagttgatcttggaggtaggaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattatatgatttaatgttgttggtaat 12288165  T
Q  136 gttatataattgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcatactgc 231  Q
    |||||||| ||||||||||||||||||| ||| |||||||  | ||| |||| ||| ||  ||| |||||| ||||||||| |  |||||||||||||||    
T  12288166 gttatatagttgtatatacattacatgaattatgtttgatgttgtgatgttgttgaattgcatttgatattgttatatcatgaactggtttgcatactgc 12288265  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  12288266 ctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttg 12288315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 34 - 281
Target Start/End: Original strand, 43198410 - 43198660
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    ||||||||||||||||| |   |||||| ||||||||||||||||| |||| |||| |||||||||||||||| |||| |||||||| |||||| |||||    
T  43198410 cgagttgatgtgagttgct---agaggtaaaaaactaagttgtttatcttgttgttgatgttccagtaagactaatgcatatgaattgatgttgtttata 43198506  T
Q  134 atgttatataattgtatatacattacatgacttaagtttg-ataattgag---ttgctgatttatattcgatattattatatcatta--tggtttgcata 227  Q
    |||| ||||||||||||||||||||| ||| |||  | || ||| |||||   ||| ||| ||  ||| |||||  ||||||||| |  || ||||||||    
T  43198507 atgtgatataattgtatatacattacttgaattatatatgaatatttgagatattgatgacttgcatttgatatggttatatcatgaattgttttgcata 43198606  T
Q  228 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
     || |||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  43198607 ttgtctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttg 43198660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 3096369 - 3096293
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3096369 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 3096293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 12902833 - 12902757
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12902833 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 12902757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 17046559 - 17046487
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  17046559 atactacctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 17046487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 7088953 - 7088877
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  7088953 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 7088877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 7798850 - 7798774
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  7798850 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 7798774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 52243240 - 52243301
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  52243240 tttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttg 52243301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 52873412 - 52873488
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  52873412 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 52873488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 219 - 297
Target Start/End: Original strand, 14053344 - 14053422
Alignment:
Q  219 gtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||| |||||| ||||| |||||||||||||| ||||||| ||||||||||| |||||| ||||||||||||||||||    
T  14053344 gtttgtatactgtctatgctgttgtttgttatttaactaagttgcatgagtcgatctaagatgttgaagatgatgatgt 14053422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 22636504 - 22636437
Alignment:
Q  227 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgat 295  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  22636504 actgtctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgat 22636437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 16377565 - 16377639
Alignment:
Q  219 gtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    ||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  16377565 gtttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagataatga 16377639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 297
Target Start/End: Original strand, 16270259 - 16270356
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||  || |||| ||||||||||||||| | || |||||| || |||||||||||||||||||||| ||| |||||||||||||||    
T  16270259 gatattattatgtcatgctgttttgtatactgcctatgttgctatt-gttatttaattaagctgcatgagtcggtctaacttgatgaagatgatgatgt 16270356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 220 - 290
Target Start/End: Original strand, 23374404 - 23374473
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatg 290  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  23374404 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcgttctaagttgttgaagatg 23374473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 6899967 - 6899891
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| | || |||||| ||||||| ||||||||||||||||||||| |||||||||||||||    
T  6899967 tttgtatactgcctatgttgctatt-gttatttaactaagatgcatgagtcggtctaagttgatgaagatgatgatgt 6899891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 7893779 - 7893703
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| | || |||||| ||||||||||||||| ||||||||||||| |||||||||||||||    
T  7893779 tttgtatactgcctatgttgctatt-gttatttaactaagctgcatgaatcggtctaagttgatgaagatgatgatgt 7893703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 44052905 - 44052829
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| |||| ||||||||||||||| |||||||| |||||||||||||||    
T  44052905 tttgtatactgcctatgttgatgtt-gttatttaactgagctgcatgagtcggcctaagttgatgaagatgatgatgt 44052829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 15099613 - 15099485
Alignment:
Q  35 gagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataa 134  Q
    ||||||||||||||||||||| ||||||| |||||||||| ||||||||| ||||    |||||||||| |||     |||    |||||||| | ||||    
T  15099613 gagttgatgtgagttgatcttggaggttagaaactaagttatttaccttgatgttgtcattccagtaagcctggattgtatattctaatgttgatgataa 15099514  T
Q  135 tgttatataattgtatatacattacatga 163  Q
    |||||||||||||||||||||||| ||||    
T  15099513 tgttatataattgtatatacattatatga 15099485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 54798822 - 54798872
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  54798822 ttgttattcaactaagctgcatgagtcggtctaagttgattaagatgatga 54798872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 15190581 - 15190452
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||| | ||||| |||||||||| ||||||||| ||||    |||||||||| |||     |||    |||||||| | |||    
T  15190581 cgagttgatgtgagttgatcttgggggttagaaactaagttatttaccttgatgttgtcattccagtaagcctggattgtatattctaatgttgatgata 15190482  T
Q  134 atgttatataattgtatatacattacatga 163  Q
    ||||||||||||||||||||||||| ||||    
T  15190481 atgttatataattgtatatacattatatga 15190452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 19242749 - 19242693
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgtcca 300  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||| |||||    
T  19242749 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgaagtcca 19242693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 12419 - 12469
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  12419 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 12469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 1837621 - 1837671
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  1837621 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 1837671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 7641294 - 7641344
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  7641294 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 7641344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 12611000 - 12610950
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  12611000 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 12610950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 14280366 - 14280316
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  14280366 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 14280316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 15118464 - 15118514
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  15118464 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 15118514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 297
Target Start/End: Original strand, 16239993 - 16240090
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||  || |||| ||||||||||| ||| | || |||||| || |||| ||||||||| ||||||||||| |||||||||||||||    
T  16239993 gatattattatgtcatgctgttttgtatactgcctattttgctatt-gttatttaattaagttgcatgagttggtctaagttgatgaagatgatgatgt 16240090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 18215386 - 18215436
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  18215386 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 18215436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 18239531 - 18239581
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  18239531 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 18239581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 23803377 - 23803427
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  23803377 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 23803427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 44102264 - 44102214
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  44102264 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 44102214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 44615338 - 44615288
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  44615338 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 44615288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 44773199 - 44773249
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  44773199 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 44773249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 44928992 - 44929042
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  44928992 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 44929042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 50222451 - 50222501
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  50222451 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 50222501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 51463980 - 51464030
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  51463980 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 51464030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 52312560 - 52312510
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  52312560 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 52312510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 53082005 - 53082135
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaa-aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttat 132  Q
    |||||||||||||||||||||| | || ||| ||||||||||| ||| ||| |||||  |||| ||||||| ||||    ||||| || |||||| | ||    
T  53082005 cgagttgatgtgagttgatcttggggggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcctgaattatatgatttgatgttgttaat 53082104  T
Q  133 aatgttatataattgtatatacattacatga 163  Q
    ||||| |||||| ||||||| ||||||||||    
T  53082105 aatgtgatataaatgtatatgcattacatga 53082135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 15367743 - 15367690
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| |||||||||||||||||| |||||||| |||||||||| ||||||    
T  15367743 ttgttatttaactaagctgcatgagtcagtctaagtcgttgaagatgttgatgt 15367690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 15370071 - 15370018
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| |||||||||||||||||| |||||||| |||||||||| ||||||    
T  15370071 ttgttatttaactaagctgcatgagtcagtctaagtcgttgaagatgttgatgt 15370018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 15371255 - 15371202
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| |||||||||||||||||| |||||||| |||||||||| ||||||    
T  15371255 ttgttatttaactaagctgcatgagtcagtctaagtcgttgaagatgttgatgt 15371202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 15373536 - 15373483
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| |||||||||||||||||| |||||||| |||||||||| ||||||    
T  15373536 ttgttatttaactaagctgcatgagtcagtctaagtcgttgaagatgttgatgt 15373483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 15402756 - 15402703
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| |||||||||||||||||| |||||||| |||||||||| ||||||    
T  15402756 ttgttatttaactaagctgcatgagtcagtctaagtcgttgaagatgttgatgt 15402703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 16223585 - 16223532
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| |||||||||||||||||| |||||||| |||||||||| ||||||    
T  16223585 ttgttatttaactaagctgcatgagtcagtctaagtcgttgaagatgttgatgt 16223532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 14038701 - 14038653
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgat 292  Q
    |||||||| |||||||||||||||||| |||||||||| ||||||||||    
T  14038701 ttgttatttaactaagctgcatgagtcagtctaagttgatgaagatgat 14038653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 19618284 - 19618336
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatg 296  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||| |||||    
T  19618284 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgttgatg 19618336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 278
Target Start/End: Original strand, 46640311 - 46640558
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||| | | ||| | ||||||||||| ||| ||| |||||| |||| ||||||  ||||    ||||| || |||||| | ||     
T  46640311 cgagttgatgtgagttgatcatgg-ggtaagaaactaagttgcttatcttactgttattgtttcagtaaacctgaattatatgatttgatgttgttaatg 46640409  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgct---gatttatattcgatattattatatcatta--tggtttgcatac 228  Q
    |||| |||||| ||||||| |||||||||| |||  | ||||  ||||| || |   |||||  ||| |||||| ||||||||| |  || |||  ||||    
T  46640410 atgtgatataaatgtatatgcattacatgaattatatatgatg-ttgagatgttattgattttcatttgatattgttatatcatgaactgttttatatac 46640508  T
Q  229 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    || |||||||| ||||||||  | ||||||||||||||||||||||||||    
T  46640509 tgtctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 46640558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 22353886 - 22353835
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgat 295  Q
    |||||||| | |||||||||||||||||||||||| ||||||| ||||||||    
T  22353886 ttgttatttacctaagctgcatgagtcggtctaagatgttgaatatgatgat 22353835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 3515057 - 3515007
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    ||||| || ||||||||||||||||||||||||||||| | ||||||||||    
T  3515057 ttgttttttaactaagctgcatgagtcggtctaagttgattaagatgatga 3515007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 6190531 - 6190481
Alignment:
Q  228 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||||| |||||| | || ||||||||||||||||||||||||||    
T  6190531 ctgcctatgttgctgtttgatgtttaactaagctgcatgagtcggtctaag 6190481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 8574935 - 8574985
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||  | ||||||||||    
T  8574935 ttgttatttaactaagctgcatgagtcggtctaagttaattaagatgatga 8574985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 15355437 - 15355483
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatg 290  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||    
T  15355437 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatg 15355483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 53082202 - 53082254
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||| ||||||| ||||||||  | ||||||||||||||||||||||||||    
T  53082202 tactgcttatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 53082254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 281
Target Start/End: Original strand, 14970819 - 14970856
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  14970819 ttgttatttaactaagctgcatgagttggtctaagttg 14970856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 31 - 294
Target Start/End: Complemental strand, 15927 - 15664
Alignment:
Q  31 gttcgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctt 130  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  15927 gttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgatccagtaagactgattcttatgaaataatgttgctt 15828  T
Q  131 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||| ||||||    
T  15827 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgtatactg 15728  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    ||||||||| ||||||||||| |||||||||||| |||||||||||||||| | ||||||||||    
T  15727 cctatgttgctgtttgttatttaactaagctgcacgagtcggtctaagttgattaagatgatga 15664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 34 - 297
Target Start/End: Original strand, 28496329 - 28496592
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28496329 cgagttgatgtgagttgatcttagagtttagaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcatatgaattaatgttgcttata 28496428  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcct 233  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||    
T  28496429 atgttatataattgtatatacattacatgacttatgtttgatatttgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcct 28496528  T
Q  234 atgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||| |  |||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  28496529 atgttgctaattgttatttaactaagctgcatgagtcggtctaagtttttgaagatgatgatgt 28496592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 34 - 297
Target Start/End: Original strand, 29808740 - 29809003
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29808740 cgagttgatgtgagttgatcttagagtttagaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcatatgaattaatgttgcttata 29808839  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcct 233  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||    
T  29808840 atgttatataattgtatatacattacatgacttatgtttgatatttgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcct 29808939  T
Q  234 atgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||| |  |||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  29808940 atgttgctaattgttatttaactaagctgcatgagtcggtctaagtttttgaagatgatgatgt 29809003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 34 - 297
Target Start/End: Complemental strand, 1561567 - 1561303
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaatt-aatgttgcttat 132  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||| |||||||| ||||||||||||    
T  1561567 cgagttgatgtgagttgatcctagaggttagaaactaagttgtttatcttgctgttaatattccagtaagactgatgcatatgaatttaatgttgcttat 1561468  T
Q  133 aatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcc 232  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||  |||||||||||||||||||| |||||||||||||| ||    
T  1561467 aatgttatataattgtatatacattacatgacttatgtttgatatttgagttgttgatttgcattcgatattattatatcatgatggtttgcatactacc 1561368  T
Q  233 tatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||| ||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  1561367 tatattgttatttgttatttaactaagctgcatgagtcagtctaagttgttgaagatgatgatgt 1561303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 34 - 293
Target Start/End: Complemental strand, 19652459 - 19652199
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| |||||||| |||||| |||||    
T  19652459 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttattgttccagtaagactgatgcatatgaattgatgttgtttata 19652360  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgc 231  Q
    ||||||||||||||||||||| ||| |||  ||| | |||||  ||||| || || |  ||  |||||||||| ||||||||| ||| ||||||||||||    
T  19652359 atgttatataattgtatatactttaaatggattatg-ttgatgtttgagatgttgttgattgcattcgatattgttatatcatgatgatttgcatactgc 19652261  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||    
T  19652260 ctatgttgttgtttgttgtttaactaagctgcatgagtcggtctaagttgatgatgatgatg 19652199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 34 - 281
Target Start/End: Complemental strand, 19668638 - 19668387
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||| ||||| | ||||||||||||||| |||||||||  |||| ||||||| ||||||  |||||  || ||||| | |||    
T  19668638 cgagttgatgtgagttgatcttggaggtaagaaactaagttgtttatcttgctgttgttgtttcagtaagtctgatgtatatgatgtagtgttgttgata 19668539  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcatact 229  Q
    |||||||||| ||||||||||||||||||| ||| || ||||  | ||| |||| ||||||  ||| |||||| ||||||||| |  || ||||||||||    
T  19668538 atgttatatagttgtatatacattacatgaattacgtatgatgttgtgatgttgttgatttgcatttgatattgttatatcatgaactgttttgcatact 19668439  T
Q  230 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
      |||||||| ||||||||| | |||||||||||||||||||||||||||||    
T  19668438 atctatgttgctgtttgttaattaactaagctgcatgagtcggtctaagttg 19668387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 34 - 278
Target Start/End: Complemental strand, 23019672 - 23019425
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||  |||| ||||||| ||||    ||| |  |||||| | |  ||    
T  23019672 cgagttgatgtgagttgatcttggaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaactatataatctaatgtcgttgtta 23019573  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||||||||||||||||||||||| ||| |||||||  ||||   |||| ||| ||  ||| |||||| |||||||||  || |||||||||||    
T  23019572 atgttatataattgtatatacattacatgaattatgtttgatgtttgagatgttgttgacttgcatttgatattgttatatcatgttgttttgcatactg 23019473  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    | ||||||| ||||||||  | ||||||||||||| ||||||||||||    
T  23019472 cttatgttgctgtttgtttattaactaagctgcataagtcggtctaag 23019425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 34 - 297
Target Start/End: Complemental strand, 20109407 - 20109140
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| ||||||| |    ||| |||||||||||||  ||| |||| |||||| |||||    
T  20109407 cgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgctgatgtctttctagtaagactgatgtatatcaattgatgttgtttata 20109308  T
Q  134 atgttatata--attgtatatacattacatgacttaagtttg-ataattga---gttgctgatttatattcgatattattatatcattatggtttgcata 227  Q
    |||| |||||  |||||||||||||||| ||| |||  | || ||| ||||   |||| ||| ||  ||| |||||| |||||| ||  || ||||||||    
T  20109307 atgtgatataatattgtatatacattacttgaattatatatgaatatttgagatgttgatgacttgcatttgatattgttatattatgttgttttgcata 20109208  T
Q  228 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||||||| ||||||||  | |||||||||||||||||||||||||||||   |||||||||||||    
T  20109207 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagttg--aaagatgatgatgt 20109140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 27333238 - 27333339
Alignment:
Q  196 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgat 295  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||    
T  27333238 ttcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgat 27333337  T
Q  296 gt 297  Q
    ||    
T  27333338 gt 27333339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 27393978 - 27394079
Alignment:
Q  196 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgat 295  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||    
T  27393978 ttcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgat 27394077  T
Q  296 gt 297  Q
    ||    
T  27394078 gt 27394079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 34 - 281
Target Start/End: Original strand, 9098380 - 9098619
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||| | ||||||| ||||||| ||||| |||| |||| ||||||| ||||    ||||| ||||||||           
T  9098380 cgagttgatgtgagttgatcttagaggtaagaaactaatttgtttatcttgcagttattgtttcagtaagcctgaattatatgatttaatgtt------- 9098472  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcatact 229  Q
         |||||||| |||||||||||||||| ||| |||||||  | ||| |||| |||  |  ||| |||||| ||||||||| |  || ||||||||||    
T  9098473 -----atataattatatatacattacatgaattatgtttgatgttgtgaagttgttgaaatgcatttgatattgttatatcatgaattgttttgcatact 9098567  T
Q  230 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||| ||||| ||||||||||| |||||||||||||||||||||||||||||    
T  9098568 gcctttgttgctgtttgttatttaactaagctgcatgagtcggtctaagttg 9098619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 16496320 - 16496244
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16496320 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 16496244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 35245658 - 35245586
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||    
T  35245658 atactgcctatgttggtgtttgttaattaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 35245586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 199 - 297
Target Start/End: Complemental strand, 20076797 - 20076700
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||  || ||||  |||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  20076797 gatattattatgtcatgctgttttgtttactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 20076700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 20638328 - 20638404
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||| |||||||||||||||    
T  20638328 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagttggtctaagttgatgaagatgatgatgt 20638404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 16920679 - 16920751
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||||||| || ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||    
T  16920679 atactgcctatgctgctgtttgttatttaactaagctgcatgagtcggtcaaagatgttgaagatgatgatgt 16920751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 8227533 - 8227632
Alignment:
Q  198 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||| ||| ||||||||||||||| |||| || |  |||   |||||||||||||||||||||| ||||||||||||||| ||||||    
T  8227533 cgatattattatatcatgatgttttgcatactgcctacgttgctgatcattaactaactaagctgcatgagtcggtccaagttgttgaagatgttgatgt 8227632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 199 - 297
Target Start/End: Original strand, 19303564 - 19303661
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||  || |||| ||||| ||| |||||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  19303564 gatattattatgtcatgttgttttgtatacttcctgtgttgttgtt-gttatttaactaagctgcatgagtcggtctaagatgatgaagatgatgatgt 19303661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 25644397 - 25644336
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||    
T  25644397 tttgcatactgcctatgttgctgtctgttatttaactaagctgcatgagtcggtctaagttg 25644336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 29060616 - 29060540
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  29060616 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagctgatgaagatgatgatgt 29060540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 229 - 297
Target Start/End: Complemental strand, 22831571 - 22831503
Alignment:
Q  229 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||   ||||||||||||||||||    
T  22831571 tgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctactatgttgaagatgatgatgt 22831503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 278
Target Start/End: Complemental strand, 35008416 - 35008167
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||| | | ||| | ||||||||||| ||| ||| |||||| |||| ||||||| |||||    |||| || |||||| | |||    
T  35008416 cgagttgatgtgagttgatcatgggggtaagaaactaagttgcttatcttactgttattgtttcagtaagcctgatatagatgatttgatgttgttaata 35008317  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttg---ctgatttatattcgatattattatatc--attatggtttgcatac 228  Q
    |||| ||||| |||||||| |||||||||| |||  | ||||  || |||||    |||||   | | ||||||||||||||    |||| |||   |||    
T  35008316 atgtgatatatttgtatattcattacatgaattatatatgatgtttaagttgtttttgattatcacttgatattattatatctggatatgttttatgtac 35008217  T
Q  229 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||||||||||||||||  | ||||||||||||||||||||||||||    
T  35008216 tgcctatgttgttgtttgtttattaactaagctgcatgagtcggtctaag 35008167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 297
Target Start/End: Original strand, 17287819 - 17287917
Alignment:
Q  199 gatattattatatcattatg-gtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||  || ||||| ||||| ||||||||| |||| |||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  17287819 gatattattatgtcatgctgtgtttgtatactacctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 17287917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 195 - 281
Target Start/End: Original strand, 4185840 - 4185926
Alignment:
Q  195 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||| ||| |||| || ||||| |||||||||||||||| ||||||    
T  4185840 attcgatattgttatatcatgatgagttgcatactgcctatgttgctgtctgttgtttaactatgctgcatgagtcggtccaagttg 4185926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 22780272 - 22780348
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||| |||||||||| ||||| |||||| |||||||||||||||||| |||||||||| |||||||||||||||    
T  22780272 tttgtatattgcctatgtttttgtt-gttatttaactaagctgcatgagtcagtctaagttgatgaagatgatgatgt 22780348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 234 - 285
Target Start/End: Complemental strand, 11185568 - 11185517
Alignment:
Q  234 atgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttga 285  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  11185568 atgttgttgtttgttatttaactaagctgcatgagtcggtctaagatgttga 11185517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 296
Target Start/End: Original strand, 18409877 - 18409947
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatg 296  Q
    ||||||||| ||||| |||| |||||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  18409877 atactgcctgtgttgctgtt-gttatttaactgagctgcatgagtcggtctaagttgatgaagatgatgatg 18409947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 278
Target Start/End: Complemental strand, 23076997 - 23076749
Alignment:
Q  35 gagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataa 134  Q
    ||||||||||||||||||| | | ||| | ||||||| ||| ||| ||| |||||  |||| ||||||| |||||    |||| || |||||| | ||||    
T  23076997 gagttgatgtgagttgatcatgggggtaagaaactaatttgcttatcttactgttgttgtttcagtaagcctgatatagatgatttgatgttgttaataa 23076898  T
Q  135 tgttatataattgtatatacattacatgacttaagtttgataattgagttgctgat--ttat-attcgatattattatatcat--tatggtttgcatact 229  Q
    ||| ||||| |||||||| |||||||||| |||  | ||||  || ||||| || |  |||| | | ||||||||||||||    |||| |||   ||||    
T  23076897 tgtgatatatttgtatatgcattacatgaattatatatgatgtttaagttgttgttgattatcacttgatattattatatctggatatgttttatgtact 23076798  T
Q  230 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||    
T  23076797 gcctatgttgttgtttgtttattaactaagctgcatgagtcggtctaag 23076749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 27333140 - 27333214
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga 108  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| |||| ||||  |||| ||||||| ||||    
T  27333140 cgagttgatgtgagttgatcttagaggttagaaactaaattgtttatcttgatgttgctgtttcagtaagcctga 27333214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 27393880 - 27393954
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga 108  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| |||| ||||  |||| ||||||| ||||    
T  27393880 cgagttgatgtgagttgatcttagaggttagaaactaaattgtttatcttgatgttgctgtttcagtaagcctga 27393954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 20361013 - 20361081
Alignment:
Q  228 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||||||| |||| |||||| ||||||||||||||||||| ||||||||| |||| ||||||||||    
T  20361013 ctgcctatgttgctgtt-gttatttaactaagctgcatgagtcgatctaagttgatgaaaatgatgatgt 20361081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 22080594 - 22080663
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaag 103  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||| |||||| ||  |||| |||||||    
T  22080594 cgagttgatgtgagttgatcttagaggttagaaactaagttgcttatcttgctcttgttgtttcagtaag 22080663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 25629423 - 25629476
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  25629423 ttgtaatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 25629476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 25714470 - 25714417
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  25714470 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 25714417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 2291292 - 2291342
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  2291292 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 2291342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 3852129 - 3852179
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  3852129 ttgttattaaactaagctgcatgagtcggtctaagttgattaagatgatga 3852179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 4186469 - 4186383
Alignment:
Q  195 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||||||| ||||||||| |||  |||||||||| |||||||| ||  |||| || ||||| |||||||||||||||| ||||||    
T  4186469 attcgatattgttatatcatgatgagttgcatactgtctatgttgctgcctgttgtttaactatgctgcatgagtcggtccaagttg 4186383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 8055079 - 8055029
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  8055079 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 8055029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 12742367 - 12742317
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  12742367 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 12742317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 18334704 - 18334754
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  18334704 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 18334754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 19005096 - 19005046
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  19005096 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 19005046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 19859031 - 19859081
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  19859031 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 19859081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 22782277 - 22782227
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  22782277 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 22782227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 24422597 - 24422547
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  24422597 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 24422547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 25656679 - 25656629
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  25656679 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 25656629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 25754859 - 25754809
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  25754859 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 25754809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 26924752 - 26924802
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  26924752 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 26924802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 33861844 - 33861794
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  33861844 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 33861794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 33864328 - 33864278
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  33864328 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 33864278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 20593844 - 20593773
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||| | ||||| ||||| ||||| |||| |||||||||| ||||||||||||| |||||||||||||||    
T  20593844 atactgcatgtgttgctgttt-ttatttaactgagctgcatgattcggtctaagttgatgaagatgatgatgt 20593773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 30676822 - 30676874
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatg 296  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||| |||||    
T  30676822 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgttgatg 30676874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 1541023 - 1541073
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||| ||||||||| | ||||||||||    
T  1541023 ttgttatttaactaagctgcatgagtcgatctaagttgattaagatgatga 1541073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 1595599 - 1595549
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| |||||||||||||||||| |||||||||| | ||||||||||    
T  1595599 ttgttatttaactaagctgcatgagtcagtctaagttgattaagatgatga 1595549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 4668069 - 4668135
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagt 100  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||  || | ||||||| ||||||||||    
T  4668069 cgagttgttgtgagttgatcttagatgttaagaactaagttgcctagcatgctgttgatgttccagt 4668135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 4674916 - 4674982
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagt 100  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||  || | ||||||| ||||||||||    
T  4674916 cgagttgttgtgagttgatcttagatgttaagaactaagttgcctagcatgctgttgatgttccagt 4674982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 20557004 - 20557054
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||| ||||||||||| | ||||||||||    
T  20557004 ttgttatttaactaagctgcatgagttggtctaagttgattaagatgatga 20557054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 22080802 - 22080846
Alignment:
Q  253 aactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||||||||||||||||||||| || | |||||||||||||    
T  22080802 aactaagctgcatgagtcggtctaagatgattaagatgatgatgt 22080846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 34963423 - 34963371
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatg 296  Q
    |||||||| ||||||| ||||||||||||||||||||| | |||||| |||||    
T  34963423 ttgttatttaactaagttgcatgagtcggtctaagttgattaagatgttgatg 34963371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 291
Target Start/End: Original strand, 16448639 - 16448686
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatga 291  Q
    |||||||| ||||||||||||||||||||| ||||||| | |||||||    
T  16448639 ttgttatttaactaagctgcatgagtcggtttaagttgattaagatga 16448686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 238
Target Start/End: Original strand, 22080757 - 22080800
Alignment:
Q  195 attcgatattattatatcattatggtttgcatactgcctatgtt 238  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||    
T  22080757 attcgatattgttatatcatgatgttttgcatactgcctatgtt 22080800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 276
Target Start/End: Complemental strand, 33443118 - 33443068
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 276  Q
    ||||||||||||||| ||||  ||||| ||||||||||||||||||||||||    
T  33443118 atactgcctatgttgctgttgtttatt-aactaagctgcatgagtcggtcta 33443068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 4185679 - 4185745
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagt 100  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||  || | || |||| ||||||||||    
T  4185679 cgagttgttgtgagttgatcttagatgttaagaactaagttgcctagcatgttgttgatgttccagt 4185745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 278
Target Start/End: Complemental strand, 18456769 - 18456735
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||| ||||||||||||||||||||||||||    
T  18456769 ttgttatttaactaagctgcatgagtcggtctaag 18456735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 278
Target Start/End: Complemental strand, 18461929 - 18461895
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||| ||||||||||||||||||||||||||    
T  18461929 ttgttatttaactaagctgcatgagtcggtctaag 18461895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 278
Target Start/End: Original strand, 18821912 - 18821946
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||| ||||||||||||||||||||||||||    
T  18821912 ttgttatttaactaagctgcatgagtcggtctaag 18821946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 25688552 - 25688502
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||| ||||||||| | ||||| ||||    
T  25688552 ttgttatttaactaagctgcatgagtcgatctaagttgattaagataatga 25688502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 4668230 - 4668274
Alignment:
Q  195 attcgatattattatatcattatggtttgcatactgcctatgttg 239  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||    
T  4668230 attcgatattgttatatcatgatgagttgcatactgcctatgttg 4668274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 4675077 - 4675121
Alignment:
Q  195 attcgatattattatatcattatggtttgcatactgcctatgttg 239  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||    
T  4675077 attcgatattgttatatcatgatgagttgcatactgcctatgttg 4675121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 31 - 281
Target Start/End: Complemental strand, 20918870 - 20918620
Alignment:
Q  31 gttcgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctt 130  Q
    |||||| |||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||    
T  20918870 gttcgacttgatgtgagttgatcttagaggttagaaactaagtcgtttaccttgttgttaatgttccagtaagactcatgcttatgaattgatgttgctt 20918771  T
Q  131 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||    
T  20918770 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactg 20918671  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||||||  |||||||||| |||||||||||||||||||||||||||||    
T  20918670 cctatgttgcagtttgttatttaactaagctgcatgagtcggtctaagttg 20918620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 34 - 281
Target Start/End: Original strand, 52927837 - 52928075
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||  |||||||||||||||||||| |||||||| |||||| |||||    
T  52927837 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctattgttgttccagtaagactgatgcatatgaattgatgttgtttata 52927936  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcct 233  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||| ||         |||||||||| ||||||||| ||| ||||||||||| ||    
T  52927937 atgttatataattgtatatacattacatgaattatgtttgatatttgagatg---------attcgatattgttatatcatgatgatttgcatactgtct 52928027  T
Q  234 atgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  52928028 atgttgttgtttgttatttaactaagctgcatgagtcggtctaagttg 52928075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 34 - 297
Target Start/End: Complemental strand, 33681273 - 33681010
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||  ||||| |||||||||||||| |||||||| |||||| |||||    
T  33681273 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgttgttgttgttctagtaagactgatgcatatgaattgatgttgtttata 33681174  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||   ||||  || ||  |||||||||| ||||||||| ||| |||||||||||    
T  33681173 atgttatataattgtatatacattacatgaattatgtttgatatttgagatgttgacgacttgcattcgatattgttatatcatgatgatttgcatactg 33681074  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||| ||||||||||| ||||||| |||||||||||||||||   |||||||||||||||||    
T  33681073 cctatgttgctgtttgttatttaactaagttgcatgagtcggtctaa---gttgaagatgatgatgt 33681010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 36 - 293
Target Start/End: Complemental strand, 20248539 - 20248283
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataat 135  Q
    ||||||||| | |||||||||||||||| |||||||||| |||| |||| ||||  ||| |||||||||||||||| |||||||  |||||| |||||||    
T  20248539 agttgatgtaaattgatcttagaggttagaaactaagttatttatcttgatgttgttgt-ccagtaagactgatgcatatgaatccatgttgtttataat 20248441  T
Q  136 gttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctat 235  Q
    | |||||||||||||||||||||||||||||| |||||||| || ||||| ||||||  |||||||||| ||||||||| ||| ||||||||||||||||    
T  20248440 gatatataattgtatatacattacatgacttatgtttgatatttaagttgttgatttgcattcgatattgttatatcatgatgatttgcatactgcctat 20248341  T
Q  236 gttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    ||||||||||||| || ||||||| ||||||||||||||||||||| ||| |||||||    
T  20248340 gttgttgtttgttttttaactaagttgcatgagtcggtctaagttgatgatgatgatg 20248283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 129 - 297
Target Start/End: Original strand, 14295504 - 14295672
Alignment:
Q  129 ttataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatac 228  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  14295504 ttataatgttatataattgtatatacattacatgacttaagtctgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatac 14295603  T
Q  229 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    | ||||||||| ||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||    
T  14295604 tacctatgttgctgtttgttatttaactaagctgcatgagtcggtctaaaatgttgaagatgatgatgt 14295672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 34 - 297
Target Start/End: Complemental strand, 22237894 - 22237630
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctg-ttaatgttccagtaagactgatgcttatgaattaatgttgcttat 132  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||  ||||||||  |||||||| | |||||||| |||||| || |    
T  22237894 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgattgttgttccagcgagactgatacatatgaattgatgttgtttct 22237795  T
Q  133 aatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatact 229  Q
    || |||||||||||||||||||||||||||| ||| |||||||| ||||| || ||||   ||  |||||||||| ||||||||| ||| |||||||| |    
T  22237794 aaagttatataattgtatatacattacatgaattatgtttgatatttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcataat 22237695  T
Q  230 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| | ||||||||||| ||||||||| |||||||||||||||   |||||||||||||||||    
T  22237694 gcctatgtcgctgtttgttatttaactaagcttcatgagtcggtctaa---gttgaagatgatgatgt 22237630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 34 - 293
Target Start/End: Original strand, 22921724 - 22921986
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttat 132  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||  |||| ||||||| |||| |   |||||  |||||||| |  |    
T  22921724 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattaatatgatctaatgttgttgtt 22921823  T
Q  133 aatgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatact 229  Q
    |||||||||||||||||||||||||| |||| ||  ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||||||||||    
T  22921824 aatgttatataattgtatatacattatatgaattttgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatact 22921922  T
Q  230 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| || ||| |||||||    
T  22921923 gcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagatgatgatgatgatg 22921986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 34 - 290
Target Start/End: Complemental strand, 21754301 - 21754052
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||| |||||||| | |||||||||||||||||||| |||||||| |||||| |||||    
T  21754301 cgagttgatgtgagttgatctcagaggttagaaactaagttgtttatcttgctgtcattgttccagtaagactgatgcatatgaattgatgttgtttata 21754202  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgc 231  Q
    |||        |||||||||||||| |||  ||| | |||||||||||| || || |  ||  ||| |||||| ||||||||| ||| ||||||||||||    
T  21754201 atg--------ttgtatatacattaaatggattatg-ttgataattgagatgttgttgattgcatttgatattgttatatcatgatgatttgcatactgc 21754111  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatg 290  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  21754110 ctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagttgatgatgatg 21754052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 112 - 244
Target Start/End: Original strand, 22130843 - 22130975
Alignment:
Q  112 ttatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatat 211  Q
    |||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  22130843 ttatgatttgatgttgcttataatgttatataattgtatatgcattacatgacttaagtttgataattgagttgttgatttacattcgatattattatat 22130942  T
Q  212 cattatggtttgcatactgcctatgttgttgtt 244  Q
    ||| |||||||| ||||||||||||||| ||||    
T  22130943 catgatggtttggatactgcctatgttgctgtt 22130975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 51130732 - 51130632
Alignment:
Q  129 ttataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatac 228  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  51130732 ttataatgttatataattgtatatacattacatgacttaagtctgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatac 51130633  T
Q  229 t 229  Q
    |    
T  51130632 t 51130632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 34 - 278
Target Start/End: Original strand, 21861424 - 21861672
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||  |||| ||||||| ||||   ||||||  | |||||| |||||    
T  21861424 cgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgctattgttgtttcagtaagcctgaatattatgatatgatgttgtttata 21861523  T
Q  134 atgttatataattgtatatacattacatgacttaagtttg-ataattga---gttgctgatttatattcgatattattatatcattatggtttgcatact 229  Q
    |||| ||||||||||||||||||||| ||| |||  | || ||  ||||   |||| ||| ||  ||| |||||| |||||||||  || ||||||||||    
T  21861524 atgtgatataattgtatatacattacttgaattatatatgaatgtttgagatgttgatgacttgcatttgatattgttatatcatgctgttttgcatact 21861623  T
Q  230 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||| ||||||||  | | ||||||||||||||||||||||||    
T  21861624 gcctatgttgctgtttgtttattagctaagctgcatgagtcggtctaag 21861672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 278
Target Start/End: Original strand, 21896113 - 21896358
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    ||||||||||||||||||||||||| || | ||||||||||||||| |||| |||   |||| ||||||| ||||   |||||| || |||||| |||||    
T  21896113 cgagttgatgtgagttgatcttagatgtaagaaactaagttgtttatcttgttgt---tgtttcagtaagcctgaatattatgatttgatgttgtttata 21896209  T
Q  134 atgttatataattgtatatacattacatgacttaagtttg-ataattga---gttgctgatttatattcgatattattatatcattatggtttgcatact 229  Q
    |||| ||||||||||||||||||||||||| |||  | || ||  ||||   |||| ||| ||  ||| |||||| |||||||||  || |||| |||||    
T  21896210 atgtgatataattgtatatacattacatgaattatatatgaatgtttgagatgttgatgacttgcatttgatattgttatatcatgctgttttgtatact 21896309  T
Q  230 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||| ||||||||  | ||||||| ||||||||||||||||||    
T  21896310 gcctatgttgctgtttgtttattaactaagttgcatgagtcggtctaag 21896358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 226 - 297
Target Start/End: Original strand, 20847205 - 20847275
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20847205 tactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 20847275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 281
Target Start/End: Complemental strand, 16758754 - 16758665
Alignment:
Q  194 tattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||| |||||| ||||||||| |  ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||    
T  16758754 tatttgatattgttatatcatgaactggtttgcatactgcctatgttgctgtttgttatttaactaagttgcatgagtcggtctaagttg 16758665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 173
Target Start/End: Complemental strand, 20637113 - 20636975
Alignment:
Q  35 gagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataa 134  Q
    ||||||||||||||||||||| ||||||| |||||||||| ||||||||| ||||    |||||||||| ||||    |||   ||||||||| | ||||    
T  20637113 gagttgatgtgagttgatcttggaggttagaaactaagttatttaccttgatgttgtcattccagtaagcctgaattgtattttttaatgttgatgataa 20637014  T
Q  135 tgttatataattgtatatacattacatgacttaagtttg 173  Q
    |||||||||||||||||||||||| |||| ||| |||||    
T  20637013 tgttatataattgtatatacattatatgaattatgtttg 20636975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 27250774 - 27250850
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| | || |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  27250774 tttgtatactgcctatgttgctatt-gttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 27250850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 278
Target Start/End: Original strand, 35261023 - 35261180
Alignment:
Q  122 atgttgcttataatgttatataattgtatatacattacatgacttaagtttga-taattgagttgctgatttatattcgatattattatatcattatggt 220  Q
    |||||| | ||||||| || ||||||||||| |||||| ||| ||| || ||| |  ||||| || ||||||  ||| |||||| |||||||||  || |    
T  35261023 atgttgttaataatgtgatgtaattgtatatgcattacttgaattatgtatgaatgtttgagatgttgatttgcatttgatattgttatatcatgctgtt 35261122  T
Q  221 ttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||||||||||||||| ||||||||  | ||||||||||||||||||||||||||    
T  35261123 ttgcatactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 35261180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 45574932 - 45575008
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||| ||||||| ||||||||||    
T  45574932 tttgcatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagatgttgaatatgatgatgt 45575008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 221 - 297
Target Start/End: Original strand, 38801433 - 38801508
Alignment:
Q  221 ttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||    
T  38801433 ttgcacactgcctatgttgctgtttgttatttaactaagctgcatgagtc-gtctaagatgttgaagatgatgatgt 38801508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 50210258 - 50210333
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatg 296  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  50210258 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatg 50210333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 12271813 - 12271695
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| | |||||||| |||| |||||||||||       ||| || |||||  |||||    
T  12271813 cgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcctgctgttattgtttcagtaagactg-------tgagttgatgttatttata 12271721  T
Q  134 atgttatataattgtatatacattac 159  Q
    |||| ||||||||||||||| |||||    
T  12271720 atgtgatataattgtatatatattac 12271695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 294
Target Start/End: Complemental strand, 34509856 - 34509783
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  34509856 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatga 34509783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 21026756 - 21026680
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||| ||| |||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  21026756 tttgtatactgcctatattgctgtt-gttatttaactaagctgcatgagtcggtctaagttgttgacgatgatgatgt 21026680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 158
Target Start/End: Complemental strand, 49261605 - 49261481
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||||||| ||||    |||||||||| | ||    |||    |||||||| | |||    
T  49261605 cgagttgatgtgagttgatcttggaggttagaaactaagttatttaccttgatgttgtccttccagtaagccggaattgtatattctaatgttgatgata 49261506  T
Q  134 atgttatataattgtatatacatta 158  Q
    |||||||||||||||||||||||||    
T  49261505 atgttatataattgtatatacatta 49261481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 13212974 - 13213027
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  13212974 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 13213027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 16368141 - 16368270
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||| ||| ||| | ||| ||||||||||| ||| |||||  |||| ||||||| ||||    ||||| || |||||| | |||    
T  16368141 cgagttgatgtgagttgatcataggggtaagaaattaagttgtttatcttactgttgttgtttcagtaagcctgaattatatgatttgatgttgttaata 16368240  T
Q  134 atgttatataattgtatatacattacatga 163  Q
    |||| |||||| ||||||| ||||||||||    
T  16368241 atgtgatataaatgtatatgcattacatga 16368270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 22532345 - 22532269
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| ||||||  ||||||||| ||||||||||| |||||||||||||||    
T  22532345 tttgtatactgcctatgttgctgtt-gttatttaactaaattgcatgagttggtctaagttgatgaagatgatgatgt 22532269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 20454606 - 20454673
Alignment:
Q  228 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatg 296  Q
    |||||||||||| |||| |||||| ||||||||||||||||||||||||||||| | |||||| |||||    
T  20454606 ctgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgattaagatgttgatg 20454673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 21342146 - 21342090
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgtcca 300  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||| |||||    
T  21342146 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgaagtcca 21342090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 21707225 - 21707167
Alignment:
Q  235 tgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  21707225 tgttgttgtt-gttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 21707167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 21711767 - 21711709
Alignment:
Q  235 tgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  21711767 tgttgttgtt-gttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 21711709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 13988916 - 13988866
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  13988916 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 13988866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 21347011 - 21346961
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  21347011 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 21346961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 21923403 - 21923453
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  21923403 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 21923453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 23593847 - 23593897
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  23593847 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 23593897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 29298187 - 29298137
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  29298187 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 29298137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 29776738 - 29776688
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  29776738 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 29776688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 31612363 - 31612313
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  31612363 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 31612313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 433060 - 433012
Alignment:
Q  246 gttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  433060 gttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 433012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 15860121 - 15860177
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgtcca 300  Q
    |||||||| |||||||||||||||||||||| |||||| | |||||||||| |||||    
T  15860121 ttgttatttaactaagctgcatgagtcggtccaagttgattaagatgatgaagtcca 15860177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 50614167 - 50614219
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||||||| ||||||||  | ||||||||||||||||||||||||||    
T  50614167 tactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 50614219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 50621995 - 50622047
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||||||| ||||||||  | ||||||||||||||||||||||||||    
T  50621995 tactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 50622047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 21840817 - 21840766
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgat 295  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||| ||||    
T  21840817 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgttgat 21840766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 22123171 - 22123230
Alignment:
Q  235 tgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    ||||| |||||| |||| ||||||||||||||||||||||||||| | | ||||||||||    
T  22123171 tgttgctgtttgctatttaactaagctgcatgagtcggtctaagtagattaagatgatga 22123230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 16361965 - 16361915
Alignment:
Q  246 gttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatg 296  Q
    |||||| ||||||||||||||||||||||||||||| | |||||| |||||    
T  16361965 gttatttaactaagctgcatgagtcggtctaagttgattaagatgttgatg 16361915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 16368338 - 16368388
Alignment:
Q  228 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||||| ||||||||  | ||||||||||||||||||||||||||    
T  16368338 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 16368388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 293
Target Start/End: Complemental strand, 21161817 - 21161720
Alignment:
Q  195 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||||| ||||||||  ||| |||||||||||  | ||||| |||||||| || ||||||| ||||||||||| || |||||| ||| |||||||    
T  21161817 attcgatattgttatatcacgatgatttgcatactgttt-tgttgctgtttgttgtttaactaagttgcatgagtcgatccaagttgatgatgatgatg 21161720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 21475199 - 21475249
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||| ||||||||||| | ||||||||||    
T  21475199 ttgttatttaactaagctgcatgagttggtctaagttgattaagatgatga 21475249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 276
Target Start/End: Complemental strand, 26065009 - 26064959
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 276  Q
    |||||||||||||| ||||||||  ||||||||||||||||||| ||||||    
T  26065009 tactgcctatgttgctgtttgtttatcaactaagctgcatgagttggtcta 26064959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 21714595 - 21714546
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||| ||| ||||||||||||||||||||||||| | |||||||||    
T  21714595 ttgttatttaaccaagctgcatgagtcggtctaagttgatcaagatgatg 21714546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 163
Target Start/End: Original strand, 35981547 - 35981672
Alignment:
Q  38 ttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgt 137  Q
    |||||||||||||||||| ||||||| |||||||||| |||| |||| ||||    |||||||||| |||     |||    |||||||| | |||||||    
T  35981547 ttgatgtgagttgatcttggaggttagaaactaagttatttatcttgatgttgtcattccagtaagcctggattgtatattctaatgttgatgataatgt 35981646  T
Q  138 tatataattgtatatacattacatga 163  Q
    |||||||||| |||||||||| ||||    
T  35981647 tatataattgcatatacattatatga 35981672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 16275476 - 16275526
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||| || |||||||||||||||||| | ||||||||||    
T  16275476 ttgttatttaactaagttgtatgagtcggtctaagttgattaagatgatga 16275526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 41050085 - 41050138
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||||||||||| |||| |||    ||||||||||||||||||||||||||    
T  41050085 atactgcctatgttgctgttcgtttagtaactaagctgcatgagtcggtctaag 41050138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 21533923 - 21533974
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||| ||||||||||||  ||| | ||||||||||||||||||||||||||    
T  21533923 tactgcgtatgttgttgttgtttagt-aactaagctgcatgagtcggtctaag 21533974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 76 - 297
Target Start/End: Original strand, 23071849 - 23072070
Alignment:
Q  76 tttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttgat 175  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23071849 tttaccttgttgctaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttgat 23071948  T
Q  176 aattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 275  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||    
T  23071949 aattgagttgctgatttatattcgatattattatatcatgatggtttgcatactgcctatgttgttgttcgttatttaactaagctgcatgagtcggact 23072048  T
Q  276 aagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||||||||    
T  23072049 aagttgttgaagatgatgatgt 23072070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 38 - 293
Target Start/End: Complemental strand, 25176112 - 25175854
Alignment:
Q  38 ttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttataatg 136  Q
    ||||||| |||||||||||||||||| ||||||||||||||| |||||||||  |||| ||||||| |||| |   |||||  |||||||| |  |||||    
T  25176112 ttgatgtaagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattaatatgatctaatgttgttgttaatg 25176013  T
Q  137 ttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgcct 233  Q
    |||||||||| ||||||| ||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||||||||||||||    
T  25176012 ttatataattatatatacgttatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatactgcct 25175914  T
Q  234 atgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||| ||||||||||| ||||||||||||||| || |||||||||| ||| |||||||    
T  25175913 atgttgctgtttgttatttaactaagctgcatgaatctgtctaagttgatgatgatgatg 25175854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 34 - 292
Target Start/End: Complemental strand, 28406243 - 28405981
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgct-tatgaattaatgttgcttat 132  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||  ||||  |||||| || ||    |||||  || ||||| |  |    
T  28406243 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgttttagtaagcctaatttaatatgatctattgttgttgtt 28406144  T
Q  133 aatgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggttt-gcatac 228  Q
    |||| ||||||||||||||||||||  |||| ||||||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||| ||||||    
T  28406143 aatggtatataattgtatatacattttatgaattaagtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgattttgcatac 28406045  T
Q  229 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgat 292  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||| ||| ||||||    
T  28406044 tgcctatgttgctgtttgttatttaactaagttgcatgagtcggtctaagttgatgatgatgat 28405981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 34 - 296
Target Start/End: Original strand, 22134072 - 22134326
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||| | | |||||||||||||||||| ||||||||  ||||| |||||    
T  22134072 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgtcatttttccagtaagactgatgcatatgaattggtgttgtttata 22134171  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttat---attcgatattattatatcattatggtttgcatactg 230  Q
    |||        |||||||||||||| |||  ||| | ||||||| |||| || | ||| ||   |||||||||| |||||| || ||| |||||||||||    
T  22134172 atg--------ttgtatatacattaaatggattatg-ttgataaatgagatg-ttattgattgcattcgatattgttatattatgatgatttgcatactg 22134261  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatg 296  Q
    ||||||||| || ||| |||| |||||||||||||||||||||||| | || ||| ||||||||||    
T  22134262 cctatgttgctg-ttgatatttaactaagctgcatgagtcggtctatgatgatgatgatgatgatg 22134326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 281
Target Start/End: Original strand, 18786757 - 18787008
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||| |||||   ||||||||||||||| | |||||||  |||| ||||||| || |    ||||| | ||||||  | |||    
T  18786757 cgagttgatgtgagttgatcttggaggtaggaaactaagttgtttatcatgctgttgttgtttcagtaagcctaaattatatgattgaatgttattgata 18786856  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcatact 229  Q
    |||||||||| ||||||||||||||||||| ||| |||||||  | ||| |||| ||| ||  ||| || ||| ||||||||| |  |||||||||||||    
T  18786857 atgttatatagttgtatatacattacatgaattatgtttgatgttgtgacgttgttgaattgcatttgagattgttatatcatgaactggtttgcatact 18786956  T
Q  230 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
     ||||||||  || |||||||| |||||||||||||||||||||||||||||    
T  18786957 acctatgttactgattgttatttaactaagctgcatgagtcggtctaagttg 18787008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 134 - 293
Target Start/End: Complemental strand, 7679750 - 7679589
Alignment:
Q  134 atgttatataattgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    ||||||||||||| |||||||||||||||| ||| |||||||  ||  || |||| ||| ||| ||| |||||| ||||||||| ||| |||||||||||    
T  7679750 atgttatataattatatatacattacatgaattatgtttgatgtttatgatgttgatgacttacatt-gatattgttatatcatgatgatttgcatactg 7679652  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    ||||||||| ||||||||||| |||||||||||||||||| |||||||||| | |||||||||    
T  7679651 cctatgttgctgtttgttatttaactaagctgcatgagtcagtctaagttgattaagatgatg 7679589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 22459416 - 22459541
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||| |||||||||| |||| ||||||||||||||  || || || |||||  |||||    
T  22459416 cgagttgatgtgagttgaccttagaggtaagaaactaagttgtttatcttgctgttattgtttcagtaagactgatgtatacgagttgatgttatttata 22459515  T
Q  134 atgttatataattgtatatacattac 159  Q
    |||| |||||||||||||||||||||    
T  22459516 atgtgatataattgtatatacattac 22459541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 196 - 297
Target Start/End: Complemental strand, 19671931 - 19671830
Alignment:
Q  196 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgat 295  Q
    ||||||||||||||||||| ||| |||||||||||||||||||| || |||||| | |||||||||||||||||| |||||||| |||||||||| ||||    
T  19671931 ttcgatattattatatcatgatgttttgcatactgcctatgttgctgattgttaattaactaagctgcatgagtcagtctaagtcgttgaagatgttgat 19671832  T
Q  296 gt 297  Q
    ||    
T  19671831 gt 19671830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 199 - 297
Target Start/End: Original strand, 38138 - 38235
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||  || |||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38138 gatattattatgtcatgctgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 38235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 34 - 278
Target Start/End: Original strand, 7587 - 7835
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||| |||||   ||||||||||||||| | || ||||  |||| ||||||| ||||    ||||| ||||||||| |  ||    
T  7587 cgagttgatgtgagttgatcttggaggtaggaaactaagttgtttatcatgttgttgttgtttcagtaagcctgaattatatgatttaatgttgttgtta 7686  T
Q  134 atgttatataattgtatatacattacatgacttaagtttg-ataattga---gttgctgatttatattcgatattattatatcattatggtttgcatact 229  Q
    |||| ||||||||||||||||||||| ||| |||  | || ||  ||||   |||| ||| ||  ||| |||||| |||||||||  || ||||||||||    
T  7687 atgtgatataattgtatatacattacttgaattatatatgaatgtttgagatgttgatgacttgcatttgatattgttatatcatgttgttttgcatact 7786  T
Q  230 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||| ||||||||  | ||||||||||||||| || |||||||    
T  7787 gcctatgttgctgtttgtttattaactaagctgcatgattcagtctaag 7835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 20309180 - 20309108
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  20309180 atactgcctatgttgctatttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 20309108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 297
Target Start/End: Original strand, 23654409 - 23654507
Alignment:
Q  199 gatattattatatcattatgg-tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| |||| |||  |||| || ||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23654409 gatattattatgtcatgatgtatttgtatgctgcctatgctgttgtt-gttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 23654507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 298859 - 298933
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  298859 tttgtatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 298933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 219 - 297
Target Start/End: Original strand, 23103439 - 23103516
Alignment:
Q  219 gtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||| ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  23103439 gtttgtatactgcctatgttgctgttt-ttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 23103516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 23060589 - 23060513
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  23060589 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 23060513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 23285941 - 23285865
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  23285941 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 23285865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 278
Target Start/End: Complemental strand, 23791541 - 23791292
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||| | ||||  ||||||||||||||| |||| ||||  |||| ||||||| ||||    ||||| || |||||| | |||    
T  23791541 cgagttgatgtgagttgatcttgggggttggaaactaagttgtttatcttgttgttgttgtttcagtaagcctgaattatatgatttgatgttgttaata 23791442  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcatta--tggtttgcatac 228  Q
    |||| |||||| ||||||| |||||||||| |||  | | ||  ||||   |||| ||||||  ||| |||||| ||||||||| |  || |||   |||    
T  23791441 atgtgatataaatgtatatgcattacatgaattatatataatgtttgagatgttgttgatttgcatttgatatttttatatcatgaactgttttatgtac 23791342  T
Q  229 tgcctatgttgttgtttg-ttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  23791341 tgcctatgttgttgtttgcttatt-aactaagctacatgagtcggtctaag 23791292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 294
Target Start/End: Complemental strand, 22105485 - 22105412
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  22105485 tttgcatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 22105412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 114 - 297
Target Start/End: Original strand, 23708553 - 23708738
Alignment:
Q  114 atgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttga-taattgagttgc---tgatttatattcgatattattat 209  Q
    ||||||| |||||| ||||||||| |||||||||||||| |||||| ||| |||  ||||| |  ||||| ||    ||||||  | | |||||| ||||    
T  23708553 atgaattgatgttgtttataatgtgatataattgtatatgcattacttgaattatatttgaatgtttgagatgtcgatgatttgcaattgatattgttat 23708652  T
Q  210 atcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||  || |||||||||||||||||||| | | ||||||| ||||||||||| |||||||||||||||||   |||||||||||||    
T  23708653 atcatgttgttttgcatactgcctatgttgctatctgttatttaactaagctgcttgagtcggtctaagttg--aaagatgatgatgt 23708738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 23076518 - 23076442
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||| | |||||||||||||||    
T  23076518 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagtggatgaagatgatgatgt 23076442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 278
Target Start/End: Complemental strand, 23207544 - 23207296
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||| | ||| | ||||||||||| ||| ||| |||||  ||||| |||||| ||||    ||||| || |||||| | |||    
T  23207544 cgagttgatgtgagttgatcttgggggtaagaaactaagttgcttatcttactgttgttgttcaagtaagcctgaattatatgatttgatgttgttaata 23207445  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataa--ttga---gttgctgatttatattcgatattattatatcatta--tggtttgcat 226  Q
    |||| |||||| ||||||| |||||||||| |||   || ||||  ||||   || | ||||||  ||| |||||| ||||||||| |  || |||  ||    
T  23207444 atgtgatataaatgtatatgcattacatgaatta---tttataatgttgagatgtcgttgatttgcatttgatattgttatatcatgaactgttttatat 23207348  T
Q  227 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||||||||| ||||||||  | ||||||||||||||||||||||||||    
T  23207347 actgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 23207296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 227 - 297
Target Start/End: Original strand, 22731286 - 22731355
Alignment:
Q  227 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||| |||| |||||| ||||||||||||||||||||||||| ||| |||||||||||||||    
T  22731286 actgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaacttgatgaagatgatgatgt 22731355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 8946733 - 8946657
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| | || |||||  ||||||||||||||||||||||||||||| |||||||||||||||    
T  8946733 tttgtatactgcctatgttgctatt-gttatctaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 8946657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 22337168 - 22337115
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  22337168 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 22337115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 23040257 - 23040310
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  23040257 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 23040310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 297
Target Start/End: Complemental strand, 23660137 - 23660023
Alignment:
Q  182 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||| ||||||  ||| ||||||||||| ||||  || || | ||||||||||||||| |||| ||| || ||||||| | |||||||||||||||||||    
T  23660137 gttgttgatttgcatttgatattattatgtcatcctgtttcgtatactgcctatgttgctgtt-gttgtttaactaagatacatgagtcggtctaagttg 23660039  T
Q  282 ttgaagatgatgatgt 297  Q
     |||||||||||||||    
T  23660038 atgaagatgatgatgt 23660023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 22738247 - 22738300
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  22738247 ttgttatttaactaagctgcatgagtcggtctaagttgatcaagatgatgatgt 22738300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 45029958 - 45030016
Alignment:
Q  235 tgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  45029958 tgttgttgtt-gttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 45030016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 571447 - 571397
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  571447 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 571397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 6726045 - 6725995
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  6726045 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 6725995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 18808993 - 18808943
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  18808993 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 18808943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 23130912 - 23130862
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  23130912 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 23130862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 23133379 - 23133329
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  23133379 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 23133329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 23135640 - 23135590
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  23135640 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 23135590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 23709644 - 23709694
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  23709644 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 23709694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 23712125 - 23712175
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  23712125 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 23712175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 26505429 - 26505379
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  26505429 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 26505379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 26507907 - 26507857
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  26507907 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 26507857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 28577149 - 28577099
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  28577149 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 28577099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 34402634 - 34402684
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  34402634 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 34402684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 38967424 - 38967374
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  38967424 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 38967374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 39682363 - 39682313
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  39682363 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 39682313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 22413187 - 22413240
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||||||||||||||||||||  | ||||||| ||||||||||||||||||    
T  22413187 atactgcctatgttgttgtttgtttattaactaagttgcatgagtcggtctaag 22413240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 32215025 - 32215085
Alignment:
Q  235 tgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatg 296  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| | |||||| |||||    
T  32215025 tgttgttgtt-gttatttaactaagctgcatgagtcggtctaagttgattaagatgttgatg 32215085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 25108958 - 25108906
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||||||||||||||||  | ||||||||| ||||||||||||||||    
T  25108958 tactgcctatgttgttgtttgtttattaactaagctacatgagtcggtctaag 25108906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 43137349 - 43137301
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgat 292  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  43137349 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgat 43137301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 291
Target Start/End: Original strand, 21155172 - 21155219
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatga 291  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||    
T  21155172 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatga 21155219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 24529633 - 24529691
Alignment:
Q  235 tgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||||| |||||| ||||| ||||||||||||||||||||||| | ||||||||||    
T  24529633 tgttgttgtt-gttatttaactatgctgcatgagtcggtctaagttgattaagatgatga 24529691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 291
Target Start/End: Original strand, 24643062 - 24643109
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatga 291  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||    
T  24643062 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatga 24643109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 24367824 - 24367774
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | || |||||||    
T  24367824 ttgttatttaactaagctgcatgagtcggtctaagttgattaaaatgatga 24367774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 32039610 - 32039660
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| |||||||||||||||| |||||||||||| | ||||||||||    
T  32039610 ttgttatttaactaagctgcatgagccggtctaagttgattaagatgatga 32039660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 20520243 - 20520295
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||| ||||||| ||||||||  | ||||||||||||||||||||||||||    
T  20520243 tactgcatatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 20520295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 24898307 - 24898358
Alignment:
Q  244 ttgttattcaactaa-gctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| |||||| ||||||||||||||||||||||| | ||||||||||    
T  24898307 ttgttatttaactaaagctgcatgagtcggtctaagttgattaagatgatga 24898358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 24900790 - 24900841
Alignment:
Q  244 ttgttattcaactaa-gctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| |||||| ||||||||||||||||||||||| | ||||||||||    
T  24900790 ttgttatttaactaaagctgcatgagtcggtctaagttgattaagatgatga 24900841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 24903267 - 24903318
Alignment:
Q  244 ttgttattcaactaa-gctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| |||||| ||||||||||||||||||||||| | ||||||||||    
T  24903267 ttgttatttaactaaagctgcatgagtcggtctaagttgattaagatgatga 24903318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 24905744 - 24905795
Alignment:
Q  244 ttgttattcaactaa-gctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| |||||| ||||||||||||||||||||||| | ||||||||||    
T  24905744 ttgttatttaactaaagctgcatgagtcggtctaagttgattaagatgatga 24905795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 24908219 - 24908270
Alignment:
Q  244 ttgttattcaactaa-gctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| |||||| ||||||||||||||||||||||| | ||||||||||    
T  24908219 ttgttatttaactaaagctgcatgagtcggtctaagttgattaagatgatga 24908270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 276
Target Start/End: Complemental strand, 23287433 - 23287384
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 276  Q
    |||||||||||||| ||||  ||||| ||||||||||||||||||||||||    
T  23287433 tactgcctatgttgctgttgtttatt-aactaagctgcatgagtcggtcta 23287384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 32451981 - 32452031
Alignment:
Q  228 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||||| |||||| | || ||| ||||||||||||||||||||||    
T  32451981 ctgcctatgttgctgtttgatgtttaaccaagctgcatgagtcggtctaag 32452031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 26392451 - 26392403
Alignment:
Q  227 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 276  Q
    ||||||||||||| ||||  ||||| ||||||||||||||||||||||||    
T  26392451 actgcctatgttgctgttgtttatt-aactaagctgcatgagtcggtcta 26392403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 23004819 - 23004767
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||| ||||||||| ||||||||  | ||||||||||||||||||||| ||||    
T  23004819 tactacctatgttgctgtttgtttattaactaagctgcatgagtcggtttaag 23004767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 59
Target Start/End: Original strand, 23071815 - 23071843
Alignment:
Q  31 gttcgagttgatgtgagttgatcttagag 59  Q
    |||||||||||||||||||||||||||||    
T  23071815 gttcgagttgatgtgagttgatcttagag 23071843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 24697657 - 24697709
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||||| |||||||||||||  | ||||| | ||||||||||||||||||    
T  24697657 tactgcctacgttgttgtttgtttattaactatgttgcatgagtcggtctaag 24697709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 34 - 297
Target Start/End: Original strand, 13210184 - 13210448
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaatt-aatgttgcttat 132  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||  |||||||||| ||||||| |||||||| ||||||||||||    
T  13210184 cgagttgatgtgagttgatcctagaggttagaaactaagttgtttatcttgttgttaacattccagtaaggctgatgcatatgaattcaatgttgcttat 13210283  T
Q  133 aatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcc 232  Q
    ||||||||||||||||||||||||||||||||||| |||||||| || ||||| ||||||  |||||||||||||||||||| |||||||||||||||||    
T  13210284 aatgttatataattgtatatacattacatgacttatgtttgatatttaagttgttgatttgcattcgatattattatatcatgatggtttgcatactgcc 13210383  T
Q  233 tatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13210384 tatgttgctatttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 13210448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 34 - 293
Target Start/End: Complemental strand, 16097594 - 16097332
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||  |||||||||||||||||||| |||||||| |||||| |||||    
T  16097594 cgagttgatgtgagttgatcttagagattagaaactaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaattgatgttgtttata 16097495  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||   |||| ||| ||  |||||||||| |||||| || ||| |||||||| ||    
T  16097494 atgttatataattgtatatacattacatgaattatgtttgatatttgagatgttgatgacttgcattcgatattgttatatgatgatgatttgcatattg 16097395  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  16097394 cctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 16097332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 69 - 293
Target Start/End: Original strand, 12174152 - 12174376
Alignment:
Q  69 taagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaa 168  Q
    ||||||||||| |||||||||  |||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||     
T  12174152 taagttgtttagcttgctgttgttgttccagtaagactgatgcatatgaatcaatgttgtttataatgttatataattgtatatacattacatgacttat 12174251  T
Q  169 gtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgag 268  Q
    |||||||| |||||||| || |||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  12174252 gtttgatatttgagttgttgttttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcatgag 12174351  T
Q  269 tcggtctaagttgttgaagatgatg 293  Q
    ||||||||||||| ||| |||||||    
T  12174352 tcggtctaagttgatgatgatgatg 12174376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 34 - 293
Target Start/End: Complemental strand, 16104045 - 16103784
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||  ||||||||||||||| || | |||||||| |||||| |||||    
T  16104045 cgagttgatgtgagttaatcttagaggttagaaactaagttgtttatcttgctgttgttgttccagtaagactaatccatatgaattgatgttgtttata 16103946  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgc 231  Q
    ||||||||||||| ||||||||||| |||| ||| |||||||| ||||| || || |  ||  |||||||||| ||||||||| ||| ||||||||||||    
T  16103945 atgttatataattttatatacattaaatgaattatgtttgatatttgagatgttgttgattgcattcgatattgttatatcatgatgatttgcatactgc 16103846  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||| |||| ||| || ||||||||||||||||||||||||||||| ||| |||||||    
T  16103845 ctatgttgctgttcgttgtttaactaagctgcatgagtcggtctaagttgatgatgatgatg 16103784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 34 - 290
Target Start/End: Complemental strand, 32307933 - 32307684
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||| | ||||| |||||||||||||||||||||||||||||| |||||    
T  32307933 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgtcattgttctagtaagactgatgcttatgaattaatgttgtttata 32307834  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgc 231  Q
    |||        |||||||||||||| |||  ||| | |||||||||||| || || |  ||  |||||||||| ||||||||| ||| ||||||||||||    
T  32307833 atg--------ttgtatatacattaaatggattatg-ttgataattgagatgttgttgattgcattcgatattgttatatcatgatgatttgcatactgc 32307743  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatg 290  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  32307742 ctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgatgatgatg 32307684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 36 - 293
Target Start/End: Complemental strand, 9513171 - 9512924
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataat 135  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||| |||||||    
T  9513171 agtttatgtgagttaatcttagaggttagaaactaagttgtttaccttgttgttattgttccagtaagactgatgcatatgaattgatgttgtttataat 9513072  T
Q  136 gttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctat 235  Q
    |        || ||||||||||| |||  ||| | ||||||| |||| || ||| ||  |||||||||| ||||||||| ||| ||||||||||||||||    
T  9513071 g--------ttttatatacattaaatggattatg-ttgataaatgagatgttga-ttgcattcgatattgttatatcatgatgatttgcatactgcctat 9512982  T
Q  236 gttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||| |||||||| || |||||||||||||||||||||||||| || ||| |||||||    
T  9512981 gttgctgtttgttgtttaactaagctgcatgagtcggtctaagatgatgatgatgatg 9512924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 36 - 293
Target Start/End: Complemental strand, 9521146 - 9520899
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataat 135  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||| |||||||    
T  9521146 agtttatgtgagttaatcttagaggttagaaactaagttgtttaccttgttgttattgttccagtaagactgatgcatatgaattgatgttgtttataat 9521047  T
Q  136 gttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctat 235  Q
    |        |  ||||||||||| |||  ||| | ||||||| |||| || ||| ||  |||||||||| ||||||||| ||| ||||||||||||||||    
T  9521046 g--------tgttatatacattaaatggattatg-ttgataaatgagatgttga-ttgcattcgatattgttatatcatgatgatttgcatactgcctat 9520957  T
Q  236 gttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||| |||||||| || |||||||||||||||||||||||||| || ||| |||||||    
T  9520956 gttgctgtttgttgtttaactaagctgcatgagtcggtctaagatgatgatgatgatg 9520899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 34 - 297
Target Start/End: Complemental strand, 15471189 - 15470927
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    ||||||||||| || ||||||| ||||||| ||||||||||||||| |||| ||||  |||| ||||||| ||||    |||||  ||| |||| |  ||    
T  15471189 cgagttgatgttagatgatcttggaggttagaaactaagttgtttatcttgttgttgttgtttcagtaagcctgaattatatgatctaa-gttgttgtta 15471091  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||||||||||||||||||||||| ||| |||||||  ||||| || ||||   ||  |||||||||| ||||||||| ||| |||||||||||    
T  15471090 atgttatataattgtatatacattacatgaattatgtttgatgtttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactg 15470991  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||||||   |||||||||||||||||    
T  15470990 cctatgttgctgtctgttatttaactaagctgcatgagtcggtctaa---gttgaagatgatgatgt 15470927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 34 - 290
Target Start/End: Original strand, 1644539 - 1644787
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| |||||||||||||||||||| |||||||| |||||| |||||    
T  1644539 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgttgttattgttccagtaagactgatgcatatgaattgatgttgtttata 1644638  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||        |||||||||||||| |||  ||| | ||||||||||||   ||| ||| || ||||||||||| |||||| || ||| |||||||||||    
T  1644639 atg--------ttgtatatacattaaatggattatg-ttgataattgagatattgttga-ttgtattcgatattgttatataatgatgatttgcatactg 1644728  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatg 290  Q
    |||||||||||| |||||||| ||||||||  ||| ||| ||||||||||| ||| ||||    
T  1644729 cctatgttgttg-ttgttatttaactaagcaacataagttggtctaagttgatgacgatg 1644787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 34 - 182
Target Start/End: Original strand, 49389485 - 49389633
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||| |||| ||||  |||||||||||||||||||| |||||||| |||||| |||||    
T  49389485 cgagttgatgtgtgttgatcttagaggttagaaactaagttgtttatcttgttgttgttgttccagtaagactgatgcatatgaattgatgttgtttata 49389584  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgag 182  Q
    ||||||||||||||||||||||||| |||| ||| |||||||| |||||    
T  49389585 atgttatataattgtatatacattaaatgaattatgtttgatagttgag 49389633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 34 - 293
Target Start/End: Original strand, 49667940 - 49668193
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||| | |||||||||||||||||||| ||||| || ||||||  ||||    
T  49667940 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgtcattgttccagtaagactgatgcatatgagttgatgttgtatata 49668039  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttat---attcgatattattatatcattatggtttgcatactg 230  Q
    |||         ||||||||| ||| |||  ||| | ||||||| |||| || |  || ||   |||||||||| ||||||||| ||| |||||||||||    
T  49668040 atg--------ctgtatatactttaaatggattatg-ttgataaatgagatgtttgttgattgcattcgatattgttatatcatgatgatttgcatactg 49668130  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||| || ||| |||||||    
T  49668131 cctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagatgatgatgatgatg 49668193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 36 - 297
Target Start/End: Complemental strand, 14234753 - 14234487
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttc--cagtaagactgatgcttatgaattaatgttgcttata 133  Q
    ||||||||| |||||||||| ||||||| |||||||||| |||| |||| ||||  ||||   ||||||| ||||    | | |  |||||||| |  ||    
T  14234753 agttgatgttagttgatcttggaggttagaaactaagttatttatcttgttgttgttgttgttcagtaagcctgaattgtttaatctaatgttgttgcta 14234654  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||||||||||||||||||||||| ||| |||||||  ||  || |||| ||| ||  |||||||||| ||||||||| ||| |||||||||||    
T  14234653 atgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactg 14234554  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||| || |||||||| ||||||||||||||| || |||||||||| | |||||||||||||    
T  14234553 cctatgttgctgcttgttatttaactaagctgcatgaatcagtctaagttgattaagatgatgatgt 14234487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 12934167 - 12934268
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||| | |||||||||||||||||||| |||||||| |||||| |||||    
T  12934167 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgtcattgttccagtaagactgatgcatatgaattgatgttgtttata 12934266  T
Q  134 at 135  Q
    ||    
T  12934267 at 12934268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 122 - 278
Target Start/End: Original strand, 52523669 - 52523831
Alignment:
Q  122 atgttgcttataatgttatataattgtatatacattacatgacttaagtttga-taattgag---ttgctgatttatattcgatattattatatcatta- 216  Q
    |||||| ||||||||| |||||||||||||| |||||| ||| |||  | ||| |  |||||   ||| ||||||  |||||||||| ||||||||| |     
T  52523669 atgttgtttataatgtgatataattgtatatgcattacttgaattatatatgaatgtttgagatgttgttgatttgcattcgatattgttatatcatgaa 52523768  T
Q  217 -tggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
     || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  52523769 ctgttttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaag 52523831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 278
Target Start/End: Original strand, 37251022 - 37251270
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||| | ||| | ||||||||||||||| ||| |||||  |||||||||||| ||||    ||||| || |||||| | |||    
T  37251022 cgagttgatgtgagttgatcttgggggtaagaaactaagttgtttatcttactgttgttgttccagtaagtctgaattatatgatttgatgttgttaata 37251121  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcatta--tggtttgcatac 228  Q
    |||| |||||| ||||||| |||||||||| |||  | ||||  ||||   |||| ||||||  ||| |||||| ||||||||| |  || |||  ||||    
T  37251122 atgtgatataaatgtatatgcattacatgaattatttatgat-gttgagatgttgttgatttgcatttgatattgttatatcatgaactgttttatatac 37251220  T
Q  229 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||||||| ||||||||  | ||||||||||||||| ||||||||||    
T  37251221 tgcctatgttgctgtttgtttattaactaagctgcatgactcggtctaag 37251270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 12399285 - 12399209
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12399285 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 12399209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 24340743 - 24340844
Alignment:
Q  196 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgat 295  Q
    ||||||||||||||||||| ||| | |||||||||| ||||||| || |||||| | |||||||||||||||||| |||||||| |||||||||| ||||    
T  24340743 ttcgatattattatatcatgatgttgtgcatactgcatatgttgctgattgttaattaactaagctgcatgagtcagtctaagtcgttgaagatgttgat 24340842  T
Q  296 gt 297  Q
    ||    
T  24340843 gt 24340844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 20698480 - 20698556
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  20698480 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 20698556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 196 - 297
Target Start/End: Complemental strand, 23274788 - 23274687
Alignment:
Q  196 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgat 295  Q
    ||||||||||||||||||| ||| |||||||||||||||||||| || |||||| | ||||||| |||||||||| ||||||||  | ||||||| ||||    
T  23274788 ttcgatattattatatcatgatgttttgcatactgcctatgttgctgattgttaattaactaagttgcatgagtcagtctaagtcatcgaagatgttgat 23274689  T
Q  296 gt 297  Q
    ||    
T  23274688 gt 23274687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 26686963 - 26686887
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||  ||||||||||||||    
T  26686963 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaagttgaagaagatgatgatgt 26686887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 199 - 297
Target Start/End: Complemental strand, 18438632 - 18438534
Alignment:
Q  199 gatattattatatcattatggttt-gcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||  || ||| | ||||||||||||||| |||| |||||| ||||||||| ||||||||||||||||||| |||||||||||||||    
T  18438632 gatattattatatcatgctgtttttgtatactgcctatgttgctgtt-gttatttaactaagctacatgagtcggtctaagttgatgaagatgatgatgt 18438534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 199 - 297
Target Start/End: Original strand, 23083384 - 23083482
Alignment:
Q  199 gatattattatatcattatggttt-gcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||| || ||| | ||||||||||||||| | || |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  23083384 gatattattatgtcattctgtttttgtatactgcctatgttgctatt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 23083482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 27165337 - 27165250
Alignment:
Q  207 tatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    ||||||||  || ||||||||||| |||| ||| ||||||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  27165337 tatatcatgttgttttgcatactgtctatattgctgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 27165250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 37642287 - 37642386
Alignment:
Q  198 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||| ||| |||||||||||||||||||| || |  |||   |||||||||||||||||||||| |||| |||||||||| ||||||    
T  37642287 cgatattattatatcatgatgttttgcatactgcctatgttgctgatcattaactaactaagctgcatgagtcggtccaagtcgttgaagatgttgatgt 37642386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 199 - 294
Target Start/End: Original strand, 53301574 - 53301669
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||| |||||||||  || ||||||||||| |||||||| ||||||||||| ||||||| || |||||||||||||||||| | ||||||||||    
T  53301574 gatattgttatatcatgttgttttgcatactgtctatgttgctgtttgttatttaactaagttgtatgagtcggtctaagttgattaagatgatga 53301669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 199 - 297
Target Start/End: Original strand, 11424783 - 11424880
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||| |||| ||||  || |||| ||||||||||||||| |||| |||||| |||||||||||||||||| |||||||||| |||||||||||||||    
T  11424783 gatattgttatgtcatgctgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcagtctaagttgatgaagatgatgatgt 11424880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 13442350 - 13442274
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| |||||||||||||||  ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  13442350 tttgtatactgcctatgttgccgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 13442274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 14972930 - 14972854
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  14972930 tttgtatactgcctgtgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 14972854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 232 - 294
Target Start/End: Complemental strand, 28194755 - 28194693
Alignment:
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  28194755 ctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 28194693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 17487909 - 17487856
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  17487909 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 17487856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 17499391 - 17499338
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  17499391 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 17499338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 43841008 - 43840932
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| |||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||| ||||||| |||||||    
T  43841008 tttgtatactgtctatgttgttgtt-gttatttaactaagctgcatgagtcggtttaagttgatgaagataatgatgt 43840932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 297
Target Start/End: Original strand, 43550456 - 43550644
Alignment:
Q  112 ttatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttga-taattgag---ttgctgatttatattcgatattatt 207  Q
    |||||| || |||||| ||||| ||| ||||||||||||||||||||| ||| |||  | ||| ||||||||   ||| ||| ||  ||| |||||||||    
T  43550456 ttatgatttgatgttg-ttatattgtgatataattgtatatacattacttgaattatatgtgaataattgagacgttgttgacttgcatttgatattatt 43550554  T
Q  208 atatcattatggttt-gcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    || ||||  || ||| ||||||||| ||||||| |||   ||||| |||||||||||||||||||||||||| ||||||| ||||||||||    
T  43550555 atgtcatgttgtttttgcatactgcatatgttgctgtca-ttatttaactaagctgcatgagtcggtctaagatgttgaatatgatgatgt 43550644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 14572686 - 14572605
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    ||||||||||| ||||  || |||| |||||| |||||||| |||| |||||| |||||||||||||||||||||||||||||    
T  14572686 gatattattatgtcatgctgttttgtatactgtctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttg 14572605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 294
Target Start/End: Complemental strand, 17672687 - 17672626
Alignment:
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  17672687 ctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 17672626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 1465266 - 1465395
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactg--atgcttatgaattaatgttgctta 131  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||||||| || |    |||||||||| |||   || ||||    |||||||| | |    
T  1465266 cgagttgatgtgagttgatcttggaggttagaaactaagttatttaccttgatgctgtcattccagtaagcctggattgtttat--tctaatgttgatga 1465363  T
Q  132 taatgttatataattgtatatacattacatga 163  Q
    |||||||||| |||||||||||||||||||||    
T  1465364 taatgttatacaattgtatatacattacatga 1465395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 22147547 - 22147646
Alignment:
Q  198 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||| ||| ||||||||| ||||| |||| || |  |||   ||||||||||||||| |||||| |||| |||||||||| ||||||    
T  22147547 cgatattattatatcatgatgttttgcataccgcctacgttgctgatcattaactaactaagctgcatgactcggtccaagtcgttgaagatgttgatgt 22147646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 294
Target Start/End: Original strand, 24153232 - 24153326
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    ||||||||||| ||||  || |||| ||||| ||||||||| | |  |||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  24153232 gatattattatgtcatgctgttttgtatactacctatgttgctatc-gttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 24153326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 6469246 - 6469296
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  6469246 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 6469296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 7781459 - 7781509
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  7781459 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 7781509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 8499568 - 8499518
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  8499568 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 8499518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 9707719 - 9707769
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  9707719 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 9707769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 10557035 - 10556985
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  10557035 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 10556985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 15412479 - 15412429
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  15412479 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 15412429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 15977565 - 15977515
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  15977565 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 15977515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 17463228 - 17463178
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  17463228 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 17463178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 17737286 - 17737236
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  17737286 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 17737236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 28848723 - 28848773
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  28848723 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 28848773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 29172695 - 29172745
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  29172695 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 29172745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 34159376 - 34159326
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  34159376 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 34159326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 36166648 - 36166598
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  36166648 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 36166598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 45577950 - 45578000
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  45577950 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 45578000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 45607019 - 45607069
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  45607019 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 45607069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 55476541 - 55476491
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  55476541 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 55476491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 55500992 - 55500942
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  55500992 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 55500942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 25476453 - 25476506
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||| || ||||||||| ||||||||||||||||||| |||||||||||||||    
T  25476453 ttgttttttaactaagctacatgagtcggtctaagttgatgaagatgatgatgt 25476506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 16282923 - 16282971
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgat 292  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  16282923 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgat 16282971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 22110402 - 22110454
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||||||| ||||||||  | ||||||||||||||||||||||||||    
T  22110402 tactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 22110454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 41123940 - 41123892
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgat 292  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||    
T  41123940 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgat 41123892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 43926029 - 43925977
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||||||| ||||||||  | ||||||||||||||||||||||||||    
T  43926029 tactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 43925977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 13544075 - 13544024
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgat 295  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||| ||||    
T  13544075 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgttgat 13544024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 279
Target Start/End: Complemental strand, 42386486 - 42386428
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagt 279  Q
    |||| ||||||||||||||| |||| |||||| |||||| ||||||||||||||||||||    
T  42386486 tttgtatactgcctatgttgctgtt-gttatttaactaaactgcatgagtcggtctaagt 42386428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 8899144 - 8899094
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||| ||| | ||||||||||    
T  8899144 ttgttatttaactaagctgcatgagtcggtctaaattgattaagatgatga 8899094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 10247835 - 10247885
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| |||||||||| |||||||||||||||||| | ||||||||||    
T  10247835 ttgttatttaactaagctgtatgagtcggtctaagttgattaagatgatga 10247885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 12119837 - 12119887
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||| ||||||||||||||||||||||||| | ||||||||||    
T  12119837 ttgttatttaacaaagctgcatgagtcggtctaagttgattaagatgatga 12119887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 12567610 - 12567564
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatg 290  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||    
T  12567610 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatg 12567564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 16454393 - 16454443
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||| ||||||||||||||||||||| | ||||||||||    
T  16454393 ttgttatttaactaagttgcatgagtcggtctaagttgattaagatgatga 16454443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 38962003 - 38962053
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | || |||||||    
T  38962003 ttgttatttaactaagctgcatgagtcggtctaagttgattaaaatgatga 38962053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 40213788 - 40213838
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||| ||||||||||||||||||| | ||||||||||    
T  40213788 ttgttatttaactaagctacatgagtcggtctaagttgattaagatgatga 40213838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 44494859 - 44494809
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||| ||||||||| | ||||||||||    
T  44494859 ttgttatttaactaagctgcatgagtcgatctaagttgattaagatgatga 44494809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 50242872 - 50242822
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | || |||||||    
T  50242872 ttgttatttaactaagctgcatgagtcggtctaagttgattaaaatgatga 50242822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 281
Target Start/End: Complemental strand, 21618499 - 21618462
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||||| |||||||||||||||||||||||||||||    
T  21618499 ttgttatttaactaagctgcatgagtcggtctaagttg 21618462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 13151902 - 13151953
Alignment:
Q  244 ttgttattcaactaa-gctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| |||||| ||||||||||||||||||||||| | ||||||||||    
T  13151902 ttgttatttaactaaagctgcatgagtcggtctaagttgattaagatgatga 13151953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 13154367 - 13154418
Alignment:
Q  244 ttgttattcaactaa-gctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| |||||| ||||||||||||||||||||||| | ||||||||||    
T  13154367 ttgttatttaactaaagctgcatgagtcggtctaagttgattaagatgatga 13154418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 606378 - 606428
Alignment:
Q  228 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||||| ||||||||  | ||||||||||||||||||||| ||||    
T  606378 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtataag 606428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 278
Target Start/End: Complemental strand, 12377993 - 12377940
Alignment:
Q  225 atactgcctatgttgttgtttgt-tattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||||||||||| ||||||| |||| |||||||||| |||||||||||||||    
T  12377993 atactgcctatgttgctgtttgtctatt-aactaagctgtatgagtcggtctaag 12377940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 17446767 - 17446816
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| |||||||||||||||||| |||||||||| | ||||||||||    
T  17446767 ttgttatttaactaagctgcatgagtc-gtctaagttgattaagatgatga 17446816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 278
Target Start/End: Original strand, 53070765 - 53070799
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||| ||||||||||||||||||||||||||    
T  53070765 ttgttatttaactaagctgcatgagtcggtctaag 53070799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 14576882 - 14576937
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||| |||||||| |||| |||||| ||||||| || ||||||||||||||||||    
T  14576882 atactgtctatgttgctgtt-gttatttaactaagttgaatgagtcggtctaagttg 14576937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 177; Significance: 2e-95; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 31 - 250
Target Start/End: Original strand, 29132 - 29354
Alignment:
Q  31 gttcgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctt 130  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29132 gttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctt 29231  T
Q  131 ata---atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcata 227  Q
    |||   |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||| |||    
T  29232 ataattatgttatataattgtatatacagtacatgacttaagtttgataattgagttgctgatttacattcgatattattatatcatgatagtttgaata 29331  T
Q  228 ctgcctatgttgttgtttgttat 250  Q
    || ||||||||| ||||||||||    
T  29332 ctacctatgttgctgtttgttat 29354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 34 - 281
Target Start/End: Original strand, 7931 - 8179
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| ||||||||   |||| ||||||| ||||    ||||| ||||||||| | |||    
T  7931 cgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgctgt---tgtttcagtaagcctgaattatatgatttaatgttgttgata 8027  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcatact 229  Q
    |||||||||| ||||||||||||||||||| |||  | ||||  | ||| |||| |||||| |||| |||||| ||||||||| |  ||||||| |||||    
T  8028 atgttatatagttgtatatacattacatgaattatatatgatgttgtgatgttgttgatttgtatttgatattgttatatcatgaactggtttgtatact 8127  T
Q  230 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||||||| ||||||||  | |||||||||||||||||||||||||||||    
T  8128 gcctatgttgctgtttgtttgttaactaagctgcatgagtcggtctaagttg 8179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 31 - 242
Target Start/End: Original strand, 2297 - 2508
Alignment:
Q  31 gttcgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgctt 130  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2297 gttcgagtttatgtgagttgatcttagaggttagaaactaagttttttaccttgctattaatgttccagtaagactgatgcttatgaattaatgttgctt 2396  T
Q  131 ataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |    
T  2397 ataatgttatataattgtatatacattaaatgacttaagtttgataattgagttgctgatttacattcgatattattatatcatgatggtttgcatacgg 2496  T
Q  231 cctatgttgttg 242  Q
     ||| |||||||    
T  2497 tctaagttgttg 2508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 171; Significance: 8e-92; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 36 - 278
Target Start/End: Complemental strand, 7073 - 6831
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataat 135  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||  |||||||||||||||||||| ||||||||||||||| |||||||    
T  7073 agttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaattaatgttgtttataat 6974  T
Q  136 gttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctat 235  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||  |||| ||||| ||||||||| ||| ||||||||||||||||    
T  6973 gttatataattgtatatacattacatgacttatgtttgatatttgagttgttgatttgcattcaatattgttatatcatgatgatttgcatactgcctat 6874  T
Q  236 gttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||| ||||||||||| |||| |||||||||||||||||||||    
T  6873 gttgctgtttgttatttaactgagctgcatgagtcggtctaag 6831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 175
Target Start/End: Complemental strand, 8281 - 8140
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||| |  |||||||||||||| | |||||||  |||| ||||||| ||||    ||| |  |||||||| |  ||    
T  8281 cgagttgatgtgagttgatcttagaggtaaggaactaagttgtttatcctgctgttgttgtttcagtaagcctgaattatataatctaatgttgttgtta 8182  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgat 175  Q
    |||||||||||||||||||||||||||||| ||| |||||||    
T  8181 atgttatataattgtatatacattacatgaattatgtttgat 8140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 34 - 293
Target Start/End: Original strand, 45647 - 45909
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||||| |||||||||||||||  ||||||| | |||||||||||||||||||| |||||||| |||||| |||||    
T  45647 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatattgctgtaattgttccagtaagactgatgcatatgaattgatgttgtttata 45746  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||||||   |||| ||| ||| |||||||||| ||||||||| ||| |||||||||||    
T  45747 atgttatataattgtatatacatcacatgaattatgtttgataattgagatgttgatgacttacattcgatattgttatatcatgatgatttgcatactg 45846  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    ||||| ||  ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  45847 cctatttttctgtttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 45909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 153; Significance: 4e-81; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 34 - 281
Target Start/End: Original strand, 10396 - 10646
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||  |||||||||||||||||||| |||||||| |||||| |||||    
T  10396 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgttgttgttgttccagtaagactgatgcatatgaattgatgttgtttata 10495  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||   |||| ||| ||  |||||||||| ||||||||| ||| |||||||||||    
T  10496 atgttatataattgtatatacattacatgaattatgtttgatatttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactg 10595  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    ||||||||| ||||||||||| ||||||||||||| |||||||||||||||    
T  10596 cctatgttgctgtttgttatttaactaagctgcataagtcggtctaagttg 10646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 149; Significance: 1e-78; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 34 - 281
Target Start/End: Complemental strand, 130171 - 129921
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||  |||||||||||||||||||| |||||||| |||||| ||| |    
T  130171 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaattgatgttgtttaca 130072  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||   |||| ||| ||  |||||||||| ||||||||| ||| |||||||||||    
T  130071 atgttatataattgtatatacattacatgaattatgtttgatatttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactg 129972  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    ||||||||| ||| ||||||| ||||||| |||||||||||||||||||||    
T  129971 cctatgttgctgtgtgttatttaactaagatgcatgagtcggtctaagttg 129921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 278
Target Start/End: Original strand, 60760 - 60818
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||| ||||||||||||||| ||||||||  | ||||||||||||||||||||| ||||    
T  60760 tttgtatactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtttaag 60818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 129 - 297
Target Start/End: Original strand, 1022 - 1190
Alignment:
Q  129 ttataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatac 228  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  1022 ttataatgttatataattgtatatacattacatgacttaagtctgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatac 1121  T
Q  229 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  1122 tgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 1190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 141; Significance: 6e-74; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 34 - 293
Target Start/End: Complemental strand, 160949 - 160688
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||  |||| | ||||||||||||| |||||||| |||||| |||||    
T  160949 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgttgttgttgtttcggtaagactgatgcatatgaattgatgttgtttata 160850  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||||||||||||| ||||||||||||| |||||||| ||||   |||| ||| ||  ||| |||||| ||||||||| ||| |||||||||||    
T  160849 atgttatataattgtatatatattacatgacttatgtttgatatttgacatgttgttga-ttgcatttgatattgttatatcatgatgatttgcatactg 160751  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    ||||||||| || |||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  160750 cctatgttgctgattgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 160688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 85692 - 85742
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| |||||||||||||||||||||||||| || | ||||||||||    
T  85692 ttgttatttaactaagctgcatgagtcggtctaagatgattaagatgatga 85742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 501134 - 501088
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatg 290  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||    
T  501134 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatg 501088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 34 - 293
Target Start/End: Complemental strand, 394 - 133
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||||| ||||| ||||||| | |||||||||  ||||| ||| |||||||| | |||||||| |||||| |||||    
T  394 cgagttgatgtgagttgatcttagaggttagaaactgagttgtt-atcttgctgttgttgttctagtgagactgatacatatgaattgatgttgtttata 296  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    || ||||||||||||||||||||||||||| ||| |||||||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||||||    
T  295 atattatataattgtatatacattacatgaattatgtttgatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatactg 196  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||||| ||| |||||||    
T  195 cctatgttgttgtttgttgtttaactaagctgcatgaatcggtctaagttgatgatgatgatg 133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 128; Significance: 4e-66; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 34 - 281
Target Start/End: Original strand, 22529 - 22775
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||||| ||||||||||||||  |||| ||||  |||||||||||||||||||| |||    | |||||| |||||    
T  22529 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttgtcttgatgttgctgttccagtaagactgatgcatat----tgatgttgtttata 22624  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||| || ||||   ||  |||||||||| ||||||||| ||| |||||||||||    
T  22625 atgttatataattgtatatacattacatgaattatgtttgatatttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactg 22724  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
     |||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  22725 tctatgtcgctgtttgttatttaactaagctgcatgagtcggtctaagttg 22775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 82122 - 82072
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||| ||||||||||||||||||| | ||||||||||    
T  82122 ttgttatttaactaagcttcatgagtcggtctaagttgattaagatgatga 82072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 34 - 281
Target Start/End: Complemental strand, 1348 - 1098
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||| | |||||||||| |||| |||| ||||  |||||||||||||||||||  ||||| || |||||| |  ||    
T  1348 cgagttgatgtgagttgatcttagaggtaagaaactaagttttttatcttgttgttgttgttccagtaagactgatgtatatgatttgatgttgttgtta 1249  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||| ||||||||||||| ||||| ||| |||||||  ||||   |||| |||  | ||||||||||| ||||||||| ||| |||||||||||    
T  1248 atgttatatagttgtatatacattccatgaattatgtttgatgtttgaaatgttgatgacctgtattcgatattgttatatcatgatgatttgcatactg 1149  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1148 cctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagttg 1098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 34 - 297
Target Start/End: Complemental strand, 13032 - 12766
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||  |||||||||||| ||||    |||||  |||||||| |  ||    
T  13032 cgagttgatgtgagttgatcttagaggttagaaactaagtggtttatcttgctgttgttgttccagtaagcctgaattatatgatctaatgttgttatta 12933  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataat--tga-gttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||||||||||||||||||||||| ||| |||||||  |  ||| |||| ||| ||  |||||||||| ||||||||| ||| |||||||| ||    
T  12932 atgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgatgatttgcatattg 12833  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||  ||||||||||    
T  12832 cctatgttgttgtttgttatttagctaagctgcatgagtcggtctaagttgatgattatgatgatgt 12766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 116; Significance: 5e-59; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 36 - 297
Target Start/End: Complemental strand, 6798 - 6535
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttataa 134  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||  |||| ||||||| |||| |   |||||  |||||||| |  |||    
T  6798 agttgatgtgagttgatcttagaggttaaaaactaagttgtt-atcttgctgttgttgtttcagtaagcctgaattaatatgatctaatgttgttgttaa 6700  T
Q  135 tgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgc 231  Q
    || ||||||||||||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||||||||||||    
T  6699 tggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatactgc 6601  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  6600 ctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatgatgt 6535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 34 - 281
Target Start/End: Complemental strand, 8735 - 8482
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    ||||||||||||| |||||||||||||| | ||||||||||||||| ||||||| |  |||||||||||||||||||  |||||||| |||||| |||||    
T  8735 cgagttgatgtgaattgatcttagaggtaagaaactaagttgtttatcttgctgatgttgttccagtaagactgatgtatatgaattgatgttgtttata 8636  T
Q  134 atgttatata--attgtatatacattacatgacttaagtttg-ataattga---gttgctgatttatattcgatattattatatcattatggtttgcata 227  Q
    |||| |||||  |||||||||||||||| ||| |||  | || ||| ||||   |||| ||| ||  ||| |||||| |||||||||  || ||||||||    
T  8635 atgtgatataatattgtatatacattacttgaattatatatgaatatttgagatgttgatgacttgcatttgatattgttatatcatgctgttttgcata 8536  T
Q  228 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8535 ctgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagttg 8482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 36 - 297
Target Start/End: Original strand, 5980 - 6244
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataat 135  Q
    ||||||||| |||||||||| |||||||||||||||||| |||| |||||||||| |||| ||||||| ||||    ||| |  |||||||| |  ||||    
T  5980 agttgatgttagttgatcttggaggttaaaaactaagttatttatcttgctgttattgtttcagtaagcctgaattgtataatctaatgttgttgctaat 6079  T
Q  136 gttatataattgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatactgcc 232  Q
    |||||||||||||||||||||||||||| ||| |||||||  ||  || |||  ||| ||  |||||||||| ||||||||| ||| |||||||||||||    
T  6080 gttatataattgtatatacattacatgaattatgtttgatgtttatgatgttaatgacttgcattcgatattgttatatcatgatgatttgcatactgcc 6179  T
Q  233 tatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||  ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  6180 tatgttactgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 6244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 36 - 293
Target Start/End: Complemental strand, 19528 - 19268
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgct-tatgaattaatgttgcttataa 134  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||  |||| ||||||  |||||    |||||  |||||||| |  |||    
T  19528 agttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgatgttgttgtttcagtaaccctgatttaatatgatctaatgttgttgttaa 19429  T
Q  135 tgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgc 231  Q
    || ||||||||||||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||||||||||||    
T  19428 tggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatactgc 19330  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  19329 ctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 19268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 106; Significance: 5e-53; HSPs: 8)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 34 - 293
Target Start/End: Complemental strand, 100640 - 100378
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttat 132  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||||| |||| ||||  |||| ||||||| || | |   |||||  |||||||| |  |    
T  100640 cgagttgatgtgacttgctcttagaggttagaaactaagttgtttatcttgttgttgttgtttcagtaagcctaaattaatatgatctaatgttgttgtt 100541  T
Q  133 aatgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatact 229  Q
    |||||||||||||||||||||||||| |||| ||| |||  ||| |||||   ||| ||||||  |||||||||||||||||||| ||| ||||||||||    
T  100540 aatgttatataattgtatatacattatatgaattatgtta-atatttgagatgttgttgatttgcattcgatattattatatcatgatgatttgcatact 100442  T
Q  230 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  100441 gcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 100378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 34 - 293
Target Start/End: Original strand, 40029 - 40291
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttat 132  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||  |||| ||||||| |||| |   |||||  | |||||| |  |    
T  40029 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgatgttgttgtttcagtaagcctgaattaatatgatcttatgttgttgtt 40128  T
Q  133 aatgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatact 229  Q
    |||| ||||||||||||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||||| ||||    
T  40129 aatggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcctact 40227  T
Q  230 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||||| ||||| ||||| |||||||||||||||||| |||||||||| ||| |||||||    
T  40228 gcctatgttgctgtttattatttaactaagctgcatgagtcagtctaagttgatgatgatgatg 40291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 119948 - 119875
Alignment:
Q  224 catactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  119948 catactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 119875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 293
Target Start/End: Complemental strand, 101581 - 101503
Alignment:
Q  215 tatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||| ||| |||||||    
T  101581 tatggtttgcatactgcctatgttgttgtttgttgtttaactaagctgcatgaatcggtctaagttgatgatgatgatg 101503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 101659 - 101616
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtt 77  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  101659 cgagttgatgtgagttgatcttagaggttagaaactaagttgtt 101616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 44504 - 44454
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  44504 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 44454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 94461 - 94411
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  94461 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 94411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 17552 - 17598
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatg 290  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||    
T  17552 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatg 17598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 34 - 281
Target Start/End: Complemental strand, 10793 - 10543
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| |||||||||  |||| ||||||| ||||    ||| |  |||||||| |  ||    
T  10793 cgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattatataatctaatgttgttgtta 10694  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||| ||||||||||||||||||||||||| ||| ||| |||  ||||| || ||||   ||  |||||||||| ||||||||| ||| |||||||||||    
T  10693 atgtcatataattgtatatacattacatgaattatgttcgatgtttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactg 10594  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||||||||    
T  10593 cctatgttgttgtttgttatttaaaaaagctgcatgagtcggtctaagttg 10543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 101; Significance: 5e-50; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 34 - 297
Target Start/End: Complemental strand, 6877 - 6611
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||| ||| ||| ||| || |||||||||||| |||||||||  ||||  ||||||  |||    |||||  |||||||| |  ||    
T  6877 cgagttgatgtgagttgaacttggagattagaatctaagttgtttatcttgctgttgttgttttagtaagcttgaattatatgatctaatgttgttgtta 6778  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||||||||||||||||||||||| ||| |||||||  ||    || ||||   ||  |||||||||| ||||||||| ||| |||||||||||    
T  6777 atgttatataattgtatatacattacatgaattatgtttgatgtttataatgatgataacttgcattcgatattgttatatcatcatgatttgcatactg 6678  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  6677 cctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 6611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 34 - 297
Target Start/End: Complemental strand, 14257 - 13991
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||| ||| ||| ||| || |||||||||||| |||||||||  ||||  ||||||  |||    |||||  |||||||| |  ||    
T  14257 cgagttgatgtgagttgaacttggagattagaatctaagttgtttatcttgctgttgttgttttagtaagcttgaattatatgatctaatgttgttgtta 14158  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactg 230  Q
    |||||||||||||||||||||||||||||| ||| |||||||  ||    || ||||   ||  |||||||||| ||||||||| ||| |||||||||||    
T  14157 atgttatataattgtatatacattacatgaattatgtttgatgtttataatgatgataacttgcattcgatattgttatatcatcatgatttgcatactg 14058  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  14057 cctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 13991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 101; Significance: 5e-50; HSPs: 7)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 40 - 279
Target Start/End: Complemental strand, 62455 - 62216
Alignment:
Q  40 gatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttataatgtt 138  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||  |||| ||||||| |||| |  ||||||| ||||| || |  |||||||    
T  62455 gatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattgttatgaactaatgatgttgttaatgtt 62356  T
Q  139 atataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgtt 238  Q
    |||||||||||||||||||| |||| ||| ||| |||| ||||| || || | |  |||||||||||||||| ||| ||| ||| |||||||||||||||    
T  62355 atataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgtgcattcgatattattataccatgatgtttttcatactgcctatgtt 62257  T
Q  239 gttgtttgttattcaactaagctgcatgagtcggtctaagt 279  Q
    | |||||||| || ||||||||||||||||||||| |||||    
T  62256 gctgtttgttgtttaactaagctgcatgagtcggtttaagt 62216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 34 - 293
Target Start/End: Complemental strand, 132917 - 132662
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||  |||||||||||||||||||| |||||||| |||||| |||||    
T  132917 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttactgttgttgttccagtaagactgatgcatatgaattgatgttgtttata 132818  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatg-gtttgcatactg 230  Q
    ||||| ||      ||||||||||| |||  ||| | ||||||||||||  | ||||  ||| |||||||||| || |||||| |||  ||||||||||     
T  132817 atgttgta------tatatacattaaatggattatg-ttgataattgagacgttgatgattacattcgatattgttgtatcatgatgattttgcatacta 132725  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    | ||||||| ||||||||||| | |||||||||||||||||||||||| || ||| |||||||    
T  132724 cttatgttgctgtttgttatttatctaagctgcatgagtcggtctaagatgatgatgatgatg 132662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 136730 - 136680
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  136730 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 136680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 139199 - 139149
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  139199 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 139149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 144137 - 144087
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  144137 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 144087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 134261 - 134211
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| |||||||||||||||||||||||| |||| | ||||||||||    
T  134261 ttgttatttaactaagctgcatgagtcggtctatgttgattaagatgatga 134211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 141668 - 141618
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||| ||||||||||||||||||| | ||||||||||    
T  141668 ttgttatttaactaagctacatgagtcggtctaagttgattaagatgatga 141618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 34 - 278
Target Start/End: Original strand, 53403 - 53651
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| |||  |||| |||||||||||||||||||| |||||| || |||||| |||||    
T  53403 cgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatctttatgttgatgttccagtaagactgatgtttatgatttgatgttgtttata 53502  T
Q  134 atgttatataattgtatatacattacatgacttaagtttg-ataattga---gttgctgatttatattcgatattattatatcattatggtttgcatact 229  Q
    |||| ||||||||||||||||||||| ||| |||  | || ||| ||||   |||| ||| ||  ||| |||||| |||||||||  || ||||||||||    
T  53503 atgtgatataattgtatatacattacttgaattatatatgaatatttgagatgttgatgacttgcatttgatattgttatatcatgttgttttgcatact 53602  T
Q  230 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||| ||||||||  | ||||||||||||||| || |||||||    
T  53603 gcctatgttgctgtttgtttattaactaagctgcatgaatcagtctaag 53651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 36 - 281
Target Start/End: Complemental strand, 5906 - 5659
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttataa 134  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||| ||||  |||| ||||||| |||| |   |||||  |||||||| |  |||    
T  5906 agttgatgtgagttgatcttagaggttaaaaactaagtt-tttatcttgttgttgttgtttcagtaagcctgaattaatatgatctaatgttgttgttaa 5808  T
Q  135 tgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgc 231  Q
    || ||||||||||||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||| ||||||||    
T  5807 tggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgattttcatactgc 5709  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||||||    
T  5708 ctatgttgctgtttgttattttactaagctgcatgagtcggtctaagttg 5659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 36 - 293
Target Start/End: Original strand, 2502 - 2762
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttataa 134  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| ||||||| |  |||| ||||||| |||| |   |||||  |||||||| |  |||    
T  2502 agttgatgtgagttgatcttagaggttagaaattaagttgtttatcttgctgatgttgtttcagtaagcctgaattaatatgatctaatgttgttgttaa 2601  T
Q  135 tgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgc 231  Q
    || ||||||||||||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||| ||||| ||||| ||| ||| ||| ||||||||    
T  2602 tggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcaatattgttataacatgatgatttacatactgc 2700  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  2701 ctatgttgatgtttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 2762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 46 - 293
Target Start/End: Complemental strand, 32345 - 32102
Alignment:
Q  46 agttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataat 145  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||  |||||||||||||||||||| |||||||| |||||| |||||||||| ||        
T  32345 agttgatcttagaggttagaaactaagttgtttatcttactgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttgta---- 32250  T
Q  146 tgtatatacattacatgacttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatg-gtttgcatactgcctatgttgttg 242  Q
      ||||||||||| |||  ||| | ||||||||||||  | ||||  ||| |||||||||| ||||||||| |||  |||||||||| | ||||||||||    
T  32249 --tatatacattaaatggattatg-ttgataattgagacgttgatgattacattcgatattgttatatcatgatgattttgcatactacttatgttgttg 32153  T
Q  243 tttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    ||||||||| | |||||||||||||||||||||||| || ||| |||||||    
T  32152 tttgttatttatctaagctgcatgagtcggtctaagatgatgatgatgatg 32102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 36 - 297
Target Start/End: Original strand, 892 - 1155
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaat-taatgttgcttataa 134  Q
    ||||||||| |||||||||| || |||| |||||||||| |||| |||| ||||  |||| ||||||| ||||   || | ||| |||||||| |  |||    
T  892 agttgatgttagttgatcttggaagttagaaactaagttatttatcttgttgttgttgtttcagtaagcctgaa--ttgtaaatctaatgttgttgctaa 989  T
Q  135 tgttatataattgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatactgc 231  Q
    ||||||||||||||||||||||||||||| ||| |||||||  ||  || |||| ||| ||  ||||||| || ||||||||| ||| | |||||||| |    
T  990 tgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttgatgacttgcattcgatgttgttatatcatgatgatctgcatactac 1089  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||    
T  1090 ctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 1155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 34 - 297
Target Start/End: Complemental strand, 32801 - 32538
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| |||| ||||| |||| ||||||| ||||    ||| |  |||||||  |  ||    
T  32801 cgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgttgttattgtttcagtaagcctgaattatataatctaatgtttttgtta 32702  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgc 231  Q
    |||||||||| ||||||||||||||||||| ||| |||||||  ||||| || || |  ||  ||| |||||| |||||||||  || ||||||||||||    
T  32701 atgttatatagttgtatatacattacatgaattatgtttgatgtttgagatgttgttgattgcatttgatattgttatatcatgttgttttgcatactgc 32602  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| ||||||||  | |||||||||||||||||||||||||||||   |||||||||||||    
T  32601 ctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagttg--aaagatgatgatgt 32538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 36 - 293
Target Start/End: Original strand, 14554 - 14814
Alignment:
Q  36 agttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgct-tatgaattaatgttgcttataa 134  Q
    |||||||||||||||||||||||||||| |||||||||||| || |||||||||  |||| ||||||| |||||    |||||  |||||||  |  |||    
T  14554 agttgatgtgagttgatcttagaggttagaaactaagttgtatatcttgctgttgttgtttcagtaagcctgatttaatatgatctaatgtttttgttaa 14653  T
Q  135 tgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgc 231  Q
    || |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  ||||||||||| |||||||| ||| ||| | ||||||    
T  14654 tggtatataatagtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattactatatcatgatgattttcttactgc 14752  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||| ||||||||| | ||||||||||||||||||||||||||||| ||| |||||||    
T  14753 ctatgttgctgtttgttagttaactaagctgcatgagtcggtctaagttgatgatgatgatg 14814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 34 - 297
Target Start/End: Complemental strand, 13205 - 12942
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||| | ||| ||| |||||||||| |||| |||||||||  |||| ||||||| ||||     || |  |||||||| |  ||    
T  13205 cgagttgatgtgagttgatcatggagattagaaactaagttatttatcttgctgttgttgtttcagtaagcctgaattggataatctaatgttgttgcta 13106  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatactg 230  Q
    ||||||||||||||||||||||||||| || ||| |||||||  ||  || |||| ||| ||  |||||||||| |||||||||  || |||||||||||    
T  13105 atgttatataattgtatatacattacacgaattatgtttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgctgatttgcatactg 13006  T
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||||   |||||||||||||||||    
T  13005 cctatgttgttgtttgttatttaactgagcagcatgagtcggtctaa---gttgaagatgatgatgt 12942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 34 - 143
Target Start/End: Original strand, 28666 - 28775
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||| | |||||||||||||||||||| |||||||| |||||| |||||    
T  28666 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgtcattgttccagtaagactgatgcatatgaattgatgttgtttata 28765  T
Q  134 atgttatata 143  Q
    ||||||||||    
T  28766 atgttatata 28775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 28813 - 28887
Alignment:
Q  220 tttgcatactgcctatgttgttgtt-tgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||||||||||||||| |||  |||| || ||||||||||||||||||||||||||||| ||| |||||||    
T  28813 tttgcatactgcctatgttgctgtaatgttgtttaactaagctgcatgagtcggtctaagttgatgatgatgatg 28887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 79; Significance: 6e-37; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 15796 - 15898
Alignment:
Q  195 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  15796 attcgatattgttatatcatcatgatttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 15895  T
Q  295 tgt 297  Q
    |||    
T  15896 tgt 15898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 15687 - 15761
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga 108  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||| |||||||||  |||| ||||||| ||||    
T  15687 cgagttgatgtgagttgatcttggagattagaaactaagttgtttatcttgctgttgttgtttcagtaagcctga 15761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 178947 - 178898
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||| ||| ||||||||||||||||||||||| | | |||||||||    
T  178947 ttgttatttaaccaagctgcatgagtcggtctaagtcgatcaagatgatg 178898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 34 - 278
Target Start/End: Complemental strand, 12834 - 12587
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    ||||| |||||||||||||||||||||| | ||||||||||||||| |||||||||  |||| ||||||| || |||  ||| | || |||||| |||||    
T  12834 cgagtggatgtgagttgatcttagaggtaataaactaagttgtttatcttgctgttgttgtttcagtaagtctaatgtgtattatttgatgttgtttata 12735  T
Q  134 atgttatataattgtatatacattacatgacttaagtttga-taattga---gttgctgatttatattcgatattattatatcattatggtttgcatact 229  Q
    |||| ||||||||||||||||||||| ||| |||  | | | || ||||   |||| ||| ||  ||| |||||| |||||||||  || ||||||||||    
T  12734 atgtgatataattgtatatacattac-tgaattatatataagtatttgagatgttgatgacttgcatttgatattgttatatcatgctgttttgcatact 12636  T
Q  230 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||| ||||||||  | ||||||||| ||||||||||||||||    
T  12635 gcctatgttgctgtttgtttattaactaagctacatgagtcggtctaag 12587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 34 - 293
Target Start/End: Original strand, 2659 - 2923
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgct-tatgaattaatgttgcttat 132  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||  |||| ||||||| |||||    |||||  || ||||| |  |    
T  2659 cgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgatttaatatgatctattgttgttgtt 2758  T
Q  133 aatgttatataattgtatata----cattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgca 225  Q
    |||| ||||  ||||||||||    ||||  |||| ||||| | |||| |||||   ||| ||||||  ||| |||||| ||||||||| ||| ||||||    
T  2759 aatggtata--attgtatatatatacattttatgaattaagct-gatatttgagatgttgttgatttgcatttgatattgttatatcatgatgatttgca 2855  T
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||||||| | ||||||||||| |||||||||||||||||||||||||| || ||| |||||||    
T  2856 tactgcctatgtagctgtttgttatttaactaagctgcatgagtcggtctaagatgatgatgatgatg 2923  T

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Target: scaffold0507 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 38 - 276
Target Start/End: Original strand, 7917 - 8161
Alignment:
Q  38 ttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgt 137  Q
    ||||||||||||||||||||||||   ||||||||||||||| ||||||| |  ||||||||| |||||||||  ||||| || |||||| |||||||||    
T  7917 ttgatgtgagttgatcttagaggtatgaaactaagttgtttatcttgctgatgttgttccagtgagactgatgtatatgatttgatgttgtttataatgt 8016  T
Q  138 tatataattgtatatacattacatgacttaagtttgataattga----gttgctgatttatattcgatattattatatcatta--tggtttgcatactgc 231  Q
     |||||||| |||||||||||| ||| |||  | |||   || |    |||| ||| ||  ||| |||||||||||||||| |  || ||||||||||||    
T  8017 gatataattttatatacattacttgaattatatatgaatgtttaagatgttgttgaatttcatttgatattattatatcatgagctgatttgcatactgc 8116  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 276  Q
    ||||| || | ||||||||| || ||||||||||| |||||||||    
T  8117 ctatgctgctatttgttatttaattaagctgcatgcgtcggtcta 8161  T

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Target: scaffold1257 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 241
Target Start/End: Original strand, 2073 - 2283
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttat 132  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||  |||| ||||||| |||| |   |||||   ||||||| |  |    
T  2073 cgagttgatgtgagttgatcttagaggttagaaaataagttgtttatcttgctgttgttgtttcagtaagcctgatttaatatgatccaatgttgttgtt 2172  T
Q  133 aatgttatataattgtatatacattacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatact 229  Q
    |||| ||||||||||||||||||||| |||| ||| |  ||||| ||||   |||| ||||||  ||| |||||| ||||||||| ||| ||||||||||    
T  2173 aatggtatataattgtatatacattatatgaattatg-ctgatatttgagatgttgttgatttgcatttgatattgttatatcatgatgatttgcatact 2271  T
Q  230 gcctatgttgtt 241  Q
    ||||||||||||    
T  2272 gcctatgttgtt 2283  T

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Target: scaffold0106 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 7338 - 7266
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  7338 atactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 7266  T

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Target: scaffold0106; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 227 - 297
Target Start/End: Complemental strand, 1359 - 1289
Alignment:
Q  227 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  1359 actgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 1289  T

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Target: scaffold0106; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 15306 - 15356
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| |||||||||||||||||||||||| |||| | ||||||||||    
T  15306 ttgttatttaactaagctgcatgagtcggtctacgttgattaagatgatga 15356  T

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Target: scaffold0100 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 23902 - 24001
Alignment:
Q  195 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||   ||||||||||||||    
T  23902 attcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctacatgagtcggtctaa---gttgaagatgatga 23998  T

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Target: scaffold0021 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 278
Target Start/End: Original strand, 136222 - 136471
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatga-attaatgttgcttat 132  Q
    |||||||||||||||||||||| |||||   ||||||||||||||| |||||||||  |||| ||||||| ||||    |||||  ||||||||| |  |    
T  136222 cgagttgatgtgagttgatcttggaggtaggaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattatatgattttaatgttgttgtt 136321  T
Q  133 aatgttatataattgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcatac 228  Q
    ||||||||||| ||||||||||||||||||| ||| ||  ||| || ||| |||| ||||||  ||| |||||| ||||||||| |  || ||||  |||    
T  136322 aatgttatatagttgtatatacattacatgaattatgtacgatgatgtgatgttgttgatttgcatttgatattgttatatcatgaactgttttgtgtac 136421  T
Q  229 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||||| | ||||||||  | ||||||| ||||||||||||||||||    
T  136422 tgcctatgtcgctgtttgtttattaactaagttgcatgagtcggtctaag 136471  T

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Target: scaffold0021; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 278
Target Start/End: Original strand, 144930 - 145179
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatga-attaatgttgcttat 132  Q
    |||||||||||||||||||||| |||||   ||||||||||||||| |||||||||  |||| ||||||| ||||    |||||  ||||||||| |  |    
T  144930 cgagttgatgtgagttgatcttggaggtaggaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattatatgattttaatgttgttgtt 145029  T
Q  133 aatgttatataattgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcatac 228  Q
    ||||||||||| ||||||||||||||||||| ||| ||  ||| || ||| |||| ||||||  ||| |||||| ||||||||| |  || ||||  |||    
T  145030 aatgttatatagttgtatatacattacatgaattatgtacgatgatgtgatgttgttgatttgcatttgatattgttatatcatgaactgttttgtgtac 145129  T
Q  229 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||||| | ||||||||  | ||||||| ||||||||||||||||||    
T  145130 tgcctatgtcgctgtttgtttattaactaagttgcatgagtcggtctaag 145179  T

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Target: scaffold0021; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 225 - 296
Target Start/End: Complemental strand, 174838 - 174767
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatg 296  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||    
T  174838 atactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagatgttgaagttgatgatg 174767  T

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Target: scaffold0021; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 227 - 297
Target Start/End: Complemental strand, 121835 - 121766
Alignment:
Q  227 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  121835 actgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 121766  T

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Target: scaffold1842 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 1093 - 1169
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1093 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 1169  T

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Target: scaffold0358 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 4788 - 4712
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4788 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 4712  T

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Target: scaffold0011 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 168023 - 168099
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  168023 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 168099  T

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Target: scaffold0011; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 51989 - 51913
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||| ||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  51989 tttgtatattgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 51913  T

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Target: scaffold0461 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 198 - 297
Target Start/End: Complemental strand, 11563 - 11464
Alignment:
Q  198 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||| ||| |||||||||||||||||||| || |||||| | ||||||||||||||||||  ||||||| |||||||||| ||||||    
T  11563 cgatattattatatcatgatgttttgcatactgcctatgttgctgattgttaattaactaagctgcatgagtcaatctaagtcgttgaagatgttgatgt 11464  T

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Target: scaffold0124 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 38278 - 38377
Alignment:
Q  198 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||| ||| |||||||||||||||||||| || |||||| | ||||||||||||||||||  ||||||| |||||||||| ||||||    
T  38278 cgatattattatatcatgatgttttgcatactgcctatgttgctgattgttaattaactaagctgcatgagtcaatctaagtcgttgaagatgttgatgt 38377  T

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Target: scaffold0540 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 199 - 297
Target Start/End: Original strand, 3174 - 3271
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||  || |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  3174 gatattattatgtcatgttgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 3271  T

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Target: scaffold0064 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 227 - 297
Target Start/End: Complemental strand, 47065 - 46995
Alignment:
Q  227 actgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||    
T  47065 actgcctatgttgttgtttgttatttaactaagctacatgagtcggtctaagatgttgaagatgatgatgt 46995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 58; Significance: 2e-24; HSPs: 4)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 16189 - 16113
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  16189 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 16113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 199 - 297
Target Start/End: Original strand, 32980 - 33077
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||  || |||| ||||||||| ||||| |||| |||| | ||||||||||||||||||||||||||||| |||||||||||||||    
T  32980 gatattattatgtcatgctgttttgtatactgcctgtgttgctgtt-gttaattaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 33077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 199 - 297
Target Start/End: Complemental strand, 46025 - 45928
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||  || |||| ||||||||| ||||| |||| |||| | ||||||||||||||||||||||||||||| |||||||||||||||    
T  46025 gatattattatgtcatgctgttttgtatactgcctgtgttgctgtt-gttaattaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 45928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 17397 - 17450
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||||||||||    
T  17397 ttgttatttaactaagctacatgagtcggtctaagttgatgaagatgatgatgt 17450  T

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Target: scaffold2014 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold2014
Description:

Target: scaffold2014; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 1135 - 1051
Alignment:
Q  194 tattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||| |||||| |||||||||  || |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  1135 tatttgatattgttatatcatgctgttttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaag 1051  T

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Target: scaffold0456 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 10472 - 10544
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||    
T  10472 atactgcctatgttgctgtttgttaattaactatgctgcatgagtcggtctaagttgttgaagatgatgatgt 10544  T

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Target: scaffold0351 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 16354 - 16282
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  16354 atactgcctatgttgctgtttcttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 16282  T

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Target: scaffold0141 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 39574 - 39479
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgat 295  Q
    ||||||||||| ||||  || |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||| ||||||    
T  39574 gatattattatgtcatgctgttttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagacgatgat 39479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 199 - 295
Target Start/End: Original strand, 75238 - 75333
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgat 295  Q
    ||||||||||| ||||  || |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||| ||||||    
T  75238 gatattattatgtcatgctgttttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagacgatgat 75333  T

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Target: scaffold0032 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 51654 - 51582
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||    
T  51654 atactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtctaagatgttgaaaatgatgatgt 51582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 182 - 296
Target Start/End: Original strand, 3192 - 3306
Alignment:
Q  182 gttgctgatttatattcgatattattatatcattatggttt-gcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagtt 280  Q
    |||| ||| ||| ||| ||||||||||||||||  || ||| | ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||    
T  3192 gttgttgaattacatttgatattattatatcatgctgtttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagtt 3290  T
Q  281 gttgaagatgatgatg 296  Q
    | ||||||||||||||    
T  3291 gatgaagatgatgatg 3306  T

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Target: scaffold0357 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 182 - 281
Target Start/End: Original strand, 16106 - 16205
Alignment:
Q  182 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||| ||||||| ||| |||||| |||||||||  || |||||||||| ||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  16106 gttgttgatttacatttgatattgttatatcatgttgttttgcatactacctatgttgttgtttgtttattaactaagctgcatgagtcggtctaagttg 16205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 13243 - 13147
Alignment:
Q  182 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||| ||||||  ||| |||||| |||||||||  || |||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||    
T  13243 gttgttgatttgcatttgatattgttatatcatgctgttttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggtctaag 13147  T

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Target: scaffold0357; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 2732 - 2680
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||||||||||||| |||||  | ||||||||||||||||||||||||||    
T  2732 tactgcctatgttgttgcttgtttattaactaagctgcatgagtcggtctaag 2680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 182 - 281
Target Start/End: Original strand, 27755 - 27854
Alignment:
Q  182 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||| ||||||| ||| |||||| |||||||||  || |||||||||| ||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  27755 gttgttgatttacatttgatattgttatatcatgctgttttgcatactacctatgttgttgtttgtttattaactaagctgcatgagtcggtctaagttg 27854  T

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Target: scaffold0113 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 226 - 297
Target Start/End: Complemental strand, 32137 - 32067
Alignment:
Q  226 tactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32137 tactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 32067  T

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Target: scaffold0427 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 199 - 297
Target Start/End: Complemental strand, 13594 - 13497
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| || ||||  || |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  13594 gatattatcatgtcatgttgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgttgaagttgatgatgt 13497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 199 - 297
Target Start/End: Original strand, 15487 - 15584
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||  || |||| ||||||||||||||| | || |||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  15487 gatattattatgtcatgttgttttgtatactgcctatgttgctctt-gttatttaactaagctgcatgagtcagtctaagttgttgaagatgatgatgt 15584  T

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Target: scaffold1137 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 143
Target Start/End: Original strand, 2158 - 2267
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    ||||| |||||||||| ||||||||||||| ||||||||||||||| ||| ||| |  | | |||||||||||||||| |||||||| |||||| |||||    
T  2158 cgagtggatgtgagttaatcttagaggttagaaactaagttgtttatcttactgatcttatcccagtaagactgatgcatatgaattgatgttgtttata 2257  T
Q  134 atgttatata 143  Q
    ||||| ||||    
T  2258 atgttgtata 2267  T

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Target: scaffold0403 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 4925 - 4849
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  4925 tttgtatactgcctatgttgctgtt-gttatttaactaatctgcatgagtcggtctaagttgttgaagatgatgatgt 4849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 18047 - 18148
Alignment:
Q  196 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgat 295  Q
    ||||||||||||||||||| ||| | |||||| ||| ||||||| || |||||| | |||||||||||||||||| |||||||| |||||||||| ||||    
T  18047 ttcgatattattatatcatgatgttgtgcataatgcatatgttgctgattgttaattaactaagctgcatgagtcagtctaagtcgttgaagatgttgat 18146  T
Q  296 gt 297  Q
    ||    
T  18147 gt 18148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 2241 - 2291
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| |||||||||||| |||||||||||||||| | || |||||||    
T  2241 ttgttatttaactaagctgcaagagtcggtctaagttgattaaaatgatga 2291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 6166 - 6245
Alignment:
Q  220 tttgcatactgcctatgttgttgtt--tgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||| ||||||||||||||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  6166 tttgtatactacctatgttgttgttgttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 6245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 1098 - 1170
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||||||| ||||| ||| | |||||||||||||||||||||||||| ||||||||||||||||||    
T  1098 atactgcctatgttgatgtttattaattaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 1170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 220 - 296
Target Start/End: Original strand, 17262 - 17337
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatg 296  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  17262 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatg 17337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 278
Target Start/End: Original strand, 79396 - 79430
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||| ||||||||||||||||||||||||||    
T  79396 ttgttatttaactaagctgcatgagtcggtctaag 79430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 199 - 294
Target Start/End: Original strand, 339972 - 340065
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    ||||||||||| ||||  || |||| |||||||||||||||||||  |||||| |||||||||||||||||||||||||||||  |||||||||||    
T  339972 gatattattatgtcatgttgttttgtatactgcctatgttgttgt--gttatttaactaagctgcatgagtcggtctaagttgacgaagatgatga 340065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 158562 - 158612
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  158562 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 158612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 231 - 294
Target Start/End: Original strand, 5183 - 5246
Alignment:
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  5183 cctatgttgatgtttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatga 5246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 199 - 294
Target Start/End: Original strand, 38725 - 38820
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||| |||||||||  || ||||||||||| |||||||| ||||||||||| ||||||| ||||||||| ||||||||||| | ||||||||||    
T  38725 gatattgttatatcatgttgttttgcatactgtctatgttgctgtttgttatttaactaaggtgcatgagtaggtctaagttgattaagatgatga 38820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 34 - 281
Target Start/End: Original strand, 103493 - 103736
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||||| |||||   |||||||||| |||| ||| |||||  |||| ||||||| ||||    ||||| ||||||||| |  ||    
T  103493 cgagttgatgtgagttgatcttggaggtaggaaactaagttctttatcttcctgttgttgtttcagtaagcctgaattatatgatttaatgttgttgtta 103592  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcatta--tggtttgcatactgc 231  Q
    ||||||| || ||||||||||||||||||| ||| || ||||      |||| || |||  ||| |||||| ||||||||| |  || |||  ||||| |    
T  103593 atgttatgtagttgtatatacattacatgaattatgtatgat------gttgttgttttgcatttgatattgttatatcatgaattgttttttatactac 103686  T
Q  232 ctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    |||||||| ||||| ||  | ||||||||||||| |||||||||||||||    
T  103687 ctatgttgctgtttatttattaactaagctgcattagtcggtctaagttg 103736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 297
Target Start/End: Original strand, 11488 - 11564
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||| |||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| |||||    
T  11488 tttgtatactacctatgttgttgtt-gttatttaactaagctgcatgagtcggtttaagttgttgaagatgaagatgt 11564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 13287 - 13211
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| |||| |||||| |||||||||||||||||| |||||||||| |||||||||||||||    
T  13287 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcagtctaagttgatgaagatgatgatgt 13211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 1927 - 1851
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| |||||| |||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  1927 tttgtatactgtctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 1851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 207470 - 207522
Alignment:
Q  129 ttataatgttatataattgtatatacattacatgacttaagtttgataattga 181  Q
    |||||||||||||||||| |||||| ||| ||||| ||| ||||||| |||||    
T  207470 ttataatgttatataattatatatatattgcatgaattatgtttgatgattga 207522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 47; Significance: 8e-18; HSPs: 3)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 297
Target Start/End: Complemental strand, 33039 - 32942
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||  || |||| ||||||||||||||| | || |||||| || |||||||||||||||||||||| ||| |||||||||||||||    
T  33039 gatattattatgtcatgctgttttgtatactgcctatgttgctatt-gttatttaattaagctgcatgagtcggtctaacttgatgaagatgatgatgt 32942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 297
Target Start/End: Complemental strand, 38858 - 38761
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||  || |||| ||||||||||||||| | || |||||| || |||||||||||| ||||||||||||| |||||||||||||||    
T  38858 gatattattatgtcatgctgttttgtatactgcctatgttgctatt-gttatttaattaagctgcatgactcggtctaagttgatgaagatgatgatgt 38761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 9799 - 9744
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgtcc 299  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||| ||||    
T  9799 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgaagtcc 9744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 220 - 290
Target Start/End: Original strand, 26110 - 26179
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatg 290  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||| ||||||||    
T  26110 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagttgatgaagatg 26179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 44752 - 44825
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||| ||||||||| ||||| |||| |||||| |||||||||||||||||| |||||||||| | ||||||||||    
T  44752 tttgtatactgcctgtgttgctgtt-gttatttaactaagctgcatgagtcagtctaagttgattaagatgatga 44825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 297
Target Start/End: Complemental strand, 40010 - 39913
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||  || |||| ||||||||||||||| | || |||||| || |||||||||||||| ||||||||||| |||||||||||||||    
T  40010 gatattattatgtcatgttgttttgtatactgcctatgttgctatt-gttatttaattaagctgcatgagttggtctaagttgatgaagatgatgatgt 39913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 278
Target Start/End: Original strand, 19742 - 19987
Alignment:
Q  37 gttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatg 136  Q
    |||||| |||||||||||| | ||| | ||||||||||| ||| ||| |||||  ||||||||||||  |||    ||||| || |||||  | ||||||    
T  19742 gttgatatgagttgatcttgggggtaagaaactaagttgcttatcttactgttgttgttccagtaagcatgaattatatgatttgatgttattaataatg 19841  T
Q  137 ttatataattgtatatacattacatgacttaagtttgataatt-ga-gttgctgatttatattcgatattattatatcatta--tggtttgcatactgcc 232  Q
    | |||||| ||||||| |||||||||| |||  | ||||  |  || |||| ||| ||  ||| |||||| ||||||||| |  || |||  ||||||||    
T  19842 tgatataaatgtatatgcattacatgagttatttatgatgctgagatgttgttgaattgcatttgatattgttatatcatgaactgttttatatactgcc 19941  T
Q  233 tatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||| ||||||||  | || |||||||||||||||||||||||    
T  19942 tatgttgctgtttgtttattaattaagctgcatgagtcggtctaag 19987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 297
Target Start/End: Complemental strand, 25993 - 25896
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| |||| ||  |||| ||||||||||||||| | || |||||| ||||||||| ||||||||||||||||||| ||||||| |||||||    
T  25993 gatattattatgtcatgatattttgtatactgcctatgttgctatt-gttatttaactaagcttcatgagtcggtctaagttgatgaagataatgatgt 25896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 297
Target Start/End: Complemental strand, 39955 - 39858
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| |||| ||  |||| ||||||||||||||| | || |||||| ||||||||| ||||||| ||||||||||| |||||||||||||||    
T  39955 gatattattatgtcatgatattttgtatactgcctatgttgctatt-gttatttaactaagcttcatgagttggtctaagttgatgaagatgatgatgt 39858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 2028 - 1952
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||| | |||| |||| | |||||||||||||||||||||||||| ||||||||||||||||||    
T  2028 tttgtatactgcctatgtcgctgtt-gttaattaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 1952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 419 - 343
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| |||||||||||||| ||||| |||||| ||||||||||||||||||||||||||| | | |||||||||||||    
T  419 tttgtatactgcctatgttattgtt-gttatttaactaagctgcatgagtcggtctaagtcgataaagatgatgatgt 343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 3546 - 3470
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||| ||||||||||||||| | || |||||| ||||||||| ||||||||||||||||||| |||||||||||||||    
T  3546 tttgtatactgcctatgttgct-ttagttatttaactaagctacatgagtcggtctaagttgatgaagatgatgatgt 3470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 297
Target Start/End: Original strand, 8556 - 8650
Alignment:
Q  199 gatattattatatcattatggtttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||||| ||||  || |||  |||||||||||||||     ||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  8556 gatattattatgtcatgctgtttttgatactgcctatgttg----ctgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 8650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 46; Significance: 3e-17; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 278
Target Start/End: Original strand, 128855 - 129072
Alignment:
Q  65 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 164  Q
    ||||||||||| ||| ||| |||||  |||| ||||||| |||||    |||| || |||||| | ||||||| ||||| |||||||| ||||||||||     
T  128855 aaactaagttgcttatcttactgttgttgtttcagtaagcctgatttagatgatttgatgttgttaataatgtgatatatttgtatatccattacatgaa 128954  T
Q  165 ttaagtttgataattgag---ttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgttattcaactaag 259  Q
    |||  | ||||  |||||   ||| ||||||  ||| |||||| ||||||||| |  || |||   |||||||||||||| ||||||||||| |||||||    
T  128955 ttatatatgatgtttgagatgttgttgatttgcatttgatattgttatatcatgaattgttttatgtactgcctatgttgctgtttgttatt-aactaag 129053  T
Q  260 ctgcatgagtcggtctaag 278  Q
    |||||||||||||||||||    
T  129054 ctgcatgagtcggtctaag 129072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 116480 - 116430
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  116480 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 116430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 78587 - 78459
Alignment:
Q  35 gagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataa 134  Q
    ||||||||||||||||||| | | ||| |  |||||||||| ||| ||| |||||  |||| ||||||| ||||    ||||| || |||||| | ||||    
T  78587 gagttgatgtgagttgatcatgggggtaagcaactaagttgcttatcttactgttgttgtttcagtaagcctgaattatatgatttgatgttgttaataa 78488  T
Q  135 tgttatataattgtatatacattacatga 163  Q
    ||| |||||| ||||||| ||||||||||    
T  78487 tgtgatataaatgtatatgcattacatga 78459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 274
Target Start/End: Complemental strand, 78391 - 78345
Alignment:
Q  228 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 274  Q
    |||||||||||| ||||||||  | ||||||||||||||||||||||    
T  78391 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtc 78345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 8532 - 8479
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  8532 ttgttatttaaccaagctgcatgagtcggtctaagttgatgaagatgatgatgt 8479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 16668 - 16721
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||    
T  16668 ttgttatttaactaagctgcatgagtcggtctaaattgatgaagatgatgatgt 16721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 220 - 297
Target Start/End: Complemental strand, 20987 - 20910
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| ||||||||||| || |||||| | |||||||||  |||||||||||||||| |||||||||| ||||||    
T  20987 tttgcatattgcctatgttgctgattgttaattaactaagctttatgagtcggtctaagtcgttgaagatgttgatgt 20910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 25178 - 25122
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttg 281  Q
    ||||||||||||||| ||||||||  | |||||||||||||||||||||||||||||    
T  25178 atactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaagttg 25122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 4888 - 4954
Alignment:
Q  230 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||||| |||| |||||| ||||||| ||||||||| ||||||||||| |||||||||||||||    
T  4888 gcctatgttgctgtt-gttatttaactaagttgcatgagttggtctaagttgatgaagatgatgatgt 4954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 279
Target Start/End: Original strand, 24348 - 24406
Alignment:
Q  220 tttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaagt 279  Q
    |||| ||||||||||||||| |||| |||||| |||||||||||||||||||||||||||    
T  24348 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtctaagt 24406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 13442 - 13392
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  13442 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 13392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 20797 - 20747
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  20797 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 20747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 22936 - 22886
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  22936 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 22886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 16834 - 16784
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  16834 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 16784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 37871 - 37821
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  37871 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 37821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 278
Target Start/End: Original strand, 6137 - 6386
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||| ||||| | | ||| | ||||||||||| ||| ||  |||||  |||| ||||||| ||||    ||||| || |||||| |  ||    
T  6137 cgagttgatgtgagatgatcatgggggtaagaaactaagttgcttatctcactgttgttgtttcagtaagcctgaattatatgatttgatgttgttatta 6236  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcatta--tggtttgcatac 228  Q
    |||| |||||| ||||||| |||||||||| |||  | ||||  |||||   ||| ||||||  ||| |||||| | ||||||| |  || |||  ||||    
T  6237 atgtgatataaatgtatatgcattacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgtcatatcatgagctgttttatatac 6336  T
Q  229 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||||||| ||||||||  | ||||||| ||||||||||||||||||    
T  6337 tgcctatgttgctgtttgttcattaactaagttgcatgagtcggtctaag 6386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 278
Target Start/End: Original strand, 13793 - 13840
Alignment:
Q  231 cctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||||||||||||||  | ||||||||||||||||||||||||||    
T  13793 cctatgttgttgtttgttcattaactaagctgcatgagtcggtctaag 13840  T

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Target: scaffold0006 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 278
Target Start/End: Complemental strand, 97272 - 97024
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||| | | ||| | ||||||||||| ||  ||| |||||  |||| ||||||| |||||    |||| || |||||| | |||    
T  97272 cgagttgatgtgagttgatcat-ggggtaagaaactaagttgcttttcttactgttgttgtttcagtaagcctgatatagatgatttgatgttgttaata 97174  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcatta--tggtttgcatac 228  Q
    |||| ||||| |||||||| |||||||||| |||  | ||||  ||||   |||| ||||||  ||| |||||| ||||||||| |  || |||   |||    
T  97173 atgtgatatatttgtatatgcattacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgttatatcatgaactgttttatgtac 97074  T
Q  229 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||||||| ||||| ||  | ||||||||||||||||| ||||||||    
T  97073 tgcctatgttgctgtttatttattaactaagctgcatgagtgggtctaag 97024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 278
Target Start/End: Complemental strand, 106550 - 106302
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttata 133  Q
    |||||||||||||||||||| | | ||| | ||||||||||| ||  ||| |||||  |||| ||||||| |||||    |||| || |||||| | |||    
T  106550 cgagttgatgtgagttgatcat-ggggtaagaaactaagttgcttttcttactgttgttgtttcagtaagcctgatatagatgatttgatgttgttaata 106452  T
Q  134 atgttatataattgtatatacattacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcatta--tggtttgcatac 228  Q
    |||| ||||| |||||||| |||||||||| |||  | ||||  ||||   |||| ||||||  ||| |||||| ||||||||| |  || |||   |||    
T  106451 atgtgatatatttgtatatgcattacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgttatatcatgaactgttttatgtac 106352  T
Q  229 tgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||||||| ||||| ||  | ||||||||||||||||| ||||||||    
T  106351 tgcctatgttgctgtttatttattaactaagctgcatgagtgggtctaag 106302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 291
Target Start/End: Complemental strand, 4347 - 4300
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatga 291  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||    
T  4347 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatga 4300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 10823 - 10772
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgat 295  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||| ||||    
T  10823 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgttgat 10772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 9292 - 9241
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgat 295  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||| ||||    
T  9292 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgttgat 9241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 4599 - 4545
Alignment:
Q  221 ttgcatactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtcta 276  Q
    |||||||||||||||| ||||||| |||||| ||||||| ||||||||||||||||    
T  4599 ttgcatactgcctatgctgttgtt-gttatttaactaagttgcatgagtcggtcta 4545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 156 - 106
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||| ||||||||||||||| | ||||||||||    
T  156 ttgttatttaactaagctgcataagtcggtctaagttgattaagatgatga 106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 619 - 569
Alignment:
Q  228 ctgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||||||| ||||||||  | ||||||||||||||||||||||||||    
T  619 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggtctaag 569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 4744 - 4694
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| ||||||||||||||||||||||||||||| | | ||||||||    
T  4744 ttgttatttaactaagctgcatgagtcggtctaagttgattaggatgatga 4694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 9341 - 9275
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgctgttaatgttccagt 100  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||  || | ||||||| ||||||||||    
T  9341 cgagttgttgtgagttgatcttagatgttaagaactaagttgcctagcatgctgttgatgttccagt 9275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 9180 - 9136
Alignment:
Q  195 attcgatattattatatcattatggtttgcatactgcctatgttg 239  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||    
T  9180 attcgatattgttatatcatgatgagttgcatactgcctatgttg 9136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 13997 - 13947
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| | ||||||||||||||||||||||||||| | ||||||||||    
T  13997 ttgttatttatctaagctgcatgagtcggtctaagttgattaagatgatga 13947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 40450 - 40400
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||||| |||||||||||| |||||||||||||||| | ||||||||||    
T  40450 ttgttatttaactaagctgcacgagtcggtctaagttgattaagatgatga 40400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 294
Target Start/End: Original strand, 161206 - 161252
Alignment:
Q  248 tattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||| ||||||||||||||||||||||||||||| | ||||||||||    
T  161206 tatttaactaagctgcatgagtcggtctaagttggttaagatgatga 161252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 253 - 294
Target Start/End: Complemental strand, 12105 - 12064
Alignment:
Q  253 aactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    ||||||||||||||||||||||||||||| | ||||||||||    
T  12105 aactaagctgcatgagtcggtctaagttgattaagatgatga 12064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 23892 - 23843
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||| ||| ||||||||||||||||||||||||| | |||||||||    
T  23892 ttgttatttaaccaagctgcatgagtcggtctaagttgatcaagatgatg 23843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 274
Target Start/End: Complemental strand, 38388 - 38339
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 274  Q
    ||||||||||||||| ||||||||  | ||||||||||||||||||||||    
T  38388 atactgcctatgttgctgtttgttcattaactaagctgcatgagtcggtc 38339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 36503 - 36454
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatg 293  Q
    |||||||| ||| ||||||||||||||||||||||||| | |||||||||    
T  36503 ttgttatttaaccaagctgcatgagtcggtctaagttgatcaagatgatg 36454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 4262 - 4214
Alignment:
Q  246 gttattcaactaagctgcatgagtcggtctaagttgttgaagatgatga 294  Q
    |||||| ||||||| ||||||||||||||||||||| | ||||||||||    
T  4262 gttatttaactaagttgcatgagtcggtctaagttgattaagatgatga 4214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 12361 - 12413
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatg 296  Q
    |||||||| ||||||||||||| ||||||||||||||| | |||||| |||||    
T  12361 ttgttatttaactaagctgcataagtcggtctaagttgattaagatgttgatg 12413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 29982 - 29946
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagtt 280  Q
    |||||||| ||||||||||||||||||||||||||||    
T  29982 ttgttatttaactaagctgcatgagtcggtctaagtt 29946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 291
Target Start/End: Original strand, 1393 - 1440
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatga 291  Q
    |||||||| ||| ||||||||||||||||||||||||| | |||||||    
T  1393 ttgttatttaaccaagctgcatgagtcggtctaagttgattaagatga 1440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 278
Target Start/End: Complemental strand, 12016 - 11982
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||| ||||||||||||||||||||||||||    
T  12016 ttgttatttaactaagctgcatgagtcggtctaag 11982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 278
Target Start/End: Complemental strand, 2747 - 2694
Alignment:
Q  225 atactgcctatgttgttgtttgt-tattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||||||||||| ||||||| |||| | ||||||||||||||||||||||||    
T  2747 atactgcctatgttgctgtttgtctattga-ctaagctgcatgagtcggtctaag 2694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 278
Target Start/End: Original strand, 20490 - 20524
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaag 278  Q
    |||||||| ||||||||||||||||||||||||||    
T  20490 ttgttatttaactaagctgcatgagtcggtctaag 20524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 128805 - 128751
Alignment:
Q  243 tttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    ||||||||| ||||||| ||||||||| ||||||| ||| | |||||||||||||    
T  128805 tttgttatttaactaagttgcatgagttggtctaatttgattaagatgatgatgt 128751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 30; Significance: 0.0000001; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 4560 - 4508
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| |||||||| |||||||||||||||||||| |||| ||||| ||||    
T  4560 ttgttatttaactaagc-gcatgagtcggtctaagttgatgaaaatgattatgt 4508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 12142 - 12090
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| |||||||| |||||||||||||||||||| |||| ||||| ||||    
T  12142 ttgttatttaactaagc-gcatgagtcggtctaagttgatgaaaatgattatgt 12090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 22094 - 22042
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 297  Q
    |||||||| |||||||| |||||||||||||||||||| |||| ||||| ||||    
T  22094 ttgttatttaactaagc-gcatgagtcggtctaagttgatgaaaatgattatgt 22042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 278
Target Start/End: Complemental strand, 267732 - 267679
Alignment:
Q  225 atactgcctatgttgttgtttgttattcaactaagctgcatgagtcggtctaag 278  Q
    ||||||| ||||||| ||||||||  | ||||||| ||||||||||||||||||    
T  267732 atactgcatatgttgatgtttgtttattaactaagttgcatgagtcggtctaag 267679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 161
Target Start/End: Original strand, 1652 - 1779
Alignment:
Q  34 cgagttgatgtgagttgatcttagaggttaa-aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttat 132  Q
    |||||||||||||||||||||| |||| ||| |||||||||||  || ||| || ||  |||||||||||| ||||    ||||| || | |||| | ||    
T  1652 cgagttgatgtgagttgatctt-gagggtaagaaactaagttgcctatcttactattgttgttccagtaagcctgaattatatgatttgacgttgttaat 1750  T
Q  133 aatgttatataattgtatatacattacat 161  Q
    ||||| |||||| ||||||| ||||||||    
T  1751 aatgtgatataaatgtatatgcattacat 1779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 11338 - 11286
Alignment:
Q  244 ttgttattcaactaagctgcatgagtcggtctaagttgttgaagatgatgatg 296  Q
    |||||||| ||||||| ||||||||||||||||| ||| | |||||| |||||    
T  11338 ttgttatttaactaagttgcatgagtcggtctaatttgattaagatgttgatg 11286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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