View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0169_low_20 (Length: 288)

Name: NF0169_low_20
Description: NF0169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0169_low_20
NF0169_low_20
[»] scaffold0007 (1 HSPs)
scaffold0007 (14-269)||(143098-143344)
[»] scaffold0217 (3 HSPs)
scaffold0217 (12-265)||(19030-19283)
scaffold0217 (12-265)||(9559-9809)
scaffold0217 (12-265)||(21992-22243)
[»] chr8 (63 HSPs)
chr8 (12-263)||(21932874-21933125)
chr8 (12-265)||(12757670-12757923)
chr8 (12-269)||(19156187-19156444)
chr8 (12-244)||(16207297-16207529)
chr8 (12-265)||(23185135-23185386)
chr8 (12-250)||(19943226-19943466)
chr8 (12-250)||(39693526-39693764)
chr8 (12-265)||(602627-602880)
chr8 (12-250)||(18121031-18121266)
chr8 (12-237)||(16681238-16681463)
chr8 (12-244)||(17441736-17441967)
chr8 (12-265)||(17797413-17797664)
chr8 (12-209)||(16188975-16189172)
chr8 (36-237)||(33082872-33083073)
chr8 (12-265)||(24646329-24646581)
chr8 (26-250)||(17914464-17914688)
chr8 (12-237)||(17525663-17525889)
chr8 (12-195)||(30421405-30421589)
chr8 (12-265)||(18679806-18680057)
chr8 (27-217)||(23263566-23263757)
chr8 (12-243)||(29693306-29693537)
chr8 (14-265)||(15335997-15336246)
chr8 (14-265)||(15425062-15425311)
chr8 (14-265)||(15516366-15516615)
chr8 (12-238)||(18321093-18321319)
chr8 (12-265)||(24551265-24551516)
chr8 (12-265)||(36105186-36105437)
chr8 (12-244)||(17701736-17701968)
chr8 (12-237)||(18718992-18719217)
chr8 (12-265)||(1237628-1237879)
chr8 (12-237)||(17267465-17267689)
chr8 (12-237)||(20382329-20382554)
chr8 (86-213)||(20255524-20255651)
chr8 (12-265)||(40845297-40845547)
chr8 (12-265)||(45538348-45538599)
chr8 (130-250)||(22745596-22745716)
chr8 (12-265)||(22673769-22674020)
chr8 (26-265)||(9320573-9320812)
chr8 (12-265)||(22663107-22663358)
chr8 (26-156)||(18722661-18722792)
chr8 (26-156)||(18731006-18731137)
chr8 (26-156)||(18685412-18685543)
chr8 (12-197)||(43644887-43645071)
chr8 (12-265)||(6407717-6407958)
chr8 (12-265)||(14989369-14989611)
chr8 (12-154)||(19707497-19707639)
chr8 (26-265)||(24832965-24833203)
chr8 (26-128)||(45567945-45568047)
chr8 (12-153)||(18151674-18151806)
chr8 (31-139)||(19956374-19956482)
chr8 (27-154)||(22461656-22461783)
chr8 (15-101)||(13430699-13430785)
chr8 (12-66)||(25164061-25164115)
chr8 (14-52)||(3843730-3843768)
chr8 (12-58)||(21288394-21288440)
chr8 (14-52)||(23370756-23370794)
chr8 (15-52)||(1750302-1750339)
chr8 (15-52)||(6318551-6318588)
chr8 (15-52)||(18153943-18153980)
chr8 (15-52)||(18158463-18158500)
chr8 (15-52)||(18769172-18769209)
chr8 (15-52)||(31215224-31215261)
chr8 (201-265)||(3598255-3598319)
[»] chr3 (85 HSPs)
chr3 (12-265)||(28582104-28582357)
chr3 (12-269)||(2561186-2561443)
chr3 (12-265)||(18121530-18121783)
chr3 (12-244)||(49642691-49642923)
chr3 (12-228)||(18142697-18142913)
chr3 (12-237)||(14392940-14393165)
chr3 (28-265)||(14969341-14969578)
chr3 (26-250)||(38177566-38177790)
chr3 (14-265)||(47207706-47207958)
chr3 (12-250)||(20646152-20646391)
chr3 (12-250)||(40799872-40800108)
chr3 (12-250)||(47405346-47405582)
chr3 (12-250)||(6090730-6090968)
chr3 (12-250)||(13948334-13948572)
chr3 (20-194)||(41495005-41495179)
chr3 (12-237)||(37467331-37467556)
chr3 (12-250)||(31303384-31303622)
chr3 (12-250)||(15903196-15903435)
chr3 (12-265)||(12962995-12963246)
chr3 (12-217)||(12726186-12726391)
chr3 (20-209)||(17238886-17239075)
chr3 (12-179)||(13780578-13780745)
chr3 (12-250)||(52920404-52920641)
chr3 (36-213)||(13824091-13824268)
chr3 (12-217)||(49553445-49553650)
chr3 (12-250)||(16658541-16658779)
chr3 (30-269)||(19888850-19889088)
chr3 (26-265)||(11223575-11223812)
chr3 (12-250)||(20627356-20627592)
chr3 (12-265)||(53056637-53056888)
chr3 (20-265)||(29951347-29951591)
chr3 (20-265)||(30000501-30000745)
chr3 (26-265)||(14955439-14955676)
chr3 (26-265)||(46349754-46349991)
chr3 (12-217)||(24775492-24775695)
chr3 (26-265)||(2785076-2785314)
chr3 (12-151)||(16032523-16032662)
chr3 (12-217)||(22140762-22140965)
chr3 (12-133)||(25398295-25398416)
chr3 (11-153)||(21640864-21641006)
chr3 (12-201)||(12388845-12389033)
chr3 (26-195)||(20725099-20725267)
chr3 (26-153)||(33583241-33583369)
chr3 (26-228)||(5213589-5213788)
chr3 (12-265)||(29855407-29855659)
chr3 (76-265)||(11869130-11869317)
chr3 (12-148)||(22804048-22804184)
chr3 (27-154)||(23538185-23538312)
chr3 (12-265)||(46796287-46796528)
chr3 (14-118)||(11909079-11909183)
chr3 (12-83)||(11868267-11868338)
chr3 (27-201)||(19249385-19249558)
chr3 (12-101)||(21636742-21636831)
chr3 (26-154)||(12968318-12968446)
chr3 (12-101)||(21605726-21605815)
chr3 (36-163)||(50300245-50300372)
chr3 (14-52)||(1053905-1053943)
chr3 (159-216)||(25398230-25398287)
chr3 (26-154)||(26417698-26417826)
chr3 (102-265)||(49666325-49666485)
chr3 (47-118)||(45858804-45858875)
chr3 (14-57)||(51341011-51341054)
chr3 (14-52)||(1064334-1064372)
chr3 (12-58)||(1728130-1728176)
chr3 (14-52)||(4404468-4404506)
chr3 (14-52)||(4457111-4457149)
chr3 (26-108)||(6253431-6253512)
chr3 (14-52)||(8995957-8995995)
chr3 (14-52)||(9006509-9006547)
chr3 (14-52)||(14321683-14321721)
chr3 (14-52)||(15216341-15216379)
chr3 (14-52)||(16077125-16077163)
chr3 (14-52)||(17281434-17281472)
chr3 (14-52)||(27883579-27883617)
chr3 (14-52)||(28169277-28169315)
chr3 (14-52)||(29933559-29933597)
chr3 (14-52)||(29982713-29982751)
chr3 (12-58)||(30054332-30054378)
chr3 (15-52)||(6490350-6490387)
chr3 (15-52)||(6501004-6501041)
chr3 (15-52)||(11216722-11216759)
chr3 (15-52)||(16666128-16666165)
chr3 (15-52)||(23635907-23635944)
chr3 (15-52)||(38314896-38314933)
chr3 (26-58)||(49666520-49666552)
[»] scaffold0251 (1 HSPs)
scaffold0251 (20-258)||(7710-7948)
[»] chr7 (81 HSPs)
chr7 (12-263)||(9069557-9069808)
chr7 (12-265)||(15088515-15088768)
chr7 (12-263)||(33691624-33691875)
chr7 (12-264)||(44467059-44467312)
chr7 (12-243)||(13137827-13138058)
chr7 (20-249)||(10883099-10883328)
chr7 (12-217)||(21283331-21283536)
chr7 (12-265)||(21695396-21695649)
chr7 (26-250)||(15467925-15468149)
chr7 (12-265)||(2913518-2913771)
chr7 (12-265)||(30025900-30026153)
chr7 (12-237)||(22577959-22578184)
chr7 (26-259)||(23279875-23280107)
chr7 (12-250)||(13880099-13880337)
chr7 (12-265)||(48236814-48237065)
chr7 (12-265)||(2500033-2500286)
chr7 (12-217)||(28409034-28409239)
chr7 (12-240)||(13302805-13303033)
chr7 (12-237)||(24788136-24788361)
chr7 (12-250)||(9709729-9709965)
chr7 (12-250)||(11319400-11319638)
chr7 (13-217)||(30945316-30945518)
chr7 (12-265)||(33605680-33605932)
chr7 (12-250)||(11792902-11793140)
chr7 (12-265)||(28622268-28622519)
chr7 (12-217)||(30944283-30944486)
chr7 (12-209)||(21692282-21692479)
chr7 (12-217)||(16316515-16316720)
chr7 (12-265)||(39284475-39284727)
chr7 (12-216)||(13648724-13648928)
chr7 (12-209)||(13730641-13730838)
chr7 (26-195)||(19237024-19237192)
chr7 (12-146)||(14193109-14193243)
chr7 (12-217)||(14426542-14426745)
chr7 (12-265)||(331640-331894)
chr7 (28-217)||(12366706-12366895)
chr7 (12-237)||(29935297-29935521)
chr7 (12-265)||(35952599-35952851)
chr7 (12-265)||(4821469-4821719)
chr7 (12-151)||(16111908-16112047)
chr7 (12-208)||(5000788-5000985)
chr7 (14-187)||(13018494-13018666)
chr7 (34-173)||(12174342-12174482)
chr7 (38-237)||(13692372-13692562)
chr7 (33-195)||(13880604-13880766)
chr7 (75-265)||(16542932-16543120)
chr7 (75-265)||(16622542-16622730)
chr7 (29-250)||(2265446-2265665)
chr7 (12-121)||(16309961-16310070)
chr7 (71-195)||(15704479-15704603)
chr7 (12-237)||(13260561-13260778)
chr7 (12-265)||(8182925-8183175)
chr7 (26-208)||(13893966-13894147)
chr7 (9-105)||(1293022-1293118)
chr7 (12-128)||(19711060-19711176)
chr7 (62-149)||(16556664-16556751)
chr7 (62-149)||(16608911-16608998)
chr7 (12-194)||(41842254-41842436)
chr7 (145-217)||(4494634-4494706)
chr7 (26-101)||(19339324-19339399)
chr7 (12-101)||(27871713-27871803)
chr7 (90-179)||(13472576-13472665)
chr7 (14-101)||(14425444-14425531)
chr7 (36-138)||(9098283-9098385)
chr7 (12-105)||(48062890-48062983)
chr7 (12-68)||(4494572-4494628)
chr7 (12-58)||(24794832-24794878)
chr7 (184-244)||(14193241-14193301)
chr7 (14-52)||(3476421-3476459)
chr7 (12-58)||(4412079-4412125)
chr7 (14-52)||(6044292-6044330)
chr7 (14-52)||(8933701-8933739)
chr7 (14-52)||(13682502-13682540)
chr7 (14-52)||(15216498-15216536)
chr7 (14-52)||(18419296-18419334)
chr7 (14-52)||(18441377-18441415)
chr7 (14-52)||(40054835-40054873)
chr7 (15-52)||(19985894-19985931)
chr7 (15-52)||(30049701-30049738)
chr7 (15-52)||(31116592-31116629)
chr7 (12-101)||(48805953-48806042)
[»] chr1 (61 HSPs)
chr1 (12-250)||(22600026-22600264)
chr1 (12-250)||(1900343-1900581)
chr1 (13-265)||(32785767-32786018)
chr1 (12-261)||(22427192-22427439)
chr1 (12-265)||(28492233-28492486)
chr1 (12-250)||(38282565-38282802)
chr1 (12-237)||(33256208-33256433)
chr1 (12-237)||(33276380-33276605)
chr1 (12-238)||(22153855-22154081)
chr1 (20-250)||(20954317-20954547)
chr1 (26-250)||(35401821-35402043)
chr1 (12-265)||(16235127-16235378)
chr1 (16-265)||(39200823-39201070)
chr1 (12-237)||(1577865-1578090)
chr1 (12-209)||(19717522-19717719)
chr1 (18-250)||(23036373-23036603)
chr1 (12-261)||(22464643-22464891)
chr1 (12-265)||(36134188-36134438)
chr1 (12-236)||(48704202-48704426)
chr1 (12-195)||(2267087-2267270)
chr1 (12-234)||(2268529-2268748)
chr1 (12-216)||(22201614-22201818)
chr1 (12-250)||(29215795-29216031)
chr1 (12-265)||(10757419-10757671)
chr1 (12-254)||(12284421-12284661)
chr1 (12-265)||(25448395-25448648)
chr1 (12-265)||(48570063-48570313)
chr1 (12-265)||(35040164-35040415)
chr1 (26-265)||(2834702-2834938)
chr1 (12-269)||(26701954-26702211)
chr1 (26-250)||(7309831-7310054)
chr1 (26-174)||(14263371-14263519)
chr1 (12-265)||(21028791-21029044)
chr1 (9-154)||(21191805-21191950)
chr1 (12-265)||(44821376-44821627)
chr1 (19-265)||(17024796-17025039)
chr1 (12-265)||(2327270-2327522)
chr1 (12-265)||(21702812-21703062)
chr1 (12-217)||(30893090-30893296)
chr1 (12-156)||(12613753-12613896)
chr1 (12-265)||(46088987-46089229)
chr1 (16-153)||(30572199-30572336)
chr1 (19-154)||(18896537-18896672)
chr1 (12-101)||(21121057-21121146)
chr1 (28-101)||(42284642-42284715)
chr1 (12-258)||(10250984-10251218)
chr1 (26-101)||(21984608-21984683)
chr1 (12-101)||(21135153-21135242)
chr1 (12-101)||(37642246-37642335)
chr1 (26-118)||(7745066-7745158)
chr1 (14-57)||(17371042-17371085)
chr1 (26-101)||(21204916-21204991)
chr1 (14-52)||(9050532-9050570)
chr1 (14-52)||(12946840-12946878)
chr1 (14-52)||(18381948-18381986)
chr1 (12-58)||(19215610-19215656)
chr1 (12-58)||(23024786-23024832)
chr1 (14-52)||(35013047-35013085)
chr1 (15-52)||(20441361-20441398)
chr1 (15-52)||(39587095-39587132)
chr1 (15-52)||(47195387-47195424)
[»] chr6 (68 HSPs)
chr6 (12-265)||(32544264-32544517)
chr6 (12-260)||(18435555-18435803)
chr6 (12-237)||(9717842-9718067)
chr6 (12-260)||(26972130-26972376)
chr6 (12-237)||(15531549-15531774)
chr6 (12-265)||(20112596-20112850)
chr6 (12-265)||(22802140-22802391)
chr6 (13-265)||(20730603-20730853)
chr6 (14-265)||(29918018-29918266)
chr6 (12-265)||(12715318-12715570)
chr6 (26-250)||(13435545-13435769)
chr6 (12-265)||(16265049-16265300)
chr6 (15-250)||(21625103-21625335)
chr6 (12-243)||(13602171-13602402)
chr6 (26-217)||(14100385-14100576)
chr6 (13-250)||(23284564-23284801)
chr6 (12-209)||(15302199-15302396)
chr6 (9-265)||(15954699-15954953)
chr6 (12-265)||(19086157-19086399)
chr6 (36-217)||(19688789-19688968)
chr6 (12-179)||(18378313-18378480)
chr6 (12-193)||(15987232-15987414)
chr6 (12-265)||(22076306-22076557)
chr6 (26-265)||(21618257-21618494)
chr6 (14-237)||(19623980-19624203)
chr6 (12-217)||(24116827-24117033)
chr6 (43-265)||(34451568-34451787)
chr6 (92-243)||(25597558-25597709)
chr6 (16-153)||(20487927-20488064)
chr6 (12-265)||(16877212-16877463)
chr6 (12-173)||(16336126-16336287)
chr6 (26-258)||(19832938-19833169)
chr6 (26-265)||(21235138-21235363)
chr6 (26-195)||(10640386-10640555)
chr6 (15-153)||(12348995-12349133)
chr6 (14-156)||(26943577-26943719)
chr6 (13-176)||(12423261-12423423)
chr6 (26-156)||(19470683-19470813)
chr6 (12-100)||(25594067-25594155)
chr6 (12-101)||(19066079-19066168)
chr6 (12-90)||(17381520-17381598)
chr6 (12-265)||(33351828-33352076)
chr6 (201-265)||(17608222-17608286)
chr6 (14-57)||(20635720-20635763)
chr6 (14-57)||(22386803-22386846)
chr6 (14-52)||(4292872-4292910)
chr6 (14-52)||(5845230-5845268)
chr6 (14-52)||(7751247-7751285)
chr6 (14-52)||(8653806-8653844)
chr6 (14-52)||(16123549-16123587)
chr6 (12-58)||(17316629-17316675)
chr6 (14-52)||(17741714-17741752)
chr6 (14-52)||(18826250-18826288)
chr6 (14-52)||(18834646-18834684)
chr6 (12-58)||(19482751-19482797)
chr6 (14-52)||(25518836-25518874)
chr6 (14-52)||(29765681-29765719)
chr6 (14-52)||(31572560-31572598)
chr6 (15-52)||(6158354-6158391)
chr6 (15-52)||(12827840-12827877)
chr6 (15-52)||(13913196-13913233)
chr6 (15-52)||(17042769-17042806)
chr6 (19-52)||(17608417-17608450)
chr6 (15-52)||(18925774-18925811)
chr6 (204-265)||(19065926-19065987)
chr6 (26-75)||(19625821-19625869)
chr6 (12-101)||(26589598-26589690)
chr6 (221-265)||(19482930-19482974)
[»] chr2 (70 HSPs)
chr2 (12-265)||(22317586-22317840)
chr2 (12-250)||(23235000-23235238)
chr2 (12-265)||(13963832-13964085)
chr2 (12-237)||(25829127-25829352)
chr2 (20-237)||(20568632-20568849)
chr2 (12-250)||(30666982-30667220)
chr2 (26-265)||(6573978-6574217)
chr2 (12-250)||(22187971-22188209)
chr2 (12-265)||(18376760-18377013)
chr2 (36-265)||(20151890-20152118)
chr2 (13-250)||(30621210-30621447)
chr2 (13-250)||(30623831-30624068)
chr2 (14-250)||(21537117-21537353)
chr2 (12-250)||(25037128-25037366)
chr2 (12-250)||(25041235-25041473)
chr2 (12-237)||(19540409-19540634)
chr2 (20-217)||(9015272-9015467)
chr2 (12-265)||(24377094-24377347)
chr2 (12-237)||(24576028-24576254)
chr2 (12-207)||(38781391-38781587)
chr2 (12-250)||(24850534-24850773)
chr2 (12-237)||(10009631-10009857)
chr2 (12-237)||(40782470-40782689)
chr2 (12-265)||(28711553-28711805)
chr2 (12-153)||(31800853-31800994)
chr2 (12-265)||(39037496-39037749)
chr2 (26-265)||(34321792-34322029)
chr2 (45-216)||(22260432-22260603)
chr2 (12-265)||(33074219-33074470)
chr2 (26-164)||(6392640-6392779)
chr2 (12-194)||(24779336-24779518)
chr2 (15-153)||(28701195-28701333)
chr2 (12-209)||(28140529-28140726)
chr2 (34-173)||(45087130-45087269)
chr2 (26-265)||(31327821-31328059)
chr2 (26-265)||(31334542-31334780)
chr2 (26-217)||(22802467-22802656)
chr2 (12-250)||(22454859-22455097)
chr2 (12-265)||(35743858-35744107)
chr2 (26-265)||(30557175-30557414)
chr2 (12-195)||(41121644-41121826)
chr2 (12-201)||(25189391-25189579)
chr2 (26-154)||(26619066-26619194)
chr2 (97-237)||(7609039-7609180)
chr2 (12-105)||(28550932-28551025)
chr2 (12-105)||(44840427-44840520)
chr2 (12-105)||(22776302-22776395)
chr2 (12-105)||(22781680-22781773)
chr2 (12-156)||(23595532-23595674)
chr2 (12-105)||(40332080-40332173)
chr2 (26-104)||(3277037-3277115)
chr2 (12-105)||(14581508-14581601)
chr2 (12-101)||(31968061-31968150)
chr2 (26-105)||(1587047-1587126)
chr2 (26-154)||(22272139-22272268)
chr2 (12-77)||(23184346-23184411)
chr2 (26-154)||(44881174-44881302)
chr2 (26-153)||(19115090-19115217)
chr2 (26-105)||(22785669-22785748)
chr2 (26-101)||(23392686-23392761)
chr2 (26-154)||(18430905-18431033)
chr2 (26-57)||(24814645-24814676)
chr2 (14-52)||(967522-967560)
chr2 (14-52)||(22763826-22763864)
chr2 (14-52)||(24275197-24275235)
chr2 (14-52)||(27978402-27978440)
chr2 (14-52)||(28064931-28064969)
chr2 (14-52)||(36784824-36784862)
chr2 (14-52)||(38586107-38586145)
chr2 (15-52)||(28374534-28374571)
[»] scaffold0227 (1 HSPs)
scaffold0227 (12-261)||(22675-22924)
[»] chr4 (70 HSPs)
chr4 (12-265)||(19884695-19884947)
chr4 (12-237)||(37435428-37435653)
chr4 (36-261)||(3483738-3483963)
chr4 (12-237)||(16632433-16632658)
chr4 (12-214)||(19666365-19666567)
chr4 (12-250)||(29680424-29680662)
chr4 (12-250)||(45833387-45833625)
chr4 (12-265)||(3395583-3395836)
chr4 (12-238)||(12811070-12811293)
chr4 (26-263)||(56034581-56034816)
chr4 (20-209)||(12601102-12601291)
chr4 (18-195)||(22675455-22675632)
chr4 (12-217)||(37985525-37985730)
chr4 (12-250)||(13575996-13576232)
chr4 (26-265)||(413009-413246)
chr4 (12-244)||(10072928-10073159)
chr4 (14-217)||(14604819-14605023)
chr4 (12-265)||(10692844-10693095)
chr4 (12-265)||(10906610-10906861)
chr4 (26-265)||(17247251-17247487)
chr4 (12-204)||(9140905-9141097)
chr4 (20-250)||(19911760-19911991)
chr4 (72-249)||(14833449-14833626)
chr4 (12-240)||(14904246-14904474)
chr4 (12-217)||(19620974-19621179)
chr4 (12-265)||(6517478-6517729)
chr4 (12-209)||(55380283-55380480)
chr4 (12-176)||(29121363-29121527)
chr4 (26-250)||(54679937-54680157)
chr4 (20-250)||(40846100-40846330)
chr4 (12-234)||(6641677-6641898)
chr4 (26-163)||(8105644-8105782)
chr4 (15-176)||(16940012-16940172)
chr4 (26-154)||(11915707-11915835)
chr4 (26-150)||(25651084-25651208)
chr4 (116-250)||(23123528-23123662)
chr4 (12-111)||(16853496-16853595)
chr4 (26-173)||(56533018-56533166)
chr4 (12-217)||(3105335-3105537)
chr4 (12-105)||(17398699-17398792)
chr4 (12-250)||(23750515-23750751)
chr4 (83-244)||(15139291-15139453)
chr4 (12-101)||(22190839-22190928)
chr4 (12-101)||(38513871-38513960)
chr4 (12-101)||(40860660-40860749)
chr4 (14-52)||(5873584-5873622)
chr4 (14-105)||(33378406-33378489)
chr4 (12-101)||(9751569-9751658)
chr4 (14-109)||(17788067-17788164)
chr4 (75-176)||(55731836-55731936)
chr4 (26-58)||(1672396-1672428)
chr4 (26-58)||(1674871-1674903)
chr4 (201-265)||(3793303-3793367)
chr4 (26-100)||(3499682-3499756)
chr4 (26-64)||(8685509-8685547)
chr4 (14-52)||(11515250-11515288)
chr4 (14-52)||(11536060-11536098)
chr4 (222-260)||(14153874-14153912)
chr4 (12-58)||(20977450-20977496)
chr4 (12-58)||(39419806-39419852)
chr4 (14-52)||(49001985-49002023)
chr4 (14-52)||(55651539-55651577)
chr4 (15-52)||(4987489-4987526)
chr4 (15-52)||(10909624-10909661)
chr4 (15-52)||(16305322-16305359)
chr4 (15-52)||(16317546-16317583)
chr4 (26-79)||(17540402-17540455)
chr4 (15-52)||(19581456-19581493)
chr4 (15-52)||(24713646-24713683)
chr4 (37-154)||(41114746-41114863)
[»] chr5 (56 HSPs)
chr5 (12-265)||(41566323-41566576)
chr5 (12-265)||(33022659-33022910)
chr5 (12-265)||(23412865-23413116)
chr5 (12-237)||(17814963-17815188)
chr5 (12-265)||(6512322-6512570)
chr5 (12-237)||(7745610-7745835)
chr5 (12-237)||(21910551-21910776)
chr5 (20-265)||(26784357-26784602)
chr5 (12-217)||(20550890-20551095)
chr5 (12-250)||(21072145-21072382)
chr5 (12-226)||(13545448-13545654)
chr5 (12-265)||(4887017-4887268)
chr5 (12-237)||(89339-89564)
chr5 (12-265)||(11993883-11994134)
chr5 (12-173)||(31117872-31118033)
chr5 (12-217)||(19536237-19536443)
chr5 (26-269)||(15516978-15517219)
chr5 (26-265)||(26759158-26759395)
chr5 (12-173)||(33933262-33933424)
chr5 (12-265)||(29138299-29138548)
chr5 (26-265)||(42243689-42243927)
chr5 (26-217)||(30742989-30743178)
chr5 (26-153)||(26765507-26765634)
chr5 (12-173)||(14086519-14086681)
chr5 (12-250)||(23881062-23881299)
chr5 (12-265)||(3245333-3245583)
chr5 (26-201)||(25096777-25096954)
chr5 (26-201)||(25154747-25154924)
chr5 (12-107)||(12352842-12352937)
chr5 (26-104)||(642757-642835)
chr5 (12-130)||(30115861-30115979)
chr5 (12-104)||(6499234-6499326)
chr5 (12-128)||(28139602-28139718)
chr5 (12-104)||(21099754-21099846)
chr5 (12-265)||(28464240-28464481)
chr5 (12-109)||(21199048-21199145)
chr5 (12-104)||(9088964-9089056)
chr5 (12-104)||(9398784-9398876)
chr5 (12-104)||(25930206-25930298)
chr5 (26-118)||(32160775-32160867)
chr5 (14-128)||(11208012-11208125)
chr5 (12-101)||(35932059-35932148)
chr5 (12-105)||(10848768-10848861)
chr5 (14-52)||(17446797-17446835)
chr5 (14-52)||(20417022-20417060)
chr5 (14-52)||(21414300-21414338)
chr5 (14-52)||(32754047-32754085)
chr5 (14-52)||(34062741-34062779)
chr5 (15-52)||(20797816-20797853)
chr5 (15-52)||(21703231-21703268)
chr5 (15-52)||(21706078-21706115)
chr5 (15-52)||(30070009-30070046)
chr5 (201-265)||(5430066-5430130)
chr5 (201-269)||(10848946-10849014)
chr5 (16-52)||(17457415-17457451)
chr5 (26-58)||(21660221-21660253)
[»] scaffold0003 (1 HSPs)
scaffold0003 (12-265)||(89916-90167)
[»] scaffold0084 (4 HSPs)
scaffold0084 (12-265)||(32484-32737)
scaffold0084 (12-250)||(49331-49569)
scaffold0084 (26-128)||(341-443)
scaffold0084 (14-52)||(56822-56860)
[»] scaffold0171 (1 HSPs)
scaffold0171 (12-269)||(27286-27541)
[»] scaffold0290 (1 HSPs)
scaffold0290 (12-243)||(18502-18733)
[»] scaffold0161 (2 HSPs)
scaffold0161 (9-250)||(9981-10223)
scaffold0161 (9-80)||(14816-14887)
[»] scaffold0065 (1 HSPs)
scaffold0065 (12-237)||(1689-1914)
[»] scaffold0861 (1 HSPs)
scaffold0861 (31-243)||(4828-5040)
[»] scaffold0479 (1 HSPs)
scaffold0479 (12-265)||(9968-10219)
[»] scaffold0120 (2 HSPs)
scaffold0120 (12-250)||(36649-36887)
scaffold0120 (12-250)||(42118-42356)
[»] scaffold0210 (1 HSPs)
scaffold0210 (12-237)||(1659-1884)
[»] scaffold0411 (1 HSPs)
scaffold0411 (12-250)||(12208-12446)
[»] scaffold0337 (1 HSPs)
scaffold0337 (12-206)||(14647-14841)
[»] scaffold0004 (4 HSPs)
scaffold0004 (12-250)||(377433-377671)
scaffold0004 (20-250)||(220245-220474)
scaffold0004 (26-152)||(244256-244382)
scaffold0004 (12-153)||(211397-211538)
[»] scaffold0771 (1 HSPs)
scaffold0771 (12-250)||(474-712)
[»] scaffold0083 (2 HSPs)
scaffold0083 (12-250)||(25849-26087)
scaffold0083 (46-176)||(44652-44782)
[»] scaffold0116 (1 HSPs)
scaffold0116 (12-244)||(20851-21083)
[»] scaffold0023 (1 HSPs)
scaffold0023 (18-217)||(103577-103776)
[»] scaffold0026 (2 HSPs)
scaffold0026 (12-237)||(60015-60240)
scaffold0026 (12-217)||(7925-8130)
[»] scaffold0005 (2 HSPs)
scaffold0005 (14-217)||(212355-212559)
scaffold0005 (72-249)||(6073-6250)
[»] scaffold0043 (1 HSPs)
scaffold0043 (12-265)||(78227-78478)
[»] scaffold0146 (1 HSPs)
scaffold0146 (20-209)||(15124-15313)
[»] scaffold0022 (5 HSPs)
scaffold0022 (76-264)||(39488-39676)
scaffold0022 (76-264)||(137548-137736)
scaffold0022 (12-74)||(37401-37463)
scaffold0022 (12-74)||(135461-135523)
scaffold0022 (12-193)||(159054-159234)
[»] scaffold0439 (1 HSPs)
scaffold0439 (12-265)||(6601-6852)
[»] scaffold0012 (2 HSPs)
scaffold0012 (12-265)||(215358-215609)
scaffold0012 (14-52)||(140983-141021)
[»] scaffold0359 (1 HSPs)
scaffold0359 (12-217)||(5597-5802)
[»] scaffold0471 (1 HSPs)
scaffold0471 (12-265)||(3303-3554)
[»] scaffold0035 (2 HSPs)
scaffold0035 (11-237)||(19359-19585)
scaffold0035 (12-265)||(99069-99317)
[»] scaffold0047 (2 HSPs)
scaffold0047 (72-249)||(30283-30460)
scaffold0047 (12-195)||(9902-10084)
[»] scaffold1359 (2 HSPs)
scaffold1359 (12-175)||(604-767)
scaffold1359 (14-101)||(1778-1865)
[»] scaffold0426 (1 HSPs)
scaffold0426 (12-179)||(13570-13737)
[»] scaffold0176 (1 HSPs)
scaffold0176 (14-264)||(9156-9403)
[»] scaffold0015 (1 HSPs)
scaffold0015 (9-265)||(60799-61053)
[»] scaffold1434 (1 HSPs)
scaffold1434 (86-237)||(673-824)
[»] scaffold1331 (2 HSPs)
scaffold1331 (12-217)||(1608-1811)
scaffold1331 (222-265)||(472-515)
[»] scaffold0028 (1 HSPs)
scaffold0028 (12-176)||(5550-5714)
[»] scaffold0364 (1 HSPs)
scaffold0364 (26-265)||(6020-6256)
[»] scaffold0193 (1 HSPs)
scaffold0193 (12-269)||(15792-16048)
[»] scaffold0011 (3 HSPs)
scaffold0011 (71-265)||(65290-65481)
scaffold0011 (71-265)||(144335-144526)
scaffold0011 (26-128)||(164942-165044)
[»] scaffold0414 (1 HSPs)
scaffold0414 (26-263)||(7019-7254)
[»] scaffold0243 (1 HSPs)
scaffold0243 (130-244)||(4873-4987)
[»] scaffold0324 (1 HSPs)
scaffold0324 (15-201)||(9958-10144)
[»] scaffold0040 (1 HSPs)
scaffold0040 (25-154)||(1491-1620)
[»] scaffold0273 (1 HSPs)
scaffold0273 (19-154)||(5633-5767)
[»] scaffold0334 (1 HSPs)
scaffold0334 (43-237)||(9825-10019)
[»] scaffold0056 (3 HSPs)
scaffold0056 (14-194)||(36115-36294)
scaffold0056 (12-101)||(25688-25777)
scaffold0056 (12-101)||(34827-34916)
[»] scaffold0280 (1 HSPs)
scaffold0280 (12-153)||(2702-2842)
[»] scaffold0261 (1 HSPs)
scaffold0261 (142-262)||(5801-5922)
[»] scaffold0247 (3 HSPs)
scaffold0247 (12-128)||(25395-25511)
scaffold0247 (137-265)||(23424-23549)
scaffold0247 (12-52)||(15811-15851)
[»] scaffold0220 (1 HSPs)
scaffold0220 (14-118)||(1803-1907)
[»] scaffold1747 (1 HSPs)
scaffold1747 (26-104)||(1330-1408)
[»] scaffold1745 (1 HSPs)
scaffold1745 (26-104)||(3-81)
[»] scaffold0211 (1 HSPs)
scaffold0211 (26-128)||(15618-15720)
[»] scaffold0132 (1 HSPs)
scaffold0132 (26-124)||(38085-38183)
[»] scaffold0249 (1 HSPs)
scaffold0249 (12-265)||(17636-17877)
[»] scaffold0081 (1 HSPs)
scaffold0081 (26-156)||(40650-40780)
[»] scaffold0527 (1 HSPs)
scaffold0527 (44-153)||(7963-8072)
[»] scaffold0064 (1 HSPs)
scaffold0064 (26-201)||(43843-44017)
[»] scaffold0387 (1 HSPs)
scaffold0387 (15-101)||(7383-7469)
[»] scaffold0530 (1 HSPs)
scaffold0530 (29-80)||(2039-2090)
[»] scaffold0908 (1 HSPs)
scaffold0908 (29-82)||(3937-3990)
[»] scaffold0352 (1 HSPs)
scaffold0352 (26-99)||(846-919)
[»] scaffold0045 (1 HSPs)
scaffold0045 (12-101)||(87623-87712)
[»] scaffold0025 (1 HSPs)
scaffold0025 (20-113)||(74588-74681)
[»] scaffold0050 (1 HSPs)
scaffold0050 (201-265)||(35403-35467)
[»] scaffold1321 (1 HSPs)
scaffold1321 (26-57)||(1002-1033)
[»] scaffold1263 (1 HSPs)
scaffold1263 (26-57)||(1195-1226)
[»] scaffold0177 (1 HSPs)
scaffold0177 (14-57)||(20444-20487)
[»] scaffold0078 (1 HSPs)
scaffold0078 (26-101)||(31808-31882)
[»] scaffold0018 (1 HSPs)
scaffold0018 (26-57)||(6589-6620)
[»] scaffold0009 (1 HSPs)
scaffold0009 (12-47)||(84394-84429)
[»] scaffold1477 (1 HSPs)
scaffold1477 (14-52)||(1701-1739)
[»] scaffold0481 (1 HSPs)
scaffold0481 (14-52)||(12865-12903)
[»] scaffold0473 (1 HSPs)
scaffold0473 (12-58)||(2757-2803)
[»] scaffold0410 (1 HSPs)
scaffold0410 (14-52)||(15907-15945)
[»] scaffold0407 (1 HSPs)
scaffold0407 (14-52)||(12156-12194)
[»] scaffold0201 (1 HSPs)
scaffold0201 (14-52)||(7408-7446)
[»] scaffold0154 (1 HSPs)
scaffold0154 (14-52)||(35715-35753)
[»] scaffold0142 (1 HSPs)
scaffold0142 (14-52)||(40680-40718)
[»] scaffold0102 (1 HSPs)
scaffold0102 (14-52)||(52143-52181)
[»] scaffold0627 (1 HSPs)
scaffold0627 (15-52)||(8103-8140)
[»] scaffold0322 (1 HSPs)
scaffold0322 (15-52)||(6926-6963)
[»] scaffold0272 (1 HSPs)
scaffold0272 (15-52)||(13648-13685)
[»] scaffold0269 (1 HSPs)
scaffold0269 (29-82)||(7301-7354)
[»] scaffold0267 (1 HSPs)
scaffold0267 (15-52)||(6259-6296)
[»] scaffold0216 (1 HSPs)
scaffold0216 (15-52)||(118-155)
[»] scaffold0072 (1 HSPs)
scaffold0072 (15-52)||(36775-36812)
[»] scaffold0068 (2 HSPs)
scaffold0068 (15-52)||(7795-7832)
scaffold0068 (15-52)||(10642-10679)
[»] scaffold0099 (1 HSPs)
scaffold0099 (16-52)||(19430-19466)


Alignment Details
Target: scaffold0007 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 14 - 269
Target Start/End: Original strand, 143098 - 143344
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcctt 113  Q
    |||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  143098 agacaaaaactaagtagtggaggtagtggttgtac---------acttgtacttttccaacgctctttgaagaacaagcatccaatgcctttaaatcctt 143188  T
Q  114 ccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatga 213  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  143189 ccaaaatagtcgttgcttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcgtga 143288  T
Q  214 tgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatgatgtc 269  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  143289 tgaaatagagcttctagtgatcttcagcttctgatgaacttgcttctgatgatgtc 143344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 198; Significance: 1e-108; HSPs: 3)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 19030 - 19283
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  19030 agagacaaaaactgagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaagaacaagcatcaaatgcctttaaatcc 19129  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||| | |    
T  19130 ttccaaaatagccgttgcttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaacagcctttcaagctttaagtcttgtatcacct 19229  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||||||||||||| |||||||||| |||| ||| ||||||||||||||||    
T  19230 gatgaaatagagcttctggtgatcttcaacttctgataaacttgcttctgatga 19283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 9559 - 9809
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||| | ||||| |  ||||||| |||| | || |||||||||||||| || |||||    
T  9559 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacagtcgtactatgtcaacgctgtttgtagaataagcatccaatgcccttcaatcc 9658  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |  ||| | ||||||||||||||| ||| ||| || || ||||| |  || | | ||| ||||||| ||  ||||||||| |    
T  9659 tttcaaaatagtcgttgctatactttcccagtcttctgcaat-cttagacaagtttgaatccttgaaacaacttttgaagctttaag--ttgcatctcct 9755  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| |||||   ||||||  ||||||||||||||||||||    
T  9756 gatgaactgcagcttctggtgattcacagcttatgatgaacttgcttctgatga 9809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 22243 - 21992
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||| ||||| ||||||||||||||||||||||   ||| | |  |||||||| ||||| || ||||||||||||||||  |||||    
T  22243 agagacaaaaacagagtactggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctcattgaagaataagcatccaatgccttccaatcc 22144  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||| || |||||||||| |  |||  ||||||||||||||||  || |||||| || ||||| || || | | ||| || |||| ||  ||||||||  |    
T  22143 ttcaaagatagtcgttgctatacttctccagtcttctgcaatctttagacgagttttaatcctttaaacaacttttgaacctttaag--ttgcatcttct 22046  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
     ||||| || | ||||| |||||   ||||||| ||| ||||||||||||||||    
T  22045 aatgaactacaacttctggtgattcacagcttctgataaacttgcttctgatga 21992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 172; Significance: 2e-92; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 12 - 263
Target Start/End: Original strand, 21932874 - 21933125
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||| || ||||||  |||||||||||||||||||||||| ||||||||||||||||    
T  21932874 agagacaaacactgagtagtggaggtagtggttgtacacttcgtacaattttactttgtcaacgctctttgaaaaacaagcatacaatgcctttaaatcc 21932973  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||| ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||| | ||||| ||||||| ||||||||||||| |    
T  21932974 tttcaaaatagccgttgtttcactctttcagtcttatgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 21933073  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgat 263  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  21933074 gatgaaatagagcttctggtgattttcagcttctgatgaacttgcttctgat 21933125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 12757923 - 12757670
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  || ||||||||||||||||||| ||||||    
T  12757923 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 12757824  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| ||||||||| |||||||||||||||||| ||||||||||||||||||||| | ||||| ||| ||| ||||||||||||| |    
T  12757823 tttcaaaatagttgttgcttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacatcctttaaagttttaagtcttgcatctcct 12757724  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| ||||||| || ||||||||||||||| ||| ||||||||||||||||    
T  12757723 gatgaactagagctactggtgatcttcagcttctgatcaacttgcttctgatga 12757670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 12 - 269
Target Start/End: Original strand, 19156187 - 19156444
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| ||||||||||||| |||||||| |||||||||  ||||||||||  || ||||||||||||||||||| ||||||    
T  19156187 agagacacaaactgagtagtggagatagtggttgtacatttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 19156286  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| ||||||||| |||||||||| ||||||||||||||| | ||||||||||||||||||||| ||||||| ||||||| | ||||||||||| |    
T  19156287 tttcaaattagtcgttgcttcactcttctagtcttctgcaatgcatagacgagattaaatccattgaacagcctttgaagctttaattcttgcatctctt 19156386  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatgatgtc 269  Q
    |||||| || | ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  19156387 gatgaactacaacttctggtgatcttcagcttctgatgaacttgcttctgatgatgtc 19156444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 12 - 244
Target Start/End: Original strand, 16207297 - 16207529
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||| ||||||    
T  16207297 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 16207396  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| || ||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||| ||||||| ||||||||||||| |    
T  16207397 tttcaaaatagtagttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcgtttgaagctttaagtcttgcatctcct 16207496  T
Q  212 gatgaaatagagcttctagtgatcttcagcttc 244  Q
    |||||| |||||||||| |||||||| ||||||    
T  16207497 gatgaactagagcttctggtgatctttagcttc 16207529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 23185386 - 23185135
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  || |||||||||||||||||||||||||||||| |||||||||  |||||||||||||| || |||||||||||||||| ||||||    
T  23185386 agagacaaaaacagagcagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcc 23185287  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| ||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||| | ||||| |||||||   | ||||||||| |    
T  23185286 tttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagcttt--atgttgcatctcct 23185189  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| ||||| ||||||||| ||||||||||||||||||||    
T  23185188 gatgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatga 23185135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 19943226 - 19943466
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaa-aacaagcatccaatgcctttaaatc 110  Q
    |||||| |||||  ||||||||||||||||||||||||||||||||| || ||||||  ||||||| ||| ||  ||||||||||||||||||| |||||    
T  19943226 agagaccaaaacagagtagtggaggtagtggttgtacacttcgtacaattttactttgtcaacgctttttaaaggaacaagcatccaatgccttcaaatc 19943325  T
Q  111 cttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatctc 209  Q
    ||| ||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||| |||||||||||||    
T  19943326 ctttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaatagccttttgaagctttaagtcttgcatctc 19943425  T
Q  210 atgatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
     ||||||| |  |||||||||||||||| |||||| |||||    
T  19943426 ctgatgaacttcagcttctagtgatctttagcttctgatga 19943466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 39693526 - 39693764
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  || |||||||||||||||| || ||||||    
T  39693526 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 39693625  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||| ||| |||||||||||||||||||||||||||| ||||||||| ||||||||||| | ||||| ||||||| ||||||||||||| |    
T  39693626 tttcaaaatagtcattgcttcactcttccagtcttctgcaatgcttagacgagattgaatccattgaacaacctttgaagctttaagtcttgcatctcct 39693725  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||  || | ||||| ||||||||||||||| |||||    
T  39693726 gatgagctacaacttctggtgatcttcagcttctgatga 39693764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 602880 - 602627
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  || |||||||||||||||| || ||||||    
T  602880 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 602781  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||| ||| |||||||||| ||||||||||||||||| ||||||||| |||||| |||| | ||||| ||| ||| |||||||||| || |    
T  602780 tttcaaaatagtcattgcttcactcttcaagtcttctgcaatgcttagacgagattgaatccaatgaacaacctttgaagttttaagtcttgcatttcct 602681  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| |||||||| |||||  ||||||||||||||||||||    
T  602680 gatgaactttagcttcttgtgatctttagcttttgatgaacttgcttctgatga 602627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 18121266 - 18121031
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||  |||||| |||||||||||   |||||||||||| |||||||||   || |||||||||| ||||||||||||||||||||||||||    
T  18121266 agagacagaaacagagtagttgaggtagtggt---acacttcgtacaattgtactttgttaatgctctttgaagaacaagcatccaatgcctttaaatcc 18121170  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||  |||| |||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||| || |||| ||||||||||||| |    
T  18121169 tttcaaaatagcagttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaaactttaagtcttgcatctcct 18121070  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |||||||||| |||||||| |||||| |||||    
T  18121069 gatgaactagagcttctggtgatctttagcttctgatga 18121031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 16681463 - 16681238
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||| | ||| |||||||||||||||||||||| ||||||| |  ||||||||||  || |||||||||| |||||||| ||||||    
T  16681463 agagacacaaactgagtactagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatctaatgccttcaaatcc 16681364  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| ||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||| | ||||||||||||| |    
T  16681363 tttcaaactagacgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctctaagtcttgcatctcct 16681264  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    |||||| |  ||||||||||||||||    
T  16681263 gatgaactttagcttctagtgatctt 16681238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 12 - 244
Target Start/End: Complemental strand, 17441967 - 17441736
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||| | |||||||||| |||||||||||||||| ||||| |||||||||  ||||||||||  || || ||||||||||||| || ||||||    
T  17441967 agagacacaaaatgagtagtggagatagtggttgtacacttagtacaattgtactttgtcaacgctcttcaaagaataagcatccaatgc-ttcaaatcc 17441869  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| || | ||||||||||||||||||||||| || |||||||| ||||||||| | ||||| ||||||| ||||||||||||| |    
T  17441868 tttcaaaatagtcgttgctttagtcttccagtcttctgcaatgcttagaggagattaagtccattgaacaacctttaaagctttaagtcttgcatctcct 17441769  T
Q  212 gatgaaatagagcttctagtgatcttcagcttc 244  Q
    |||||| |||||||||| |||||||||||||||    
T  17441768 gatgaactagagcttctggtgatcttcagcttc 17441736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 17797413 - 17797664
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||| || |||    
T  17797413 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaattcc 17797512  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| ||| |||||  ||||| ||||||||||||| |||| || ||||||||| ||||||||||| | | ||| | ||||| ||  ||||||||| |    
T  17797513 tttcaaactagccgttgcatcacttttccagtcttctgtaatggttagacgagattgaatccattgaacaacttttgaggctttaag--ttgcatctcct 17797610  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||  |  ||||||| ||||| ||||||||| ||||||||||||||||||||    
T  17797611 gatgagctgcagcttctggtgattttcagcttctgatgaacttgcttctgatga 17797664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 12 - 209
Target Start/End: Original strand, 16188975 - 16189172
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| | ||| |||||||||| |||||||||||||||||||||| |||||||||  |||||||||| ||| || |||||||||||||||| |||||     
T  16188975 agagacacatactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttagaagaataagcatccaatgccttcaaatca 16189074  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctc 209  Q
    || |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| || | ||||| ||||||| |||||||||||||    
T  16189075 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatggttggacgagattaaatccattaaacaacctttgaagctttaagtcttgcatctc 16189172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 33082872 - 33083073
Alignment:
Q  36 gtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcact 135  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||  || ||||||||||||||||||| |||||||| |||||||||||||| ||||||    
T  33082872 gtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcact 33082971  T
Q  136 cttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttctagtgatc 235  Q
    ||||   ||||||||||||||| ||||||||||||||||||||| | ||||| ||||||| ||||||||||||| ||||||| |  ||||||| ||||||    
T  33082972 cttctgatcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatc 33083071  T
Q  236 tt 237  Q
    ||    
T  33083072 tt 33083073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 24646329 - 24646581
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  |||| |||||  || || |||||||||||||||  ||||||    
T  24646329 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacactcttcaaagaataagcatccaatgcctgcaaatcc 24646428  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||  |||| | |||||||  |||||| |||||||||| |||||||||||||| |||||| | ||||| ||||||| | ||||||||||| |    
T  24646429 tttcaaaatagctgttgctacactcttttagtcttatgcaatgcttagacgagattaaatcaattgaacaacctttgaagctttaactcttgcatctctt 24646528  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |||||||||| ||||||||||||||| ||| ||  ||||||||||||    
T  24646529 gatgaactagagcttctggtgatcttcagcttctgat-aagatgcttctgatga 24646581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 26 - 250
Target Start/End: Original strand, 17914464 - 17914688
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||| |||||||| ||||||||||||| |||||||||  ||||||||||  || |||||||||| |||||||| |||||||| ||||||||| |    
T  17914464 agtagtggagatagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgccttcaaatcctttcaaaatagttg 17914563  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| ||||||||| |||||||||||||||||| ||||||||||||||||||||| | | ||| ||||||| | ||||||| ||| | ||||  || | ||    
T  17914564 ttgcttcactcttacagtcttctgcaatgcttagacgagattaaatccattgaacaacttttgaagctttaactcttgcaactcctaatgagctacaact 17914663  T
Q  226 tctagtgatcttcagcttcagatga 250  Q
    ||||||||||||||||||| |||||    
T  17914664 tctagtgatcttcagcttctgatga 17914688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 17525889 - 17525663
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| ||||||| || |||||||||||||||| ||||| |||||||||  ||||||||||  || |||||||||||||||| || ||||||    
T  17525889 agagacacaaactgagtagtgaagatagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 17525790  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatctca 210  Q
    || ||||||||| ||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| | || ||| ||| ||| |||||||||||||     
T  17525789 tttcaaaatagttgttgtttcactcttccagtcttctgcagtgcttagacgatattaaatccattgaacaaccttttgaagatttaagtcttgcatctcc 17525690  T
Q  211 tgatgaaatagagcttctagtgatctt 237  Q
    ||||||| || || |||| ||||||||    
T  17525689 tgatgaactacagtttctggtgatctt 17525663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 12 - 195
Target Start/End: Complemental strand, 30421589 - 30421405
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaa--acaagcatccaatgcctttaaat 109  Q
    ||||||||||||  |||||||||||||||||||||| |||||||||| | |||||||  ||||||||||||||||  |||||||||||||||||| ||||    
T  30421589 agagacaaaaacagagtagtggaggtagtggttgtaaacttcgtacaat-gtactttgtcaacgctctttgaaaagaacaagcatccaatgccttcaaat 30421491  T
Q  110 ccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagcttt 195  Q
    || | |||| ||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||    
T  30421490 ccattcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagcttt 30421405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 18679806 - 18680057
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||| ||| |||||||||||||||||||||| ||||||| |  ||||||||||  || |||||||||||||||| || ||||||    
T  18679806 agagacacaaactgagtagtagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 18679905  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    |  |||||||||||||| || |||| ||  ||||| |||||||||| ||||||||| |||||| ||||   ||||| ||||| | ||||||||||||  |    
T  18679906 tatcaaaatagtcgttgctttactcctctggtcttttgcaatgcttagacgagattgaatccactgaactacctttgaagctctaagtcttgcatcttct 18680005  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||||  ||||||||||||||||  ||||| ||||||||||||||||||||    
T  18680006 gatgaaatgaagcttctagtgatctt--gcttctgatgaacttgcttctgatga 18680057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 27 - 217
Target Start/End: Complemental strand, 23263757 - 23263566
Alignment:
Q  27 gtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgt 126  Q
    ||||||||||||||||||||||||||||||||  ||||||||  |||||||||||||| ||||| ||||||||||||| |||||||| |||||||||| |    
T  23263757 gtagtggaggtagtggttgtacacttcgtacaactgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaaatagtcat 23263658  T
Q  127 tgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagct-ttgagtcttgcatctcatgatgaa 217  Q
    ||||||||||||| ||||||||||| || || |||||||||||||| |||||| | ||||| ||| | || ||| ||||||||| |||||||    
T  23263657 tgtttcactcttctagtcttctgcattgtttagacgagattaaatctattgaacaacctttgaagttcttaagttttgcatctcctgatgaa 23263566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 12 - 243
Target Start/End: Original strand, 29693306 - 29693537
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| || ||||||||||||||||||| |||||||||  ||| ||||||  || ||||||||| |||||| || ||||||    
T  29693306 agagacacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaaagctcttcaaagaacaagcatacaatgctttcaaatcc 29693405  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| ||||||||| |||||||||||||||||| ||||||||||||| |||| || || ||||  |||||| ||||||||||||| |    
T  29693406 tttcaaaatagtggttgcttcactctttcagtcttctgcaatgcttagacgagattaaattcattaaacagtctttggagctttaagtcttgcatctcct 29693505  T
Q  212 gatgaaatagagcttctagtgatcttcagctt 243  Q
     ||||| || | ||| | ||||||||||||||    
T  29693506 aatgaactacaacttatggtgatcttcagctt 29693537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 14 - 265
Target Start/End: Complemental strand, 15336246 - 15335997
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcctt 113  Q
    ||||||||||  |||||||||||||||||||||||||||||||||   |||||||  |||||||||||||  || |||||||||||||||| ||||||||    
T  15336246 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctt 15336147  T
Q  114 ccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatga 213  Q
     |||||||||||||| |||||| |  ||||||||||||||  || |||||| || | |||||| || | | ||| ||||||| ||  ||||||||| |||    
T  15336146 tcaaaatagtcgttgcttcactttctcagtcttctgcaatctttagacgagtttgattccattaaacaacttttgaagctttaag--ttgcatctcctga 15336049  T
Q  214 tgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||| || ||||||| |||||  |||||||| ||| ||||||||||||||||    
T  15336048 tgaactacagcttctggtgattctcagcttctgataaacttgcttctgatga 15335997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 14 - 265
Target Start/End: Complemental strand, 15425311 - 15425062
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcctt 113  Q
    ||||||||||  |||||||||||||||||||||||||||||||||   |||||||  |||||||||||||  || |||||||||||||||| ||||||||    
T  15425311 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctt 15425212  T
Q  114 ccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatga 213  Q
     |||||||||||||| |||||| |  ||||||||||||||  || |||||| || | |||||| || | | ||| ||||||| ||  ||||||||| |||    
T  15425211 tcaaaatagtcgttgcttcactttctcagtcttctgcaatctttagacgagtttgattccattaaacaacttttgaagctttaag--ttgcatctcctga 15425114  T
Q  214 tgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||| || ||||||| |||||  |||||||| ||| ||||||||||||||||    
T  15425113 tgaactacagcttctggtgattctcagcttctgataaacttgcttctgatga 15425062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 14 - 265
Target Start/End: Complemental strand, 15516615 - 15516366
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcctt 113  Q
    ||||||||||  |||||||||||||||||||||||||||||||||   |||||||  |||||||||||||  || |||||||||||||||| ||||||||    
T  15516615 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctt 15516516  T
Q  114 ccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatga 213  Q
     |||||||||||||| |||||| |  ||||||||||||||  || |||||| || | |||||| || | | ||| ||||||| ||  ||||||||| |||    
T  15516515 tcaaaatagtcgttgcttcactttctcagtcttctgcaatctttagacgagtttgattccattaaacaacttttgaagctttaag--ttgcatctcctga 15516418  T
Q  214 tgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||| || ||||||| |||||  |||||||| ||| ||||||||||||||||    
T  15516417 tgaactacagcttctggtgattctcagcttctgataaacttgcttctgatga 15516366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 238
Target Start/End: Complemental strand, 18321319 - 18321093
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| || ||||||||||||||||||| |||||||||  |||||| |||  || ||||||||||||||||| | ||||||    
T  18321319 agagacacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaacaagcatccaatgccctcaaatcc 18321220  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||  |||||||  |||| |||||||||   ||||  |||||||||| ||||||||||||||||||||| | ||||| ||||||| ||||||||||||| |    
T  18321219 tttgaaaatagctgttgcttcactcttttggtctcatgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 18321120  T
Q  212 gatgaaatagagcttctagtgatcttc 238  Q
    |||||| |  ||||||| |||||||||    
T  18321119 gatgaacttcagcttctggtgatcttc 18321093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 24551265 - 24551516
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||   ||||| |   ||||||||||||| ||||||||||||||||||| |||||     
T  24551265 agagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaaacgtactatgttaacgctctttgaagaacaagcatccaatgccttcaaatct 24551364  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||| |||||||||||||||||  || |||||| || |||||||| || | | ||| |||| || ||  ||||||| |||    
T  24551365 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagacgaggttgaatccattaaacaacttttgaagccttaag--ttgcatcccat 24551462  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| ||||| ||  ||||| ||| ||||||||||| ||||    
T  24551463 gatgaactgcagcttctggtgatttttggcttctgataaacttgcttctaatga 24551516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 36105186 - 36105437
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  || |||||||||||||||||||||||| |||||   ||||| |  |||||||||||||| || || ||||||||||||| ||||||    
T  36105186 agagacaaaaacagagcagtggaggtagtggttgtacactttgtacaaacgtactatatcaacgctctttgaagaataaacatccaatgccttcaaatcc 36105285  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||||||||||| |||||||  ||| ||||| |||||||||||  || |||||| || ||||| || || ||| ||| ||||||| ||  ||||||||| |    
T  36105286 ttccaaaatagccgttgttatacttttccaatcttctgcaatctttagacgagtttgaatccgttaaacagcttttgaagctttaag--ttgcatctcct 36105383  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || ||||||| ||||| ||||||||| ||| ||||||||||||||||    
T  36105384 gatgaactatagcttctggtgattttcagcttctgataaacttgcttctgatga 36105437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 12 - 244
Target Start/End: Original strand, 17701736 - 17701968
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||||||||||||||| |||||||||| || |||||| |||||||||||  |  ||  ||||||||||||||| ||||||    
T  17701736 agagacacaaactgagtagtggaggtagtggttgtaaacttcgtacaattatactttgccaacgctcttaaaggaattagcatccaatgccttcaaatcc 17701835  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| ||||||||||   ||||||||||||||| ||||||||||||| ||||||| | ||||| ||||||| |||||  |||||  |    
T  17701836 tttcaaaatagttgttgcttcactcttctgatcttctgcaatgcttagacgagattaaattcattgaacaacctttgaagctttaagtctctcatcttct 17701935  T
Q  212 gatgaaatagagcttctagtgatcttcagcttc 244  Q
    |||||| |  ||||||| |||||| || |||||    
T  17701936 gatgaacttcagcttctggtgatcatctgcttc 17701968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 18718992 - 18719217
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||| |  ||||||||||  || |||||||||||||||| || ||||||    
T  18718992 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgacaacgctcttcaaagaacaagcatccaatgctttcaaatcc 18719091  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    |  |||||||||||||| ||||||| ||  ||||| ||||||||||  |||||||| |||||| |||| ||||||| ||||| | ||||||||||||  |    
T  18719092 tatcaaaatagtcgttgcttcactcctctggtcttttgcaatgcttgaacgagattgaatccactgaacagcctttgaagctctaagtcttgcatcttct 18719191  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    || ||| |  ||||||| ||||||||    
T  18719192 gaagaacttaagcttctggtgatctt 18719217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 1237628 - 1237879
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    |||||||| |||  ||||||||||||||||||||||||||||| |||   |||||||  |||||||||||||| |||||  |||||||||||| ||||||    
T  1237628 agagacaacaacagagtagtggaggtagtggttgtacacttcgcacaaaagtactttgtcaacgctctttgaagaacaaatatccaatgccttcaaatcc 1237727  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||| |||| ||||||||||||  || |||||| || |||||||| || ||| ||| |||| || ||  ||||||| |||    
T  1237728 tttcaaaatagtcgttgcttcacttttccggtcttctgcaatctttagacgaggttgaatccattaaacagcttttgaagccttaag--ttgcatcccat 1237825  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| || || ||  ||||| ||| ||||||||||||||||    
T  1237826 gatgaattgcagcttctggtaatttttggcttctgataaacttgcttctgatga 1237879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 17267465 - 17267689
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||| ||||||| |  ||| ||||||  || |||||||||| ||||| || ||||||    
T  17267465 agagacaaaaactgagtagtggagatagtggttgtacaattcgtacaattgtactatgtcaatgctcttcaaagaacaagcatctaatgctttcaaatcc 17267564  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||  |||| ||||||| | | ||||| |||||||||| ||||||||| || |||||||| | ||||| ||||||| ||||||||||||| |    
T  17267565 tttcaaaatagctgttgcttcactcctgcggtcttttgcaatgcttggacgagattgaa-ccattgaacaacctttgaagctttaagtcttgcatctctt 17267663  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    |||||| |  ||||||| ||||||||    
T  17267664 gatgaacttcagcttctggtgatctt 17267689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 20382554 - 20382329
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| | |||||||| |||||||||||||||||||||| ||||||| |  ||||||||||  || ||||| |||||| | | || ||||||    
T  20382554 agagacacaaactgattagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaaacatccactactttcaaatcc 20382455  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || || ||||| ||||| ||||||| || |||||| |||||||| | ||||||||| ||||||||||| ||||||| ||||||| || |||||||||| |    
T  20382454 tttcagaatagccgttgcttcactcctctagtcttttgcaatgcatggacgagattgaatccattgaacagcctttgaagctttaagacttgcatctcct 20382355  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    |||||| |  ||||||| ||||||||    
T  20382354 gatgaacttcagcttctggtgatctt 20382329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 86 - 213
Target Start/End: Complemental strand, 20255651 - 20255524
Alignment:
Q  86 aacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcct 185  Q
    ||||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||    
T  20255651 aacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgtaatgcttagacgagattaaatccattgaacagcct 20255552  T
Q  186 ttcaagctttgagtcttgcatctcatga 213  Q
    || | ||||| |||||||||||| ||||    
T  20255551 ttgacgctttaagtcttgcatctaatga 20255524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 40845547 - 40845297
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||| | ||||| |  |||||||||||||| || ||||||||||||||||  |||||    
T  40845547 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaatcgtactatgtcaacgctctttgaagaataagcatccaatgccttccaatcc 40845448  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||||||||||||||||| |  ||| |||||||||||||||||  || |||||| || ||||| || || | | ||| ||||||| ||   |||||||| |    
T  40845447 ttccaaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcc-ttaaacaacttttgaagctttaag--ctgcatctcct 40845351  T
Q  212 gatgaaatagagcttctagtga-tcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || ||||||| |||| |||| |||||| ||| ||||||||||||||||    
T  40845350 gatgaactatagcttctggtgagtctt-agcttctgataaacttgcttctgatga 40845297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 45538599 - 45538348
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||   ||  |||  |||||||||||||| ||||||||||||||| ||| ||||||    
T  45538599 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtgatttgtcaacgctctttgaagaacaagcatccaatgtcttcaaatcc 45538500  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| |||||| |||||||||||||||||  || |||||| || |||||||| || | | ||| |||| || ||  ||||||| |||    
T  45538499 tttcaaaatagttgttgcttcacttttccagtcttctgcaatctttagacgaggttgaatccattaaacaacttttgaagccttaag--ttgcatcccat 45538402  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| ||||| ||  ||||  ||| |||| |||||||||||    
T  45538401 gatgaactgcagcttctggtgatttttggcttatgataaactcgcttctgatga 45538348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 130 - 250
Target Start/End: Original strand, 22745596 - 22745716
Alignment:
Q  130 ttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttcta 229  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||| | ||||| ||||||| ||||||||||||| ||||||| ||||||||||     
T  22745596 ttcacacttccagtcttctacaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactagagcttctg 22745695  T
Q  230 gtgatcttcagcttcagatga 250  Q
    ||||||||||||||| |||||    
T  22745696 gtgatcttcagcttctgatga 22745716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 22673769 - 22674020
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || |||||||||||| |||  |||||    
T  22673769 agagacaaaaacaaagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgtcttctaatcc 22673868  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    |||||||||||  |||| |  ||| ||| |||||||||||||     |||||| || ||||| || || | | ||| ||||||| ||  |||||||||      
T  22673869 ttccaaaatagatgttgctatacttttctagtcttctgcaatctccagacgagtttgaatccgttaaacaacttttgaagctttaag--ttgcatctccg 22673966  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || | ||||| ||||||||||||||| ||| ||||||||||||||||    
T  22673967 gatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 22674020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 265
Target Start/End: Original strand, 9320573 - 9320812
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctcttt-gaaaaacaagcatccaatgcctttaaatccttccaaaatagtc 124  Q
    |||||||||||||||||||||||||||||||||  | ||||||  ||||||||||| ||| || ||||||||||||| || |||||||| ||||||| |     
T  9320573 agtagtggaggtagtggttgtacacttcgtacaaatatactttgtcaacgctcttttgaagaataagcatccaatgcgttcaaatcctttcaaaataatt 9320672  T
Q  125 gttgtttcactcttccagtcttctgcaatgctttgacgagattaaatcc-attgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagag 223  Q
    |||| |||||| |||||||||||||||||  || |||||| || ||||| ||| || ||| ||| |||| || ||  |||||||   ||||||| |  ||    
T  9320673 gttgcttcacttttccagtcttctgcaatctttagacgaggttgaatccaattaaacagcttttgaagccttaag--ttgcatcctctgatgaactgcag 9320770  T
Q  224 cttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||| ||||| || |||||| ||| ||||||||||||||||    
T  9320771 cttctggtgatttttagcttctgataaacttgcttctgatga 9320812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 22663107 - 22663358
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    |||||||||||   |||||||||| || |||||||||||||||||||   ||||| |  |||||||||||||| || |||||||||||| |||  ||||     
T  22663107 agagacaaaaatagagtagtggagatattggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgtcttctaatct 22663206  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    |||||||||||| |||| |  | | |||||||||||||||||  |  |||||| || ||||| || || ||| ||| ||||||| |||  |||||||| |    
T  22663207 ttccaaaatagttgttgctatatttttccagtcttctgcaatcttcagacgagtttgaatccgttaaacagcttttgaagctttaagt--tgcatctcct 22663304  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
     ||||| || | |||||||||||||||||||||  || ||||||||||||||||    
T  22663305 aatgaactacaacttctagtgatcttcagcttctaataaacttgcttctgatga 22663358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 156
Target Start/End: Complemental strand, 18722792 - 18722661
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||  ||||| ||||||| |||||||| |||| ||| |||||||||||    
T  18722792 agtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgccttcaaattctttcaaaatagtcg 18722693  T
Q  126 ttgtttcactcttccagtcttc-tgcaatgct 156  Q
    ||| ||||||||||  |||||| |||||||||    
T  18722692 ttgcttcactcttcttgtcttcttgcaatgct 18722661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 156
Target Start/End: Complemental strand, 18731137 - 18731006
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||  ||||| ||||||| |||||||| |||| ||| |||||||||||    
T  18731137 agtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgccttcaaattctttcaaaatagtcg 18731038  T
Q  126 ttgtttcactcttccagtcttc-tgcaatgct 156  Q
    ||| ||||||||||  |||||| |||||||||    
T  18731037 ttgcttcactcttcttgtcttcttgcaatgct 18731006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 156
Target Start/End: Complemental strand, 18685543 - 18685412
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||  ||||| ||||||| |||||||| |||| ||| ||||||||| |    
T  18685543 agtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgccttcaaattctttcaaaatagttg 18685444  T
Q  126 ttgtttcactcttccagtcttc-tgcaatgct 156  Q
    ||| ||||||||||  |||||| |||||||||    
T  18685443 ttgcttcactcttctggtcttcttgcaatgct 18685412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 43644887 - 43645071
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||||| |||||||||   |||||||||  || ||||||||||||||||||| |||| |    
T  43644887 agagacacaaaccgagtagtggaggtagtggttgtacacttcgtacaattgtactttattaacgctcttcaaagaacaagcatccaatgccttcaaattc 43644986  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttga 197  Q
     |   || ||| ||||  ||||||||||  |||||||||||||| | | || |||||||||  ||||| | ||||| |||||||||    
T  43644987 atttgaattagccgtttcttcactcttctggtcttctgcaatgc-taggcgtgattaaatcatttgaacaacctttgaagctttga 43645071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 6407717 - 6407958
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| |||||||||||||||||||| |   ||||| |  |||||||||||||| ||  |||||||||||         ||    
T  6407717 agagacaaaaacagagtagtggagatagtggttgtacacttcgtagaaacgtactatgtcaacgctctttgaagaattagcatccaatg---------cc 6407807  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||||||||||| ||||||   ||| ||||||||||||||||| ||| |||||| || ||||| || || ||| ||| ||||||| ||  ||||||||| |    
T  6407808 ttccaaaatagccgttgtaatacttttccagtcttctgcaat-cttagacgagtttgaatcctttaaacagcttttgaagctttaag--ttgcatctcct 6407904  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| |||||   || |||| ||||||||||||| ||||||    
T  6407905 gatgaactgcagcttctggtgattcacaacttctgatgaacttgcttttgatga 6407958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 14989611 - 14989369
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| ||||||||||||| ||||||||   ||||| |  |||||||||||||| || ||||||||||||         ||    
T  14989611 agagacaaaaacagagtagtggagatagtggttgtacaattcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatg---------cc 14989521  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||||||| ||| |||||||  ||| ||||| ||||| |||||  |  |||||| || ||||| || ||  || ||| ||||||| ||  ||||||||| |    
T  14989520 ttccaaattagccgttgttatacttttccaatcttcagcaatcttcagacgagtttgaatcctttaaacggcttttgaagctttaag--ttgcatctcct 14989423  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| |||||   ||||||| ||||||||||||||||||||    
T  14989422 gatgaattgcagcttctggtgattcacagcttctgatgaacttgcttctgatga 14989369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 19707497 - 19707639
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| ||||| ||| ||||||||||||||||||||||| |||||||||  ||||| ||||  || ||||| ||| ||||||||| |||| |    
T  19707497 agagacacaaactgagtagaggatgtagtggttgtacacttcgtacaattgtactttgtcaacgttcttcaaagaacaaccattcaatgccttcaaattc 19707596  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatg 154  Q
     |   || ||| ||||| ||||||||||  |||||||||||||    
T  19707597 atttgaattagccgttgcttcactcttctggtcttctgcaatg 19707639  T

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Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 265
Target Start/End: Complemental strand, 24833203 - 24832965
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctc-tttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtc 124  Q
    |||| ||||||||||||||||||||||||||||   ||||  |  |||||||| |||||  |||||||||||||||| || |||||| | |||| ||| |    
T  24833203 agtaatggaggtagtggttgtacacttcgtacaaacgtaccatgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcccttcaaagtagcc 24833104  T
Q  125 gttgtttcactcttccagtcttctgcaatgctttgacgagattaaat-ccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagag 223  Q
     ||| |||||| || |||||||||||||| ||| |||||| || ||| ||||| || ||| ||| |||| || ||  |||||||   ||||||| |  ||    
T  24833103 attgcttcact-tttcagtcttctgcaatccttagacgaggttgaatcccattaaacagcttttgaagccttaag--ttgcatcctctgatgaactgcag 24833007  T
Q  224 cttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||| ||||| || ||||||  || ||||||||||||||||    
T  24833006 cttctggtgatttttagcttctaataaacttgcttctgatga 24832965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 128
Target Start/End: Complemental strand, 45568047 - 45567945
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    ||||||| |||||||||| ||||||||||||||   |||||||  ||||||||||||||  | || ||||||||||||| |||||||| |||| ||| ||    
T  45568047 agtagtgaaggtagtggtcgtacacttcgtacagaagtactttgtcaacgctctttgaaggataatcatccaatgccttcaaatcctttcaaattagccg 45567948  T
Q  126 ttg 128  Q
    |||    
T  45567947 ttg 45567945  T

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Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 18151806 - 18151674
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| ||||||||||||| ||||||||   ||||| |  ||| |||||||||| || ||||||||||||         ||    
T  18151806 agagacaaaaacagagtagtggagatagtggttgtacaattcgtacaaacgtactatgtcaatgctctttgaagaataagcatccaatg---------cc 18151716  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaat 153  Q
    ||||||| |||||||||||  ||| |||||||||||||||||    
T  18151715 ttccaaattagtcgttgttatacttttccagtcttctgcaat 18151674  T

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Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 19956482 - 19956374
Alignment:
Q  31 tggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtt 130  Q
    ||||||||||||||||||| || ||||| |||| ||||| ||||||||||  |  || ||| |||||||||||| ||||||||   || ||||||||| |    
T  19956482 tggaggtagtggttgtacaattagtacaattgtcctttttcaacgctcttcaatgaaaaagtatccaatgccttcaaatcctttagaattagtcgttgct 19956383  T
Q  131 tcactcttc 139  Q
    |||||||||    
T  19956382 tcactcttc 19956374  T

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Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 154
Target Start/End: Complemental strand, 22461783 - 22461656
Alignment:
Q  27 gtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgt 126  Q
    ||||||||| |||||||||| |||| |||||| |||| ||||| |||| ||||   |  || |||||||||||||||| |||||| |   || |||||||    
T  22461783 gtagtggagatagtggttgtgcactccgtacaattgtcctttttcaactctctccaacgaataagcatccaatgccttcaaatccatttgaattagtcgt 22461684  T
Q  127 tgtttcactcttccagtcttctgcaatg 154  Q
    || |||| ||||| ||||||||||||||    
T  22461683 tgcttcattcttctagtcttctgcaatg 22461656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 13430785 - 13430699
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    |||||||||  ||||||||| |||||||||||||||||||||||   ||||| |  |||| ||||||||| || |||||||||||||    
T  13430785 gacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgc 13430699  T

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Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 25164061 - 25164115
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtact 66  Q
    ||||||| ||| | |||||||||| |||||||||||||||||||||| |||||||    
T  25164061 agagacacaaattgagtagtggagatagtggttgtacacttcgtacaattgtact 25164115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 3843730 - 3843768
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  3843730 agacaaaaacagagtagtggaggtagtggttgtacactt 3843768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 21288394 - 21288440
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtaca 58  Q
    |||||||||  | |||||||||| |||||||||||||||||||||||    
T  21288394 agagacaaactcaaagtagtggaagtagtggttgtacacttcgtaca 21288440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 23370756 - 23370794
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  23370756 agacaaaaacagagtagtggaggtagtggttgtacactt 23370794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 1750302 - 1750339
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  1750302 gacaaaaacagagtagtggaggtagtggttgtacactt 1750339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 6318588 - 6318551
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  6318588 gacaaaaacagagtagtggaggtagtggttgtacactt 6318551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 18153943 - 18153980
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  18153943 gacaaaaacagagtagtggaggtagtggttgtacactt 18153980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 18158463 - 18158500
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  18158463 gacaaaaacagagtagtggaggtagtggttgtacactt 18158500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 18769209 - 18769172
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  18769209 gacaaaaacagagtagtggaggtagtggttgtacactt 18769172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 31215224 - 31215261
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  31215224 gacaaaaacagagtagtggaggtagtggttgtacactt 31215261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 3598319 - 3598255
Alignment:
Q  201 ttgcatctcatgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||||| ||||||| || | ||||| |||||  |||||||| ||||||||||||| ||||||    
T  3598319 ttgcatctcctgatgaactacaacttctggtgattctcagcttctgatgaacttgcttatgatga 3598255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 170; Significance: 3e-91; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 28582104 - 28582357
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||  |||||||||||||| ||||||||||||||||| ||||||||    
T  28582104 agagacaaaaactgagtagtggaggtagtggttgtacacttcgtacaattgtattttgtcaacgctctttgaagaacaagcatccaatgccattaaatcc 28582203  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||||||||| ||||||||||||| | ||||||||||||||||||||| ||||||| ||||||| ||||||||||||| |    
T  28582204 tttcaaaatagtcgttgcttcactcttccaatcttctgcaatgcatagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatctcct 28582303  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||||||||||||| ||||| |||||||||  ||| |||||||||||||||    
T  28582304 gatgaaatagagcttctggtgattttcagcttctaatgtacttgcttctgatga 28582357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 12 - 269
Target Start/End: Original strand, 2561186 - 2561443
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||| ||||||||||||||  ||| ||||||    
T  2561186 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacacttgtactttgtcaacgatctttgaagaacaagcatccaatttcttcaaatcc 2561285  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||||| ||||||||||||| |    
T  2561286 tttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 2561385  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatgatgtc 269  Q
    |||||| |||||||||| |||||  |||||||| ||||||||||||||||||||||||    
T  2561386 gatgaactagagcttctggtgattctcagcttctgatgaacttgcttctgatgatgtc 2561443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 18121783 - 18121530
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||| ||  ||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||| || |||||| ||||||||||||||||    
T  18121783 agagacaaacacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtaaacgctctttgaagaaaaagcattcaatgcctttaaatcc 18121684  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| |||||||||||||||||||||||||||   |||||||| ||||||||||| | ||||| ||||||| | ||||||||||| |    
T  18121683 tttcaaaatagttgttgcttcactcttccagtcttctgcaatgctcaaacgagattgaatccattgaacaacctttgaagctttaaatcttgcatctcct 18121584  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |||||||||| |||||||| |||||  ||||||||||||| ||||||    
T  18121583 gatgaactagagcttctggtgatctttagcttatgatgaacttgcttttgatga 18121530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 12 - 244
Target Start/End: Complemental strand, 49642923 - 49642691
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||| ||||| |||||||||  ||||||||||  || ||||| ||||||||||||| ||||||    
T  49642923 agagacacaaactgagtagtggagatagtggttgtacactttgtacaattgtactttgtcaacgctcttaaaagaacaatcatccaatgccttcaaatcc 49642824  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||| | ||||| ||||||| ||||||||||||| |    
T  49642823 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatctattgaacaacctttgaagctttaagtcttgcatctcct 49642724  T
Q  212 gatgaaatagagcttctagtgatcttcagcttc 244  Q
    |||||| || | ||||| |||||||||||||||    
T  49642723 gatgaactacaacttctggtgatcttcagcttc 49642691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 18142913 - 18142697
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||| ||  ||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||| || |||||| ||||||||||||||||    
T  18142913 agagacaaacacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtaaacgctctttgaagaaaaagcattcaatgcctttaaatcc 18142814  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| |||||||||||||||||||||||||||   |||||||| ||||||||||||||||||| ||||||| | ||||||||||| |    
T  18142813 tttcaaaatagttgttgcttcactcttccagtcttctgcaatgctcaaacgagattgaatccattgaatagcctttgaagctttaaatcttgcatctcct 18142714  T
Q  212 gatgaaatagagcttct 228  Q
    |||||| ||||||||||    
T  18142713 gatgaactagagcttct 18142697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 14393165 - 14392940
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  || |||||||||||||||| || ||||||    
T  14393165 agagacacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 14393066  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||| | ||||| || |||| ||||||| ||||| |    
T  14393065 tttcaaaatagtcgttgtttcactcttctggtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaaactttaagtcttgtatctcct 14392966  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
     ||||| |  ||||||||||||||||    
T  14392965 aatgaacttcagcttctagtgatctt 14392940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 28 - 265
Target Start/End: Original strand, 14969341 - 14969578
Alignment:
Q  28 tagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgtt 127  Q
    |||||||| |||||||||||||||||||| |  ||||||||  ||||||| |||||| || |||||||||||||| | |||||||| ||||||||| |||    
T  14969341 tagtggagatagtggttgtacacttcgtaaaaatgtactttgtcaacgctatttgaagaataagcatccaatgccatcaaatcctttcaaaatagttgtt 14969440  T
Q  128 gtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttc 227  Q
    | || ||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||||| |||||||||| || | ||||| |||||||||    
T  14969441 gctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatatcctcatgaactagagcttc 14969540  T
Q  228 tagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    | |||||||||||| || ||||||||||||| ||||||    
T  14969541 tggtgatcttcagcatctgatgaacttgcttatgatga 14969578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 26 - 250
Target Start/End: Complemental strand, 38177790 - 38177566
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    ||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| || ||||||||||||||||||| |||||||| ||||||||| |    
T  38177790 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttaaagaacaagcatccaatgccttcaaatcctttcaaaatagttg 38177691  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| |||||||||||| ||||||||| ||||  ||||||||||||| ||||||| | ||||| ||||||| ||||||||||||| | || || |||||||    
T  38177690 ttgcttcactcttccaatcttctgcattgctcagacgagattaaattcattgaacaacctttgaagctttaagtcttgcatctcctaataaactagagct 38177591  T
Q  226 tctagtgatcttcagcttcagatga 250  Q
    |||  |||||||| ||||| |||||    
T  38177590 tctgatgatcttctgcttctgatga 38177566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 265
Target Start/End: Original strand, 47207706 - 47207958
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcctt 113  Q
    ||||||||||  ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||| ||||| ||    
T  47207706 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcatt 47207805  T
Q  114 ccaaaatagtcgttgtttcactcttccagtcttctgcaatgcttt-gacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatg 212  Q
     |||| ||| ||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||| |||   | ||||||||| ||    
T  47207806 tcaaactagccgttgcttcacttttccagtcttctgcaatgctttagacgagattaaatccattgaacaacctttgaagtttt--atgttgcatctcctg 47207903  T
Q  213 atgaaatagagcttctagtgatcttcagcttcagatgaactt--gcttctgatga 265  Q
    ||||| |  ||||||| ||||| ||||||||| |||||| ||  |||||||||||    
T  47207904 atgaactgcagcttctggtgattttcagcttctgatgaagttcagcttctgatga 47207958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 20646152 - 20646391
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| |  ||||||||||  || |||||||||||||||| || ||||||    
T  20646152 agagacacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 20646251  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatctca 210  Q
    || |||||||| ||||| ||||||||||  ||||||| |||||||| |||||||| |||| ||||||| |||| ||| ||||||| |||||||||||||     
T  20646252 tttcaaaatagacgttgcttcactcttctggtcttctacaatgcttggacgagatgaaatacattgaacagccttttaaagctttaagtcttgcatctcc 20646351  T
Q  211 tgatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    ||||||| || | ||||| ||||||||||||||| |||||    
T  20646352 tgatgaactacaacttctggtgatcttcagcttctgatga 20646391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 40799872 - 40800108
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| |||||| ||||||| |||| |||| |    
T  40799872 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagtatccaattccttcaaatac 40799971  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| ||||||||| ||| || ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||   |  |||||||| |    
T  40799972 tttcaaactagtcgttgcttcgcttttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagcttt--atgatgcatctctt 40800069  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |  ||||||| ||||| ||||||||| |||||    
T  40800070 gatgaactgcagcttctggtgattttcagcttctgatga 40800108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 47405582 - 47405346
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||  |||| ||||||||| ||||| |||| |||||||| ||||||    
T  47405582 agagacaaaaacatagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacactctttgaagaacaaacatcaaatgccttcaaatcc 47405483  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| |||| |||| |||| | ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||   | ||||||||| |    
T  47405482 tttcaaactagttgttgcttcatttttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagcttt--atgttgcatctcgt 47405385  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |  ||||||| ||||| ||||||||| |||||    
T  47405384 gatgaactgcagcttctggtgattttcagcttctgatga 47405346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 6090730 - 6090968
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||  ||| ||| ||| || ||||||||| ||||||||| ||||||    
T  6090730 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaaagctttttaaagaacaagcattcaatgccttcaaatcc 6090829  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| |||  |||| |||||||||| ||||||||||||||||| ||||||||||||||||||||  | ||||| ||| ||| ||||||||||||| |    
T  6090830 tttcaaattagatgttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattgagcaacctttgaagttttaagtcttgcatctcct 6090929  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |  ||||||| ||||||||| ||||| |||||    
T  6090930 gatgaacttcagcttctggtgatcttctgcttctgatga 6090968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 13948334 - 13948572
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| || || |||| ||||| || ||||||||||||||||||| ||||||| |  ||||||||||  || ||||||||||||||||||| ||||||    
T  13948334 agagacacaacctgagtaatggagataatggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 13948433  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||| |||||| | ||||| | ||||| ||||||||||||| |    
T  13948434 tttcaaaatagtcgttgcttcactattccagtcttctgcaatgcttagacgagattaaatcaattgaacatcctttgacgctttaagtcttgcatctcct 13948533  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||  |  ||||||| ||||||||||||||| |||||    
T  13948534 gatgagctttagcttctggtgatcttcagcttctgatga 13948572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 194
Target Start/End: Original strand, 41495005 - 41495179
Alignment:
Q  20 aaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaa 119  Q
    ||||| |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  || ||||||||||||||||||| |||||||| |||||    
T  41495005 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 41495104  T
Q  120 tagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctt 194  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||||||    
T  41495105 tagtcgttgcttcactcttccagtcttctgcaatgtttagacgagattaaatccattgaacagcctttgaagctt 41495179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 37467331 - 37467556
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| |||||  ||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  || ||||||||||||||||||| ||||||    
T  37467331 agagacacaaactgggtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 37467430  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| ||||||||||||||||||| |||||||| || |||||||||||||||||| |  |||| ||| ||| ||| ||||||||| |    
T  37467431 tttcaaaatagtcgttgcttcactcttccagtcttctacaatgcttagatgagattaaatccattgaacaagctttgaagatttaagttttgcatctcct 37467530  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    |||||| ||  |||||| ||||||||    
T  37467531 gatgaactactgcttctggtgatctt 37467556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 31303384 - 31303622
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||| ||||||||||||||||| |||||||||  ||||||||||  || ||||| |||| |||| ||| ||||||    
T  31303384 agagacacaaactgagtagtggagatagttgttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaaacatcaaatgtcttcaaatcc 31303483  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||  ||||||||| |||||||||||||||||| ||||||||||||| ||||||| | ||||| ||||||| |||||| |||||| |    
T  31303484 tttcaaaatagttgttccttcactctttcagtcttctgcaatgcttagacgagattaaattcattgaacaacctttaaagctttaagtctttcatctcct 31303583  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    ||  || |||||||||| ||||||||||||||| |||||    
T  31303584 gagtaactagagcttctggtgatcttcagcttctgatga 31303622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 15903196 - 15903435
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaa-gcatccaatgcctttaaatc 110  Q
    ||||||| ||||| |||||||||| |||| ||||||||||||||||| |||||||||  ||| ||||||  || ||||| |||| |||||| || |||||    
T  15903196 agagacacaaactgagtagtggagatagttgttgtacacttcgtacaattgtactttgtcaatgctcttcaaagaacaaagcatgcaatgctttcaaatc 15903295  T
Q  111 cttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctca 210  Q
    ||| |||||||||||||| |||||||||| ||||||||| ||||||| ||||||||| ||||||||||| ||| ||| ||||||| |||||||||||||     
T  15903296 ctttcaaaatagtcgttgcttcactcttctagtcttctgtaatgcttagacgagattgaatccattgaacagcgtttgaagctttaagtcttgcatctcc 15903395  T
Q  211 tgatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||| || || ||||| | ||||||||||||||| |||||    
T  15903396 tgataaattacagcttttggtgatcttcagcttctgatga 15903435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 12963246 - 12962995
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| | ||| |||||||||| |||||||||||||||||||||| ||||||| |  |||| |||||  || |||||||||||||||| || ||| ||    
T  12963246 agagacacatactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacactcttcaaagaacaagcatccaatgctttcaaaacc 12963147  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||| |||||||| |||| |||||||| ||||||||||||| ||||| ||| ||||||||||| ||||| | || || ||||||| ||||||||||||| |    
T  12963146 ttctaaaatagttgttgcttcactctcccagtcttctgcattgcttagacaagattaaatcccttgaacaacccttgaagctttaagtcttgcatctcct 12963047  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || | ||||| ||||||||  ||||| ||||||||||||||||||||    
T  12963046 gatgaactacaacttctggtgatctt--gcttctgatgaacttgcttctgatga 12962995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 12726391 - 12726186
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| |||||||||   ||| |||||| || |  ||||||||||||| || ||||||    
T  12726391 agagacaaaaacagagtagtggaggtagtggttgtacactttgtacaattgtactttgttaactctctttaaagagtaagcatccaatgctttcaaatcc 12726292  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||  |||||||||| |||||||||||| |||| ||||||||| ||||||||||||||||||| ||||||| ||||||| ||||| |    
T  12726291 tttcaaaatagtcgttacttcactcttctagtcttctgcaaagcttagacgagattgaatccattgaatagcctttgaagctttaagtcttgaatctcct 12726192  T
Q  212 gatgaa 217  Q
    ||||||    
T  12726191 gatgaa 12726186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 20 - 209
Target Start/End: Complemental strand, 17239075 - 17238886
Alignment:
Q  20 aaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaa 119  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||  ||||||| ||  || ||||| |||||||||| || |||||||| |||||    
T  17239075 aaactaagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctattcaaagaacaatcatccaatgctttcaaatcctttcaaaa 17238976  T
Q  120 tagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctc 209  Q
    |||||| || ||||||||||  |||||||||||||||| ||||||||||||||||||||  ||||||| ||||||| |||||||||||||    
T  17238975 tagtcgatgcttcactcttctggtcttctgcaatgcttagacgagattaaatccattgatcagcctttgaagctttaagtcttgcatctc 17238886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 13780745 - 13780578
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| ||| |||||| |||||||||||||||||||||| |||||||||  ||||||||||  || ||||||||||||||||||| ||||||    
T  13780745 agagacacaaactgagtcgtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaataacaagcatccaatgccttcaaatcc 13780646  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaa 179  Q
    || |||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| |||||||    
T  13780645 tttcaaaatagtcgttgcttcactctttcagtcttctgcaatgcttagacgagattaaattcattgaa 13780578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 52920404 - 52920641
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||   ||||| ||||||||||||||| |||||||||| || || |||  ||||||||||| || |||||||||| |||||||| |||| |    
T  52920404 agagacaaaaacagggtagtagaggtagtggttgtatacttcgtacaattttaatttgtcaacgctctttaaagaacaagcatcaaatgccttcaaatac 52920503  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||  ||| |||| |||| |||||||||| ||||||||||||||||| ||||||||||||||||||||  ||||||| || |||| ||||||||||||| |    
T  52920504 ttt-aaattagttgttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattgagcagcctttgaaactttaagtcttgcatctcct 52920602  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |  ||||||| ||||||||||||||| |||||    
T  52920603 gatgaacttcagcttctggtgatcttcagcttctgatga 52920641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 36 - 213
Target Start/End: Original strand, 13824091 - 13824268
Alignment:
Q  36 gtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcact 135  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||||| ||||| ||||||||||||| ||||| || ||||||||| |||| ||||||    
T  13824091 gtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcatttcaaaatagttgttgcttcact 13824190  T
Q  136 cttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatga 213  Q
    ||||||||||||| || || || ||||||||||||||||||||| | ||||| ||||||| |||||||||||| ||||    
T  13824191 cttccagtcttcttcattgtttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctaatga 13824268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 49553650 - 49553445
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    |||||||||||   ||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||| ||||| ||||||||||||| ||||||    
T  49553650 agagacaaaaatagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctctgaagaacaaacatccaatgccttcaaatcc 49553551  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||||  || ||||||||| || ||||||||||||||| |||||  ||||||| ||| || ||||||| || |||| ||||||||||||| |    
T  49553550 tttcaaaatagtcactgcttcactctttcaatcttctgcaatgcttagacgatgttaaatctattaaacagcctttgaaactttaagtcttgcatctcct 49553451  T
Q  212 gatgaa 217  Q
    ||||||    
T  49553450 gatgaa 49553445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 16658779 - 16658541
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||| | |  ||||||||||  || || ||||||||||||| || ||||||    
T  16658779 agagacacaaactaagtagtggaggtagtggttgtacacttcgtacaattgtattatgtcaacgctcttcaaagaataagcatccaatgctttcaaatcc 16658680  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| ||||||  ||  ||||| || ||||||| ||||||||| |||| |||||| | ||||| ||| ||  ||||||||||||| |    
T  16658679 tttcaaaatagtcgttgcttcactgctctggtcttttgtaatgcttggacgagattgaatcaattgaacaacctttgaagtttcaagtcttgcatctcct 16658580  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| || | ||||| ||||||||||||||| |||||    
T  16658579 gatgaactacaacttctggtgatcttcagcttctgatga 16658541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 30 - 269
Target Start/End: Complemental strand, 19889088 - 19888850
Alignment:
Q  30 gtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgt 129  Q
    |||||| |||||||||||||||||||||| ||||| | |  |||  || ||  || |||||||||||||||| || |||||||| ||||||||||||||     
T  19889088 gtggagatagtggttgtacacttcgtacaattgtaatatgtcaatcctattcaaagaacaagcatccaatgctttcaaatcctttcaaaatagtcgttgc 19888989  T
Q  130 ttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatag-cctttcaagctttgagtcttgcatctcatgatgaaatagagcttct 228  Q
    ||||||| ||  ||||| |||||||||| ||||||||| ||||||||||| || | ||| ||||||| ||||||||||||| ||||||| |  |||||||    
T  19888988 ttcactcatctggtcttttgcaatgcttggacgagattgaatccattgaacagtctttttaagctttaagtcttgcatctcttgatgaactttagcttct 19888889  T
Q  229 agtgatcttcagcttcagatgaacttgcttctgatgatgtc 269  Q
    |||||||||  ||||| ||||||||||||||||||||||||    
T  19888888 agtgatctt--gcttctgatgaacttgcttctgatgatgtc 19888850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 26 - 265
Target Start/End: Original strand, 11223575 - 11223812
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||| ||||||||||||||||||||||    ||||||  |||||||||||||| ||||||||||||||||||| |||||||| |||||||||||    
T  11223575 agtagtggagatagtggttgtacacttcgtacaaacatactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcg 11223674  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| |||||| || |||||||||||||||| | ||||||||| || |||||||| ||| ||| |||||   ||  ||| ||||| ||||||| |   |||    
T  11223675 ttgcttcactttttcagtcttctgcaatgcatagacgagattgaacccattgaacagcttttgaagctcaaag--ttgtatctcctgatgaactgctgct 11223772  T
Q  226 tctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||| ||||| ||||| ||| ||||||||||||||||||||    
T  11223773 tctggtgattttcagattctgatgaacttgcttctgatga 11223812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 20627592 - 20627356
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||   |||||||  ||||||||||||| |||||||||||||||||||| ||||||    
T  20627592 agagataaaaacaaagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgataaacaagcatccaatgccttcaaatcc 20627493  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
     | ||||||||| |||| |||||| |||||||||||||||||  || |||||| || |||||||| || | | ||| ||||||| ||  ||||||||| |    
T  20627492 attcaaaatagttgttgcttcacttttccagtcttctgcaatcattagacgagtttgaatccattaaacatcttttgaagctttaag--ttgcatctcct 20627395  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |  | ||||| ||||| ||||||||| |||||    
T  20627394 gatgaactgcaacttctggtgattttcagcttctgatga 20627356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 53056888 - 53056637
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||   |||||||   ||||||||||||| ||||||||||||||||||| ||||||    
T  53056888 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcc 53056789  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||| |||||||||||||||||  || |||||  || |||||||| || ||| ||| || | || ||  ||||||| |||    
T  53056788 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagacgatgttgaatccattaaacagcttttgaaaccttaag--ttgcatcccat 53056691  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||||||||| ||  ||||| ||| |||||| || ||||||    
T  53056690 gatgaactgcagcttctagtgatttttggcttctgataaacttgtttttgatga 53056637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 20 - 265
Target Start/End: Complemental strand, 29951591 - 29951347
Alignment:
Q  20 aaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaa 119  Q
    ||||| ||| |||||| |||||||||||||||| ||||| |||||||||   ||| |||||  || ||||||||||||||||||| |||||||| |||||    
T  29951591 aaactgagtggtggagatagtggttgtacactttgtacaattgtactttgttaactctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 29951492  T
Q  120 tagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaat 219  Q
    |||| |||| ||||||| ||  ||||||| |||||||| ||||||||||||||||||||| | ||||| ||||||| |||||  | |||  ||||||| |    
T  29951491 tagttgttgcttcactcctctggtcttctacaatgcttagacgagattaaatccattgaaaaacctttgaagctttaagtctctcgtcttctgatgaact 29951392  T
Q  220 agagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
      ||||||||||||||||||||||| ||| ||  ||||||||||||    
T  29951391 tcagcttctagtgatcttcagcttctgat-aaggtgcttctgatga 29951347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 20 - 265
Target Start/End: Complemental strand, 30000745 - 30000501
Alignment:
Q  20 aaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaa 119  Q
    ||||| ||| |||||| |||||||||||||||| ||||| |||||||||   ||| |||||  || ||||||||||||||||||| |||||||| |||||    
T  30000745 aaactgagtggtggagatagtggttgtacactttgtacaattgtactttgttaactctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 30000646  T
Q  120 tagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaat 219  Q
    |||| |||| ||||||| ||  ||||||| |||||||| ||||||||||||||||||||| | ||||| ||||||| |||||  | |||  ||||||| |    
T  30000645 tagttgttgcttcactcctctggtcttctacaatgcttagacgagattaaatccattgaaaaacctttgaagctttaagtctctcgtcttctgatgaact 30000546  T
Q  220 agagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
      ||||||||||||||||||||||| ||| ||  ||||||||||||    
T  30000545 tcagcttctagtgatcttcagcttctgat-aaggtgcttctgatga 30000501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 26 - 265
Target Start/End: Original strand, 14955439 - 14955676
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||||||||||||||||||||||||||   |||||||  |||||||||||||| || |||||||||||||||| |||| ||| ||||||||| |    
T  14955439 agtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatactttcaaaatagttg 14955538  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| || ||  |||||||||||||||||  || |||||| || |||||||| || ||| ||| ||||||||||  || |||||| ||||||| |  | ||    
T  14955539 ttgctttacctttccagtcttctgcaatctttagacgagtttgaatccattaaacagcttttgaagctttgag--ttacatctcctgatgaactgcaact 14955636  T
Q  226 tctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||| |||||  |||||||| ||| ||||||||||||||||    
T  14955637 tctggtgattctcagcttctgataaacttgcttctgatga 14955676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 26 - 265
Target Start/End: Complemental strand, 46349991 - 46349754
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    ||||||||||| ||||||||||||||||||||| | |||||||  ||| | ||| |||| ||||||||||||||||||| |||||||| |||| ||||||    
T  46349991 agtagtggaggcagtggttgtacacttcgtacaatcgtactttgtcaatgttctctgaagaacaagcatccaatgccttcaaatcctttcaaattagtcg 46349892  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| |||||| ||||||||||||||||||||| |||||||||  ||| |||||| | | ||| |||  || ||  |||| |||| ||||||| |  | ||    
T  46349891 ttgcttcacttttccagtcttctgcaatgcttagacgagattggatcaattgaacaacttttgaagtcttaag--ttgcttctcctgatgaactgcaact 46349794  T
Q  226 tctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||| ||||| |||||||||  |||||||||||||||||||    
T  46349793 tctggtgattttcagcttctaatgaacttgcttctgatga 46349754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 24775695 - 24775492
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||   |||||||  ||| |||||||||| || |||||| ||||||||| ||||||    
T  24775695 agagacaaaaacagagtagtggatgtagtggttgtacacttcgtacaaacgtactttgtcaaagctctttgaagaataagcattcaatgccttcaaatcc 24775596  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| |||||| |||||||||||||||||  || |||||| || ||||| || || ||| ||| ||||||| ||  ||||||||| |    
T  24775595 tttcaaaatagttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacagcttttgaagctttaag--ttgcatctcct 24775498  T
Q  212 gatgaa 217  Q
    ||||||    
T  24775497 gatgaa 24775492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 265
Target Start/End: Original strand, 2785076 - 2785314
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctcttt-gaaaaacaagcatccaatgcctttaaatccttccaaaatagtc 124  Q
    |||||||||||||||||||||||||||||||||   ||||| |  ||||||||||| ||  |||||||||||||||| || |||||||| |||||||||     
T  2785076 agtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagtt 2785175  T
Q  125 gttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagc 224  Q
    |||| |||||| |||||||||||||||||  || |||||| || ||||| || || | | ||| ||||||| ||  ||||||||| ||||||| || | |    
T  2785176 gttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacaacttttgaagctttaag--ttgcatctcctgatgaactacaac 2785273  T
Q  225 ttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||| |||||  ||||||||  || ||||||||||||||||    
T  2785274 ttctggtgattctcagcttctaataaacttgcttctgatga 2785314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 16032523 - 16032662
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||  || ||||||||||||||||||| ||||||    
T  16032523 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaatgctcttcaaagaacaagcatccaatgccttcaaatcc 16032622  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgca 151  Q
    || |||||||||||||| | |||||| |  ||||||||||    
T  16032623 tttcaaaatagtcgttgatacactctcctggtcttctgca 16032662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 22140762 - 22140965
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||| |||||||||||||   ||||| |  |||||||||||||| |||||||||||||||  || ||| ||    
T  22140762 agagacaaaaacagagtagtggaggtagtggttatacacttcgtacatacgtactatgtcaacgctctttgaagaacaagcatccaatgttttcaaaacc 22140861  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
     | |||||||||||||| ||||||  || ||||||||||||| ||| | |||| || ||||| ||||| ||| ||| || |||| ||  ||||||||| |    
T  22140862 cttcaaaatagtcgttggttcacttatctagtcttctgcaatccttaggcgagtttgaatccgttgaacagcttttgaaactttaag--ttgcatctcct 22140959  T
Q  212 gatgaa 217  Q
    ||||||    
T  22140960 gatgaa 22140965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 25398416 - 25398295
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| |||| ||||  |||||||||||||| | |||  || ||||||||| ||||||    
T  25398416 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtgctttgtcaacgctctttgaagagcaaatatgcaatgccttcaaatcc 25398317  T
Q  112 ttccaaaatagtcgttgtttca 133  Q
    || |||||||||||||| ||||    
T  25398316 tttcaaaatagtcgttgcttca 25398295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 153
Target Start/End: Original strand, 21640864 - 21641006
Alignment:
Q  11 aagagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatc 110  Q
    ||||||||||||   |||||||||| |||||||||||||||||||| |   ||||| |  ||||||||||||||||| ||||||||||||| ||| ||||    
T  21640864 aagagacaaaaatagagtagtggagatagtggttgtacacttcgtaaaaacgtactatgtcaacgctctttgaaaaataagcatccaatgcttttcaatc 21640963  T
Q  111 cttccaaaatagtcgttgtttcactcttccagtcttctgcaat 153  Q
    |||||||||||| ||||| |  ||| |||||||||||| ||||    
T  21640964 cttccaaaatagccgttgctatacttttccagtcttctacaat 21641006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 201
Target Start/End: Complemental strand, 12389033 - 12388845
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| |||| |||| |||||||||||  || || |||||||||||||||| |||| |    
T  12389033 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtcctttgccaacgctcttcaaagaagaagcatccaatgccttaaaattc 12388934  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtct 201  Q
    ||   || ||||||| | |||||| |||   ||||||||||| | | |||  |||||||||| ||||| | ||||| ||||||| |||||    
T  12388933 ttttgaattagtcgtagcttcactgttctgatcttctgcaattc-tagacatgattaaatcctttgaacaacctttgaagctttaagtct 12388845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 26 - 195
Target Start/End: Original strand, 20725099 - 20725267
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||| ||||  |||||||||||||||| |||| ||||| ||||||||||  | |||||||||||||||| ||| ||||||||   || ||||||    
T  20725099 agtagtggagatagttattgtacacttcgtacaattgtcctttttcaacgctcttcaagaaacaagcatccaatgtcttcaaatccttttgaattagtcg 20725198  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagcttt 195  Q
    ||| ||||||||||  |||||||||||||| | |||| ||||| |||  ||||| ||||||| |||||||    
T  20725199 ttgcttcactcttctggtcttctgcaatgc-tagacgtgattagatcttttgaacagcctttgaagcttt 20725267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 33583241 - 33583369
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctcttt-gaaaaacaagcatccaatgcctttaaatccttccaaaatagtc 124  Q
    |||| ||||||||||||||||||||||||||||   |||||||  ||||||||||| ||  |||||||||||||||| || |||||||| |||||||| |    
T  33583241 agtattggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagcc 33583340  T
Q  125 gttgtttcactcttccagtcttctgcaat 153  Q
    |||| |||||| |||||||||||| ||||    
T  33583341 gttgcttcacttttccagtcttctacaat 33583369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 228
Target Start/End: Original strand, 5213589 - 5213788
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||||||||||||||||||||||||||   |||||    ||||||| |||||| || ||||||| |||||||| |||||||||||||||||| |    
T  5213589 agtagtggaggtagtggttgtacacttcgtacaaacgtactacgtcaacgct-tttgaataataagcatctaatgccttcaaatccttccaaaatagttg 5213687  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| |  ||| |||||||||||||||||  ||  ||||| || ||||| || || ||| ||| ||||||| ||  ||||||||| ||||||| || ||||    
T  5213688 ttgctatacttttccagtcttctgcaatctttatacgagtttgaatccgttaaacagcttttgaagctttaag--ttgcatctcctgatgaactacagct 5213785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 29855407 - 29855659
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||| ||||||  |||||||||||||||||||||||||||||||||   ||||| |  ||||||| |||||| ||||||||||||||||||| |||| |    
T  29855407 agagataaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactctgtcaacgctttttgaagaacaagcatccaatgccttcaaattc 29855506  T
Q  112 ttccaaaatagtcgttgtttcac-tcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctca 210  Q
    || |||| ||| ||||| ||||| | ||  |||||||||||||  || |||||| || |||||||| || ||| ||| |||  || ||  ||||||| ||    
T  29855507 tttcaaactagccgttgcttcactttttttagtcttctgcaatctttagacgaggttgaatccattaaacagcttttgaagtcttaag--ttgcatccca 29855604  T
Q  211 tgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||| |  || || | ||||| ||  ||||| ||| ||||||||||||||||    
T  29855605 tgatgaactgcaggttttggtgatttttggcttccgataaacttgcttctgatga 29855659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 76 - 265
Target Start/End: Original strand, 11869130 - 11869317
Alignment:
Q  76 ctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccat 175  Q
    ||||||||| ||||||||||||||||||| |||||||| |||| ||| ||||| |||||| ||||||||||||| | | ||| ||||||||| ||| |||    
T  11869130 ctctttgaagaacaagcatccaatgccttcaaatcctttcaaactagacgttgcttcacttttccagtcttctgtatttcttagacgagattgaattcat 11869229  T
Q  176 tgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    | || |   ||| |||| || ||  ||||||| | ||||||| |  ||||||| ||||| ||||||||| |||||| |||||||||||||    
T  11869230 taaacaaattttgaagccttaag--ttgcatcccctgatgaactgcagcttctggtgattttcagcttctgatgaaattgcttctgatga 11869317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 22804184 - 22804048
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||| | |||||||||| |||||||| ||||||||||||| |||||||||  ||||||||||  || ||||| |||| |||||||| || |||    
T  22804184 agagacacaaattgagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgctcttcaaagaacaatcatcgaatgccttcaagtcc 22804085  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttct 148  Q
    || |||||||| ||||| ||||||||||  |||||||    
T  22804084 tttcaaaatagccgttgcttcactcttctggtcttct 22804048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 154
Target Start/End: Complemental strand, 23538312 - 23538185
Alignment:
Q  27 gtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgt 126  Q
    ||||||||| |||||||||||||||||||||| |||| ||||| ||||| ||| | || || |||||| ||||||||| |||| |||   |||||  |||    
T  23538312 gtagtggagatagtggttgtacacttcgtacaattgtcctttttcaacgttctctaaagaataagcattcaatgccttcaaattcttttgaaataaccgt 23538213  T
Q  127 tgtttcactcttccagtcttctgcaatg 154  Q
    ||||||| ||||||||||||||||||||    
T  23538212 tgtttcattcttccagtcttctgcaatg 23538185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 46796528 - 46796287
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || ||| ||| |||||||||          
T  46796528 agagacaaaaacaaagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagtatctaatgccttt------ 46796435  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
       |||| ||| ||||||   ||| ||||||||||||||||| ||| |||||| || ||||| || || | | ||| ||||||| ||  ||||||||| |    
T  46796434 ---caaattagccgttgtaatacttttccagtcttctgcaat-cttagacgagtttgaatcctttaaacaacttttgaagctttaag--ttgcatctcct 46796341  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| |||||   ||||||| ||||||||||||||||||||    
T  46796340 gatgaactgcagcttcttgtgattcacagcttctgatgaacttgcttctgatga 46796287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 11909183 - 11909079
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcctt 113  Q
    ||||| |||| ||||||||||||||||||| |||||||||||| |   |||||||  ||||||||||||||  | |||||||||||||||| ||||||||    
T  11909183 agacataaacaaagtagtggaggtagtggtcgtacacttcgtaaagacgtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctt 11909084  T
Q  114 ccaaa 118  Q
     ||||    
T  11909083 tcaaa 11909079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 11868267 - 11868338
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttga 83  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| | |||||||  |||||||||||||    
T  11868267 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaatcgtactttgtcaacgctctttga 11868338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 27 - 201
Target Start/End: Complemental strand, 19249558 - 19249385
Alignment:
Q  27 gtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgt 126  Q
    |||||||||  ||||||||||||||||||||| |||| || || || |||||||  || ||||| ||||||||||||| ||||||||   || |||  ||    
T  19249558 gtagtggagtaagtggttgtacacttcgtacaattgtcctatttcagcgctcttcaaagaacaaacatccaatgccttcaaatccttttgaattagctgt 19249459  T
Q  127 tgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtct 201  Q
    || ||||||||||  |||||||||||||| | | || |||||||||  ||||| | ||||| ||||||| |||||    
T  19249458 tgcttcactcttctggtcttctgcaatgc-taggcgtgattaaatcgtttgaacaacctttgaagctttaagtct 19249385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 21636831 - 21636742
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||   ||||| |  |||||||||||||| || |||||||||||||    
T  21636831 agagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 21636742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 154
Target Start/End: Original strand, 12968318 - 12968446
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||| |||||||||||||||||||| | |||| ||||||||||| ||||  || || ||| |||||||||||| |||| |||   || ||||||    
T  12968318 agtagtggagatagtggttgtacacttcgtataattgtccttttccaacgttcttcaaagaataagtatccaatgccttcaaattcttttgaattagtcg 12968417  T
Q  126 ttgtttcactcttccagtcttctgcaatg 154  Q
    ||  ||||  |||| ||||||||||||||    
T  12968418 ttacttcatgcttctagtcttctgcaatg 12968446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 21605815 - 21605726
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||   ||| | |  |||||||||||||| || |||||||||||||    
T  21605815 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaatgc 21605726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 163
Target Start/End: Original strand, 50300245 - 50300372
Alignment:
Q  36 gtagtggttgtacacttcgtacacttgtacttttccaacgctc-tttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcac 134  Q
    |||||||||||||||||||||||   |||||||  |||||||| |||||  ||||  |||||||||| || |||||| | | ||||||  |||| |||||    
T  50300245 gtagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacatacatccaatgcgttcaaatcccttc-aaatagcagttgcttcac 50300343  T
Q  135 tcttccagtcttctgcaatgctttgacga 163  Q
    | ||||||||||||||||| ||| |||||    
T  50300344 ttttccagtcttctgcaatccttagacga 50300372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 1053905 - 1053943
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  1053905 agacaaaaacaaagtagtggaggtagtggttgtacactt 1053943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 25398287 - 25398230
Alignment:
Q  159 gacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatga 216  Q
    ||||||||||||| ||||||| | ||||| ||||||| |||||||||||| |||||||    
T  25398287 gacgagattaaattcattgaacaacctttgaagctttaagtcttgcatcttatgatga 25398230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 154
Target Start/End: Complemental strand, 26417826 - 26417698
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    ||||||| || |||||||||||||||| ||||| ||||  |||||||||| |||   || ||  ||||||||||||||| |||| |||   || ||| ||    
T  26417826 agtagtgaagatagtggttgtacactttgtacaattgtcattttccaacgttctccaaagaatgagcatccaatgccttcaaattcttttgaattagccg 26417727  T
Q  126 ttgtttcactcttccagtcttctgcaatg 154  Q
    ||| |||| ||||| ||||||||| ||||    
T  26417726 ttgcttcattcttctagtcttctggaatg 26417698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 265
Target Start/End: Complemental strand, 49666485 - 49666325
Alignment:
Q  102 ctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtct 201  Q
    |||| ||||||| ||||||||||||||||  ||| ||||||||||||||||| ||| |||||| || ||||| |  || | | ||| ||||||| ||  |    
T  49666485 ctttcaatcctttcaaaatagtcgttgttatacttttccagtcttctgcaat-cttagacgagtttgaatccttgaaacaacttttgaagctttaag--t 49666389  T
Q  202 tgcatctcatgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||||| ||||||| |  ||||||| |||||   || |||  |||||| |||||||||||||    
T  49666388 tgcatctcctgatgaactgcagcttctggtgattcacaacttatgatgaaattgcttctgatga 49666325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 45858875 - 45858804
Alignment:
Q  47 acacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaa 118  Q
    ||||||||||||   |||||||  ||||||||||||||  | |||||||||||||||| |||||||| ||||    
T  45858875 acacttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctttcaaa 45858804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 51341011 - 51341054
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtac 57  Q
    ||||||||||  |||||||||||||||||| |||||||||||||    
T  51341011 agacaaaaacagagtagtggaggtagtggtcgtacacttcgtac 51341054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 1064334 - 1064372
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  1064334 agacaaaaacagagtagtggaggtagtggttgtacactt 1064372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 1728176 - 1728130
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtaca 58  Q
    ||||||||||||  ||||||| || ||||||||||||||||||||||    
T  1728176 agagacaaaaacagagtagtgcagatagtggttgtacacttcgtaca 1728130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 4404468 - 4404506
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  4404468 agacaaaaacagagtagtggaggtagtggttgtacactt 4404506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 4457111 - 4457149
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  4457111 agacaaaaacagagtagtggaggtagtggttgtacactt 4457149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 6253431 - 6253512
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaa 108  Q
    |||| ||||||||||||| ||||| || ||||  |||| ||||||||||| ||||  || || ||||||||||||||||||||    
T  6253431 agtaatggaggtagtggtagtacaatt-gtactattgtccttttccaacgttcttcaaagaataagcatccaatgcctttaaa 6253512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 8995995 - 8995957
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  8995995 agacaaaaacagagtagtggaggtagtggttgtacactt 8995957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 9006547 - 9006509
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  9006547 agacaaaaacagagtagtggaggtagtggttgtacactt 9006509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 14321721 - 14321683
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  14321721 agacaaaaacagagtagtggaggtagtggttgtacactt 14321683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 15216379 - 15216341
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  15216379 agacaaaaacagagtagtggaggtagtggttgtacactt 15216341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 16077125 - 16077163
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  16077125 agacaaaaacagagtagtggaggtagtggttgtacactt 16077163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 17281472 - 17281434
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  17281472 agacaaaaacagagtagtggaggtagtggttgtacactt 17281434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 27883579 - 27883617
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  27883579 agacaaaaacagagtagtggaggtagtggttgtacactt 27883617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 28169277 - 28169315
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  28169277 agacaaaaacagagtagtggaggtagtggttgtacactt 28169315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 29933597 - 29933559
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  29933597 agacaaaaacagagtagtggaggtagtggttgtacactt 29933559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 29982751 - 29982713
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  29982751 agacaaaaacagagtagtggaggtagtggttgtacactt 29982713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 30054378 - 30054332
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtaca 58  Q
    ||||||||||||  |||||||||| ||||||||||||| ||||||||    
T  30054378 agagacaaaaacagagtagtggagttagtggttgtacatttcgtaca 30054332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 6490387 - 6490350
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  6490387 gacaaaaacagagtagtggaggtagtggttgtacactt 6490350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 6501041 - 6501004
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  6501041 gacaaaaacagagtagtggaggtagtggttgtacactt 6501004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 11216759 - 11216722
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  11216759 gacaaaaacagagtagtggaggtagtggttgtacactt 11216722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 16666165 - 16666128
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  16666165 gacaagaacaaagtagtggaggtagtggttgtacactt 16666128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 23635907 - 23635944
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  23635907 gacaaaaacagagtagtggaggtagtggttgtacactt 23635944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 38314896 - 38314933
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  38314896 gacaaaaacagagtagtggaggtagtggttgtacactt 38314933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 49666552 - 49666520
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtaca 58  Q
    |||||||||| ||||||||||||||||||||||    
T  49666552 agtagtggagatagtggttgtacacttcgtaca 49666520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 20 - 258
Target Start/End: Original strand, 7710 - 7948
Alignment:
Q  20 aaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaa 119  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| || || ||| ||||||||||||||||||||||||    
T  7710 aaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataaacatacaatgcctttaaatccttccaaaa 7809  T
Q  120 tagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaat 219  Q
    ||||||| | ||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| ||||||| ||||||||||||| |||||||||    
T  7810 tagtcgtggcttcactcttccagtcttttgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatctcctgatgaaat 7909  T
Q  220 agagcttctagtgatcttcagcttcagatgaacttgctt 258  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  7910 agagcttctggtgatcttcagcttctgatgaacttgctt 7948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 160; Significance: 3e-85; HSPs: 81)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 12 - 263
Target Start/End: Original strand, 9069557 - 9069808
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||  ||| |||| ||||| ||||||||| ||||||||||||||||    
T  9069557 agagacaaaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaatgctccttgaagaacaagcatacaatgcctttaaatcc 9069656  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| ||||| | ||||| ||||||| ||| ||||||||| |    
T  9069657 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgatattaaatcccttgaacaacctttgaagctttaagttttgcatctcct 9069756  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgat 263  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||| |||||||    
T  9069757 gatgaaatagagcttctggtgattttcagcttctgatgaacttgtttctgat 9069808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 15088515 - 15088768
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  || ||||||||||||||| ||| ||||||    
T  15088515 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaacaagcatccaatgtcttcaaatcc 15088614  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||  |||||||||||| |    
T  15088615 tttcaaaatagtcgttgcttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttacgtcttgcatctcct 15088714  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |||||||||| ||||||||||||||  ||||||||||||||||||||    
T  15088715 gatgaattagagcttctggtgatcttcagcttatgatgaacttgcttctgatga 15088768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 12 - 263
Target Start/End: Complemental strand, 33691875 - 33691624
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||| ||||||||||||| |||||||||  |||||||||||||| |||||||||| || |||||||||| |    
T  33691875 agagacaaaaacagagtagtggaggtagtggttatacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatctaacgcctttaaattc 33691776  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| || ||||||| |||||||  |||||||||||| |    
T  33691775 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccatttaacagcctttgaagctttatgtcttgcatctcct 33691676  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgat 263  Q
    |||||| |||||||||| ||||| |||| ||||  |||||||||||||||||    
T  33691675 gatgaactagagcttctggtgattttcaacttctaatgaacttgcttctgat 33691624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 12 - 264
Target Start/End: Original strand, 44467059 - 44467312
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||  |||| |||||| || ||||||||||||||||||| ||||||    
T  44467059 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacactctttaaagaacaagcatccaatgccttcaaatcc 44467158  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatctca 210  Q
    || |||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||| | || ||| ||||||| |||||||||||||     
T  44467159 tttcaaaatagtcgttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattgaacaaccttttgaagctttaagtcttgcatctcc 44467258  T
Q  211 tgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatg 264  Q
    ||||||| |  ||||| | ||||||||||||||| |||||||||||||||||||    
T  44467259 tgatgaacttcagcttttggtgatcttcagcttctgatgaacttgcttctgatg 44467312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 12 - 243
Target Start/End: Complemental strand, 13138058 - 13137827
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||| ||||| |||||||||||||||||||||| |||||||||  ||||||||||  || ||||||||||||||||||| |||||     
T  13138058 agagacataaactgagtaatggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatct 13137959  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| ||||||||| |||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| ||||||||||||| |    
T  13137958 tttcaaaatagttgttgcttcactctttcagtcttctgcaatgcttagacgagattaaatccattgattaacctttgaagctttaagtcttgcatctcct 13137859  T
Q  212 gatgaaatagagcttctagtgatcttcagctt 243  Q
     ||||| |||||||||| ||||||||||||||    
T  13137858 tatgaactagagcttctggtgatcttcagctt 13137827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 20 - 249
Target Start/End: Complemental strand, 10883328 - 10883099
Alignment:
Q  20 aaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaa 119  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||||||  ||||||||||  || |||| |||||||||||||| |||||||| |||||    
T  10883328 aaactgagtagtggaggtagtgattgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaggcatccaatgccttcaaatcctttcaaaa 10883229  T
Q  120 tagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaat 219  Q
    ||||||||| |||||||||||||||||||| |||| || ||||||||||||||||||||| | ||||| || |||| ||||||||||||| ||||||| |    
T  10883228 tagtcgttgcttcactcttccagtcttctgaaatgattagacgagattaaatccattgaacaacctttgaaactttaagtcttgcatctcctgatgaact 10883129  T
Q  220 agagcttctagtgatcttcagcttcagatg 249  Q
    | ||||||| ||||||||||||||| ||||    
T  10883128 acagcttctggtgatcttcagcttctgatg 10883099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 21283536 - 21283331
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||| ||||||    
T  21283536 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaataacaagcatccaatgccttcaaatcc 21283437  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||| | ||||| || ||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||||| |||||||||| || |    
T  21283436 tttcaaaatggacgttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatatcct 21283337  T
Q  212 gatgaa 217  Q
    ||||||    
T  21283336 gatgaa 21283331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 21695396 - 21695649
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||| |||||| ||||||||||||||||||| |||||||||  ||||||||||  || ||||||||||||||||||| |||||     
T  21695396 agagacacaaactgagtagttgaggtactggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatca 21695495  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||   |||||||||||| ||||||||||  |||||||||||||||| ||||||||||||||||||||| | | ||| ||||||| ||||||||||||| |    
T  21695496 ttttgaaatagtcgttgcttcactcttctggtcttctgcaatgcttagacgagattaaatccattgaacaacttttgaagctttaagtcttgcatctctt 21695595  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| ||||||||||||||| ||||||||||||| ||||||    
T  21695596 gatgaacttcagcttctggtgatcttcagcttctgatgaacttgcttatgatga 21695649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 26 - 250
Target Start/End: Original strand, 15467925 - 15468149
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||  |||||||||||||| ||||||||||||||||||| ||||||||  ||||||||||    
T  15467925 agtagtggaggtaatggttgtacacctcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatccttttaaaatagtcg 15468024  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| |||||||||||||||||||||| ||| | |||||||||||||| |||||| | ||||| ||||||| ||||||||||||| ||||||| |||||||    
T  15468025 ttgattcactcttccagtcttctgcattgcctagacgagattaaatctattgaacaccctttgaagctttaagtcttgcatctcctgatgaactagagct 15468124  T
Q  226 tctagtgatcttcagcttcagatga 250  Q
    ||| || ||||||||| || |||||    
T  15468125 tctggtaatcttcagcatctgatga 15468149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 2913771 - 2913518
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  || ||||||||||||||||||| ||||||    
T  2913771 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 2913672  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| | |||| ||| ||||||||||| || || || |||||||||| ||||||| ||||||| ||| ||| ||||||||||||| |    
T  2913671 tttcaaaatagtcgttgctccacttttctagtcttctgcattgtttagatgagattaaattcattgaacagcctttgaagatttaagtcttgcatctcct 2913572  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || || |||| |||||||||| |||| ||||||||||||| ||||||    
T  2913571 gatgaactacagtttctggtgatcttcatcttctgatgaacttgcttttgatga 2913518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 30025900 - 30026153
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||| ||| || ||||||||||||||||||| |||||||||  ||||||||||  || |||||||||| |||||||| || ||     
T  30025900 agagacacaaactgagtagtagagatattggttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaacaagcatcgaatgccttcaattct 30025999  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||| ||||| ||||||||| ||||||||||| ||||||  |||||| ||||||||||||  ||| ||| ||||||| ||||||||||||| |    
T  30026000 tttcaaaatagccgttgcttcactctttcagtcttctgcgatgcttatacgagactaaatccattgaccagcgtttgaagctttaagtcttgcatctctt 30026099  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  30026100 gatgaactagagcttctggtgatcttcagcttctgatgaacttgcttctgatga 30026153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 22578184 - 22577959
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| || ||||| ||| ||||||||| ||||||    
T  22578184 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttttaagaacaatcattcaatgccttcaaatcc 22578085  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| ||||||||| ||||||||||||||||||  ||||||||||||| |||||| | ||||| ||||||| ||||||||||||| |    
T  22578084 tttcaaaatagttgttgcttcactcttacagtcttctgcaatgcttaaacgagattaaatctattgaacaccctttgaagctttaagtcttgcatctcct 22577985  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    |||||| |  ||||||| ||||||||    
T  22577984 gatgaacttcagcttctggtgatctt 22577959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 26 - 259
Target Start/End: Complemental strand, 23280107 - 23279875
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||| |||||||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||| |||||||| |||| ||| ||    
T  23280107 agtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaactagccg 23280008  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| | |||| |||||||||||| |||||||| ||| |||||||||||| |||||||||||| ||||||| ||||||||||||| ||||||| || | ||    
T  23280007 ttgctccacttttccagtcttctacaatgcttagacaagattaaatcca-tgaatagcctttgaagctttaagtcttgcatctcctgatgaactacaact 23279909  T
Q  226 tctagtgatcttcagcttcagatgaacttgcttc 259  Q
    ||| ||||| |||| |||| || |||||||||||    
T  23279908 tctggtgattttcaccttctgacgaacttgcttc 23279875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 13880099 - 13880337
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||| | |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  || || ||||||| |||||||| ||||||    
T  13880099 agagacacaaagtgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaataagcatctaatgccttcaaatcc 13880198  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| ||||||| || ||||||||||||||||| ||||||||||| ||||||||| ||||||| |||||||  ||||||||  || |    
T  13880199 tttcaaaatagtcgttgcttcactcgtcgagtcttctgcaatgcttagacgagattaagtccattgaacagcctttgaagctttatgtcttgcaattcct 13880298  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| ||||||||||  |||||||||||||| |||||    
T  13880299 gatgaactagagcttctcatgatcttcagcttctgatga 13880337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 48237065 - 48236814
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| || |||||||  ||||||| ||||||    
T  48237065 agagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataagcatctgatgccttcaaatcc 48236966  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| | ||||||| |||||  || ||||||| |||||||||| ||||||||| ||||||||||| | | ||| ||||||| ||  ||||||||| |    
T  48236965 tttcaaacttgtcgttgcttcaccttttcagtcttatgcaatgcttagacgagattgaatccattgaacaacttttgaagctttaag--ttgcatctcct 48236868  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| ||||| ||||||||| ||||||||||||||||||||    
T  48236867 gatgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatga 48236814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 2500033 - 2500286
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| ||||||||||  ||||||||||||||| ||||| |||||||||  |||| |||||  ||  | ||||||||||||| || ||||||    
T  2500033 agagacacaaactgagtagtggagaaagtggttgtacactttgtacaattgtactttgtcaactctcttcaaaggataagcatccaatgctttcaaatcc 2500132  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | | ||| ||||||| ||||||||||||| |    
T  2500133 tttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacatttgaagctttaagtcttgcatctcct 2500232  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||  ||  ||||||||| |||||| |||||||| ||||||||||||| ||||||    
T  2500233 gaaaaacaagagcttctggtgatcctcagcttctgatgaacttgcttatgatga 2500286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 28409034 - 28409239
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| ||||| ||||||||||||| ||||||    
T  28409034 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcc 28409133  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||| | |||| |||||||||| |||||||||||||| || ||||||||||||||||||||| | ||||| |||| ||  |||||||||||| |    
T  28409134 tttcaaaataattgttgcttcactcttctagtcttctgcaatgtttagacgagattaaatccattgaacaacctttgaagccttatgtcttgcatctctt 28409233  T
Q  212 gatgaa 217  Q
    ||||||    
T  28409234 gatgaa 28409239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 12 - 240
Target Start/End: Original strand, 13302805 - 13303033
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||| | |||||||||||||||| ||||| |||||||||  ||||||||||  || |||||||||| |||||||| ||||||    
T  13302805 agagacacaaactgagtagtggtgatagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgccttcaaatcc 13302904  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||||||| |||||||| |||||||| ||||| ||||||||||||||| | ||||| ||||||| ||||||||||||| |    
T  13302905 tttcaaaatagtcgttgcttcactcttctagtcttctacaatgcttagacgatattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 13303004  T
Q  212 gatgaaatagagcttctagtgatcttcag 240  Q
     ||||| || ||||||| |||||||||||    
T  13303005 aatgaactacagcttctggtgatcttcag 13303033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 24788136 - 24788361
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||  |||  ||||||||| |||||||| |||||||||| ||||||    
T  24788136 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaattctctttgaagaacaagcacccaatgccttcaaatcc 24788235  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||| |||||| |||||||||| ||||||||||||||||| || || |||||||| |||||| | ||||| ||||||| ||||||||||||| |    
T  24788236 tttcaaaatattcgttgcttcactcttctagtcttctgcaatgcttagatgatattaaatctattgaacaacctttgaagctttaagtcttgcatctcct 24788335  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
     ||||| |  ||||||| ||||||||    
T  24788336 aatgaacttcagcttctggtgatctt 24788361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 9709965 - 9709729
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  || |||||| ||||||||| ||||||||||||| ||||||| |  |||||||||||||| |||||||||| |||||||| ||||||    
T  9709965 agagacaaaaacagagcagtggatgtagtggttttacacttcgtacagttgtactatgtcaacgctctttgaagaacaagcatctaatgccttcaaatcc 9709866  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| ||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| || |||| |||||||   | ||||||||| |    
T  9709865 tttcaaactaggcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaggctttgaagcttt--atgttgcatctcct 9709768  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |  ||||||| ||||| ||||||||| |||||    
T  9709767 gatgaactgcagcttctggtgattttcagcttctgatga 9709729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 11319400 - 11319638
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||| || ||||| |||  ||||||||||  ||||||| ||||||||||| || ||||||    
T  11319400 agagacacaaactgagtagtggagatagtggttgtacacttcgtgcaattgtaatttgtcaacgctcttcaaaaaacacgcatccaatgcattcaaatcc 11319499  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||  ||||||||| |||||||||||||||||| ||| ||||||||||||||||| | ||||| ||||||  ||||||||||||| |    
T  11319500 tttcaaaatagttgttacttcactctttcagtcttctgcaatgcttagacaagattaaatccattgaacatcctttgaagcttgaagtcttgcatctctt 11319599  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||  || | ||||| ||||||||||||||| |||||    
T  11319600 gatgacctacaacttctggtgatcttcagcttctgatga 11319638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 217
Target Start/End: Complemental strand, 30945518 - 30945316
Alignment:
Q  13 gagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcct 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||  ||||||||||||||||||| |||||||    
T  30945518 gagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaggaacaagcatccaatgccttcaaatcct 30945419  T
Q  113 tccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatg 212  Q
    | ||||||||| |||| |||||| ||||| |||||| |||| ||| ||||||||||||||| ||||| | ||||| ||||||| ||  ||||||||| ||    
T  30945418 ttcaaaatagttgttgcttcacttttccaatcttctacaatacttagacgagattaaatccgttgaacaacctttgaagctttaag--ttgcatctcctg 30945321  T
Q  213 atgaa 217  Q
    |||||    
T  30945320 atgaa 30945316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 33605680 - 33605932
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||||| | |||||||  |||||||||||||| ||||||||||||||||||| ||||||    
T  33605680 agagacaaaaacatagtagtgaaggtagtggttgtacacttcgtacaatcgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 33605779  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatctca 210  Q
    || |||||||||| ||| |||| | |||||||| |||||| ||||| ||||||||||||||| ||||| |||| ||| |||||||   | |||||||||     
T  33605780 tttcaaaatagtcattgcttcaattttccagtcatctgcattgcttagacgagattaaatccgttgaaaagccttttgaagcttt--atgttgcatctcc 33605877  T
Q  211 tgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||| |  ||||||| ||||| ||||||||| |||||| | | |||||||||    
T  33605878 tgatgaactgcagcttctggtgattttcagcttctgatgaattcgattctgatga 33605932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 11792902 - 11793140
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||||||| |||||| |||||||||||||||||||||| |||||||||  ||||||||||  || |||||||||| ||||| || |||| |    
T  11792902 agagacacaaactaagtggtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatcaaatgctttcaaatgc 11793001  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||||||   |||||  ||||||||| ||||||||||| ||||||||| | ||||| ||||||| ||||||||||||| |    
T  11793002 tttcaaaatagtcgttgcttcactcttatggtctttcgcaatgcttagacgagattaagtccattgaacaacctttaaagctttaagtcttgcatctcct 11793101  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |  ||||||| |||||||| |||||| |||||    
T  11793102 gatgaacttcagcttctggtgatctttagcttctgatga 11793140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 28622519 - 28622268
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  || ||| |||||||||||||||||| ||||||| |||||||||  |||||| ||||||||||||| ||||||||||||| ||||||    
T  28622519 agagacaaaaacagagaagtagaggtagtggttgtacacctcgtacaattgtactttgtcaacgccctttgaaaaacaaacatccaatgccttcaaatcc 28622420  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| ||| ||||| |||||| ||| ||| ||||||||||||| ||||||||| ||||||||||| | | ||| ||||||| ||  ||||||||| |    
T  28622419 tttcaaattagccgttgcttcacttttctagtattctgcaatgcttagacgagattgaatccattgaacaacttttgaagctttaag--ttgcatctcct 28622322  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| ||||| || |||||  ||||||||||||||||||||    
T  28622321 gatgaactgcagcttctggtgatttttagcttatgatgaacttgcttctgatga 28622268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 30944486 - 30944283
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| ||||| |||  |||||||||||||| || |||||||||||||||| ||||||    
T  30944486 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtattttgtcaacgctctttgaagaataagcatccaatgccttcaaatcc 30944387  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| |||||| ||||| ||||||||||| ||| ||||||||||||||| ||||| | ||||| ||||||| ||  ||||||||| |    
T  30944386 tttcaaaatagttgttgcttcacttttccaatcttctgcaatacttagacgagattaaatccgttgaacaacctttgaagctttaag--ttgcatctcct 30944289  T
Q  212 gatgaa 217  Q
    ||||||    
T  30944288 gatgaa 30944283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 12 - 209
Target Start/End: Original strand, 21692282 - 21692479
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||||||||||||||||||||| |||| |||||||||  ||||||||||  || ||||||||||||||||||| ||||||    
T  21692282 agagacacaaactgagtagtggaggtagtggttgtacacttcatacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 21692381  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctc 209  Q
    || ||||| |||||||| ||||||||||  |||||||||||||||| || |||||||||  ||||||||| | ||| ||||||| |||||||||||||    
T  21692382 tttcaaaacagtcgttgcttcactcttctggtcttctgcaatgcttagaagagattaaaatcattgaataacttttgaagctttaagtcttgcatctc 21692479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 16316720 - 16316515
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||| || ||||||||||  || ||||||||||||||| ||| ||||||    
T  16316720 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatttcaacgctcttcaaagaacaagcatccaatggcttcaaatcc 16316621  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||  |||| ||||||||||  |||||||||||| ||| |||| |||||||||||||||| | ||||| ||||||| ||||||||||| | |    
T  16316620 tttcaaaatagctgttgcttcactcttctggtcttctgcaattcttagacgtgattaaatccattgaacaacctttgaagctttaagtcttgcatcccct 16316521  T
Q  212 gatgaa 217  Q
    ||||||    
T  16316520 gatgaa 16316515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 39284727 - 39284475
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||  ||||||||||  || ||||| ||||||||||||| |||| |    
T  39284727 agagacacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaaacatccaatgccttcaaattc 39284628  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
     |   || ||||||||||||||||||||  |||||| ||||||| | | || |||||||||| ||||| ||||||| ||||||||| |||  |||||  |    
T  39284627 atttgaattagtcgttgtttcactcttctggtcttcagcaatgc-taggcgtgattaaatcctttgaacagcctttgaagctttgattctctcatcttct 39284529  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||  |  ||||||| ||||||||||||||| ||||||||||||||||||||    
T  39284528 gatgatcttcagcttctggtgatcttcagcttctgatgaacttgcttctgatga 39284475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 12 - 216
Target Start/End: Original strand, 13648724 - 13648928
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||| | |||||||||| |||||||||||||||||||||| ||||||| |  ||||||||||  || | ||||||||||||| ||||||||||    
T  13648724 agagacacaaattgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagatcaagcatccaatgtctttaaatcc 13648823  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||| ||||| ||||||||| |||||||||||||||||| |||| |||||||||||||||| | | ||| ||||||| ||||| ||||||| |    
T  13648824 tttcaaaatagccgttgcttcactctttcagtcttctgcaatgcttagacgcgattaaatccattgaacatcttttgaagctttaagtctcgcatctcct 13648923  T
Q  212 gatga 216  Q
    |||||    
T  13648924 gatga 13648928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 12 - 209
Target Start/End: Complemental strand, 13730838 - 13730641
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| || ||||||||||||||||||| |||||||||  ||||||||||  || |||||||||||||||| || |||||     
T  13730838 agagacacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcattcaaatct 13730739  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctc 209  Q
    || |||||||| ||||| |||||||||  |||||| |||||||||| ||||||||||||||||||||| | ||||| ||||||| || ||||||||||    
T  13730738 tttcaaaatagccgttgcttcactcttttagtcttatgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagccttgcatctc 13730641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 26 - 195
Target Start/End: Complemental strand, 19237192 - 19237024
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    ||||||||||||||||||||||||||||||| | ||||| |||  |||||||||||||| ||||||||||||||||||| |||||||| |||| ||| ||    
T  19237192 agtagtggaggtagtggttgtacacttcgtataattgtagtttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaagtagccg 19237093  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagcttt 195  Q
    ||| ||||||||||  |||||||||||||| | ||||||||||||||| ||||| ||||||| |||||||    
T  19237092 ttgcttcactcttctggtcttctgcaatgc-tagacgagattaaatcctttgaacagcctttgaagcttt 19237024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 14193109 - 14193243
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||| ||||||||| ||||||||| ||||||    
T  14193109 agagacaaaaacagagtagtagaggtagtggttgtacacttcgtacacttgtactttgttaacgctctttgaagaacaagcattcaatgccttcaaatcc 14193208  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtctt 146  Q
    || |||||||||||||| |||||||||||||||||    
T  14193209 tttcaaaatagtcgttgcttcactcttccagtctt 14193243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 14426542 - 14426745
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||| |||||   |||||||  |||||||||||||| ||||||||||||||||||| ||||||    
T  14426542 agagacaaaaacagagtagtggaggtagtggttgtacacttagtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 14426641  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||| |||||||||||||||||  || || ||| || |||||||| || ||| | | ||||||| ||  ||||||||| |    
T  14426642 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagatgagtttgaatccattaaacagcttctgaagctttaag--ttgcatctcct 14426739  T
Q  212 gatgaa 217  Q
    ||||||    
T  14426740 gatgaa 14426745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 331640 - 331894
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| |||||  |||||||||||||||||||||||||||||||| |||||||||  ||||||| |||||  || |||||||||||||||| | ||||    
T  331640 agagacacaaactgtgtagtggaggtagtggttgtacacttcgtacatttgtactttgtcaacgct-tttgagcaataagcatccaatgccttcagatcc 331738  T
Q  112 -ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctca 210  Q
     ||| |||||||  |||| |||||||||||||||||||||||||||| |||||  || |||||||  || | ||||| ||||||| ||||  |||||||     
T  331739 tttcaaaaatagctgttgcttcactcttccagtcttctgcaatgcttggacgaccttgaatccataaaacaacctttgaagctttaagtc-cgcatctcc 331837  T
Q  211 tgatgaaatagagcttctagtgatcttcagcttcagatgaac--ttgcttctgatga 265  Q
    ||||| | |  ||||||| ||||||||||||||| |||||||  |||||||||||||    
T  331838 tgatggacttcagcttctggtgatcttcagcttctgatgaacttttgcttctgatga 331894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 12366895 - 12366706
Alignment:
Q  28 tagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgtt 127  Q
    |||||||||||||||||||| |||||||||| ||||||| |  ||||||||||  || ||||  |||||||||| || |||||||| ||||||||| |||    
T  12366895 tagtggaggtagtggttgtatacttcgtacaattgtactatgtcaacgctcttcaaagaacagacatccaatgctttcaaatcctttcaaaatagttgtt 12366796  T
Q  128 gtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaa 217  Q
    | |||||||| |||||||||||||||||||  |||||||||||||||||||| |||| || ||||||| ||| ||||| ||| |||||||    
T  12366795 gcttcactctcccagtcttctgcaatgcttaaacgagattaaatccattgaacagcccttgaagctttaagttttgcacctcctgatgaa 12366706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 29935521 - 29935297
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||| ||||||| |  ||||||||||| || |||||||||||||||| || ||||||    
T  29935521 agagacacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctctttaaagaacaagcatccaatgctttcaaatcc 29935422  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| ||||||||||  ||||||||||||| ||    | ||||||||  |||||| | ||||| ||  ||| ||||||||||||| |    
T  29935421 tttcaaaatagtcgttgcttcactcttctggtcttctgcaatg-ttaagtgtgattaaatatattgaacaacctttgaaattttaagtcttgcatctcct 29935323  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    |||||| |  ||||||| ||||||||    
T  29935322 gatgaactttagcttctggtgatctt 29935297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 35952851 - 35952599
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||| ||||||||||||||||||||||||||||   |||||||  |||||||||||||  ||||| ||||||||||||| ||||||    
T  35952851 agagacaaaaacagagtaatggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgatgaacaaacatccaatgccttcaaatcc 35952752  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaat-ccattgaatagcctttcaagctttgagtcttgcatctca 210  Q
    || |||||||||||||| |||||| |||||||||||| |||| ||| |||||| || ||| ||||| || ||| ||| |||| || ||  |||||||       
T  35952751 tttcaaaatagtcgttgcttcacttttccagtcttcttcaatccttagacgaggttgaatcccattaaacagcttttgaagccttaag--ttgcatcctc 35952654  T
Q  211 tgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||| |  | ||||| ||||| || |||||| ||| ||||||||||||||||    
T  35952653 tgatgaactgcaacttctggtgatttttagcttctgataaacttgcttctgatga 35952599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 4821469 - 4821719
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||   |||||||| |||||||||||||| ||||||||||||||||||| |||| |    
T  4821469 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttttcaacgctctttgaagaacaagcatccaatgccttcaaat-c 4821567  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||| ||||| | |||| ||| ||||||||| |||  || |||||| || |||   || || ||| ||| ||||||| ||  ||| |||||      
T  4821568 tttcaaaatagccgttgctccacttttctagtcttctgtaatctttagacgagtttgaatttgttaaacagcttttgaagctttaag--ttgtatctccg 4821665  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| ||||| ||||||||| || |||||||||||||||||    
T  4821666 gatgaactgcagcttctggtgattttcagcttctgacgaacttgcttctgatga 4821719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 16112047 - 16111908
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||| || | |    
T  16112047 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaatttc 16111948  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgca 151  Q
    |||||||| |||||||| |||||| || | ||||||||||    
T  16111947 ttccaaaaaagtcgttgcttcactttttccgtcttctgca 16111908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 208
Target Start/End: Complemental strand, 5000985 - 5000788
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||| |  ||||| ||||  || ||||||||| |||||| || ||||||    
T  5000985 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgttcttcaaagaacaagcattcaatgctttcaaatcc 5000886  T
Q  112 ttccaaaatagtcgttgtttcac-tcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatct 208  Q
    || |||||||||||||| ||||| |||    ||||| |||||||||| | ||||||| ||||||||||| | ||||| ||||| | ||||||||||||    
T  5000885 tttcaaaatagtcgttgcttcacttctcttggtcttttgcaatgcttgggcgagattgaatccattgaacaacctttgaagctctaagtcttgcatct 5000788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 13018666 - 13018494
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcctt 113  Q
    ||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  |||| | ||||||||||||||| || | | |    
T  13018666 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaatccagcatccaatgccttcaacttcat 13018567  T
Q  114 ccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagccttt 187  Q
      ||||||||||||| |||||||| | ||||||||||||| | | | || |||||||||||||||| |||||||    
T  13018566 ttaaaatagtcgttgcttcactctcctagtcttctgcaatac-tgggcgtgattaaatccattgaacagccttt 13018494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 12174482 - 12174342
Alignment:
Q  34 aggtagtggttgtacacttcgtacacttgtacttttccaacgctcttt-gaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttc 132  Q
    |||||||||||||||||||||||||   |||||||  ||||||||||| ||  |||||||||||||||| || |||||||| |||||||||||||| |||    
T  12174482 aggtagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagtcgttgcttc 12174383  T
Q  133 actcttccagtcttctgcaatgctttgacgagattaaatcc 173  Q
    ||| ||||||||||||||||| ||| |||||| || |||||    
T  12174382 acttttccagtcttctgcaatccttagacgaggttgaatcc 12174342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 237
Target Start/End: Original strand, 13692372 - 13692562
Alignment:
Q  38 agtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactct 137  Q
    ||||||||||||||||||||| |||||||||  |||| |||| | || | ||||||||||||| ||||         ||||||||| |||| ||||||||    
T  13692372 agtggttgtacacttcgtacaattgtactttgtcaacactctataaagatcaagcatccaatgtcttt---------caaaatagttgttgcttcactct 13692462  T
Q  138 tccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttctagtgatctt 237  Q
    ||||||||||||||||||||  |||||||||||||||||||| | ||||| ||||||| |||||| |||||  ||||||  |  ||||||| ||||||||    
T  13692463 tccagtcttctgcaatgcttatacgagattaaatccattgaacaacctttgaagctttaagtcttacatcttctgatgagctttagcttctggtgatctt 13692562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 33 - 195
Target Start/End: Original strand, 13880604 - 13880766
Alignment:
Q  33 gaggtagtggttgtac-acttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgttt 131  Q
    |||||||||||||||| |||||||||| |||| ||||| ||||||||||  || |||||||||||| |||||| ||||||||   || ||||||||| ||    
T  13880604 gaggtagtggttgtaccacttcgtacaattgtcctttttcaacgctcttcaaagaacaagcatccagtgccttcaaatccttttgaattagtcgttgctt 13880703  T
Q  132 cactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagcttt 195  Q
    |||||||| ||||||||||||||| | | || |||||||||  ||||| ||||||| |||||||    
T  13880704 cactcttctagtcttctgcaatgc-taggcgtgattaaatcttttgaacagcctttgaagcttt 13880766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 75 - 265
Target Start/End: Complemental strand, 16543120 - 16542932
Alignment:
Q  75 gctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatcca 174  Q
    |||||||||| ||||||||||||||||||| ||||| || |||||||||||||| |||||| |||||||||||||||||  ||  ||||| || ||||||    
T  16543120 gctctttgaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgcttcacttttccagtcttctgcaatcattaaacgagtttgaatcca 16543021  T
Q  175 ttgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    || || ||| ||| |||| ||   | ||||||||| ||||||| |  ||||| | ||||| ||||| ||| ||||||||| ||||||||||    
T  16543020 ttaaacagcttttgaagcatt--atgttgcatctcctgatgaactgcagcttatggtgattttcagtttctgatgaactttcttctgatga 16542932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 75 - 265
Target Start/End: Original strand, 16622542 - 16622730
Alignment:
Q  75 gctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatcca 174  Q
    |||||||||| ||||||||||||||||||| ||||| || |||||||||||||| |||||| |||||||||||||||||  ||  ||||| || ||||||    
T  16622542 gctctttgaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgcttcacttttccagtcttctgcaatcattaaacgagtttgaatcca 16622641  T
Q  175 ttgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    || || ||| ||| |||| ||   | ||||||||| ||||||| |  ||||| | ||||| ||||| ||| ||||||||| ||||||||||    
T  16622642 ttaaacagcttttgaagcatt--atgttgcatctcctgatgaactgcagcttatggtgattttcagtttctgatgaactttcttctgatga 16622730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 29 - 250
Target Start/End: Complemental strand, 2265665 - 2265446
Alignment:
Q  29 agtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttg 128  Q
    ||||||||||||||||||||||||||||||   ||||| |  |||||||||||||| || ||||||  ||| |||| ||||||||||||||||| |||||    
T  2265665 agtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcattaaataccttcaaatccttccaaaatagccgttg 2265566  T
Q  129 tttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttct 228  Q
     |  ||| || ||||||||||||||  || |||||| || ||||  || || ||| ||| ||||||| ||  ||||||||| ||||||| || | |||||    
T  2265565 ctatactttttcagtcttctgcaatctttagacgagtttgaatctgttaaacagcttttaaagctttaag--ttgcatctcctgatgaactacaacttct 2265468  T
Q  229 agtgatcttcagcttcagatga 250  Q
     |||||  |||||||| |||||    
T  2265467 ggtgattctcagcttctgatga 2265446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 16310070 - 16309961
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||||| ||||||| |  ||||||||||  || ||||||||||||||||||| ||||||    
T  16310070 agagacacaaactgagtagtgtagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 16309971  T
Q  112 ttccaaaata 121  Q
    || |||||||    
T  16309970 tttcaaaata 16309961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 71 - 195
Target Start/End: Complemental strand, 15704603 - 15704479
Alignment:
Q  71 caacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaa 170  Q
    |||||||||||||| || |||||||||||||||| ||||||||||||||||||||||| |  ||| |||||||||||||||||  || |||||| || ||    
T  15704603 caacgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaa 15704504  T
Q  171 tccattgaatagcctttcaagcttt 195  Q
    ||| || || ||| ||| |||||||    
T  15704503 tccgttaaacagcttttgaagcttt 15704479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 13260778 - 13260561
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| |||||  ||||||||| |||||||||||||||||||||| ||||||| |  ||| ||||||  || |||||||||||||||| || | |       
T  13260778 agagacacaaactgggtagtggagatagtggttgtacacttcgtacaattgtactatctcaatgctcttccaagaacaagcatccaatgctttcata--- 13260682  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
        | |||||| |||| || |||| ||  |||||| ||||||||| |||||||||||||||||| || || ||||  |||||| ||||||||||||| |    
T  13260681 ----agaatagttgttgctttactcctctggtcttccgcaatgcttggacgagattaaatccatt-aacagtctttggagctttaagtcttgcatctcct 13260587  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    |||||| |  ||||||| ||||||||    
T  13260586 gatgaactttagcttctggtgatctt 13260561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 8182925 - 8183175
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||   ||| | |  |||||||||||||| || ||||||| | || |||| |||||    
T  8182925 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacagacgtattatgtcaacgctctttgaagaataagcatcaagtgtctttcaatcc 8183024  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| |  ||| ||||||||||||||||| ||| |||||| || || |  ||  | | | ||| ||||||||||  ||||||||| |    
T  8183025 tttcaaaatagttgttgctatacttttccagtcttctgcaat-cttagacgagtttgaaacttttatacaactttttaagctttgag--ttgcatctcct 8183121  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| |||||   ||||||  ||||||||||||||| ||||    
T  8183122 gatgaactgcagcttctggtgattcacagcttttgatgaacttgcttctaatga 8183175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 208
Target Start/End: Complemental strand, 13894147 - 13893966
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    ||||||||||||||||||||||||| | ||||| |||| ||||| ||| ||| ||| || ||||| ||| ||||||||| ||||||||   || ||| ||    
T  13894147 agtagtggaggtagtggttgtacacgttgtacaattgtcctttttcaatgctttttaaagaacaaacattcaatgccttcaaatccttttgaattagccg 13894048  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatct 208  Q
    ||| ||||||||||  |||||||||||||| | | || |||||||||| ||||| | ||||| ||||||| ||| || |||||    
T  13894047 ttgcttcactcttctggtcttctgcaatgc-taggcgtgattaaatcctttgaacaacctttgaagctttaagtatttcatct 13893966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 1293022 - 1293118
Alignment:
Q  9 agaagagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgccttt 105  Q
    |||||||||||||||  |||||||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || |||||||||||||||||    
T  1293022 agaagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 1293118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 19711176 - 19711060
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||  ||||||||||||||||||||||   |||||||  ||| ||||||||||  | |||||||||||||||| ||||||    
T  19711176 agagacaaaaacagagtagtggaaatagtggttgtacacttcgtacaaacgtactttgtcaatgctctttgaaggataagcatccaatgccttcaaatcc 19711077  T
Q  112 ttccaaaatagtcgttg 128  Q
    || |||| |||||||||    
T  19711076 tttcaaattagtcgttg 19711060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 16556751 - 16556664
Alignment:
Q  62 gtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctg 149  Q
    |||||||| |||||||||||||| ||||||||  ||||||||| |||||||| |||||||| ||||| |||||| |||||||||||||    
T  16556751 gtactttttcaacgctctttgaagaacaagcaatcaatgccttaaaatcctttcaaaatagccgttgcttcacttttccagtcttctg 16556664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 16608911 - 16608998
Alignment:
Q  62 gtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctg 149  Q
    |||||||| |||||||||||||| ||||||||  ||||||||| |||||||| |||||||| ||||| |||||| |||||||||||||    
T  16608911 gtactttttcaacgctctttgaagaacaagcaatcaatgccttaaaatcctttcaaaatagccgttgcttcacttttccagtcttctg 16608998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 41842436 - 41842254
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||||||| ||||||| |  |||||| |||| ||||||||| |||||||| ||| || | |    
T  41842436 agagacacaaactgagtagtgcaggtagtggttgtacacttcgtacaattgtactctgtcaacgcactttaaaaaacaagtatccaatgtcttcaacttc 41842337  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctt 194  Q
     |   || ||||||||| |||||||| |   |||| |||| ||||| |||||||| ||||| | |||| | ||||| ||||||    
T  41842336 atttgaattagtcgttgcttcactctcctgatcttatgcagtgcttagacgagatcaaatcaaatgaacaacctttgaagctt 41842254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 4494634 - 4494706
Alignment:
Q  145 ttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaa 217  Q
    ||||||||||||| ||||||||||||||||||||| | ||||| ||||||| ||||||||||||| |||||||    
T  4494634 ttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaa 4494706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 19339399 - 19339324
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    |||||||||||||||||||||||||||||||||   ||||| |  |||||||||||||| || |||||||||||||    
T  19339399 agtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 19339324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 27871713 - 27871803
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgc-tctttgaaaaacaagcatccaatgc 101  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||   ||||| |  |||||| |||||||| || |||||||||||||    
T  27871713 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgcttctttgaagaataagcatccaatgc 27871803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 13472665 - 13472576
Alignment:
Q  90 agcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaa 179  Q
    |||||| |||||| | |||||||| ||||||||| |||| |||||||||    |||||| |||||||| |||||||||||||||||||||    
T  13472665 agcatcaaatgccatcaaatcctttcaaaatagttgttgcttcactcttatgatcttctacaatgcttagacgagattaaatccattgaa 13472576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 14425444 - 14425531
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||   ||| | |  |||||||||||||| || |||||||||||||    
T  14425444 agacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtaatatgtcaacgctctttgaagaataagcatccaatgc 14425531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 9098385 - 9098283
Alignment:
Q  36 gtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcact 135  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||  || ||||| |||| ||||| || ||||||||   || ||| ||||| ||||||    
T  9098385 gtagtggttgtacacttcgtacaattgtcctttttcaacgctcttcaaagaacaaacatctaatgcattcaaatccttttgaattagccgttgcttcact 9098286  T
Q  136 ctt 138  Q
    |||    
T  9098285 ctt 9098283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 48062983 - 48062890
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgccttt 105  Q
    ||||||| ||||  |||| ||||| |||||||||||| |||||||||   ||||| |  |||||||||||||| || |||||||||||||||||    
T  48062983 agagacagaaacagagtaatggagatagtggttgtacgcttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 48062890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 4494572 - 4494628
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttt 68  Q
    |||||||||||   |||||||||||||| |||||||||||||||||| |||||||||    
T  4494572 agagacaaaaagagagtagtggaggtagcggttgtacacttcgtacaattgtacttt 4494628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 24794878 - 24794832
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtaca 58  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||    
T  24794878 agagacaaaaacagagtagtggaagtagtggttgtacacttcgtaca 24794832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 14193241 - 14193301
Alignment:
Q  184 ctttcaagctttgagtcttgcatctcatgatgaaatagagcttctagtgatcttcagcttc 244  Q
    |||| ||||||| ||||||||||||| ||||||| |||||||| | ||||||||| |||||    
T  14193241 ctttgaagctttaagtcttgcatctcttgatgaactagagcttatggtgatcttctgcttc 14193301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 3476459 - 3476421
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  3476459 agacaaaaacagagtagtggaggtagtggttgtacactt 3476421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 4412125 - 4412079
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtaca 58  Q
    ||||||||||||  ||||||||| |||||||||||||| ||||||||    
T  4412125 agagacaaaaacagagtagtggaagtagtggttgtacagttcgtaca 4412079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 6044330 - 6044292
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  6044330 agacaaaaacagagtagtggaggtagtggttgtacactt 6044292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 8933701 - 8933739
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  8933701 agacaaaaacagagtagtggaggtagtggttgtacactt 8933739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 13682502 - 13682540
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  13682502 agacaaaaacagagtagtggaggtagtggttgtacactt 13682540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 15216498 - 15216536
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  15216498 agacaaaaacagagtagtggaggtagtggttgtacactt 15216536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 18419296 - 18419334
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  18419296 agacaaaaacagagtagtggaggtagtggttgtacactt 18419334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 18441377 - 18441415
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  18441377 agacaaaaacagagtagtggaggtagtggttgtacactt 18441415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 40054873 - 40054835
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  40054873 agacaaaaacagagtagtggaggtagtggttgtacactt 40054835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 19985931 - 19985894
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  19985931 gacaaaaacagagtagtggaggtagtggttgtacactt 19985894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 30049701 - 30049738
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  30049701 gacaaaaacagagtagtggaggtagtggttgtacactt 30049738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 31116629 - 31116592
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  31116629 gacaaaaacagagtagtggaggtagtggttgtacactt 31116592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 48806042 - 48805953
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    |||||||||| |  ||||||||| ||||||||||||||||| ||||    ||||| |  |||||||||||||| ||  ||||||||||||    
T  48806042 agagacaaaatcagagtagtggaagtagtggttgtacactttgtacgaacgtactatgtcaacgctctttgaagaaatagcatccaatgc 48805953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 1e-84; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 22600264 - 22600026
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||| ||||||    
T  22600264 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 22600165  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||| ||||||||||||| |    
T  22600164 tttcaaaatagtcgttgttttactcttccagtcttctgcaatgcttagacaagattaaatccattgaacagcctttgaagctttaagtcttgcatctcct 22600065  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |||||||||| |||||||| |||||| |||||    
T  22600064 gatgaactagagcttctggtgatctttagcttctgatga 22600026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 1900343 - 1900581
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||||||||||||||||||||| ||||  ||||||||  |||||||||||||| ||||||||| ||||||||||||||||    
T  1900343 agagacaaaaacagagtagtggaggtagtggttgtacacttcttacaactgtactttgtcaacgctctttgaagaacaagcattcaatgcctttaaatcc 1900442  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||| ||||||||||||| |    
T  1900443 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaataacctttgaagctttaagtcttgcatctcct 1900542  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |||| ||||| | |||||| |||||| |||||    
T  1900543 gatgaactagatcttctggcgatctttagcttctgatga 1900581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 13 - 265
Target Start/End: Complemental strand, 32786018 - 32785767
Alignment:
Q  13 gagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcct 112  Q
    |||||||||||  |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||| || ||||||||||||||||||| |||||||    
T  32786018 gagacaaaaacatagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttttaagaacaagcatccaatgccttcaaatcct 32785919  T
Q  113 tccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatg 212  Q
    | |||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||| |||| | ||||| ||||||| ||||||||||||||||    
T  32785918 ttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatcca-tgaacaacctttgaagctttaagtcttgcatctcatg 32785820  T
Q  213 atgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||| || | ||||||||||| |||||||||  |||||||||||||| ||||    
T  32785819 atgaactacaacttctagtgattttcagcttctaatgaacttgcttctaatga 32785767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 12 - 261
Target Start/End: Complemental strand, 22427439 - 22427192
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  ||||||| ||| || ||||||||||||||||||| ||||||    
T  22427439 agagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgcttttttaagaacaagcatccaatgccttcaaatcc 22427340  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||| |||||| || |||| |||||||   | ||||||||| |    
T  22427339 tttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatctattgaacagtctttgaagcttt--atgttgcatctcct 22427242  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctg 261  Q
    |||||| | |||||||| ||||| ||||||||| ||||||||||||||||    
T  22427241 gatgaactggagcttctggtgattttcagcttctgatgaacttgcttctg 22427192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 28492486 - 28492233
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  ||||||| ||  || ||||||||||||||||||| ||||||    
T  28492486 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctattcaaagaacaagcatccaatgccttcaaatcc 28492387  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| |||||||||| ||||||||||||||||| ||||| ||||||||||||||| | ||||| ||||||| ||||||||||||| |    
T  28492386 tttcaaaatagttgttgcttcactcttctagtcttctgcaatgcttagacgatattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 28492287  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || | |||||   ||||||||||||| ||||||||||||||||||||    
T  28492286 gatgaactacaacttctgaagatcttcagcttctgatgaacttgcttctgatga 28492233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 38282565 - 38282802
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| ||||||||||| |||||||||| |||||||||  |||||||||||||| ||||||||| ||||||||||||||||    
T  38282565 agagacaaaaacagagtagtggagatagtggttgta-acttcgtacaattgtactttgtcaacgctctttgaagaacaagcattcaatgcctttaaatcc 38282663  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||  ||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||| | ||||| ||||||| ||||||||||||| |    
T  38282664 tttcaaaatacccgttgcttcactcttccagtcttctgcgatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 38282763  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |||||||| | |||||||| ||| || |||||    
T  38282764 gatgaactagagcttttggtgatctttagcatctgatga 38282802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 33256433 - 33256208
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  |||||| |||  || ||||||||||||||||||| ||||||    
T  33256433 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaacaagcatccaatgccttcaaatcc 33256334  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||  ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||||| ||||||||||||| |    
T  33256333 ttttaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 33256234  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    | |||| |  ||||||| ||||||||    
T  33256233 gttgaactttagcttctggtgatctt 33256208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 33276605 - 33276380
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  |||||| |||  || ||||||||||||||||||| ||||||    
T  33276605 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaacaagcatccaatgccttcaaatcc 33276506  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||  ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||||| ||||||||||||| |    
T  33276505 ttttaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 33276406  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    | |||| |  ||||||| ||||||||    
T  33276405 ggtgaactttagcttctggtgatctt 33276380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 12 - 238
Target Start/End: Original strand, 22153855 - 22154081
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||  ||||||||||  || ||||| |||||||||| || ||||||    
T  22153855 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaatcatccaatgctttcaaatcc 22153954  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| |||| |||| |||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||| ||||||||||||| |    
T  22153955 tttcaaattagttgttgcttcactattctagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatctcct 22154054  T
Q  212 gatgaaatagagcttctagtgatcttc 238  Q
    |||||| |  ||||||| |||||||||    
T  22154055 gatgaacttcagcttctggtgatcttc 22154081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 20954547 - 20954317
Alignment:
Q  20 aaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaa 119  Q
    ||||| |||||||||| |||||||||||||||| ||||| |||||||||  ||||||||||  || || |||| |||||||| || |||||||| |||||    
T  20954547 aaactgagtagtggagatagtggttgtacacttggtacaattgtactttgtcaacgctcttcaaagaataagcctccaatgctttcaaatcctttcaaaa 20954448  T
Q  120 tagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaat 219  Q
    | | | ||| ||||||||||| |||||||||||||||| ||||||||||||||||||||| | ||||| ||||||| ||||||||||||| ||||||| |    
T  20954447 tggccattgcttcactcttcctgtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaact 20954348  T
Q  220 agagcttctagtgatcttcagcttcagatga 250  Q
    ||||||||| ||||||||||||||| |||||    
T  20954347 agagcttctggtgatcttcagcttctgatga 20954317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 26 - 250
Target Start/End: Original strand, 35401821 - 35402043
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    ||||||||||||||||||||||||||| ||||| |||||||||  |||||||||||||| ||||||||||||||||||| |||||||| |||||||||||    
T  35401821 agtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcg 35401920  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| |||||| ||||||||||||| | || ||  |||||||||||||||||||| || |||| ||||||| ||||||||||||  |||||  | | ||||    
T  35401921 ttgcttcacttttccagtcttctgtattgtttaaacgagattaaatccattgaacagtctttgaagctttaagtcttgcatcttctgatg--agacagct 35402018  T
Q  226 tctagtgatcttcagcttcagatga 250  Q
    ||| ||||||||||||||| |||||    
T  35402019 tctggtgatcttcagcttctgatga 35402043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 16235378 - 16235127
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    |||||||||||   ||||||||||||||| ||||||||||||||||| |||||||||  |||| ||||||| | ||||||||| ||||||||| ||||||    
T  16235378 agagacaaaaaaggagtagtggaggtagttgttgtacacttcgtacaattgtactttgtcaacactctttggagaacaagcattcaatgccttcaaatcc 16235279  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||| ||||||||||||||| || || |||||||||||||| |||||| | ||||| ||| ||| | |||||||||| ||    
T  16235278 tttcaaaatagtcgttgcttcacttttccagtcttctgcattgtttagacgagattaaatcaattgaacaacctttgaagttttaaatcttgcatcttat 16235179  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||| | |   ||||| ||||||||||||||| ||||||||| ||||||||||    
T  16235178 gatgagacaa--cttctggtgatcttcagcttctgatgaacttacttctgatga 16235127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 16 - 265
Target Start/End: Complemental strand, 39201070 - 39200823
Alignment:
Q  16 acaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttcc 115  Q
    ||||||||  ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||||| ||| |||||||| |    
T  39201070 acaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgtcttcaaatcctttc 39200971  T
Q  116 aaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatg 215  Q
    ||| ||| ||||| ||||||||| ||||||||||||||||||  | |||||||||||||||||| ||| ||| |||||||   | ||||||||| | |||    
T  39200970 aaactagccgttgcttcactctttcagtcttctgcaatgcttacatgagattaaatccattgaacagcttttgaagcttt--atgttgcatctcctaatg 39200873  T
Q  216 aaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    || |  ||||| | ||||| ||||||||  ||||||||||||| ||||||    
T  39200872 aactgcagcttttggtgattttcagcttttgatgaacttgcttttgatga 39200823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 1577865 - 1578090
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||| ||||| || ||||||  ||||||||||  || |||||||||||||||| || |||| |    
T  1577865 agagacacaaactgagtagtggagatagtggttgtacacttagtacaattatactttgtcaacgctcttaaaagaacaagcatccaatgctttcaaattc 1577964  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||| | ||||| ||||| | ||||||||||||| |    
T  1577965 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatctattgaacaacctttgaagctctaagtcttgcatctcct 1578064  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    ||| || |  ||||||| ||||||||    
T  1578065 gataaactttagcttcttgtgatctt 1578090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 12 - 209
Target Start/End: Original strand, 19717522 - 19717719
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| | | |||||| |||| ||||||||||||||||| |||||||||  ||||||||||  || ||||||||||| ||||||| ||||||    
T  19717522 agagacacaaactgatttgtggagttagttgttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccgatgccttcaaatcc 19717621  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctc 209  Q
    || |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||| | ||||| ||||||| |||||||||||||    
T  19717622 tttcaaaatagtcgttgcttcactcttccagtcctctgcaatgcttcgacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctc 19717719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 23036603 - 23036373
Alignment:
Q  18 aaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaa 117  Q
    |||||| |||||| ||||||||||||||||||||||||||| |||| ||||    |||||||||||| ||||||||||||||| ||| |||||||| |||    
T  23036603 aaaaacaaagtagaggaggtagtggttgtacacttcgtacaattgttctttgttgacgctctttgaagaacaagcatccaatgtcttcaaatcctttcaa 23036504  T
Q  118 aatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaa 217  Q
    |||||| ||||||||||| ||  ||||||||||| |  || ||||||||||||||||||||||||||||| ||||||| ||||||||||||  |||||      
T  23036503 aatagttgttgtttcacttttttagtcttctgcattatttagacgagattaaatccattgaatagcctttgaagctttaagtcttgcatcttctgatg-- 23036406  T
Q  218 atagagcttctagtgatcttcagcttcagatga 250  Q
    | | ||||||| ||||||||||||||| |||||    
T  23036405 agacagcttctggtgatcttcagcttctgatga 23036373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 12 - 261
Target Start/End: Complemental strand, 22464891 - 22464643
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    |||||||||||   ||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||| |||||     
T  22464891 agagacaaaaatagagtagtggaggtagtggatgtacacttcgtacacttgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatca 22464792  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatctca 210  Q
    || |||| ||||||||| |||||| ||||||||||||||||||||| || |||||||||||| ||||| | || ||| |||||||   | || ||||||     
T  22464791 tttcaaattagtcgttgcttcacttttccagtcttctgcaatgcttagatgagattaaatccgttgaacaaccttttgaagcttt--atgttacatctcc 22464694  T
Q  211 tgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctg 261  Q
    ||||||| |  ||| ||| ||||| |||||||||  |||||||||||||||    
T  22464693 tgatgaactgtagcatctggtgattttcagcttcttatgaacttgcttctg 22464643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 36134188 - 36134438
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||||| ||| ||||||    
T  36134188 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatg-cttcaaatcc 36134286  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| | |||| ||||||||||||||| || || || |||||||||||||||||| | ||||| || |||| ||||||| ||||  |    
T  36134287 tttcaaaatagttgttgctccacttttccagtcttctgcattgtttagatgagattaaatccattgaacaacctttgaaactttaagtcttgtatcttct 36134386  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||  | | ||||||| ||||||||||||||| | || |  ||||||||||||    
T  36134387 gatg--agacagcttctggtgatcttcagcttctggtggagatgcttctgatga 36134438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 12 - 236
Target Start/End: Original strand, 48704202 - 48704426
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||| | ||||||||||  | ||||||||||||||||||| |||||||||  ||||| ||||  || |||||||||||| |||||| ||||||    
T  48704202 agagacataaattgagtagtggagacattggttgtacacttcgtacaattgtactttgtcaacgttcttcaaagaacaagcatccagtgccttcaaatcc 48704301  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||| | ||||| ||||||| ||||||||||||  |    
T  48704302 tttcaaaatagttgttgtttcactcttccagtcttctgcattgcttaaacgagattaaatccattgaacaacctttgaagctttaagtcttgcatcttct 48704401  T
Q  212 gatgaaatagagcttctagtgatct 236  Q
    |||||| |  ||||||| |||||||    
T  48704402 gatgaactttagcttctggtgatct 48704426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 12 - 195
Target Start/End: Original strand, 2267087 - 2267270
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||||||||||||||||||||| |||| ||| |||||  |||||||||||||| ||||| ||||||||||||| |||| |    
T  2267087 agagacaaaaacatagtagtggaggtagtggttgtacacttcatacaattgcactttgacaacgctctttgaagaacaaacatccaatgccttcaaattc 2267186  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagcttt 195  Q
    || |||| |||| |||| |||||| ||||||||||||||||||||| ||||||||||||||||||||| | ||||| |||||||    
T  2267187 tttcaaactagttgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagcttt 2267270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 2268529 - 2268748
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||| |||||||||||||||||||||||||| |||||||||  |||||||||||||  ||||||||| ||||||||| |||||     
T  2268529 agagacaaaaacagagtagtcgaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgacgaacaagcattcaatgccttcaaatca 2268628  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||   |||| || |||||||||||||||| ||||| || ||||||||||||||||||||| | ||||| |||| || ||||||||||||| |    
T  2268629 tttcaaaata---gttgcttaactcttccagtcttctacaatgattagacgagattaaatccattgaacaacctttgaagccttaagtcttgcatctcct 2268725  T
Q  212 gatgaaatagagcttctagtgat 234  Q
     ||||| |  |||||||||||||    
T  2268726 aatgaactttagcttctagtgat 2268748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 12 - 216
Target Start/End: Complemental strand, 22201818 - 22201614
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||   | ||||||||||||||||||| ||||||    
T  22201818 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcatagaacaagcatccaatgccttcaaatcc 22201719  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| || ||| || |||||||||||||||||| ||||||||||||| ||||||  |||||||   ||||| ||||||||||||| |    
T  22201718 tttcaaaatagttgttgctttactttttcagtcttctgcaatgcttagacgagattaaatgcattgagcagcctttgtcgctttaagtcttgcatctcct 22201619  T
Q  212 gatga 216  Q
    |||||    
T  22201618 gatga 22201614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 29215795 - 29216031
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| ||||| |||||||||||||||| |||||||||   | ||||||||||| ||||||||||||||||||| ||||||    
T  29215795 agagacaaaaacagagtagtggagctagtgattgtacacttcgtacaattgtactttgttatcgctctttgaagaacaagcatccaatgccttcaaatcc 29215894  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| ||| ||||| |||||| ||| |||||| |||||||||| |||||||||||||||||| || | ||||| ||||||| ||  ||||||||| |    
T  29215895 tttcaaactagccgttgcttcacttttctagtcttttgcaatgcttagacgagattaaatccattaaacaacctttgaagctttaag--ttgcatctcct 29215992  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |  | ||||| ||||| ||||||||| |||||    
T  29215993 gatgaattgcaacttctggtgattttcagcttctgatga 29216031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 10757419 - 10757671
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||||| |||||||||  ||| ||||||  || ||||| |||||||||| || ||||||    
T  10757419 agagacacaaactgagtagtgaagatagtggttgtacacttcgtacaattgtactttgtcaatgctcttcaaagaacaatcatccaatgctttcaaatcc 10757518  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatctca 210  Q
    || ||||||||| |||| ||||||||||   | ||||||||||||| ||||||||||||||||||||| | || ||| ||||||| |||||||||||||     
T  10757519 tttcaaaatagttgttgcttcactcttctgattttctgcaatgcttagacgagattaaatccattgaacaaccttttgaagctttaagtcttgcatctcc 10757618  T
Q  211 tgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||| |  ||||| |  |||||||  ||||| |||||||||||| |||||||    
T  10757619 tgatgaacttcagcttttgatgatctt--gcttctgatgaacttgctcctgatga 10757671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 12 - 254
Target Start/End: Original strand, 12284421 - 12284661
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| | |||||||| ||||| |||||||||||||||| ||||||| |  ||||||||||  || |||||||||||||||| || ||||||    
T  12284421 agagacacaaactgattagtggagatagtgtttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 12284520  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| ||||||| ||  ||||| |||||||||| ||||||||| ||||||||||| | ||||| ||||| | ||||||||||||  |    
T  12284521 tttcaaaatagtcgttgcttcactcctctggtcttttgcaatgcttggacgagattgaatccattgaacaacctttgaagctctaagtcttgcatcttct 12284620  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaactt 254  Q
    |||||| |  ||||||| ||||||||  ||||| |||||||||    
T  12284621 gatgaacttcagcttctggtgatctt--gcttctgatgaactt 12284661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 25448648 - 25448395
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||   |||||||  |||||||||||||| || |||||||||||||||| ||||||    
T  25448648 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcc 25448549  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||||| || |||||| |||||||||||||||||  || |||||| || ||||| || || ||| ||| ||||||| ||  ||||||||  |    
T  25448548 tttcaaaatagtcgctgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacagcttttgaagctttaag--ttgcatcttct 25448451  T
Q  212 gatgaaat--agagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |    |||||||||||||  |||||||| ||| ||||||||| ||||||    
T  25448450 gatgaactgcgcagcttctagtgattctcagcttctgataaacttgcttttgatga 25448395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 48570313 - 48570063
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || ||||||||||||||||| |||||    
T  48570313 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttttaatcc 48570214  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    |||||||||||||||||||  ||| ||| ||||||||||||| ||| |||||| || ||||| || || ||| ||| || |||| ||  ||||||||| |    
T  48570213 ttccaaaatagtcgttgttatacttttctagtcttctgcaat-cttagacgagtttgaatccgttaaacagcttttgaaactttaag--ttgcatctcct 48570117  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || ||||||| |||||  |||||||| ||| || |||||| ||||||    
T  48570116 gatgaattacagcttctggtgattctcagcttctgataaaattgcttatgatga 48570063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 35040164 - 35040415
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||   |||||||  |||||||||||||| | |||||||||||||| || ||||||    
T  35040164 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagatcaagcatccaatgctttcaaatcc 35040263  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| || ||| ||| |||||||||||||  || |||||| ||  ||||||| || | | ||| |||| || ||  ||||||| |||    
T  35040264 tttcaaaatagtcgttgctttacttttctagtcttctgcaatctttagacgaggttggatccattaaacaacttttgaagccttaag--ttgcatcccat 35040361  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| ||||| ||  ||||| ||| ||||||||||||||||    
T  35040362 gatgaattgcagcttctggtgatttttggcttctgataaacttgcttctgatga 35040415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 26 - 265
Target Start/End: Original strand, 2834702 - 2834938
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    ||||||||||| |||||||||||| |||||||| | |||||||  ||||| |||||||| ||||||||||||||||||| |||||||| |||| ||| ||    
T  2834702 agtagtggaggcagtggttgtacaattcgtacaatcgtactttgtcaacgttctttgaagaacaagcatccaatgccttcaaatcctttcaaattagccg 2834801  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| |||||| || ||||||||  |||||||| ||||||||| ||||||||||| | | ||  ||||||| ||  |||||||||  |||||| |  ||||    
T  2834802 ttgcttcactttttcagtcttcaacaatgcttagacgagattgaatccattgaacaactttggaagctttaag--ttgcatctcccgatgaactgcagct 2834899  T
Q  226 tctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||| ||||| |||||||||  ||| |||||||||||||||    
T  2834900 tctggtgattttcagcttctaatg-acttgcttctgatga 2834938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 12 - 269
Target Start/End: Complemental strand, 26702211 - 26701954
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||  || | |||||  |||| |||| |||||||||||| || | |    
T  26702211 agagacacatactaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcatcactcttcaaaaagcaagaatccaatgccttcaacttc 26702112  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
     |   || || | |||| |||||||| |  |||||||||||||||   |||||||| |||||||  || ||||||| ||||||| |||||  |||||  |    
T  26702111 atttgaattaattgttgcttcactctcctggtcttctgcaatgctcaaacgagattgaatccatataacagcctttgaagctttaagtctcccatcttct 26702012  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatgatgtc 269  Q
    |||||| |  ||||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  26702011 gatgaactttagcttctggtgatcttcagtttctgatgaacttgcttctgatgatgtc 26701954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 26 - 250
Target Start/End: Original strand, 7309831 - 7310054
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||| |||||||||||||||||||||||||||| |||||||     |||||| |||||| ||| ||||||||||||||| |||||| | ||||||   ||    
T  7309831 agtattggaggtagtggttgtacacttcgtacaattgtactacgttaacgct-tttgaagaacgagcatccaatgccttcaaatccctacaaaatgaccg 7309929  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| |||||||||  ||||||||||||| ||| ||||| | | ||||||||||| ||| ||| ||||||| ||||||||||||| ||||||  |  ||||    
T  7309930 ttgcttcactcttatagtcttctgcaatccttagacgacactgaatccattgaacagcttttgaagctttaagtcttgcatctcctgatgagctttagct 7310029  T
Q  226 tctagtgatcttcagcttcagatga 250  Q
    | | ||||||||||||||| |||||    
T  7310030 tatggtgatcttcagcttctgatga 7310054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 26 - 174
Target Start/End: Complemental strand, 14263519 - 14263371
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||||||||||||||||||||||||||   || |||| ||||||||||||||  |||||| |||||||||||| |||||||| |||||||||||    
T  14263519 agtagtggaggtagtggttgtacacttcgtacaaacgtgctttgccaacgctctttgaggaacaagtatccaatgccttcaaatcctttcaaaatagtcg 14263420  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatcca 174  Q
    ||||||  ||  |||||||||||||||| ||| |||| |||| ||||||    
T  14263419 ttgttttgcttctccagtcttctgcaatccttagacgggatttaatcca 14263371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 21028791 - 21029044
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||| |||||||||| |||| |||||||||  || |||||||  |||| ||||||||||||||||| || | |    
T  21028791 agagacacaaactgagtagtggagatagtggctgtacacttcatacaattgtactttgtcagcgctcttcaaaaagcaagcatccaatgccttcaacttc 21028890  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
     |   || ||||||||| |||||||||   |||||||||||||||| || |||||||||| ||||||| | | | | ||||||| |||||  ||| |  |    
T  21028891 atttgaattagtcgttgcttcactcttatggtcttctgcaatgcttggatgagattaaattcattgaacaacatatgaagctttaagtctctcatattct 21028990  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
     |||| ||  ||||||| ||||||||||||||| ||||||||||||| ||||||    
T  21028991 aatgatattcagcttctggtgatcttcagcttctgatgaacttgcttttgatga 21029044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 21191950 - 21191805
Alignment:
Q  9 agaagagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaa 108  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||  || ||||||||||||||||||| |||    
T  21191950 agaagagacacaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgccaacgctcttcaaagaacaagcatccaatgccttcaaa 21191851  T
Q  109 tccttccaaaatagtcgttgtttcactcttccagtcttctgcaatg 154  Q
    |||||   || |||  |||| ||||||||||  |||||||||||||    
T  21191850 tccttttgaattagctgttgcttcactcttctggtcttctgcaatg 21191805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 44821627 - 44821376
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| |||| |||||||||||||||||   ||||| |  |||| ||||||||| || |||||| ||| ||||| ||||||    
T  44821627 agagacaaaaacagagtagtggagatagtagttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataagcatacaaagccttcaaatcc 44821528  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||||||||||||||||| |  ||| || ||||||||| |||  ||| |||||| || ||||| || || | | ||| ||||||| ||  ||||||||| |    
T  44821527 ttccaaaatagtcgttgctatactttttcagtcttctacaaaccttagacgagtttgaatcctttaaacaacttttgaagctttaag--ttgcatctcct 44821430  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || ||||| | |||||  |||||||| ||| ||||||||||||||||    
T  44821429 gatgaactacagcttatggtgattctcagcttctgataaacttgcttctgatga 44821376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 265
Target Start/End: Complemental strand, 17025039 - 17024796
Alignment:
Q  19 aaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaa 118  Q
    ||||| ||| |||||||||||||||||||||||||||||| ||||  |||| ||||||||||| || ||||||||||||||||||| ||||||||   ||    
T  17025039 aaaacaaagaagtggaggtagtggttgtacacttcgtacaattgtcatttttcaacgctctttaaagaacaagcatccaatgccttcaaatccttttgaa 17024940  T
Q  119 atagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaa 218  Q
     ||||||||| |||||||||   ||||| ||||||| | || || |||||||||| ||||| || | || ||||||| | |||  || ||  ||||||      
T  17024939 ttagtcgttgcttcactcttatggtcttttgcaatgttatg-cgtgattaaatcctttgaacagacattgaagctttaattctctcagcttctgatgatc 17024841  T
Q  219 tagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |  ||||||| ||||| ||  ||||| ||||||||||||||||||||    
T  17024840 ttcagcttctggtgatgtt--gcttctgatgaacttgcttctgatga 17024796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 2327522 - 2327270
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctc-tttgaaaaacaagcatccaatgcctttaaatc 110  Q
    |||||||||| |  |||||||||||||||||||||||||||||||||   |||||||  ||| |||| |||||  |||||||||||||||| ||  ||||    
T  2327522 agagacaaaaccagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctcttttgaggaacaagcatccaatgcgttcgaatc 2327423  T
Q  111 cttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctca 210  Q
    ||| |||||||||  ||| |||||| || ||||| ||||||||  || |||||| || |||| ||| || | | ||| ||||||| ||  |||||||||     
T  2327422 ctttcaaaatagtttttgcttcactttttcagtcatctgcaatctttagacgagtttgaatctattaaacaacttttgaagctttaag--ttgcatctcc 2327325  T
Q  211 tgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||| |  ||||||| ||||| ||  ||||| ||| ||||||||||||||||    
T  2327324 tgatgaactgcagcttctggtgatttttggcttctgataaacttgcttctgatga 2327270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 21702812 - 21703062
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || |||||| ||||||| || |||||    
T  21702812 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcattcaatgcccttcaatcc 21702911  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||| ||||| |  ||| ||| ||||||||||||| ||| |||||| || ||||| |  || |   ||| ||||||| ||  ||||||||| |    
T  21702912 tttcaaaatagccgttgctatacttttcaagtcttctgcaat-cttagacgagtttgaatccttgaaacaaattttgaagctttaag--ttgcatctcct 21703008  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| |||||   ||||||| |||| |||||||||||||||    
T  21703009 gatgaactgcagcttctggtgattcacagcttctgatgtacttgcttctgatga 21703062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 30893090 - 30893296
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||| |  || |||| ||  || |||||||||| | ||| || ||||||    
T  30893090 agagacacaaacttagtagtggagatagtggttgtacacttcgtacaattgtactatgtcagcgctattcaaagaacaagcatctagtgctttcaaatcc 30893189  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatctca 210  Q
    || |||||||| | ||| ||||||| ||   |||| |||||||||| ||||||||| |||||| |||| | || ||| || |||| |||||||||||||     
T  30893190 tttcaaaatagcctttgcttcactcctctgatcttttgcaatgcttggacgagattgaatccaatgaacaaccttttgaaactttaagtcttgcatctcc 30893289  T
Q  211 tgatgaa 217  Q
    |||||||    
T  30893290 tgatgaa 30893296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 12613896 - 12613753
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||  ||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||  || |||||||| ||||||| || |||| |    
T  12613896 agagacacaaacagagtagtgaaggtagtggttgtacacttcgtacaattgtactttgccaacgctcttcaaagaacaagcaaccaatgctttcaaat-c 12613798  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgct 156  Q
    ||   || ||| ||||| ||||||||||  |||||||||||||||    
T  12613797 ttttgaattagccgttgcttcactcttctggtcttctgcaatgct 12613753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 46088987 - 46089229
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || |||||||||||||||||          
T  46088987 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt------ 46089080  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
       ||||||||||||||    ||| |||||||||||||||||  || | |||| || ||||| |  || ||| ||| ||||||| ||  |||||||||||    
T  46089081 ---caaaatagtcgttgccatacttttccagtcttctgcaatttttaggcgagtttgaatccttgaaacagcttttgaagctttaag--ttgcatctcat 46089175  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| |||||   || |||  ||||||||||||||||||||    
T  46089176 gatgaactgcagcttctggtgatacacaacttatgatgaacttgcttctgatga 46089229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 30572199 - 30572336
Alignment:
Q  16 acaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttcc 115  Q
    ||||||||  |||||||||| |||||||||||||||||||||| | ||||| |  ||||||||||  || || || |||||||||| ||| ||||||| |    
T  30572199 acaaaaacagagtagtggagatagtggttgtacacttcgtacaatcgtactatgtcaacgctcttctaagaataaacatccaatgcttttcaatcctttc 30572298  T
Q  116 aaaatagtcgttgtttcactcttccagtcttctgcaat 153  Q
    ||||||| ||||| |  ||| |||||||||||||||||    
T  30572299 aaaatagccgttgctatacttttccagtcttctgcaat 30572336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 18896672 - 18896537
Alignment:
Q  19 aaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaa 118  Q
    ||||| ||||||||||||||||||||||||||||||||||  ||| ||||||||||| |||   || |  |||||||||||||||| |||| |||   ||    
T  18896672 aaaacaaagtagtggaggtagtggttgtacacttcgtacaactgtccttttccaacgttctccaaagactaagcatccaatgccttcaaattcttttgaa 18896573  T
Q  119 atagtcgttgtttcactcttccagtcttctgcaatg 154  Q
     ||| ||||| |||   |||| ||||||||||||||    
T  18896572 ttagccgttgcttcttgcttctagtcttctgcaatg 18896537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 21121146 - 21121057
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||||||||  ||||||||| ||||||||||||||| |||||||   ||||| |  |||||||||||||| || |||||||||||||    
T  21121146 agagacaaaaacagagtagtggaagtagtggttgtacacgtcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 21121057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 42284642 - 42284715
Alignment:
Q  28 tagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    |||||||||||||||||||||||||||||||   ||||| |  |||||||||||||| || |||||||||||||    
T  42284642 tagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaaaaagcatccaatgc 42284715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 258
Target Start/End: Original strand, 10250984 - 10251218
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| || |||||||||||||||||||   ||||| |  |||  ||||||||| || ||||||||||||         ||    
T  10250984 agagacaaaaacagagtagtggagataatggttgtacacttcgtacaaacgtactatgtcaaaactctttgaagaataagcatccaatg---------cc 10251074  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||||||| ||| |||||||  ||| ||||||||||||||||| ||| |||||| || ||||| || || | | ||| ||||||| ||  ||||||||| |    
T  10251075 ttccaaattagccgttgttatacttttccagtcttctgcaat-cttagacgagtttgaatcctttaaacaacttttgaagctttaag--ttgcatctcct 10251171  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgctt 258  Q
    |||||| |  ||||||| |||||    |||||| |||||||||||||    
T  10251172 gatgaactgcagcttctggtgattcatagcttctgatgaacttgctt 10251218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 21984608 - 21984683
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||||| |||||||||||||||||||||||   ||||| |  |||||||||||||| || |||||||||||||    
T  21984608 agtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 21984683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 21135242 - 21135153
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||||||||  |||||||||  ||||||||||||||||||||||   ||||| |  |||| ||||||||| || |||||||||||||    
T  21135242 agagacaaaaacagagtagtggatttagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgc 21135153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 37642246 - 37642335
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||| |   ||||| |  |||||||||||||| ||  ||||||||||||    
T  37642246 agagacaaaaacagagtagtggaagtagtggttgtacacttcgtataaacgtactatgtcaacgctctttgaagaattagcatccaatgc 37642335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 7745158 - 7745066
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaa 118  Q
    ||||||||||||||||||||||||||| ||| |   |||||||  ||||||||||||||  | ||||||| ||||| || |||||||| ||||    
T  7745158 agtagtggaggtagtggttgtacactttgtataaacgtactttgtcaacgctctttgaaggataagcatcaaatgcattcaaatcctttcaaa 7745066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 17371042 - 17371085
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtac 57  Q
    ||||||||||  ||||||||||||||||||||||||||||||||    
T  17371042 agacaaaaacagagtagtggaggtagtggttgtacacttcgtac 17371085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 21204991 - 21204916
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||||| |||||||||||||||||||||||   ||||| |  |||||||||||||| ||  | ||||||||||    
T  21204991 agtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaattaacatccaatgc 21204916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 9050570 - 9050532
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  9050570 agacaaaaacagagtagtggaggtagtggttgtacactt 9050532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 12946840 - 12946878
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  12946840 agacaaaaacagagtagtggaggtagtggttgtacactt 12946878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 18381986 - 18381948
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  18381986 agacaaaaacagagtagtggaggtagtggttgtacactt 18381948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 19215610 - 19215656
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtaca 58  Q
    ||||||||||||  ||||||| || ||||||||||||||||||||||    
T  19215610 agagacaaaaacagagtagtgcagatagtggttgtacacttcgtaca 19215656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 23024786 - 23024832
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtaca 58  Q
    ||||||||||||  ||||||| || ||||||||||||||||||||||    
T  23024786 agagacaaaaacagagtagtgcagatagtggttgtacacttcgtaca 23024832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 35013047 - 35013085
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  35013047 agacaaaaacagagtagtggaggtagtggttgtacactt 35013085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 20441398 - 20441361
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  20441398 gacaaaaacagagtagtggaggtagtggttgtacactt 20441361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 39587095 - 39587132
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  39587095 gacaaaaacagagtagtggaggtagtggttgtacactt 39587132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 47195387 - 47195424
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  47195387 gacaaaaacagagtagtggaggtagtggttgtacactt 47195424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 158; Significance: 4e-84; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 32544264 - 32544517
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| || || ||||||||||||||||||||    
T  32544264 agagacagaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataaacatccaatgcctttaaatcc 32544363  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||||| ||||||||||||| |    
T  32544364 tttcaaaatagacgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 32544463  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |||||||| | ||||| ||||||||| ||||||||||| ||||||||    
T  32544464 gatgaactagagcttatggtgattttcagcttctgatgaacttgcatctgatga 32544517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 12 - 260
Target Start/End: Original strand, 18435555 - 18435803
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||   ||| |||||||||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||||||||||| ||||||    
T  18435555 agagacaaaaacagtgtactggaggtagtggttgtacactttgtacacttgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 18435654  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||| ||| |||||| || ||| ||| ||||||||||||||||||||||| ||||  ||||||| ||||||||||||| |    
T  18435655 tttcaaaatagtcgttgcttcacttttctagtcttttgaaattcttagacgagattaaatccattgaataaccttcaaagctttaagtcttgcatctcct 18435754  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttct 260  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||    
T  18435755 gatgaactagagcttctagtgatcttcagcttctgatgaacttgcttct 18435803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 9717842 - 9718067
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| |||||||||| |||||||||||||||    
T  9717842 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatcaaatgcctttaaatcc 9717941  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| ||||||||||||||||||| ||||| || ||||||||||||||||||||| | ||||| ||||||| ||||||||||||| |    
T  9717942 tttcaaaatagttgttgcttcactcttccagtcttctacaatgtttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 9718041  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    |||||| |||||||||||||||||||    
T  9718042 gatgaactagagcttctagtgatctt 9718067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 12 - 260
Target Start/End: Complemental strand, 26972376 - 26972130
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||| ||| |||||||||||||||||||||||||||||  || |||||||||  |||||||||||||| ||||| ||||||||||||||||||||    
T  26972376 agagacaaatactgagtagtggaggtagtggttgtacacttcg--caattgtactttgtcaacgctctttgaagaacaaacatccaatgcctttaaatcc 26972279  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| |||||||||| ||||||||||||||||| ||||||||||||||||||||| | | ||| ||||||| ||||||||||||| |    
T  26972278 tttcaaaatagttgttgcttcactcttcaagtcttctgcaatgcttagacgagattaaatccattgaacaacatttgaagctttaagtcttgcatctcct 26972179  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttct 260  Q
    ||||||||||||||||| ||||| ||| ||||| |||||||||||||||    
T  26972178 gatgaaatagagcttctggtgattttctgcttctgatgaacttgcttct 26972130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 15531774 - 15531549
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||| ||  ||||||||||||||||||||||| ||||||||| |||||||||  |||||||||||||| ||||||||||||||||||| ||||||    
T  15531774 agagacaaagacagagtagtggaggtagtggttgtacgcttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 15531675  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||  |||||||| ||||||| ||||||||||||||||| ||||||||||||| ||||||| | ||||||||||||| ||||||||||||  |    
T  15531674 tttcaaaataaccgttgttttactcttctagtcttctgcaatgcttagacgagattaaattcattgaacaacctttcaagctttaagtcttgcatcttct 15531575  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    |||||| || | ||||| ||||||||    
T  15531574 gatgaactacaacttctggtgatctt 15531549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 20112850 - 20112596
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| ||||||||||||| |||||||| |||||||||  ||||||||||  || |||||||||||||||| || ||||||    
T  20112850 agagacacaaactgagtagtggagatagtggttgtacatttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 20112751  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatctca 210  Q
    || |||||||||||||| |||| |||||| |||||||||||||||| || |||||||||||||||||| | || ||| ||||||| |||||||||||||     
T  20112750 tttcaaaatagtcgttgcttcattcttccggtcttctgcaatgcttagaagagattaaatccattgaacaacctttttaagctttaagtcttgcatctct 20112651  T
Q  211 tgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||| |  ||||||  |||||||| |||||| || |||||||||||||||||    
T  20112650 tgatgaacttcagcttcaggtgatctttagcttctgaagaacttgcttctgatga 20112596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 22802140 - 22802391
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    |||||||||||   ||||||||||||||||||||||||||||||||| |||||||||   ||||||||||||| |||||||||||||||||||||||| |    
T  22802140 agagacaaaaatagagtagtggaggtagtggttgtacacttcgtacaattgtactttgttaacgctctttgaagaacaagcatccaatgcctttaaattc 22802239  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| | |||||||||||||| |||||||| |||||||||||| ||| | ||||||||||||||| | ||||| |||||||   | ||||||||| |    
T  22802240 tttcaaacttgtcgttgtttcacttttccagtcgtctgcaatgcttagacaatattaaatccattgaacaacctttgaagcttt--atgttgcatctcct 22802337  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || | ||||| ||||| ||||||||| ||||||||||||||| ||||    
T  22802338 gatgaactacaacttctggtgattttcagcttctgatgaacttgcttctaatga 22802391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 265
Target Start/End: Complemental strand, 20730853 - 20730603
Alignment:
Q  13 gagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcct 112  Q
    |||||||||||  || |||||||||||||||||||||||| ||||| |||||||||  |||||||||||||| ||||| ||||||||||||| |||||||    
T  20730853 gagacaaaaacagagcagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcct 20730754  T
Q  113 tccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatg 212  Q
    | |||| ||||||||| |||||| ||||||||||||||||| ||| || |||||||||||| ||||| ||||||| |||||||   | || |||||| ||    
T  20730753 ttcaaactagtcgttgcttcacttttccagtcttctgcaatacttagatgagattaaatcccttgaacagcctttgaagcttt--ttgttacatctcctg 20730656  T
Q  213 atgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||| |  ||||||||||||| ||||||||  ||||||||||||||||||||    
T  20730655 atgaactgcagcttctagtgattttcagcttatgatgaacttgcttctgatga 20730603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 265
Target Start/End: Original strand, 29918018 - 29918266
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcctt 113  Q
    ||||||||||  ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| ||||||||||  ||||||| ||||| ||    
T  29918018 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatctgatgccttcaaatcttt 29918117  T
Q  114 ccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatga 213  Q
     |||| ||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||| |||| | ||||| ||||||| ||||||||||||| |||    
T  29918118 tcaaactagtcgttgcttcacttttccaatcttctgcaatgcttagacgagattaaatcca-tgaacaacctttgaagctttaagtcttgcatctcctga 29918216  T
Q  214 tgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||| || |||||||  ||| |||  ||||| |||| |||||||||| ||||    
T  29918217 tgaactacagcttctgatgaactt--gcttctgatggacttgcttctaatga 29918266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 12715570 - 12715318
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||| ||||||||||||| |||||||||  ||||||||||  || || | |||| |||||| || |||||     
T  12715570 agagacacaaactgagtagtggagatagtggttctacacttcgtacaattgtactttgtcaacgctcttcaaagaataggcatacaatgctttcaaatca 12715471  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatctca 210  Q
    || |||||||||||||| ||||||||| || ||||||||||||||| ||||||||||||||||||||| |||| ||| ||||||| |||||||||||||     
T  12715470 tttcaaaatagtcgttgcttcactctttcaatcttctgcaatgcttagacgagattaaatccattgaacagccttttgaagctttaagtcttgcatctcc 12715371  T
Q  211 tgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||| || | ||||||||||||||  ||||| ||||||||| ||||||||||    
T  12715370 tgatgaactacaacttctagtgatctt--gcttctgatgaacttccttctgatga 12715318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 26 - 250
Target Start/End: Original strand, 13435545 - 13435769
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    ||||||||||||||||||||||||||||||||| |||||||||  ||||||| ||  || ||||| ||| |||||| || |||||||| |||||||||||    
T  13435545 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgcttttcaaagaacaatcattcaatgctttcaaatcctttcaaaatagtcg 13435644  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| |||||||||||| |||||||||||||||  |||||||||||||||||||| | ||||| ||||||| ||||||||||||| ||||||| |  ||||    
T  13435645 ttgcttcactcttccaatcttctgcaatgcttaaacgagattaaatccattgaaaatcctttgaagctttaagtcttgcatctcctgatgaacttcagct 13435744  T
Q  226 tctagtgatcttcagcttcagatga 250  Q
    | | ||||||||| ||||| |||||    
T  13435745 tatggtgatcttctgcttctgatga 13435769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 16265300 - 16265049
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||  |||||||||||||||||||| |||||||||||| |||||||||  |||||||||||||| |||||||||||||||| || ||| ||    
T  16265300 agagacacaaacagagtagtggaggtagtggttgcacacttcgtacaattgtactttctcaacgctctttgaagaacaagcatccaatgcattcaaaacc 16265201  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||  || |||||| |||||| |||||||| | |||||||||| || |||||||||||||||||| | |||||||||||||   | ||||||||| |    
T  16265200 tttcaatctactcgttgcttcacttttccagtcctgtgcaatgcttagatgagattaaatccattgaacaacctttcaagcttt--atgttgcatctctt 16265103  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    || ||| |  ||||||| ||||| ||||||||| ||||||||||||||||||||    
T  16265102 gacgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatga 16265049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 21625103 - 21625335
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttc 114  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| |||||||||   ||||||||||||| ||||||||| ||||||||| |||| |||     
T  21625103 gacaaaaacaaagtagtggagatagtggttgtacacttcgtacaattgtactttgttaacgctctttgaagaacaagcatgcaatgccttcaaatgcttt 21625202  T
Q  115 caaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgat 214  Q
    |||| ||| ||||| || ||||||||| ||||||||||||||| ||||||||||||||||||||| | ||||| ||||| | ||||||||||||| ||||    
T  21625203 caaa-tagccgttgctttactcttccaatcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctgtaagtcttgcatctcctgat 21625301  T
Q  215 gaaatagagcttctagtgatcttcagcttcagatga 250  Q
    || | |   ||||| ||||||||||||||| |||||    
T  21625302 gagacaa--cttctggtgatcttcagcttctgatga 21625335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 12 - 243
Target Start/End: Original strand, 13602171 - 13602402
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||| |||||||| |||| ||||| |||  ||||| ||||  || || |||||||||||||||| || ||     
T  13602171 agagacacaaactgagtagtggagatagtggttatacacttcttacaattgtattttgtcaacgttcttcaaagaataagcatccaatgccttcaattca 13602270  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| | ||||| ||||||| ||||||||||||| |    
T  13602271 tttcaaaatagtggttgcttcactcttccagtcttctgcaatgcttagacaagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 13602370  T
Q  212 gatgaaatagagcttctagtgatcttcagctt 243  Q
    |||||| || ||||||| ||||||||| ||||    
T  13602371 gatgaactatagcttcttgtgatcttcggctt 13602402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 14100576 - 14100385
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    ||||||||||||||||||||||||||||||| | |||||||||  ||||||||||| || || |||||||||||||||| |||||||| ||||||||| |    
T  14100576 agtagtggaggtagtggttgtacacttcgtataattgtactttgtcaacgctctttaaagaagaagcatccaatgccttcaaatcctttcaaaatagttg 14100477  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaa 217  Q
    ||  ||||||||||||||||||| |||||||| || |||||||||||||||||| | ||||| || |||| ||||||||||||| |||||||    
T  14100476 tttcttcactcttccagtcttctacaatgcttagatgagattaaatccattgaacatcctttgaaactttaagtcttgcatctcctgatgaa 14100385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 250
Target Start/End: Original strand, 23284564 - 23284801
Alignment:
Q  13 gagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcct 112  Q
    |||||| ||||| |||||||||| || ||||| ||||||||||||| |||||||||  ||||||||||  |  ||||||||| ||||||||| |||||||    
T  23284564 gagacacaaactgagtagtggagataatggttatacacttcgtacaattgtactttgtcaacgctcttcaaggaacaagcattcaatgccttcaaatcct 23284663  T
Q  113 tccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatg 212  Q
    | |||||||| ||||| |||||| |||  |||||||||||||||| ||||||||||||||||||||| | | ||| ||||||| ||||||||||||| ||    
T  23284664 ttcaaaataggcgttgcttcacttttctggtcttctgcaatgcttagacgagattaaatccattgaacaacatttgaagctttaagtcttgcatctcctg 23284763  T
Q  213 atgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    ||||| |  ||||||||| ||||||| ||||| |||||    
T  23284764 atgaacttcagcttctagcgatcttctgcttctgatga 23284801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 12 - 209
Target Start/End: Original strand, 15302199 - 15302396
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    |||||||  |||| |||||||||| |||||||||||||||| ||||| ||||||  |  ||||||||||  || ||||||||||||||||||||||||||    
T  15302199 agagacactaactgagtagtggagatagtggttgtacactttgtacaattgtacaatgtcaacgctcttcaaagaacaagcatccaatgcctttaaatcc 15302298  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctc 209  Q
    || |||||||| ||||| |||||| |||||||||||||||||| || ||||||||||||||||||||| | ||||| | ||||| |||||||||||||    
T  15302299 tttcaaaatagccgttgcttcacttttccagtcttctgcaatgtttagacgagattaaatccattgaacaacctttgacgctttaagtcttgcatctc 15302396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 9 - 265
Target Start/End: Original strand, 15954699 - 15954953
Alignment:
Q  9 agaagagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaa 108  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||   |||||||  |||||||||||||| ||||||||| ||||||||| |||    
T  15954699 agaagagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaataacaagcattcaatgccttcaaa 15954798  T
Q  109 tccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatct 208  Q
    ||||| |||| ||||||||| |||| | |||||||||||||||||  || || ||| || ||||| || || ||| ||| ||||||| ||  ||||||||    
T  15954799 tcctttcaaattagtcgttgcttcatttttccagtcttctgcaatctttagaagagtttgaatccgttaaacagcttttgaagctttaag--ttgcatct 15954896  T
Q  209 catgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    | ||||||| || ||||||| || ||  |||||||| ||| ||||||||||||||||    
T  15954897 cttgatgaactacagcttctggtaattctcagcttctgataaacttgcttctgatga 15954953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 19086157 - 19086399
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||| |  ||||||||||  || |||||||||||||||| ||           
T  19086157 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgcttt------- 19086249  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaat-agcctttcaagctttgagtcttgcatctca 210  Q
       |||||||||||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||||| |||| ||  |||||| |||||||||||||     
T  19086250 ---caaaatagtcgttgcttcactctcccagtcttctgcaatacttagacgagattaaatccattgaatcagccctt-gagctttaagtcttgcatctcc 19086345  T
Q  211 tgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||| |  ||||||| |||||||||||| || ||||||||||||||||||||    
T  19086346 tgatgaacttcagcttctggtgatcttcagc-tctgatgaacttgcttctgatga 19086399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 36 - 217
Target Start/End: Original strand, 19688789 - 19688968
Alignment:
Q  36 gtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcact 135  Q
    ||||||||| ||||||||||||| |||||||||  |||||||||||||| ||||| ||||||||||||| |||||||| |||||||||| ||| ||||||    
T  19688789 gtagtggttatacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaaatagtccttgcttcact 19688888  T
Q  136 cttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaa 217  Q
    |||||||| |||| |||||||| ||||||| ||||||||||||| | ||||| ||||||| ||||  ||||||| |||||||    
T  19688889 cttccagttttctacaatgcttggacgagaataaatccattgaacaacctttgaagctttaagtc--gcatctcctgatgaa 19688968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 18378313 - 18378480
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  || |||| |||||||||||||| ||||||    
T  18378313 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttatcaacgctcttcaaagaacatgcatccaatgccttcaaatcc 18378412  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaa 179  Q
    || ||||||||| |||| || |||||||||||||| |||||| ||| ||||||||| |||||||||||    
T  18378413 tttcaaaatagttgttgcttgactcttccagtcttttgcaatacttagacgagatttaatccattgaa 18378480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 15987232 - 15987414
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaat-c 110  Q
    ||||||| ||||| |||| ||||| |||||||||||||||||||||| |||||||||  ||||||||||  || ||||||||||||||||||| |||| |    
T  15987232 agagacacaaactgagtaatggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 15987331  T
Q  111 cttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagct 193  Q
    |||  ||||||||| ||| ||||||||||  |||||||||||||||| ||||||||||||||||||||| | ||||| |||||    
T  15987332 cttttaaaatagtcattgcttcactcttctggtcttctgcaatgcttagacgagattaaatccattgaacatcctttgaagct 15987414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 22076557 - 22076306
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||  |||||| |  |||||||||||||| || ||||||| ||||| ||  |||||    
T  22076557 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaatgtactatgtcaacgctctttgaagaataagcatcaaatgctttccaatcc 22076458  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||||||||||||||||| |  ||| ||| |||||||||||||  || |||||| |||||||| || || ||| ||| ||||||| ||  ||||||||| |    
T  22076457 ttccaaaatagtcgttgctatacttttcgagtcttctgcaatctttagacgagtttaaatcctttaaacagcttttaaagctttaag--ttgcatctcct 22076360  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || | ||||| |||||   ||||||| ||||||||||||||||||||    
T  22076359 gatgaactacatcttctggtgattcacagcttctgatgaacttgcttctgatga 22076306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 26 - 265
Target Start/End: Original strand, 21618257 - 21618494
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||||||||||||||||||||||||||   ||||| |  |||||||||||||| || |||||||||||||||| ||||||||||||||||||||    
T  21618257 agtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagtcg 21618356  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| || ||| |||||||||||| ||||  || || ||| || ||||| || || | | ||| ||||||| ||  ||||||||  ||||||| || ||||    
T  21618357 ttgctttacttttccagtcttctacaatctttagaagagtttgaatccgttaaacaacttttgaagctttaag--ttgcatcttctgatgaactacagct 21618454  T
Q  226 tctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||| |||||  |||||||| ||| ||||||||||||||||    
T  21618455 tctggtgattctcagcttctgataaacttgcttctgatga 21618494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 237
Target Start/End: Original strand, 19623980 - 19624203
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcctt 113  Q
    ||||| ||||| |||||||||| |||||||||||||||||||||| |||||||  |  ||||||||   || ||||| |||||||||| || ||||||||    
T  19623980 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactagtgtaacgctctccaaagaacaatcatccaatgctttcaaatcctt 19624079  T
Q  114 ccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatga 213  Q
     || ||||||||||| ||||||| ||  ||||| |||||||||| ||||||||| ||||||||||| | ||||| ||||||| || |||||||||| |||    
T  19624080 tcagaatagtcgttgcttcactcctctggtcttttgcaatgcttggacgagattgaatccattgaacaacctttgaagctttaagacttgcatctcctga 19624179  T
Q  214 tgaaatagagcttctagtgatctt 237  Q
    |||| |  ||||||| ||||||||    
T  19624180 tgaacttcagcttctggtgatctt 19624203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 24116827 - 24117033
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||| |  ||||||||||  || |||||||||||||||| || ||||||    
T  24116827 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 24116926  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatctca 210  Q
    || |||||||  || |  ||||||| ||  ||||| |||||||||| ||||||||| ||||||||||| |||| ||| ||||||| ||||||||||||      
T  24116927 tttcaaaataaccgctacttcactcctctggtcttttgcaatgcttggacgagattgaatccattgaacagccttttgaagctttaagtcttgcatcttc 24117026  T
Q  211 tgatgaa 217  Q
    |||||||    
T  24117027 tgatgaa 24117033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 43 - 265
Target Start/End: Complemental strand, 34451787 - 34451568
Alignment:
Q  43 ttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccag 142  Q
    |||||||||| ||||| |||||||||  ||||||| ||  || || | |||| |||||| || |||||||  |||| ||||||||| ||||||||| |||    
T  34451787 ttgtacactttgtacaattgtactttgtcaacgcttttcaaagaataggcatacaatgctttcaaatcctctcaaattagtcgttgcttcactctttcag 34451688  T
Q  143 tcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttctagtgatcttcagct 242  Q
    ||||||||||||||| ||||| | | ||||||||||| ||||||| || |||| ||||||||||||| ||||||| |||||||||| ||||   ||| ||    
T  34451687 tcttctgcaatgcttagacgatactgaatccattgaacagcctttgaatctttaagtcttgcatctcctgatgaactagagcttctggtga---tcaact 34451591  T
Q  243 tcagatgaacttgcttctgatga 265  Q
    ||  |||||||||||||||||||    
T  34451590 tctaatgaacttgcttctgatga 34451568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 25597558 - 25597709
Alignment:
Q  92 catccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaag 191  Q
    ||||||||||||| |||||||| | |||||| ||| | ||||||||||||||||||| |||||||| ||||||||||||||||||||| | ||||| |||    
T  25597558 catccaatgccttcaaatcctttcgaaatagccgtcgcttcactcttccagtcttctacaatgcttagacgagattaaatccattgaacatcctttgaag 25597657  T
Q  192 ctttgagtcttgcatctcatgatgaaatagagcttctagtgatcttcagctt 243  Q
    |||| |||||||||| || ||||||| || | ||||| ||||||||||||||    
T  25597658 ctttaagtcttgcatgtcctgatgaactacaacttctggtgatcttcagctt 25597709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 20488064 - 20487927
Alignment:
Q  16 acaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttcc 115  Q
    ||||||||  |||||||||||||||||||||| ||||||||||   |||||||  |||||||||||||| ||||||||||||||||||| |||||||| |    
T  20488064 acaaaaacagagtagtggaggtagtggttgtaaacttcgtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttc 20487965  T
Q  116 aaaatagtcgttgtttcactcttccagtcttctgcaat 153  Q
    ||||||| ||||| |||||| || ||||||||||||||    
T  20487964 aaaatagccgttgcttcacttttacagtcttctgcaat 20487927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 16877212 - 16877463
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    |||| |||||||  |||||||||||||||||||||||||||||||||   |||||||  |||||||||||||  ||  |||||||||| |||| ||||||    
T  16877212 agaggcaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaggaattagcatccaattccttcaaatcc 16877311  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||  || |||||||||| |||||| |  ||||||||||||||  || |||||| || |||||||| || | | ||| ||||||| ||  ||||||||| |    
T  16877312 ttttaagatagtcgttgcttcactttctcagtcttctgcaatctttagacgagtttgaatccattaaacaacttttgaagctttaag--ttgcatctcct 16877409  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || | ||| | |||||   ||||||| ||||||||||||||||||||    
T  16877410 gatgaactacaacttttggtgattcacagcttctgatgaacttgcttctgatga 16877463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 16336126 - 16336287
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||| || |||||||||||||||||||||| | ||||| |  |||||||||||||| || |||||| |||||||||  |||||    
T  16336126 agagacaaaaacagagtagtgtagatagtggttgtacacttcgtacaatcgtactatgtcaacgctctttgaagaataagcattcaatgccttctaatcc 16336225  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatcc 173  Q
    ||||||||||||||||| |  ||| |||||||||||||||||| || |||||| || |||||    
T  16336226 ttccaaaatagtcgttgctatacttttccagtcttctgcaatgtttagacgagtttgaatcc 16336287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 19833169 - 19832938
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctcttt-gaaaaacaagcatccaatgcctttaaatccttccaaaatagtc 124  Q
    |||||||||||||||| ||||||||||||||||   ||||| |  ||||||||||| ||  |||||||||||||||| || |||||||| ||||||||||    
T  19833169 agtagtggaggtagtgcttgtacacttcgtacaaacgtactatgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagtc 19833070  T
Q  125 gttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagc 224  Q
    |||| |||||| |||||||||||||||||  || || ||| || ||||| || || ||| ||| ||||||| ||  ||||||||| ||||||| || | |    
T  19833069 gttgcttcacttttccagtcttctgcaatctttagatgagtttgaatccgttaaacagcttttaaagctttaag--ttgcatctcctgatgaactacatc 19832972  T
Q  225 ttctagtgatcttcagcttcagatgaacttgctt 258  Q
    |||| |||||  |||||||| ||| | |||||||    
T  19832971 ttctggtgattctcagcttctgataatcttgctt 19832938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 265
Target Start/End: Original strand, 21235138 - 21235363
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||||||||||||||||||||| |||| |||||||||  |||||||||||||| |||||||||| |||||||| |||| ||| |||       |    
T  21235138 agtagtggaggtagtggttgtacacttcatacaattgtactttgtcaacgctctttgaagaacaagcatcgaatgccttcaaatgctttcaa-------g 21235230  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    |   || |      ||| ||| |||||||||| ||||||||||||||||||||| | ||||| |||||||  ||  |||||||| ||||||| |  ||||    
T  21235231 tccattgaa-----cagccttttgcaatgcttagacgagattaaatccattgaacaacctttaaagctttatgt--tgcatctcctgatgaactgcagct 21235323  T
Q  226 tctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  21235324 tctagtgattttcagcttctgatgaacttgcttctgatga 21235363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 26 - 195
Target Start/End: Complemental strand, 10640555 - 10640386
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttc-caacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtc 124  Q
    ||||||||||||||||||||||||||||||||| |||| |||||  ||||||||||  || |||||||||| |||||||| ||||||||   || |||||    
T  10640555 agtagtggaggtagtggttgtacacttcgtacaattgtccttttttcaacgctcttcaaagaacaagcatctaatgccttcaaatccttttgaattagtc 10640456  T
Q  125 gttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagcttt 195  Q
    |||| ||||||||||  |||||||||||||| | | || |||||||||| ||||| | ||||| |||||||    
T  10640455 gttgcttcactcttctggtcttctgcaatgc-taggcgtgattaaatcctttgaacaacctttgaagcttt 10640386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 15 - 153
Target Start/End: Original strand, 12348995 - 12349133
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttc 114  Q
    |||||||||  |||||||||| |||||||||||||||| |||||   ||||| |  |||||||||||||| || ||||||||||||||||| |||||||     
T  12348995 gacaaaaacagagtagtggagatagtggttgtacactttgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaatccttt 12349094  T
Q  115 caaaatagtcgttgtttcactcttccagtcttctgcaat 153  Q
    |||||||||||||| |  ||| |||||||||||||||||    
T  12349095 caaaatagtcgttgctatacttttccagtcttctgcaat 12349133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 26943577 - 26943719
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcctt 113  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||| ||||||||  |||||||||||  || |||||||||||||||||||  ||||||     
T  26943577 agacaaaaacagagtagtggaagtagtggttgtacacttcgtacaattgtacttcgccaacgctcttcaaagaacaagcatccaatgccttctaatccta 26943676  T
Q  114 ccaaaatagtcgttgtttcactcttccagtcttctgcaatgct 156  Q
       ||||||  |||| |||||||||| ||||||||||||||||    
T  26943677 ttgaaatagcggttgcttcactcttctagtcttctgcaatgct 26943719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 12423261 - 12423423
Alignment:
Q  13 gagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcct 112  Q
    |||||||||||  |||||||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || |||||| |||||||||  ||||||    
T  12423261 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaaggtactatgtcaacgctctttgaagaataagcatacaatgccttccaatcct 12423360  T
Q  113 tccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccatt 176  Q
    | |||||||||||||| |  ||| |||||||||||||| || ||| |||||| || ||||||||    
T  12423361 ttcaaaatagtcgttgctatacttttccagtcttctgc-attcttagacgagtttgaatccatt 12423423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 156
Target Start/End: Original strand, 19470683 - 19470813
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||||||||||||||| |||||||||| |||| ||||| | |||||||   || ||||||||||||||||||| ||||||||   || ||||||    
T  19470683 agtagtggaggtagtggttgtaaacttcgtacaattgtcctttttccacgctctgcaaagaacaagcatccaatgccttcaaatccttttgaattagtcg 19470782  T
Q  126 ttgtttcactcttccagtcttctgcaatgct 156  Q
    ||| |||| |||||  ||||| |||||||||    
T  19470783 ttgcttcattcttctggtcttgtgcaatgct 19470813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 25594067 - 25594155
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatg 100  Q
    ||||||| ||||| |||||||||||||||||||||||| |||||||| |||||||||  |||||| |||  || |||||||||||||||    
T  25594067 agagacacaaactgagtagtggaggtagtggttgtacatttcgtacaattgtactttgtcaacgcgcttcaaagaacaagcatccaatg 25594155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 19066168 - 19066079
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||    |||| |  |||||||||||||| || |||||||||||||    
T  19066168 agagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaacatactatgtcaacgctctttgaagaataagcatccaatgc 19066079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 17381520 - 17381598
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaa 90  Q
    ||||||||||||  | |||||||||||||| ||||||||||||||||   |||||||  |||||||||||||| |||||    
T  17381520 agagacaaaaacagaatagtggaggtagtgattgtacacttcgtacaaacgtactttgtcaacgctctttgaagaacaa 17381598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 33352076 - 33351828
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| ||||| ||||||||||||||||   ||||| |  |||||||| ||||| || || |||||||||  ||| |||||    
T  33352076 agagacaaaaacagagtagtggagatagtgattgtacacttcgtacaaacgtactatgtcaacgctc-ttgaagaataaacatccaatgtttttcaatcc 33351978  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||| | ||| |  ||| ||||||||||||||| | ||| ||||||  | ||||| |  || ||| ||| | ||||| ||  |||||||||      
T  33351977 tttcaaaatag-ccttgctatacttttccagtcttctgcact-cttagacgagtgtgaatccttgaaacagcttttgaggctttaag--ttgcatctccc 33351882  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||||  || |||| |||||   ||||||| ||||||||||||||||||||    
T  33351881 gatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatga 33351828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 17608286 - 17608222
Alignment:
Q  201 ttgcatctcatgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||||  ||||||| || ||||||| ||||| | ||||||| ||||||||||||||||||||    
T  17608286 ttgcatcttctgatgaactatagcttctggtgatatacagcttctgatgaacttgcttctgatga 17608222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 20635720 - 20635763
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtac 57  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||    
T  20635720 agacaaaaacagagtagtggaggtagtggttgtacactttgtac 20635763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 22386803 - 22386846
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtac 57  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||    
T  22386803 agacaaaaacagagtagtggaggtagtggttgtacacttggtac 22386846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 4292872 - 4292910
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  4292872 agacaaaaacagagtagtggaggtagtggttgtacactt 4292910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 5845230 - 5845268
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  5845230 agacaaaaacagagtagtggaggtagtggttgtacactt 5845268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 7751285 - 7751247
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  7751285 agacaaaaacagagtagtggaggtagtggttgtacactt 7751247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 8653806 - 8653844
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  8653806 agacaaaaacagagtagtggaggtagtggttgtacactt 8653844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 16123587 - 16123549
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  16123587 agacaaaaacagagtagtggaggtagtggttgtacactt 16123549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 17316675 - 17316629
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtaca 58  Q
    ||||||||||||  ||||||| || ||||||||||||||||||||||    
T  17316675 agagacaaaaacatagtagtgcagatagtggttgtacacttcgtaca 17316629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 17741752 - 17741714
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  17741752 agacaaaaacagagtagtggaggtagtggttgtacactt 17741714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 18826288 - 18826250
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  18826288 agacaaaaacagagtagtggaggtagtggttgtacactt 18826250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 18834684 - 18834646
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  18834684 agacaaaaacagagtagtggaggtagtggttgtacactt 18834646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 19482751 - 19482797
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtaca 58  Q
    ||||||||||||  ||||||| || ||||||||||||||||||||||    
T  19482751 agagacaaaaacagagtagtgcagatagtggttgtacacttcgtaca 19482797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 25518836 - 25518874
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  25518836 agacaaaaacagagtagtggaggtagtggttgtacactt 25518874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 29765681 - 29765719
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  29765681 agacaaaaacagagtagtggaggtagtggttgtacactt 29765719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 31572560 - 31572598
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  31572560 agacaaaaacagagtagtggaggtagtggttgtacactt 31572598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 6158354 - 6158391
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  6158354 gacaaaaacagagtagtggaggtagtggttgtacactt 6158391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 12827840 - 12827877
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  12827840 gacaaaaacagagtagtggaggtagtggttgtacactt 12827877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 13913196 - 13913233
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  13913196 gacaagaacaaagtagtggaggtagtggttgtacactt 13913233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 17042769 - 17042806
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  17042769 gacaagaacaaagtagtggaggtagtggttgtacactt 17042806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 17608450 - 17608417
Alignment:
Q  19 aaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||| ||||||||||||||||||||||||||||    
T  17608450 aaaacaaagtagtggaggtagtggttgtacactt 17608417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 18925811 - 18925774
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  18925811 gacaaaaacagagtagtggaggtagtggttgtacactt 18925774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 19065987 - 19065926
Alignment:
Q  204 catctcatgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| ||||||| |  ||||||| ||||| | ||||||| ||||||||||||||||||||    
T  19065987 catctcctgatgaactgcagcttctggtgatatacagcttctgatgaacttgcttctgatga 19065926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 19625821 - 19625869
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacg 75  Q
    ||||||||||||||||||||||||||| ||||  |||| |||||||||||    
T  19625821 agtagtggaggtagtggttgtacactt-gtactattgtccttttccaacg 19625869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 26589598 - 26589690
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacac-ttcgtacacttgtacttttccaacgctctttgaaaaaca--agcatccaatgc 101  Q
    ||||||| ||||  ||||||||| ||||||||||||||| ||||||||   ||||| |  |||||||||||||||| ||  ||||||||||||    
T  26589598 agagacagaaacagagtagtggaagtagtggttgtacactttcgtacagacgtactatgtcaacgctctttgaaaatcattagcatccaatgc 26589690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 265
Target Start/End: Original strand, 19482930 - 19482974
Alignment:
Q  221 gagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||||| ||||||| |||||||  |||||||||||||||||||    
T  19482930 gagcttctggtgatctgcagcttctaatgaacttgcttctgatga 19482974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 151; Significance: 6e-80; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 22317586 - 22317840
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||| ||||||| | |||||||||||||||||||| |||||||||| |||||||||  |||||||||||||| ||||||||||||||||||||||||||    
T  22317586 agagataaaaactgaatagtggaggtagtggttgtatacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctttaaatcc 22317685  T
Q  112 ttccaaaa-tagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctca 210  Q
    || ||||| ||||||||| |||||||||| |||||| |||||||||| || ||||||||||||| |||| ||||||| ||||||| |||||||||||||     
T  22317686 tttcaaaaatagtcgttgcttcactcttctagtcttatgcaatgcttagatgagattaaatccaatgaaaagcctttgaagctttaagtcttgcatctct 22317785  T
Q  211 tgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||||||||||||||| ||||| ||||||||| |||| |||||||| ||||||    
T  22317786 tgatgaaatagagcttctggtgattttcagcttctgatgtacttgcttatgatga 22317840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 23235000 - 23235238
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  |||| |||||  || || |||||||||||||||| |||| |    
T  23235000 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacactcttcaaagaataagcatccaatgccttcaaattc 23235099  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||| |||||||||||||||    
T  23235100 tttcaaaatagtcgttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatctcat 23235199  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |||||||||| ||||| ||||||||| |||||    
T  23235200 gatgaactagagcttctggtgattttcagcttctgatga 23235238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 13964085 - 13963832
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  || ||||||||||||||||||| |||| |    
T  13964085 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaattc 13963986  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||||||||| | ||||| ||||||| | ||||||||||  |    
T  13963985 tttcaaaatagtcgttgcttcactctttcagtcttctacaatgcttagacgagattaaatccattgaacaacctttgaagctttaaatcttgcatctact 13963886  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| ||||||||||||||||||| | |||| || |||||||||||||||||    
T  13963885 gatgaactagagcttctagtgatctttaacttctgaggaacttgcttctgatga 13963832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 25829127 - 25829352
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||| | |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  || ||||||||||||||||||| ||||||    
T  25829127 agagacacaaaatgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 25829226  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||| | ||||||||||||| |    
T  25829227 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacatcctttgaagctctaagtcttgcatctcct 25829326  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    |||||| |  ||||||| ||||||||    
T  25829327 gatgaactttagcttctggtgatctt 25829352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 20568849 - 20568632
Alignment:
Q  20 aaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaa 119  Q
    ||||| |||||||| | |||||||||||||||||||||| |||||||||  ||||||||||  || ||||||||||||||||||| |||||||| |||||    
T  20568849 aaactgagtagtggggatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 20568750  T
Q  120 tagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaat 219  Q
    | || |||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| ||||||| ||||||||||||| ||||||| |    
T  20568749 ttgttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccatggaacagcctttaaagctttaagtcttgcatctcctgatgaact 20568650  T
Q  220 agagcttctagtgatctt 237  Q
    | ||||||| ||||||||    
T  20568649 acagcttctggtgatctt 20568632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 30666982 - 30667220
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  || | ||||||||||||||||| ||||||    
T  30666982 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagatcaagcatccaatgccttcaaatcc 30667081  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||||| | ||||||||||| |    
T  30667082 tttcaaaatagtcgttgcttcattcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaattcttgcatctcct 30667181  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| || | |||||  |  ||||||||||| |||||    
T  30667182 gatgaactacaacttctgatattcttcagcttctgatga 30667220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 26 - 265
Target Start/End: Complemental strand, 6574217 - 6573978
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacactt-gtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtc 124  Q
    ||||||||||||||||||||||||||||||||| || |||||||  |||||||||||||| ||||| ||||||||||||| |||||||| |||| |||||    
T  6574217 agtagtggaggtagtggttgtacacttcgtacaatttgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcctttcaaactagtc 6574118  T
Q  125 gttgtttcactcttccagtcttctgcaatgc-tttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagag 223  Q
    |||| |||||| ||||||||||||||||||| || |||||||||||||| |||||| | ||||| |||||||   | ||||||||  ||||||| |  |     
T  6574117 gttgcttcacttttccagtcttctgcaatgcattagacgagattaaatcaattgaacaacctttgaagcttt--atgttgcatcttctgatgaactgcaa 6574020  T
Q  224 cttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||||||| ||||||||| ||||||||||||||||||||    
T  6574019 cttctagtgattttcagcttctgatgaacttgcttctgatga 6573978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 22188209 - 22187971
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| || ||||||   |||||||||  || ||||||||||||||||||| |||||     
T  22188209 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattatactttgttaacgctcttcaaagaacaagcatccaatgccttcaaatct 22188110  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
     | ||||||||| |||| ||||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||||| ||||||| |||||||||| || |    
T  22188109 attcaaaatagttgttgcttcactctttcagtcttctgcaatacttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatgtcct 22188010  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |  | ||||| ||||||||||||||| |||||    
T  22188009 gatgaacttcaacttctggtgatcttcagcttctgatga 22187971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 18377013 - 18376760
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  || ||||||||||||||||||| ||||||    
T  18377013 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 18376914  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| |||||| ||  | ||||||||||||||| ||||||||||||||||||||| ||||||| ||||||| |||||  |||||       
T  18376913 tttcaaaatagtagttgattcactattaaaatcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtctctcatcttca 18376814  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
     ||||| |  | ||||| ||||||||| ||||| ||||||||| ||||||||||    
T  18376813 aatgaacttcaacttctggtgatcttctgcttctgatgaacttacttctgatga 18376760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 36 - 265
Target Start/End: Complemental strand, 20152118 - 20151890
Alignment:
Q  36 gtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcact 135  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||| |||||||| |||| ||  ||||| ||||||    
T  20152118 gtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaactaaccgttgcttcact 20152019  T
Q  136 cttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttctagtgatc 235  Q
     ||||||||||||||||||||| ||||||||||||||||||||| | | ||| ||||||| | | ||||||||| ||||||  |  ||||||| |||||     
T  20152018 tttccagtcttctgcaatgcttagacgagattaaatccattgaacaacttttgaagcttt-aatgttgcatctcctgatgagctgcagcttctggtgatt 20151920  T
Q  236 ttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||||| |||||||||| |||||||||    
T  20151919 ttcagcttctgatgaacttgtttctgatga 20151890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 13 - 250
Target Start/End: Original strand, 30621210 - 30621447
Alignment:
Q  13 gagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcct 112  Q
    |||||| ||||| |||||||||| |||||||| ||||||||||||| |||||||||  ||||||||||  || | ||| ||||||||||||| |||||||    
T  30621210 gagacacaaactgagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgctcttcaaagatcaaacatccaatgccttcaaatcct 30621309  T
Q  113 tccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatg 212  Q
    | ||||||||||| || ||||||||||||||||||||||||||||  |||||||||||||||||||| | ||||| || |||| | ||||||||||| ||    
T  30621310 ttcaaaatagtcgctgcttcactcttccagtcttctgcaatgcttacacgagattaaatccattgaacaacctttgaacctttaattcttgcatctcctg 30621409  T
Q  213 atgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    ||| | || | ||||||||||| ||||||||| |||||    
T  30621410 atgcactacaacttctagtgatattcagcttctgatga 30621447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 13 - 250
Target Start/End: Original strand, 30623831 - 30624068
Alignment:
Q  13 gagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcct 112  Q
    |||||| ||||| |||||||||| |||||||| ||||||||||||| |||||||||  ||||||||||  || | ||| ||||||||||||| |||||||    
T  30623831 gagacacaaactgagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgctcttcaaagatcaaacatccaatgccttcaaatcct 30623930  T
Q  113 tccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatg 212  Q
    | ||||||||||| || ||||||||||||||||||||||||||||  |||||||||||||||||||| | ||||| || |||| | ||||||||||| ||    
T  30623931 ttcaaaatagtcgctgcttcactcttccagtcttctgcaatgcttacacgagattaaatccattgaacaacctttgaacctttaattcttgcatctcctg 30624030  T
Q  213 atgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    ||| | || | ||||||||||| ||||||||| |||||    
T  30624031 atgcactacaacttctagtgatattcagcttctgatga 30624068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 21537353 - 21537117
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcctt 113  Q
    ||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  |||| ||||||||||||||||  ||| ||||    
T  21537353 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaagcaagcatccaatgcctccaaaacctt 21537254  T
Q  114 ccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatga 213  Q
     |||||||||||||| ||||||||||  ||||||||||||| ||  |||||||||||||||||||| | ||||| ||||||| ||||||||||||| |||    
T  21537253 tcaaaatagtcgttgcttcactcttctggtcttctgcaatgtttaaacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctga 21537154  T
Q  214 tgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||| |  | |||||||||||||| | |||| |||||    
T  21537153 tgaacttcatcttctagtgatctttaacttctgatga 21537117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 25037366 - 25037128
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||| ||| |||||||||  ||||||| ||  || ||||| |||||||||| || ||||||    
T  25037366 agagacacaaactgagtagtggagatagtggttgtacacttcgaacaattgtactttgtcaacgcttttcaaagaacaaacatccaatgctttcaaatcc 25037267  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| ||||||||   ||||||||||||||||||||||||||| ||| ||||| ||||||||||| | ||||| ||||||| ||||||||||||| |    
T  25037266 tttcaaattagtcgttacatcactcttccagtcttctgcaatgcttcgacaagattgaatccattgaacaacctttgaagctttaagtcttgcatctcct 25037167  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| || | ||||| ||||||||||||||| |||||    
T  25037166 gatgaactacaacttctggtgatcttcagcttctgatga 25037128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 25041473 - 25041235
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||| ||| |||||||||  ||||||| ||  || ||||| |||||||||| || ||||||    
T  25041473 agagacacaaactgagtagtggagatagtggttgtacacttcgaacaattgtactttgtcaacgcttttcaaagaacaaacatccaatgctttcaaatcc 25041374  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| ||||||||   ||||||||||||||||||||||||||| ||| ||||| ||||||||||| | ||||| ||||||| ||||||||||||| |    
T  25041373 tttcaaattagtcgttacatcactcttccagtcttctgcaatgcttcgacaagattgaatccattgaacaacctttgaagctttaagtcttgcatctcct 25041274  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| || | ||||| ||||||||||||||| |||||    
T  25041273 gatgaactacaacttctggtgatcttcagcttctgatga 25041235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 19540409 - 19540634
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||| |  ||||||||||| || |||||||||||||| |||| ||| ||    
T  19540409 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctctttaaagaacaagcatccaataccttcaaaacc 19540508  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || | |||||| ||||| |||||||| | ||||||||||||||||| || |||||||||||||||||| | | ||| ||||||| |||||||||||||||    
T  19540509 tttcgaaatagccgttgcttcactctcctagtcttctgcaatgcttagatgagattaaatccattgaacaacatttgaagctttaagtcttgcatctcat 19540608  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    |||||| |  ||||||| ||||||||    
T  19540609 gatgaacttcagcttctggtgatctt 19540634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 9015467 - 9015272
Alignment:
Q  20 aaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaa 119  Q
    ||||| |||||||||| ||||||||||||||  |||||| |||||||||  ||||||||||  || || ||||||||||||| || |||||||| |||||    
T  9015467 aaactgagtagtggagatagtggttgtacac--cgtacaattgtactttgtcaacgctcttcaaagaataagcatccaatgctttcaaatcctttcaaaa 9015370  T
Q  120 tagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaa 217  Q
    |||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| | ||||| ||||||| ||||||||||||| |||||||    
T  9015369 tagttgttgtttcactcttccagtcttctgcaatgcttagacaagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaa 9015272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 24377094 - 24377347
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||| |  ||||||||||  || ||||||||||||||||  | ||| ||    
T  24377094 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctctcaaaacc 24377193  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatctca 210  Q
    || |||||||||||||| ||||||||||  |||||||||||||| | | || |||||||||||||||| | || ||| ||||||| |||||||||||||     
T  24377194 tttcaaaatagtcgttgcttcactcttctggtcttctgcaatgc-taggcgtgattaaatccattgaacaaccttttgaagctttaagtcttgcatctct 24377292  T
Q  211 tgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||| |  ||||||| |||||||| |||||| ||||||||| ||||||||||    
T  24377293 tgatgaacttcagcttctggtgatctttagcttctgatgaactttcttctgatga 24377347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 24576028 - 24576254
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||  |||| |||||  |  ||||| || |||||||||||||||||    
T  24576028 agagacacaaactaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaactctcttcaacgaacaaacaaccaatgcctttaaatcc 24576127  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgaga-ttaaatccattgaatagcctttcaagctttgagtcttgcatctca 210  Q
    || ||||||||| |||| |||||| ||||||||||||||||||||| || |||| |||||||||||||| | ||||| ||||||| ||| |||||||||     
T  24576128 tttcaaaatagttgttgcttcacttttccagtcttctgcaatgcttagatgagatttaaatccattgaacaacctttgaagctttaagtattgcatctcc 24576227  T
Q  211 tgatgaaatagagcttctagtgatctt 237  Q
    | ||||| |  ||||||| ||||||||    
T  24576228 taatgaactttagcttctggtgatctt 24576254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 12 - 207
Target Start/End: Original strand, 38781391 - 38781587
Alignment:
Q  12 agagacaaaaacta-agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatc 110  Q
    ||||||||||| || ||||||||| ||||||||||||||||||||||| |||||||||  |||||||||||||| ||||| ||| ||||||||| |||||    
T  38781391 agagacaaaaaatagagtagtggatgtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaatcattcaatgccttcaaatc 38781490  T
Q  111 cttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatc 207  Q
    ||| ||||||||| |||| |||||| |||||||||||| || || || |||||||||||||| |||||| | ||||| ||||||| |||||||||||    
T  38781491 ctttcaaaatagttgttgcttcacttttccagtcttctacattgtttagacgagattaaatcaattgaacaacctttgaagctttaagtcttgcatc 38781587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 24850773 - 24850534
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| | ||| ||||||||| |||||||||||||| ||||||||||||||||||  ||||||||||  || |||||||||||||||| || ||||||    
T  24850773 agagacacacactgagtagtggatgtagtggttgtacatttcgtacacttgtactttgtcaacgctcttcaaagaacaagcatccaatgctttgaaatcc 24850674  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatctca 210  Q
    || ||||||| |||||| ||||||||||  |||||| ||||||| | ||||||||||||||||||||| | || ||| ||||||| |||||||||||||     
T  24850673 tttcaaaatattcgttgcttcactcttctggtcttcagcaatgcgtagacgagattaaatccattgaacaaccttttgaagctttaagtcttgcatctcc 24850574  T
Q  211 tgatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    ||||| | |  ||| ||| |||||||| |||||| |||||    
T  24850573 tgatgtacttcagcatctggtgatctttagcttctgatga 24850534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 10009857 - 10009631
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| ||||||||||||| |||||||| ||||||| |  ||||| ||||  || |||||||||||||||| || ||||||    
T  10009857 agagacacaaactgagtagtggagatagtggttgtacatttcgtacaattgtactatgtcaacgttcttcaaagaacaagcatccaatgctttcaaatcc 10009758  T
Q  112 ttccaaaatagtcgttgtttcactcttc-cagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctca 210  Q
    || ||||||||| |||| ||||||| ||   ||||| |||||||||| ||||||||| ||||||||||| |||| || ||||||| |||||||||||||     
T  10009757 tttcaaaatagttgttgcttcactcctcttggtcttttgcaatgcttggacgagattgaatccattgaacagcccttgaagctttaagtcttgcatctcc 10009658  T
Q  211 tgatgaaatagagcttctagtgatctt 237  Q
    ||||||| |  ||||||| ||||||||    
T  10009657 tgatgaacttcagcttctggtgatctt 10009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 40782470 - 40782689
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||||| ||||||| |  ||||||||||  || ||||| |||||||||| || ||||||    
T  40782470 agagacacaaactaagtattggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaaacatccaatgctttcaaatcc 40782569  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| ||||||| ||  ||||| |||||||||| ||||||||| |||||||||||     |||  |||| | ||||||||||||| |    
T  40782570 tttcaaaatagtcgttgcttcactcctctggtcttttgcaatgcttggacgagattgaatccattgaa----attt--agctctaagtcttgcatctcct 40782663  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    ||||||||  ||||||| ||||||||    
T  40782664 gatgaaatttagcttctggtgatctt 40782689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 28711805 - 28711553
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||   |||||||| |||||||||||||| ||||||||||||||||||| |||| |    
T  28711805 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttttcaacgctctttgaagaacaagcatccaatgccttcaaattc 28711706  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
     | | |||||||||||| || ||| |||||||||||||||||  || ||| || || |||||||| || ||| ||| |||| || ||  ||||||| |||    
T  28711705 attcgaaatagtcgttgctttacttttccagtcttctgcaatctttagacaaggttgaatccattaaacagcttttgaagccttaag--ttgcatcccat 28711608  T
Q  212 gatgaaatagagcttctagtga-tcttcagcttcagatgaacttgcttctgatga 265  Q
     ||||| |  ||||||| |||| | ||  ||||| ||| ||||||||||||||||    
T  28711607 tatgaactgcagcttctggtgattttttggcttctgataaacttgcttctgatga 28711553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 31800994 - 31800853
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||  ||||||||  |||||||||||||| | ||| |||||||||| || ||||||    
T  31800994 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaatgtactttgtcaacgctctttgaagatcaaacatccaatgctttcaaatcc 31800895  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaat 153  Q
    || ||||||||| ||||||||||| |||||||||||||||||    
T  31800894 tttcaaaatagttgttgtttcacttttccagtcttctgcaat 31800853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 39037749 - 39037496
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||  ||||||||||  |||| |||||||| |||||||| || | |    
T  39037749 agagacacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaagcaagcatctaatgccttcaacttc 39037650  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
     |   || ||| ||||| |||||| | | | ||||||||||||||| |||||||| ||||||| |||| | ||||| ||| ||| |||||  |||||  |    
T  39037649 atttgaattagccgttgcttcactttcctaatcttctgcaatgcttagacgagatcaaatccaatgaacaacctttgaagttttaagtctctcatcttct 39037550  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||| || |  | ||||  ||||||||||||||| ||||||||||||||||||||    
T  39037549 gatcaactttaacttccggtgatcttcagcttctgatgaacttgcttctgatga 39037496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 26 - 265
Target Start/End: Complemental strand, 34322029 - 34321792
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    ||||||| || ||||||||||||||||| ||||   ||||| |  |||||||||||||| || ||| ||||||||||||| ||||||| |||||||||||    
T  34322029 agtagtgaagatagtggttgtacacttcatacaaacgtactatgtcaacgctctttgaagaataagaatccaatgcctttcaatcctttcaaaatagtcg 34321930  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| |  ||| |||||| ||||||||||  || |||||| || ||||| || || ||| ||| | ||||| ||  ||||||||| ||||||| || ||||    
T  34321929 ttgctatacttttccaggcttctgcaatctttagacgagtttgaatcctttaaacagcttttgaggctttaag--ttgcatctcctgatgaattacagct 34321832  T
Q  226 tctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||||||  |||||||| ||| ||||||||||||||||    
T  34321831 tctagtgattctcagcttctgataaacttgcttctgatga 34321792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 45 - 216
Target Start/End: Original strand, 22260432 - 22260603
Alignment:
Q  45 gtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtc 144  Q
    ||||||||| |||| ||||||| |  ||| ||||||  || |||||||||||| | |||| |||||||||||||||| | |||| |||||| ||||||||    
T  22260432 gtacacttcttacaattgtactatgtcaaagctcttcaaagaacaagcatccagttccttcaaatccttccaaaatatttgttgcttcacttttccagtc 22260531  T
Q  145 ttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatga 216  Q
    ||||||||||||| ||||||||||||||||||||| | | ||| | ||||| ||||||||||||| ||||||    
T  22260532 ttctgcaatgcttagacgagattaaatccattgaacaacttttgacgctttaagtcttgcatctcctgatga 22260603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 33074219 - 33074470
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||| | ||| | |  ||||| | |||||| || ||||||| ||||||||  ||||     
T  33074219 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaatcgtattatgtcaacgttttttgaagaataagcatctaatgccttccaatct 33074318  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
     |||||||||||||||| |  ||| |||||||||||||||||  || |||||| || ||||| || || ||| ||| ||| ||| ||  ||||||||| |    
T  33074319 gtccaaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcctttaaacagcttttgaagttttaag--ttgcatctcct 33074416  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || | |||||||||||  |||||||| ||| ||||||||||||||||    
T  33074417 gatgaactacaacttctagtgattctcagcttctgataaacttgcttctgatga 33074470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 164
Target Start/End: Original strand, 6392640 - 6392779
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctcttt-gaaaaacaagcatccaatgcctttaaatccttccaaaatagtc 124  Q
    ||||||||||||||||||||  |||||||||||   |||||||  ||||||||||| ||  |||||||||||||||| || |||||||| ||||||||||    
T  6392640 agtagtggaggtagtggttgcgcacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagtc 6392739  T
Q  125 gttgtttcactcttccagtcttctgcaatgctttgacgag 164  Q
    |||| |||||| ||||||||||||||||| ||| ||||||    
T  6392740 gttgcttcacttttccagtcttctgcaatccttagacgag 6392779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 12 - 194
Target Start/End: Original strand, 24779336 - 24779518
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||| |||||||| |||| ||||||| |  |||| |||||  || ||||| ||||| |||| || ||||||    
T  24779336 agagacacaaactgagtagtggagatagtggttatacacttcatacaattgtactatgtcaacactcttcaaagaacaaacatccgatgctttcaaatcc 24779435  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctt 194  Q
    || |||||||||||||| ||||||| ||  ||||| | |||||||| ||||||||| ||||||||||| | ||||| ||||||    
T  24779436 tttcaaaatagtcgttgcttcactcctctggtctttttcaatgcttggacgagattgaatccattgaacaacctttgaagctt 24779518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 15 - 153
Target Start/End: Complemental strand, 28701333 - 28701195
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttc 114  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    ||||||  |||||| ||||||| ||||||||||||||||||| ||||||||     
T  28701333 gacaaaaacaaagtagtggaggtaatggttgtacacttcgtacaaacttactttgtcaacgccctttgaagaacaagcatccaatgccttcaaatccttt 28701234  T
Q  115 caaaatagtcgttgtttcactcttccagtcttctgcaat 153  Q
    |||||||   |||| || ||| |||||||||||||||||    
T  28701233 caaaatatctgttgctttacttttccagtcttctgcaat 28701195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 209
Target Start/End: Complemental strand, 28140726 - 28140529
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| ||||| | |||||||| ||||| ||||||| |  ||||||||||  || |||||||||||||||  || ||||||    
T  28140726 agagacacaaactgagtagtggagatagtgatggtacactttgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgttttcaaatcc 28140627  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctc 209  Q
    || ||||||||| |||| |||||||      |||| |||||||||| ||||||||| ||||||||||| | ||||| ||| ||| |||||||||||||    
T  28140626 tttcaaaatagttgttgcttcactccaatgatcttttgcaatgcttggacgagattgaatccattgaacaacctttgaagttttaagtcttgcatctc 28140529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 34 - 173
Target Start/End: Complemental strand, 45087269 - 45087130
Alignment:
Q  34 aggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttca 133  Q
    |||||||||||||||||||||||||   |||||||  |||||||||||  | || ||||||| ||||| || |||||||| |||||||||||||| ||||    
T  45087269 aggtagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgagaataagcatctaatgcattcaaatcctttcaaaatagtcgttgcttca 45087170  T
Q  134 ctcttccagtcttctgcaatgctttgacgagattaaatcc 173  Q
    || ||||||||||||||||| ||| |||||| || |||||    
T  45087169 cttttccagtcttctgcaatccttagacgaggttgaatcc 45087130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 26 - 265
Target Start/End: Complemental strand, 31328059 - 31327821
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||||||||||||||||||||||| |     ||||||  |||||||||||||| |||||||||||||||| || ||| || |||||||||||||    
T  31328059 agtagtggaggtagtggttgtacacttcgttcgaacatactttgtcaacgctctttgaagaacaagcatccaatgctttcaaaaccctccaaaatagtcg 31327960  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagc-ctttcaagctttgagtcttgcatctcatgatgaaatagagc 224  Q
    ||| ||||||  || |||||||||||||  || | |||| || ||||| ||||| | |  ||| || |||| ||  ||||||||| ||||||| |  |||    
T  31327959 ttgcttcacttctctagtcttctgcaatctttaggcgagtttgaatccgttgaacaactttttgaaactttaag--ttgcatctcctgatgaactgcagc 31327862  T
Q  225 ttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||| |||||   ||||||| ||| ||||||||||||||||    
T  31327861 ttctggtgattcacagcttctgataaacttgcttctgatga 31327821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 26 - 265
Target Start/End: Complemental strand, 31334780 - 31334542
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||||||||||||||||||||||| |     ||||||  |||||||||||||| |||||||||||||||| || ||| || |||||||||||||    
T  31334780 agtagtggaggtagtggttgtacacttcgttcgaacatactttgtcaacgctctttgaagaacaagcatccaatgctttcaaaaccctccaaaatagtcg 31334681  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagc-ctttcaagctttgagtcttgcatctcatgatgaaatagagc 224  Q
    ||| ||||||  || |||||||||||||  || | |||| || ||||| ||||| | |  ||| || |||| ||  ||||||||| ||||||| |  |||    
T  31334680 ttgcttcacttctctagtcttctgcaatctttaggcgagtttgaatccgttgaacaactttttgaaactttaag--ttgcatctcctgatgaactgcagc 31334583  T
Q  225 ttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||| |||||   ||||||| ||| ||||||||||||||||    
T  31334582 ttctggtgattcacagcttctgataaacttgcttctgatga 31334542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 217
Target Start/End: Original strand, 22802467 - 22802656
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||||||||||||||||||||||||||   |||||||  |||| ||||||||| || |||||||  ||||||| |||||||| |||||||| |     
T  22802467 agtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaactctctttgaagaataagcatcatatgccttcaaatcctttcaaaatagcca 22802566  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaa 217  Q
    ||| || ||  ||| |||||||||||||  || |||||| || |||||||| |||||| ||| || |||| ||  ||||||||| |||||||    
T  22802567 ttgctttacctttctagtcttctgcaatctttagacgagtttgaatccattaaatagcttttgaatctttaag--ttgcatctcctgatgaa 22802656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 22455097 - 22454859
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| ||||||||||||| ||||||||||||||||||| |||||||||  ||||||| ||  |||| ||||||||||||||||| || | |    
T  22455097 agagacacaaactgagtagtggaggtactggttgtacacttcgtacaattgtactttgtcaacgcttttcaaaaagcaagcatccaatgccttcaacttc 22454998  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatctca 210  Q
     |   || ||   |||| ||||||||||  ||||||||||||| || | || |||||||||||||||| | || ||| ||||||| |||||  |||||      
T  22454997 atttgaattaactgttgcttcactcttctggtcttctgcaatg-ttgggcgtgattaaatccattgaacacccttttgaagctttaagtctctcatcttc 22454899  T
Q  211 tgatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    ||| ||| |  ||||||| ||||||||||||||| |||||    
T  22454898 tgaagaacttcagcttctggtgatcttcagcttctgatga 22454859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 35744107 - 35743858
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||| |||||||||| |||| |||||||| ||||||||   ||||| |  |||||||||||||| ||  ||||| ||||||||| ||||||    
T  35744107 agagacaaaaactgagtagtggagatagtagttgtacatttcgtacaaacgtactatgtcaacgctctttgaagaattagcattcaatgccttcaaatcc 35744008  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||||||||||||||||| |  ||| ||||| | |||||||||  || |||  | || | ||  || || | | ||| | ||||| ||  ||||||||| |    
T  35744007 ttccaaaatagtcgttgctatacttttccaatattctgcaatctttagac--gtttgagtctgttaaacaacttttgacgctttaag--ttgcatctcct 35743912  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || ||||||| ||||| ||||||||| ||| ||||||||||||||||    
T  35743911 gatgaactacagcttctggtgattttcagcttccgataaacttgcttctgatga 35743858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 265
Target Start/End: Complemental strand, 30557414 - 30557175
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctc-tttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtc 124  Q
    |||||||||||||||||||||||||||||||||   |||||||  |||||||| |||||  |||||||||||||||  || |||| ||| ||||||||||    
T  30557414 agtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgtgttcaaattctttcaaaatagtc 30557315  T
Q  125 gttgtttcactcttccagtcttctgcaatgctttgacgagattaaat-ccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagag 223  Q
    | || |||||| || ||||| |||||||| ||| |||||| || ||| ||||| || |   ||| |||| || ||  |||||||   ||||||| |  ||    
T  30557314 gatgcttcactttttcagtcctctgcaatccttagacgaggttgaatcccattaaacaatttttgaagccttaag--ttgcatcctctgatgaactgcag 30557217  T
Q  224 cttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||| ||||| || |||||| ||||||||||||||||||||    
T  30557216 cttctggtgatatttagcttctgatgaacttgcttctgatga 30557175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 195
Target Start/End: Complemental strand, 41121826 - 41121644
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||  |||||||||||||||||||||||| |||| ||| |||||||||  ||| ||||||  || | |||  |||||||||||| ||||||    
T  41121826 agagacacaaacagagtagtggaggtagtggttgtacatttcgcacaattgtactttgtcaatgctcttcaaagagcaataatccaatgccttcaaatcc 41121727  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagcttt 195  Q
    ||   || ||||| ||| ||||||| |||| ||||||||||||| | | || |||||||||| ||||| ||||||| |||||||    
T  41121726 ttttgaattagtctttgcttcactcatccaatcttctgcaatgc-taggcgtgattaaatcctttgaacagcctttgaagcttt 41121644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 25189391 - 25189579
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||| | |||||||||||||||||||||||| |||||||| |||||||||  ||||||||||  |||| |||| |||||||||||| || | |    
T  25189391 agagacacaaattgagtagtggaggtagtggttgtacatttcgtacaattgtactttgtcaacgctcttcaaaaagcaagaatccaatgccttcaacttc 25189490  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtct 201  Q
     |   || ||||| ||| |||||||| |  |||||||||||||| | |  | |||||||||||||||| | ||||| ||||||| |||||    
T  25189491 atttgaattagtcattgcttcactctcctggtcttctgcaatgc-taggtgtgattaaatccattgaacaacctttgaagctttaagtct 25189579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 154
Target Start/End: Complemental strand, 26619194 - 26619066
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||| |||||||||||||||||||||| |||| ||||| ||||| |||   || || |||||| ||||||||| |||| |||   ||||||| |    
T  26619194 agtagtggagatagtggttgtacacttcgtacaattgtcctttttcaacgttctccaaagaataagcattcaatgccttcaaattcttttgaaatagttg 26619095  T
Q  126 ttgtttcactcttccagtcttctgcaatg 154  Q
    ||| |||| ||||||||||||||||||||    
T  26619094 ttgcttcattcttccagtcttctgcaatg 26619066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 237
Target Start/End: Original strand, 7609039 - 7609180
Alignment:
Q  97 aatgcctttaaatccttccaaaatagtcgttgtttcactcttccag-tcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagcttt 195  Q
    |||||||| |||||||| ||||||||  |||| ||||||| ||  | |||| || ||||||| ||||||||| ||||||||||| |||| || |||||||    
T  7609039 aatgccttcaaatcctttcaaaataggtgttgcttcactcctcttggtcttttgtaatgcttggacgagattgaatccattgaacagcccttgaagcttt 7609138  T
Q  196 gagtcttgcatctcatgatgaaatagagcttctagtgatctt 237  Q
     ||||||||||||| ||||||| |  ||||||| ||||||||    
T  7609139 aagtcttgcatctcctgatgaactttagcttctggtgatctt 7609180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 28551025 - 28550932
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgccttt 105  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || |||||||||||||||||    
T  28551025 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 28550932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 44840427 - 44840520
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgccttt 105  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || |||||||||||||||||    
T  44840427 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 44840520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 22776395 - 22776302
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgccttt 105  Q
    ||||||||||||  |||| ||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || |||||||||||||||||    
T  22776395 agagacaaaaacagagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 22776302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 22781773 - 22781680
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgccttt 105  Q
    ||||||||||||  |||| ||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || |||||||||||||||||    
T  22781773 agagacaaaaacagagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 22781680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 23595674 - 23595532
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| ||||| ||||||||||||| ||||||||||||| |||||||||  |||||  |||   | |||||| |||||||||||| |||| |    
T  23595674 agagacacaaactgagtagaggaggtagtggttctacacttcgtacaattgtactttgtcaacg--cttcagagaacaagaatccaatgccttcaaattc 23595577  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgct 156  Q
     |   || ||||||||| ||||||||||  |||||||||||||||    
T  23595576 atttgaattagtcgttgcttcactcttctggtcttctgcaatgct 23595532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 40332080 - 40332173
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgccttt 105  Q
    ||||||||||||  |||| ||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || |||||||||||||||||    
T  40332080 agagacaaaaacagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 40332173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 3277037 - 3277115
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctt 104  Q
    |||||||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || ||||||||||||||||    
T  3277037 agtagtggagatagtggttgtacacttcgtacaaacgtactatatcaacgctctttgaagaataagcatccaatgcctt 3277115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 14581508 - 14581601
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgccttt 105  Q
    |||||||||| |  || ||||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || |||||||||||||||||    
T  14581508 agagacaaaatcagagaagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 14581601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 31968150 - 31968061
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||   ||| | |  |||||||||||||| || |||||||||||||    
T  31968150 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaatgc 31968061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 1587126 - 1587047
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgccttt 105  Q
    |||||||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| ||  ||||||||||||||||    
T  1587126 agtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaattagcatccaatgccttt 1587047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 154
Target Start/End: Original strand, 22272139 - 22272268
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaa-aaacaagcatccaatgcctttaaatccttccaaaatagtc 124  Q
    |||||||||| ||||||||||||||||| |||| || | ||||| |||| ||||   |  ||| |||||||||||||||| |||||| |   || |||||    
T  22272139 agtagtggagatagtggttgtacacttcttacaattttcctttttcaactctctccaacgaaaaaagcatccaatgccttcaaatccatttgaattagtc 22272238  T
Q  125 gttgtttcactcttccagtcttctgcaatg 154  Q
     ||| |||| ||||||||||||||||||||    
T  22272239 attgcttcattcttccagtcttctgcaatg 22272268  T

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Target: chr2; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 23184411 - 23184346
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgct 77  Q
    ||||||| ||||| ||||| ||||||||||||| ||||||||||||| |||||||||  |||||||    
T  23184411 agagacacaaactgagtagaggaggtagtggttctacacttcgtacaattgtactttgtcaacgct 23184346  T

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Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 154
Target Start/End: Original strand, 44881174 - 44881302
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||| |||||||||||||||||||||| |||| ||||| |||| ||||   | ||| || ||||||||||||| ||| || |   || |||  |    
T  44881174 agtagtggagatagtggttgtacacttcgtacaattgtcctttttcaactctctccaacaaaaaaacatccaatgccttcaaacccatttgaattagctg 44881273  T
Q  126 ttgtttcactcttccagtcttctgcaatg 154  Q
     || |||| ||||||||||||||||||||    
T  44881274 ctgcttcattcttccagtcttctgcaatg 44881302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 19115090 - 19115217
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||| |||||||||||||||||||||| |||| ||||| |||| ||||   |  || | ||||||| || ||| | |||| ||  || |||| |    
T  19115090 agtagtggagatagtggttgtacacttcgtacaattgtcctttttcaacactctccaacgaataggcatccactggcttcacatccatctgaattagttg 19115189  T
Q  126 ttgtttcactcttccagtcttctgcaat 153  Q
    ||| |||| |||||||||||||||||||    
T  19115190 ttgcttcattcttccagtcttctgcaat 19115217  T

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Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 22785748 - 22785669
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgccttt 105  Q
    |||||||||| |||||||| ||||||| |||||   ||||| |  |||||||||||||| || |||||||||||||||||    
T  22785748 agtagtggagatagtggttatacactttgtacaaaagtactatgtcaacgctctttgaagaataagcatccaatgccttt 22785669  T

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Target: chr2; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 23392761 - 23392686
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    |||| |||| ||||||||||||||||||||||| |||||||    ||||||||||||| ||  |||||||||||||    
T  23392761 agtaatggaagtagtggttgtacacttcgtacagttgtactaggtcaacgctctttgagaagaaagcatccaatgc 23392686  T

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Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 154
Target Start/End: Complemental strand, 18431033 - 18430905
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||||| |||||||||||||||||||  ||||  |||||||||| | |   || || |||||| ||||||||| |||| |||   || ||| ||    
T  18431033 agtagtggaggtcgtggttgtacacttcgtactattgtcgttttccaacgttttccaaagaataagcattcaatgccttcaaattcttttgaattagccg 18430934  T
Q  126 ttgtttcactcttccagtcttctgcaatg 154  Q
    ||| ||||  |||| ||||||||||||||    
T  18430933 ttgcttcatgcttctagtcttctgcaatg 18430905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 57
Target Start/End: Complemental strand, 24814676 - 24814645
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtac 57  Q
    ||||||||||||||||||||||||||||||||    
T  24814676 agtagtggaggtagtggttgtacacttcgtac 24814645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 967560 - 967522
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  967560 agacaaaaacagagtagtggaggtagtggttgtacactt 967522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 22763826 - 22763864
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  22763826 agacaaaaacagagtagtggaggtagtggttgtacactt 22763864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 24275197 - 24275235
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  24275197 agacaaaaacagagtagtggaggtagtggttgtacactt 24275235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 27978440 - 27978402
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  27978440 agacaaaaacagagtagtggaggtagtggttgtacactt 27978402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 28064969 - 28064931
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  28064969 agacaaaaacagagtagtggaggtagtggttgtacactt 28064931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 36784862 - 36784824
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  36784862 agacaaaaacagagtagtggaggtagtggttgtacactt 36784824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 38586145 - 38586107
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  38586145 agacaaaaacagagtagtggaggtagtggttgtacactt 38586107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 28374571 - 28374534
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  28374571 gacaaaaacagagtagtggaggtagtggttgtacactt 28374534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 12 - 261
Target Start/End: Original strand, 22675 - 22924
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||| |||| |||| |||||||||  |||| ||||||||| || |||||||||||||||| ||||||    
T  22675 agagacaaaaacagagtagtggaggtagtggttgtacgcttcatacaattgtactttgtcaacactctttgaagaataagcatccaatgccttcaaatcc 22774  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||||| ||||||||||||| |    
T  22775 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 22874  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctg 261  Q
    |||||| || ||| ||| ||||||||||||||| ||||||||||||||||    
T  22875 gatgaactacagcctctggtgatcttcagcttctgatgaacttgcttctg 22924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 6e-77; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 19884695 - 19884947
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  | |||||||| |||||||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||| ||||||    
T  19884695 agagacaaaaacagattagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 19884794  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||| |||| | ||||| ||||||| ||||||||||||| |    
T  19884795 tttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatcca-tgaacatcctttgaagctttaagtcttgcatctcct 19884893  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || ||||||| |||||  |||||||| ||||||||||||||||||||    
T  19884894 gatgaactacagcttctggtgattgtcagcttctgatgaacttgcttctgatga 19884947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 37435653 - 37435428
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| | ||||| |  |||||||||||||| ||||||||||||||||||| ||||||    
T  37435653 agagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaatagtactatgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 37435554  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||| | ||||| ||||||| ||||||||||||| |    
T  37435553 tttcaaaatagtcgttgcttcactcttccaatcttctgcaatgcttggacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 37435454  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    |||||| |  ||||||| ||||||||    
T  37435453 gatgaacttcagcttctggtgatctt 37435428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 36 - 261
Target Start/End: Original strand, 3483738 - 3483963
Alignment:
Q  36 gtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcact 135  Q
    ||||||||||| | ||||||||| |||||||||  |||||||||||||| || |||||||||||||||| |||||||| |||||||||||||| ||||||    
T  3483738 gtagtggttgtgcgcttcgtacaattgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcact 3483837  T
Q  136 cttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttctagtgatc 235  Q
     ||||||||||||||||||||| ||||||||||||||||||||||||  ||| ||||||| ||||||||||||| | ||||| || | ||||| ||||||    
T  3483838 tttccagtcttctgcaatgcttagacgagattaaatccattgaatagtttttgaagctttaagtcttgcatctcttaatgaactataacttctggtgatc 3483937  T
Q  236 ttcagcttcagatgaacttgcttctg 261  Q
    ||||||||| ||||||||||||||||    
T  3483938 ttcagcttctgatgaacttgcttctg 3483963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 16632433 - 16632658
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| | | ||||||||||||||||||||||||||||| |||||||||  ||||||||||  || |||||| |||||||||||| |||||     
T  16632433 agagacacaaactgattggtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagaatccaatgccttcaaatct 16632532  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||| | ||||| ||||||| ||||||||||||| |    
T  16632533 tttcaaaatagtcgttgattcactcttccagtcttctgcaatgcttatacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 16632632  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    |||||| |  ||||||||||||||||    
T  16632633 gatgaactttagcttctagtgatctt 16632658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 12 - 214
Target Start/End: Original strand, 19666365 - 19666567
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  |||| |||||  || |||||| || |||||| || ||||||    
T  19666365 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaactctcttcaaagaacaagtattcaatgctttcaaatcc 19666464  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |    
T  19666465 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaataacctttcaagctttaagtcttgcatctcct 19666564  T
Q  212 gat 214  Q
    |||    
T  19666565 gat 19666567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 29680662 - 29680424
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| | ||| |||||||||| || || |||||||||||||||| |||||||||  ||||||||||  || |||||||||||||||| || ||||||    
T  29680662 agagacacatactgagtagtggagataatgattgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 29680563  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| | |||||  |||||| ||||||||||||| |    
T  29680562 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacaagattaaatccattgaacaacctttggagctttaagtcttgcatctcct 29680463  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    | | || |||||||||| ||||||||||||||| |||||    
T  29680462 ggtaaactagagcttctggtgatcttcagcttctgatga 29680424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 45833387 - 45833625
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    |||||| |||||  |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  || || ||||||||||||| || |||| |    
T  45833387 agagaccaaaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaaaaagcatccaatgcattcaaatac 45833486  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||  |||| || ||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||||| ||||||||||||| |    
T  45833487 tttcaaaatagaagttgcttaactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 45833586  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |||||||||| |||||||| |||||| |||||    
T  45833587 gatgaactagagcttctggtgatctttagcttctgatga 45833625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 3395583 - 3395836
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||| |  ||||||||||  || ||| |||||||||||| || ||||||    
T  3395583 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaactagcatccaatgctttcaaatcc 3395682  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||| || |||| ||||||||||||| ||||| ||| ||||||||||| | | ||| ||| ||| ||||||||||||| |    
T  3395683 tttcaaaatagtcgttgcttcactttttcagttttctgcaatgcttagacgatatttaatccattgaacaacttttgaagatttaagtcttgcatctcct 3395782  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || |||||||||||||||||| |||| ||| ||||||||||||||||    
T  3395783 gatgaactatagcttctagtgatcttcaacttctgataaacttgcttctgatga 3395836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 12 - 238
Target Start/End: Complemental strand, 12811293 - 12811070
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| || ||||||  ||||||| || |||   ||||||||||||||||| ||||||    
T  12811293 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattttactttgtcaacgctattagaa---caagcatccaatgccttcaaatcc 12811197  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| ||||||||| |||||||||||||||||| ||||| | ||||||||||||| | ||||| ||||||| ||||||||||||| |    
T  12811196 tttcaaaatagtcgttgcttcactctttcagtcttctgcaatgcttagacgaaactaaatccattgaacaacctttgaagctttaagtcttgcatctcct 12811097  T
Q  212 gatgaaatagagcttctagtgatcttc 238  Q
     ||||| |||||||||| |||||||||    
T  12811096 aatgaactagagcttctggtgatcttc 12811070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 26 - 263
Target Start/End: Original strand, 56034581 - 56034816
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||| |||| |||||||| ||   ||| |||||||||  |||||||||||||| ||||| ||||||||||||| ||||  || |||||||||||    
T  56034581 agtagtggagatagtagttgtacattttagacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaattatttcaaaatagtcg 56034680  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||||||||||| || |||| ||||||| ||||||||||||  ||||||| |  ||||    
T  56034681 ttgcttcactcttccagtcttctgcaatgcttggacgagattaaatccattgaacagtctttgaagctttaagtcttgcatcttctgatgaacttcagct 56034780  T
Q  226 tctagtgatcttcagcttcagatgaacttgcttctgat 263  Q
    ||| ||||||||  ||||| ||||||||||||||||||    
T  56034781 tctggtgatctt--gcttctgatgaacttgcttctgat 56034816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 12601102 - 12601291
Alignment:
Q  20 aaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaa 119  Q
    ||||| |||||||||| |||||||||||||||||||||| ||||||| |  ||||||||||  || ||||||||||||||||||| |||||||| |||||    
T  12601102 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcctttcaaaa 12601201  T
Q  120 tagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctc 209  Q
    ||||||||| |||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||||||| | ||||| |||||||||||||    
T  12601202 tagtcgttgattcactattcaagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgacgctttaagtcttgcatctc 12601291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 22675632 - 22675455
Alignment:
Q  18 aaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaa 117  Q
    ||||||| ||||||||||||||||||||||||||| ||||| |||||||||  |||||||||||||| |||||||||| |||||||| |||||||| |||    
T  22675632 aaaaactgagtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctttgaagaacaagcatcaaatgccttcaaatcctttcaa 22675533  T
Q  118 aatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagcttt 195  Q
    | ||||||||| |||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||    
T  22675532 actagtcgttgcttcacttttctagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagcttt 22675455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 37985730 - 37985525
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||| |  ||||||||||  || ||||||||||||||||||| ||||||    
T  37985730 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 37985631  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| |||||| || ||||||||||| |||||| || |||||||||||||||||| | ||||| ||||||| |||||||||||||||    
T  37985630 tttcaaaatagttgttgcttcactttttcagtcttctgcgatgcttagatgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcat 37985531  T
Q  212 gatgaa 217  Q
    ||||||    
T  37985530 gatgaa 37985525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 13576232 - 13575996
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  || |||||| ||||||||| ||||||||||||| ||||||| |  |||||||||||||| |||||||||| |||||||| ||||||    
T  13576232 agagacaaaaacagagcagtggatgtagtggttttacacttcgtacagttgtactatgtcaacgctctttgaagaacaagcatctaatgccttcaaatcc 13576133  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| ||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| || |||| |||||||   | ||||||||| |    
T  13576132 tttcaaactaggcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaggctttgaagcttt--atgttgcatctcct 13576035  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |  ||||||| ||||| ||||||||| |||||    
T  13576034 gatgaactgcagcttctggtgattttcagcttctgatga 13575996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 26 - 265
Target Start/End: Original strand, 413009 - 413246
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    ||||||||||| ||||||||||||||||||||| | |||||||  |||||||||||||| ||||| ||| ||||||||| |||||||| |||| ||| ||    
T  413009 agtagtggaggcagtggttgtacacttcgtacaatcgtactttgtcaacgctctttgaagaacaaacattcaatgccttcaaatcctttcaaattagccg 413108  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| |||||| ||| ||||||||||||||||| ||||||||| ||||||||||| | | ||| ||||||| ||  ||| ||||| ||||||| |  ||||    
T  413109 ttgcttcacttttcgagtcttctgcaatgcttagacgagattgaatccattgaacaacttttgaagctttaag--ttgaatctcctgatgaactgcagct 413206  T
Q  226 tctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||| ||||| ||||||||| ||||||||||||||||||||    
T  413207 tctggtgattttcagcttctgatgaacttgcttctgatga 413246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 12 - 244
Target Start/End: Original strand, 10072928 - 10073159
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||| |||||||||  |||||||||||||| ||||||| ||||||||||| ||||||    
T  10072928 agagacaaaaacatagtagtggagatagtggttgtacacttcgtacatttgtactttgtcaacgctctttgaataacaagcctccaatgccttcaaatcc 10073027  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| |||  |||| |||||| |||||||||||||| ||||||  ||||||||||||||| |||| | ||||| ||||||| ||||||||||||| |    
T  10073028 tttcaaactagcagttgcttcacttttccagtcttctgctatgcttaaacgagattaaatcca-tgaacaacctttgaagctttaagtcttgcatctcct 10073126  T
Q  212 gatgaaatagagcttctagtgatcttcagcttc 244  Q
    |||||| ||  |||||| || || |||||||||    
T  10073127 gatgaactactgcttctggtaattttcagcttc 10073159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 14 - 217
Target Start/End: Complemental strand, 14605023 - 14604819
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcctt 113  Q
    ||||||||||  ||||||||||||||||||||||||||||||||| |||||||||  ||||||||||  || |||||||||||||||| || ||||||||    
T  14605023 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcctt 14604924  T
Q  114 ccaaaa-tagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatg 212  Q
      |||| |||| |||| |||||||||| ||||||||||||||||| ||||||||| ||||||| ||||||||||| ||||||| ||||||| ||||| ||    
T  14604923 ttaaaaatagttgttgcttcactcttctagtcttctgcaatgcttagacgagattgaatccatagaatagcctttgaagctttaagtcttggatctcctg 14604824  T
Q  213 atgaa 217  Q
    |||||    
T  14604823 atgaa 14604819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 10692844 - 10693095
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||||||||||||||||||||| ||||   |||||||   ||||||||||||| ||||||||||||||||||| ||||||    
T  10692844 agagacaaaaacagagtagtggaggtagtggttgtacacttcatacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcc 10692943  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| |||||| |||||||||||||||||  || |||||| || ||||| || || | | ||| ||||||| ||  ||||||||| |    
T  10692944 tttcaaaatagttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacaacttttgaagctttaag--ttgcatctcct 10693041  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || ||||||| |||||  |||||||| ||||||||||||||||||||    
T  10693042 gatgaactacagcttctggtgattctcagcttctgatgaacttgcttctgatga 10693095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 10906610 - 10906861
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||||||||||||||||||||| ||||   |||||||   ||||||||||||| ||||||||||||||||||| ||||||    
T  10906610 agagacaaaaacagagtagtggaggtagtggttgtacacttcatacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcc 10906709  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| |||||| |||||||||||||||||  || |||||| || ||||| || || | | ||| ||||||| ||  ||||||||| |    
T  10906710 tttcaaaatagttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacaacttttgaagctttaag--ttgcatctcct 10906807  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || ||||||| |||||  |||||||| ||||||||||||||||||||    
T  10906808 gatgaactacagcttctggtgattctcagcttctgatgaacttgcttctgatga 10906861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 26 - 265
Target Start/End: Original strand, 17247251 - 17247487
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    ||||||||||| ||||||||||||||||||||| |||||||||  ||| | |||||||| ||||| ||| ||||||||| |||||||| |||| ||||||    
T  17247251 agtagtggaggcagtggttgtacacttcgtacaattgtactttgtcaatgttctttgaagaacaaacattcaatgccttcaaatcctttcaaattagtcg 17247350  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| |||||| ||||| ||||||||||||||| ||||||||| ||||||||||| | | ||| ||||||| ||   | |||||| ||||||| |  ||||    
T  17247351 ttgcttcact-ttccaatcttctgcaatgcttagacgagattgaatccattgaacaacttttgaagctttaag--attcatctcctgatgaactgcagct 17247447  T
Q  226 tctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||| ||||| ||||||||| ||||||||||||||||||||    
T  17247448 tctggtgattttcagcttctgatgaacttgcttctgatga 17247487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 12 - 204
Target Start/End: Original strand, 9140905 - 9141097
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||||| ||||||| |  ||||||||||  || ||||||||||||||||||| ||||||    
T  9140905 agagacacaaactgagtagtgaagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 9141004  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgc 204  Q
    || |||||||||||||| || ||| |||||||||||| |||||||| ||||||||| ||||||||||| | || || ||||||| ||||||||    
T  9141005 tttcaaaatagtcgttgctttacttttccagtcttctacaatgcttagacgagattgaatccattgaacaacccttgaagctttaagtcttgc 9141097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 19911991 - 19911760
Alignment:
Q  20 aaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaa-aacaagcatccaatgcctttaaatccttccaaa 118  Q
    ||||| ||||||||||||||||||||||||||| ||||| || |||| |  ||||||||||| ||| || ||||||||||||| || |||||||| ||||    
T  19911991 aaactgagtagtggaggtagtggttgtacactttgtacaattatactatgtcaacgctctttcaaagaataagcatccaatgctttcaaatcctttcaaa 19911892  T
Q  119 atagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaa 218  Q
    |||||||||| ||||||  ||  ||||| |||||||||| ||||||||| |||| |||||| | ||||| ||||||| ||||||||||||| |||||||     
T  19911891 atagtcgttgcttcactgctctggtcttttgcaatgcttggacgagattgaatctattgaacaacctttaaagctttaagtcttgcatctcctgatgaac 19911792  T
Q  219 tagagcttctagtgatcttcagcttcagatga 250  Q
    || | |||||  |||||||||||||| |||||    
T  19911791 tacaacttctgatgatcttcagcttctgatga 19911760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 72 - 249
Target Start/End: Original strand, 14833449 - 14833626
Alignment:
Q  72 aacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaat 171  Q
    |||||||||  || |||||||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||    
T  14833449 aacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattgaat 14833548  T
Q  172 ccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttctagtgatcttcagcttcagatg 249  Q
    | |||||| | ||||| ||||||| ||||||||||||| ||||||| || | ||||| | ||||||||||||| ||||    
T  14833549 ctattgaacatcctttgaagctttaagtcttgcatctcctgatgaattacaacttctggagatcttcagcttctgatg 14833626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 12 - 240
Target Start/End: Complemental strand, 14904474 - 14904246
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| ||| |||||| || |||||||  |||||||||| ||||||| |  ||||||||||  || || |||||||||||| ||| ||||||    
T  14904474 agagacacaaactgagtggtggagataatggttgtttacttcgtacaattgtactatgtcaacgctcttcaaagaataagcatccaatgtcttcaaatcc 14904375  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||| | ||||| |||||| ||||||||||||||||||| | ||||||||||||||| ||||||||| ||| |||||||  |||||||||||| |    
T  14904374 tttcaaaatggacgttgcttcacttttccagtcttctgcaatgcctagacgagattaaatcctttgaatagcttttgaagctttaggtcttgcatctcct 14904275  T
Q  212 gatgaaatagagcttctagtgatcttcag 240  Q
    |||||| || | ||||| |||||||||||    
T  14904274 gatgaactacaacttctggtgatcttcag 14904246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 19621179 - 19620974
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| | |||||||| |||||||||||||||||||||| ||||||| |  ||||||||||   | |||||||||||||||| || ||||||    
T  19621179 agagacacaaactgaatagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcatagaacaagcatccaatgctttcaaatcc 19621080  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| ||||||  ||  ||||| |||||||||| ||||||||| ||||||||||| | ||||| ||||||| | ||||||||||| |    
T  19621079 tttcaaaatagtcgttgcttcacttctctggtcttttgcaatgcttggacgagattgaatccattgaacaacctttgaagctttaactcttgcatctcct 19620980  T
Q  212 gatgaa 217  Q
    ||||||    
T  19620979 gatgaa 19620974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 6517478 - 6517729
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || |||||||  |||| ||  |||||    
T  6517478 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatctcatgctttccaatcc 6517577  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||||||||||||||||| |  ||| |||||||||||||||||  || |||||| || ||||| || |||| | ||| ||||||| ||  ||||||||| |    
T  6517578 ttccaaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcctttaaataacttttgaagctttaag--ttgcatctcct 6517675  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || | ||||| |||||  |||||||| ||||||||||||||||||||    
T  6517676 gatgaactacaacttctggtgattctcagcttctgatgaacttgcttctgatga 6517729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 209
Target Start/End: Original strand, 55380283 - 55380480
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||| |  ||||||||||  || |||||||||||||||| || ||||||    
T  55380283 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 55380382  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatctc 209  Q
    || ||||||||| |||| ||||||||||  ||||||||||||| || | |  |||||||||||||||| |||| ||| ||||||| |||||||||||||    
T  55380383 tttcaaaatagttgttgcttcactcttctggtcttctgcaatg-ttaggcatgattaaatccattgaacagccttttgaagctttaagtcttgcatctc 55380480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 176
Target Start/End: Original strand, 29121363 - 29121527
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||   |||||||  ||||||||||| || |||||||||||| |||||| ||||||    
T  29121363 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttaaagaacaagcatccagtgccttcaaatcc 29121462  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccatt 176  Q
    || |||||||||||||| |||||| || ||||||||||||||  || |||||| || ||||||||    
T  29121463 tttcaaaatagtcgttgcttcactttttcagtcttctgcaatctttagacgaggttgaatccatt 29121527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 250
Target Start/End: Original strand, 54679937 - 54680157
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||||||||||||||||||||||||||   |||||||  ||| |||||||||| ||||| ||||||||||||| |||||||| ||||||||| |    
T  54679937 agtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctctttgaagaacaaacatccaatgccttcaaatcctttcaaaatagttg 54680036  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| |||||| |||||||||||||||||  || |||||| || |  ||||| || ||| ||| ||||||| ||  ||||||||| ||||||| |  ||||    
T  54680037 ttgcttcacttttccagtcttctgcaatcattagacgagtttga--ccattaaacagcttttgaagctttaag--ttgcatctcctgatgaactgcagct 54680132  T
Q  226 tctagtgatcttcagcttcagatga 250  Q
    ||| ||||| ||||||||| |||||    
T  54680133 tctggtgattttcagcttctgatga 54680157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 20 - 250
Target Start/End: Original strand, 40846100 - 40846330
Alignment:
Q  20 aaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaa 119  Q
    ||||| |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  |||| |||||||||||||| || || | | |   ||     
T  40846100 aaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaagcaagcatccaatgctttcaacttcatttgaat 40846199  T
Q  120 tagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatctcatgatgaaa 218  Q
    ||||||||| |||||| | |  |||||||||||||| | | || |||||||||||||||| |||| ||| ||||||| |||||  |||||  |||||||     
T  40846200 tagtcgttgcttcactttcctggtcttctgcaatgc-taggcgtgattaaatccattgaacagccttttgaagctttaagtctctcatcttctgatgaac 40846298  T
Q  219 tagagcttctagtgatcttcagcttcagatga 250  Q
    |  ||||||  ||||||||||||||| |||||    
T  40846299 ttcagcttccggtgatcttcagcttctgatga 40846330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 6641677 - 6641898
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||||| |||||||||  ||||||||||  || |||||| ||| |||||||| ||||||    
T  6641677 agagacataaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagtatcaaatgccttcaaatcc 6641776  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||   || ||| ||||||||||||||||   |||||| |||||| | | |  |||||||||| ||||| | ||||| ||||||| | |||  |||||  |    
T  6641777 ttttgaattagccgttgtttcactcttctgatcttctacaatgc-taggcatgattaaatcctttgaacaacctttgaagctttaaatctctcatcttct 6641875  T
Q  212 gatgaaatagagcttctagtgat 234  Q
    ||||||||  ||||||| |||||    
T  6641876 gatgaaattcagcttctggtgat 6641898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 163
Target Start/End: Original strand, 8105644 - 8105782
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctcttt-gaaaaacaagcatccaatgcctttaaatccttccaaaatagtc 124  Q
    |||||||||||||||||||||||| ||||||||   |||||||  ||||||||||| ||  |||||||||||||||| || |||||||| |||||||| |    
T  8105644 agtagtggaggtagtggttgtacatttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagcc 8105743  T
Q  125 gttgtttcactcttccagtcttctgcaatgctttgacga 163  Q
    |||| |||| | ||||||||||||||||| ||| |||||    
T  8105744 gttgcttcaattttccagtcttctgcaatccttagacga 8105782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 16940012 - 16940172
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttc 114  Q
    |||||||||  || ||||||| ||||||||||||||||||||||   ||||| |  |||||||| ||||| || |||||| |||||||||| |||||||     
T  16940012 gacaaaaacatagcagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctccttgaagaataagcattcaatgcctttcaatccttt 16940111  T
Q  115 caaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccatt 176  Q
    |||||||||||||| |  ||| ||||||||||||||||| ||| |||||| || ||||||||    
T  16940112 caaaatagtcgttgctatacttttccagtcttctgcaat-cttagacgagtttgaatccatt 16940172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 154
Target Start/End: Original strand, 11915707 - 11915835
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||||  |||||||||||||| ||||| |||| ||||||||||||||||  || || |||||||||||||||| |||||| |   |||||||||    
T  11915707 agtagtggaggcggtggttgtacactttgtacaattgtccttttccaacgctcttcaaagaataagcatccaatgccttcaaatccatttgaaatagtcg 11915806  T
Q  126 ttgtttcactcttccagtcttctgcaatg 154  Q
    ||| |||||||||  ||||||||||||||    
T  11915807 ttgcttcactcttttagtcttctgcaatg 11915835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 25651208 - 25651084
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    ||||||||||||||||||||||||||| |||||   |||||    |||||||||||||| || |||||| ||||||||| ||||||||||||||||| ||    
T  25651208 agtagtggaggtagtggttgtacactttgtacaaacgtactacgtcaacgctctttgaagaataagcattcaatgccttcaaatccttccaaaatagccg 25651109  T
Q  126 ttgtttcactcttccagtcttctgc 150  Q
    ||| |||||| ||| ||||||||||    
T  25651108 ttgcttcacttttcaagtcttctgc 25651084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 250
Target Start/End: Original strand, 23123528 - 23123662
Alignment:
Q  116 aaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatg 215  Q
    ||||||||| ||| ||||||||| ||||||||| |||| ||| ||||||||||||| ||||||| |  |||| ||||||| ||||||||||||| |||||    
T  23123528 aaaatagtcattgcttcactctttcagtcttctacaatacttagacgagattaaattcattgaacaatctttgaagctttaagtcttgcatctcctgatg 23123627  T
Q  216 aaatagagcttctagtgatcttcagcttcagatga 250  Q
    || |  ||||||| ||||||||| ||||| |||||    
T  23123628 aacttcagcttctggtgatcttctgcttctgatga 23123662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 16853496 - 16853595
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||||||||||||||||||||| ||||  ||||||||  |||||||||||||  |||||||||||||||| || ||||||    
T  16853496 agagacaaaaacagagtagtggaggtagtggttgtacacttcatacagatgtactttgtcaacgctctttgaggaacaagcatccaatgctttcaaatcc 16853595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 173
Target Start/End: Complemental strand, 56533166 - 56533018
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctcttt-gaaaaacaagcatccaatgcctttaaatccttccaaaatagtc 124  Q
    ||||||||| |||||||||||||||||||||||   |||||||  ||||||||||| ||  ||||| |||| ||||| || |||||||| |||||||| |    
T  56533166 agtagtggaagtagtggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaaacatctaatgcattcaaatcctttcaaaatagcc 56533067  T
Q  125 gttgtttcactcttccagtcttctgcaatgctttgacgagattaaatcc 173  Q
    |||| |||| | || |||||||||||||| ||| |||||| || |||||    
T  56533066 gttgcttcattttttcagtcttctgcaatccttagacgaggttgaatcc 56533018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 3105537 - 3105335
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||    |||| |  |||||||||||||| || || |||||||| | ||| |||||    
T  3105537 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacatactatgtcaacgctctttgaagaataaccatccaatacttttcaatcc 3105438  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||| |||||    ||| ||||||||||||||||| ||| |||||| || ||||| |  || ||| ||| ||||||| ||  ||||||||| |    
T  3105437 tttcaaaatagccgttggaatacttttccagtcttctgcaat-cttagacgagtttgaatccttgaaacagcttttgaagctttaag--ttgcatctcct 3105341  T
Q  212 gatgaa 217  Q
    ||||||    
T  3105340 gatgaa 3105335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 17398792 - 17398699
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgccttt 105  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || |||||||||||||||||    
T  17398792 agagacaaaaacagagtagtggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 17398699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 23750515 - 23750751
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctt-tgaaaaacaagcatccaatgcctttaaatc 110  Q
    ||||||| ||||| |||||||||| || ||||||||||||||||||| |||||||||    |||| |||   ||||||||||||| ||||||||||| |     
T  23750515 agagacacaaactgagtagtggagataatggttgtacacttcgtacaattgtacttt---gacgcacttcataaaaacaagcatcaaatgcctttaactt 23750611  T
Q  111 cttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatctc 209  Q
    | |   ||  |||||||| |||||||| |  |||||||||| ||| | | || |||||||||||||||| | || ||| ||||||| |||||||||||||    
T  23750612 catttgaagcagtcgttgcttcactctcctggtcttctgcagtgc-taggcgtgattaaatccattgaacaaccttttgaagctttaagtcttgcatctc 23750710  T
Q  210 atgatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
     ||||||| |  ||||||| || ||||| | |||| |||||    
T  23750711 ctgatgaacttcagcttctggttatctttaacttctgatga 23750751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 15139291 - 15139453
Alignment:
Q  83 aaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatag 182  Q
    |||| ||||||||||||||||| || | | |   || ||||||||| |||||||| |  ||||||||||||||||  |||||||||||||||||||| |     
T  15139291 aaaagcaagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctcctggtcttctgcaatgcttaaacgagattaaatccattgaacaa 15139390  T
Q  183 cctttcaagctttgagtcttgcatctcatgatgaa-atagagcttctagtgatcttcagcttc 244  Q
    ||||| || |||| |||||  |||||  |||||||  |  ||||||| |||||||||||||||    
T  15139391 cctttgaatctttaagtctatcatcttctgatgaacttttagcttctggtgatcttcagcttc 15139453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 22190839 - 22190928
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||   ||||| |  |||||||||||||| ||  ||||||||||||    
T  22190839 agagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaatcagcatccaatgc 22190928  T

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Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 38513871 - 38513960
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||||||||  ||||||| | ||||||||||||||||||||||| | ||||| |  |||||||||||||| ||  | ||||||||||    
T  38513871 agagacaaaaacagagtagtgaaagtagtggttgtacacttcgtacaatcgtactatgtcaacgctctttgaagaattaacatccaatgc 38513960  T

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Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 40860660 - 40860749
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||||||||  ||||||||| ||||||||||||||| || ||||   ||||| |  |||||||||||||| || |||||||||||||    
T  40860660 agagacaaaaacagagtagtggaagtagtggttgtacacatcatacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 40860749  T

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Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 5873584 - 5873622
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  5873584 agacaaaaacaaagtagtggaggtagtggttgtacactt 5873622  T

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Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 33378406 - 33378489
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgccttt 105  Q
    ||||||||||  ||||||||||||||||||||||||||        |||||||||  |||| |||||||||  |||||||||||||||||||    
T  33378406 agacaaaaacagagtagtggaggtagtggttgtacact--------ttgtactttgtcaactctctttgaaggacaagcatccaatgccttt 33378489  T

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Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 9751658 - 9751569
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||||||||  ||||||||| |||||||||||||||||||| ||    |||| |  |||||||||||||| ||  ||||||||||||    
T  9751658 agagacaaaaacagagtagtggaagtagtggttgtacacttcgtgcaaacatactatgtcaacgctctttgaagaattagcatccaatgc 9751569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 17788164 - 17788067
Alignment:
Q  14 agacaaaaacta-agtagtggaggtagtggttgtacacttcgtacacttgtac-ttttccaacgctctttgaaaaacaagcatccaatgcctttaaat 109  Q
    ||||||||| || |||||||||| |||||||||||||| ||||||| |||| | |||||||||| |||   || || ||||||| |||||||||||||    
T  17788164 agacaaaaaatagagtagtggagatagtggttgtacacatcgtacaattgtcctttttccaacgttctccaaagaataagcatctaatgcctttaaat 17788067  T

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Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 176
Target Start/End: Original strand, 55731836 - 55731936
Alignment:
Q  75 gctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatcca 174  Q
    |||||||||| || ||||||||||| |||| |||||||| |||||||||||||| || ||   ||||||||| ||||||  || |||||| || ||||||    
T  55731836 gctctttgaagaataagcatccaat-ccttcaaatcctttcaaaatagtcgttgatttacctctccagtcttttgcaattgttagacgagtttgaatcca 55731934  T
Q  175 tt 176  Q
    ||    
T  55731935 tt 55731936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 1672396 - 1672428
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtaca 58  Q
    |||||||||||||||||||||||||||||||||    
T  1672396 agtagtggaggtagtggttgtacacttcgtaca 1672428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 1674871 - 1674903
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtaca 58  Q
    |||||||||||||||||||||||||||||||||    
T  1674871 agtagtggaggtagtggttgtacacttcgtaca 1674903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 3793303 - 3793367
Alignment:
Q  201 ttgcatctcatgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||||| ||||||| |  ||||||||||||| ||||||||| | ||||||||||| ||||||    
T  3793303 ttgcatctcctgatgaactgcagcttctagtgattttcagcttctggtgaacttgcttttgatga 3793367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 3499756 - 3499682
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatg 100  Q
    |||||| || |||||||||||||||||||||||  |||||| |  |||||||| ||||| ||  |||||||||||    
T  3499756 agtagtagaagtagtggttgtacacttcgtacaaatgtactatgtcaacgctcattgaagaaatagcatccaatg 3499682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 8685547 - 8685509
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgta 64  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  8685547 agtagtggagatagtggttgtacacttcgtacaattgta 8685509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 11515250 - 11515288
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  11515250 agacaaaaacagagtagtggaggtagtggttgtacactt 11515288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 11536060 - 11536098
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  11536060 agacaaaaacagagtagtggaggtagtggttgtacactt 11536098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 260
Target Start/End: Complemental strand, 14153912 - 14153874
Alignment:
Q  222 agcttctagtgatcttcagcttcagatgaacttgcttct 260  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  14153912 agcttctggtgatcttcagcttctgatgaacttgcttct 14153874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 20977450 - 20977496
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtaca 58  Q
    ||||||||||||  ||||||| || ||||||||||||||||||||||    
T  20977450 agagacaaaaacagagtagtgcagatagtggttgtacacttcgtaca 20977496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 39419852 - 39419806
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtaca 58  Q
    ||||||||||||  |||| |||| |||||||||||||||||||||||    
T  39419852 agagacaaaaacagagtaatggaagtagtggttgtacacttcgtaca 39419806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 49002023 - 49001985
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  49002023 agacaaaaacagagtagtggaggtagtggttgtacactt 49001985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 55651539 - 55651577
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  55651539 agacaaaaacagagtagtggaggtagtggttgtacactt 55651577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 4987489 - 4987526
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  4987489 gacaaaaacagagtagtggaggtagtggttgtacactt 4987526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 10909624 - 10909661
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  10909624 gacaaaaacagagtagtggaggtagtggttgtacactt 10909661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 16305322 - 16305359
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  16305322 gacaaaaacagagtagtggaggtagtggttgtacactt 16305359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 16317546 - 16317583
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  16317546 gacaaaaacagagtagtggaggtagtggttgtacactt 16317583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 17540402 - 17540455
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctct 79  Q
    |||||||||| || ||||||||||||||||||| |||| ||||| |||| ||||    
T  17540402 agtagtggagataatggttgtacacttcgtacaattgtcctttttcaacactct 17540455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 19581456 - 19581493
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  19581456 gacaaaaacagagtagtggaggtagtggttgtacactt 19581493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 24713646 - 24713683
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  24713646 gacaaaaacagagtagtggaggtagtggttgtacactt 24713683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 154
Target Start/End: Complemental strand, 41114863 - 41114746
Alignment:
Q  37 tagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactc 136  Q
    ||||||||||||||  |||||| |||| ||||| |||| ||||   | ||| |||||||||||||||| |||| | |   |||||| ||||| |||| ||    
T  41114863 tagtggttgtacacgacgtacaattgtcctttttcaactctctccaacaaaaaagcatccaatgccttcaaattcatttgaaatagccgttgcttcattc 41114764  T
Q  137 ttccagtcttctgcaatg 154  Q
    ||| |||||| |||||||    
T  41114763 ttctagtcttttgcaatg 41114746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 4e-72; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 41566576 - 41566323
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||| |  ||||||||||  || || || ||||||||||||| ||||||    
T  41566576 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatatcaacgctcttcaaagaataaacatccaatgccttcaaatcc 41566477  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||| ||||| |||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||||| |    
T  41566476 tttcaaaatagacgttgcttcacttttctagtcttctgcaatgcttagacgagattaaatccattgaatagcttttgaagctttaagtcttgcatctcct 41566377  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || | |||||  |||||||||||||| ||||||||||||||||||||    
T  41566376 gatgaactacaacttctgatgatcttcagcttctgatgaacttgcttctgatga 41566323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 33022659 - 33022910
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| ||||| ||||||||||||| ||||||    
T  33022659 agagacaaaaacatagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgccttcaaatcc 33022758  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| ||||||||| |||||| ||||||||||||||||||||| || |||||||||||||||||| ||||||| |||||||   | ||||||||| |    
T  33022759 tttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagatgagattaaatccattgaacagcctttgaagcttt--atgttgcatctcct 33022856  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  |  |||| ||||| ||||||||| ||||||||||||||||||||    
T  33022857 gatgaactgcaaattctggtgattttcagcttctgatgaacttgcttctgatga 33022910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 23413116 - 23412865
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||| |  ||||||||||  ||||||||||||||||||| || ||||||    
T  23413116 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaaaaacaagcatccaatgctttcaaatcc 23413017  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||| |||||| ||||||||||  |||||||||||||||| || |||||||||||||||||| | ||||| ||||||| ||||||||||||| |    
T  23413016 tttcaaaataatcgttgcttcactcttctggtcttctgcaatgcttggatgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 23412917  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| ||||||||  ||||| ||||||||||||||||||||    
T  23412916 gatgaacttcagcttctggtgatctt--gcttctgatgaacttgcttctgatga 23412865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 17814963 - 17815188
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| ||||||||||||||| |||||| |||||||||  ||||||||||  || |||||||||| ||||| || ||||||    
T  17814963 agagacacaaactgagtagtggagatagtggttgtacactccgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgctttcaaatcc 17815062  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || || ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||| ||||||||||||| |    
T  17815063 tttcagaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatctctt 17815162  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    ||||||||  ||||||| ||||||||    
T  17815163 gatgaaatttagcttctggtgatctt 17815188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 6512570 - 6512322
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||||| |||||||||  ||||||||||  || |||||||   ||||||||| ||||||    
T  6512570 agagacacaaactgagtagtgaagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagc---caatgccttcaaatcc 6512474  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||| |||| | ||||| ||||||| ||||||||||||| |    
T  6512473 tttcaaaatagtcgttgcttcactcttccagtcttcagcaatgcttagacgagattaaatccactgaacaacctttgaagctttaagtcttgcatctcct 6512374  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || | ||||||||||||||  ||||| ||||||||||||||||||||    
T  6512373 gatgaactacaacttctagtgatctt--gcttctgatgaacttgcttctgatga 6512322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 7745835 - 7745610
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||| ||||||    
T  7745835 agagacaaaaaccgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 7745736  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| |||||||||| |||||||| |||||||| || | |||||||||||||||| | ||||| ||||||| |||||| |||||| |    
T  7745735 tttcaaaatagttgttgcttcactcttctagtcttctccaatgcttggatgcgattaaatccattgaacaacctttgaagctttaagtcttacatctcct 7745636  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    |||| | |  ||||||| ||||||||    
T  7745635 gatgtacttcagcttcttgtgatctt 7745610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 21910551 - 21910776
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  || ||||||||||||||||||| ||||||    
T  21910551 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 21910650  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||| |||||| |||||| |||||||||| || ||||||| |||||||||||||| ||| || ||||||| | ||||| ||||||||||||| |    
T  21910651 tttcaaaataatcgttgcttcacttttccagtcttttgtaatgcttagacgagattaaatcaattcaacagcctttgacgctttaagtcttgcatctcct 21910750  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    |||||| |  ||||||| ||||||||    
T  21910751 gatgaactttagcttctggtgatctt 21910776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 20 - 265
Target Start/End: Original strand, 26784357 - 26784602
Alignment:
Q  20 aaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaa 119  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||| |  ||||||||||  || || ||||||||| | | |  |||||||| |||||    
T  26784357 aaactgagtagtggaggtagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaataagcatccagttcttccaaatcctttcaaaa 26784456  T
Q  120 tagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaat 219  Q
    ||||||||| ||||||  ||  ||||| |||||||||| ||||||||| ||||||||||| ||||||| ||||||| | ||||||||||| || |||| |    
T  26784457 tagtcgttgcttcactgctctggtcttttgcaatgcttggacgagattgaatccattgaacagcctttaaagctttaaatcttgcatctcctgctgaact 26784556  T
Q  220 agagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    | ||||||| ||||||||||||||| ||||||||||||||||||||    
T  26784557 acagcttctggtgatcttcagcttctgatgaacttgcttctgatga 26784602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 20550890 - 20551095
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| ||||| || || |||||||||| || ||||||||||||||||||| |||||     
T  20550890 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtatttgtc-aacgctctttaaagaacaagcatccaatgccttcaaatct 20550988  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatctca 210  Q
    || |||||||||||||| |||||||||| ||| ||||||||||||| |||||||||||| |||||||| | || ||| ||||||| |||||||||||||     
T  20550989 tttcaaaatagtcgttgcttcactcttctagttttctgcaatgcttagacgagattaaaaccattgaacaaccttttgaagctttaagtcttgcatctcc 20551088  T
Q  211 tgatgaa 217  Q
    |||||||    
T  20551089 tgatgaa 20551095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 21072382 - 21072145
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||| ||| |||||||||||||||||||||| ||||||| |  ||||||||||  || |||||||||||||||| || ||||||    
T  21072382 agagacacaaactgagtagtagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcc 21072283  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| ||||||||||  ||||||||||||||| ||| | |||||||||||| ||| | ||||| ||||||| ||||||||||||| |    
T  21072282 tttcaaaatagttgttgcttcactcttctggtcttctgcaatgctgtga-gtgattaaatccatagaacaaccttttaagctttaagtcttgcatctcct 21072184  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |  ||||||| ||||||||||||||| |||||    
T  21072183 gatgaacttcagcttctggtgatcttcagcttctgatga 21072145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 13545654 - 13545448
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    |||||||||||   |||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||| ||||||    
T  13545654 agagacaaaaatagagtagtggaggtggtggttgtacacttcgtacacttgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 13545555  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| |||| |||| |||||        ||||||||||||||| ||||||||||| ||||||||| | ||||| ||||||| ||||||||||||| |    
T  13545554 tttcaaagtagttgttgcttcac--------tcttctgcaatgcttagacgagattaagtccattgaacaacctttgaagctttaagtcttgcatctcct 13545463  T
Q  212 gatgaaatagagctt 226  Q
    |||||| ||||||||    
T  13545462 gatgaactagagctt 13545448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 4887017 - 4887268
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||  |||||||  |||||||||||||| ||||||||||||||||||| |||||     
T  4887017 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacacacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatct 4887116  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |  ||| |||||||||| ||||||  |  ||| || |||||||||||||| | | ||| ||||||| ||  |||||| || |    
T  4887117 tttcaaaatagtcgttgctatacttttccagtcttttgcaatcttaagacaagtttaaatccattgaacaacttttgaagctttaag--ttgcatatctt 4887214  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| |||||  ||||||||  |||||||||||||||||||    
T  4887215 gatgaactgcagcttctggtgattctcagcttctaatgaacttgcttctgatga 4887268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 12 - 237
Target Start/End: Complemental strand, 89564 - 89339
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||| |  ||| ||||||  || ||||||||| |||||| || |||| |    
T  89564 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaatgctcttcaaagaacaagcatgcaatgctttcaaattc 89465  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| ||||||||||  |||||||||||| ||| ||||||||||||||||||||| | | ||| ||||||| ||| ||||||||| |    
T  89464 tttcaaaatagtcgttgcttcactcttctggtcttctgcaattcttagacgagattaaatccattgaacaacttttgaagctttaagttttgcatctcct 89365  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    |||||| || | ||||| ||||||||    
T  89364 gatgaactacaacttctggtgatctt 89339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 11993883 - 11994134
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||   |||||||  |||||||||||||| |||||||||||||||| || ||||||    
T  11993883 agagacaaaaacagagtagtggaagtagtggttgtacacttcgtacatacgtactttgtcaacgctctttgaagaacaagcatccaatgctttcaaatcc 11993982  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
     | |||| ||| ||||| |||||| ||||||||||||||||| ||| |||||| || ||||| ||||| | | ||| || |||| ||  ||||||||| |    
T  11993983 cttcaaattagccgttgcttcactattccagtcttctgcaatccttagacgagtttgaatccgttgaacatcttttgaaactttaag--ttgcatctcct 11994080  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || ||||||| |||||   ||||||| ||| ||||||||||||||||    
T  11994081 gatgaactacagcttctggtgattcacagcttctgataaacttgcttctgatga 11994134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 31117872 - 31118033
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||| ||||||| ||||||||||||||| |||||||||  |||| ||||||||| ||||||||||||||||||| |||| |    
T  31117872 agagacaaaaacagagtagtggaagtagtggatgtacacttcgtacatttgtactttgtcaacactctttgaagaacaagcatccaatgccttcaaattc 31117971  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatcc 173  Q
    || |||| ||||||||| |||||| ||||||||||||||||||||| |||||| ||||||||    
T  31117972 tttcaaattagtcgttgcttcacttttccagtcttctgcaatgcttagacgagtttaaatcc 31118033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 19536443 - 19536237
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||| ||||||| |  ||||||||||  || ||||| |||||||||| || ||||||    
T  19536443 agagacacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaaacatccaatgctttcaaatcc 19536344  T
Q  112 ttccaaaatagtcgttgtttcact-cttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctca 210  Q
     | ||||| |||||||| |||||| |||   ||||| |||||||||| ||||||||| ||||||||||| |||| || ||||||| |||||||||||||     
T  19536343 attcaaaaaagtcgttgcttcactccttttggtcttttgcaatgcttggacgagattgaatccattgaacagcccttgaagctttaagtcttgcatctcc 19536244  T
Q  211 tgatgaa 217  Q
    |||||||    
T  19536243 tgatgaa 19536237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 26 - 269
Target Start/End: Original strand, 15516978 - 15517219
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||||||||||||||||||||||||||   ||||| | ||||| ||||||||| || |||||||||||||||| ||||||||||||||||| ||    
T  15516978 agtagtggaggtagtggttgtacacttcgtacaaaagtactatgccaacactctttgaagaataagcatccaatgccttcaaatccttccaaaatagccg 15517077  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| |  ||| |||||||||||||||||  || |||||| || ||||| ||||| | | ||| ||||||| ||  ||||||||  ||||||| || | ||    
T  15517078 ttgctatacttttccagtcttctgcaatctttagacgagtttgaatccgttgaacaacttttgaagctttaag--ttgcatcttctgatgaactacaact 15517175  T
Q  226 tctagtgatcttcagcttcagatgaacttgcttctgatgatgtc 269  Q
    ||| |||||  ||| |||| ||| ||||||||||||||||||||    
T  15517176 tctggtgattctcaacttctgataaacttgcttctgatgatgtc 15517219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 26 - 265
Target Start/End: Original strand, 26759158 - 26759395
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||||||||||||||||||||||||||    |||| || || ||||||||||| || |||||||||||||||| ||||||||||||||||||||    
T  26759158 agtagtggaggtagtggttgtacacttcgtacaaacttactatttcagcgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagtcg 26759257  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    |||||  ||| |||||||||||||||||  || | |||  || ||||| || || | | ||| ||||||| ||  ||||||||| ||||||| || | ||    
T  26759258 ttgttatacttttccagtcttctgcaatctttaggcgaatttgaatccgttaaacaacttttgaagctttaag--ttgcatctcctgatgaactacaact 26759355  T
Q  226 tctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||| |||||  |||||||| ||| || |||||||||||||    
T  26759356 tctggtgattctcagcttctgataaatttgcttctgatga 26759395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 33933262 - 33933424
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctcttt-gaaaaacaagcatccaatgcctttaaatc 110  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||   ||||| |  ||||||||||| ||  |||||||||||||||| ||||||||    
T  33933262 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactatatcaacgctcttttgaggaacaagcatccaatgcgtttaaatc 33933361  T
Q  111 cttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatcc 173  Q
    ||| ||||||||| |||| |||||| |||||||||| |||||| ||| |||||| || |||||    
T  33933362 ctttcaaaatagttgttgcttcacttttccagtcttttgcaatccttagacgaggttgaatcc 33933424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 29138548 - 29138299
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||  |||||||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || ||||||||||||||||  |||||    
T  29138548 agagacacaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgacaacgctctttgaagaataagcatccaatgccttctaatcc 29138449  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    |||||||||||| |||| |  ||| ||||||||||||||||| ||| |||||  || ||||  || || ||| ||| || |||| ||  ||||||||| |    
T  29138448 ttccaaaatagttgttgctatact-ttccagtcttctgcaat-cttagacgattttgaatctgttaaacagcttttgaaactttaag--ttgcatctcct 29138353  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || | ||||| |||||  |||||||| ||| ||||||||||||||||    
T  29138352 gatgaactacaacttctggtgattctcagcttctgataaacttgcttctgatga 29138299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 265
Target Start/End: Original strand, 42243689 - 42243927
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaa-aacaagcatccaatgcctttaaatccttccaaaatagtc 124  Q
    |||||||||||||||||||||||||||||||||   ||| |||  ||||||||||| ||  ||||| |||| |||| ||| |||||||| |||||||||     
T  42243689 agtagtggaggtagtggttgtacacttcgtacaaacgtattttgtcaacgctcttttaaggaacaaacatcaaatgtcttcaaatcctttcaaaatagtt 42243788  T
Q  125 gttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagc 224  Q
    |||| |||||| |||||||||||||||||  || |||||| || ||||| || || ||| ||| ||||||| ||  ||||||||| ||||||| || |||    
T  42243789 gttgcttcacttttccagtcttctgcaatttttagacgagtttgaatccgttaaacagcttttgaagctttaag--ttgcatctcctgatgaactacagc 42243886  T
Q  225 ttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||| |||||  |||| ||  ||| || |||||||||||||    
T  42243887 ttctggtgattctcagtttttgataaatttgcttctgatga 42243927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 26 - 217
Target Start/End: Original strand, 30742989 - 30743178
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||||||||||||||||||||||||||   |||||||  |||||||||||||| || || ||||||||||||| |||||||| ||||||| |||    
T  30742989 agtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaataaacatccaatgccttcaaatcctttcaaaataatcg 30743088  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaa 217  Q
    ||| ||  |  |||||||||||||||||  || |||||| || |||||||| || | | ||| ||||||| ||  ||||||||| |||||||    
T  30743089 ttgctttgcctttccagtcttctgcaatctttagacgagtttgaatccattaaacaacttttgaagctttaag--ttgcatctcctgatgaa 30743178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 26765507 - 26765634
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    ||||||||||| |||||||||||||||||||||   ||||| || || ||||||||||| || |||||||||||||||| |||||||||||||||||| |    
T  26765507 agtagtggaggcagtggttgtacacttcgtacaaacgtactatttcagcgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagttg 26765606  T
Q  126 ttgtttcactcttccagtcttctgcaat 153  Q
    ||| |  ||| |||||||||||||||||    
T  26765607 ttgctatacttttccagtcttctgcaat 26765634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 12 - 173
Target Start/End: Complemental strand, 14086681 - 14086519
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctcttt-gaaaaacaagcatccaatgcctttaaatc 110  Q
    ||||||||||||  |||||||||||||| ||||||||||||||||||   |||||||  ||||||||||| ||  |||||||||||||||| || |||||    
T  14086681 agagacaaaaacagagtagtggaggtagcggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcattcaaatc 14086582  T
Q  111 cttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatcc 173  Q
      | |||||||| ||||| |||||| ||||||||||||||||| ||| |||||| || |||||    
T  14086581 acttcaaaatagccgttgcttcacttttccagtcttctgcaatccttagacgaggttgaatcc 14086519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 23881062 - 23881299
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||| ||| |||||  ||||||||||  |||| ||||||||||||||||| || | |    
T  23881062 agagacacaaactaagtagtggagatagtggttgtacacttcgtacaattgcactttgtcaacgctcttcaaaaagcaagcatccaatgccttcaacttc 23881161  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatctca 210  Q
     |   || ||||||||| |||||||| |  |||||||||||||| | | || ||||||||||||| || | || ||| ||||||| |||||  |||||      
T  23881162 atttgaattagtcgttgcttcactctcctggtcttctgcaatgc-taggcgtgattaaatccattaaacaaccttttgaagcttt-agtctctcatcttc 23881259  T
Q  211 tgatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    ||||||| |  ||||||| ||| ||||||||||| |||||    
T  23881260 tgatgaacttcagcttctggtgttcttcagcttctgatga 23881299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 3245583 - 3245333
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||| ||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || ||||||| ||||||||| ||| |    
T  3245583 agagacaaaaacagagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcctttcaattc 3245484  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||| ||||| |  ||| ||||||||||||||||| ||| |||||| || ||||| |  || ||  ||  ||||||| ||  ||||||||| |    
T  3245483 tttcaaaatagccgttgctatacttttccagtcttctgcaat-cttagacgagtttgaatccttgaaacagttttggaagctttaag--ttgcatctcct 3245387  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| |||||   ||||||| ||||||||||||||| ||||    
T  3245386 gatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctaatga 3245333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 201
Target Start/End: Complemental strand, 25096954 - 25096777
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttc---caacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatag 122  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    ||||||||||| || ||||||||||||||| ||| ||||||||   || ||     
T  25096954 agtagtggaggtagtggttgtacacttcgtacaattgtccttttttttcaacgctctttaaagaacaagcatccaatgtcttcaaatccttttgaattaa 25096855  T
Q  123 tcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtct 201  Q
    |||||| ||||||||||  |||||||||||||| | | ||  ||||||||| ||||| | ||||| ||||||| |||||    
T  25096854 tcgttgcttcactcttctggtcttctgcaatgc-taggcgtaattaaatcctttgaacaacctttgaagctttaagtct 25096777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 201
Target Start/End: Complemental strand, 25154924 - 25154747
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttc---caacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatag 122  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    ||||||||||| || ||||||||||||||| ||| ||||||||   || ||     
T  25154924 agtagtggaggtagtggttgtacacttcgtacaattgtccttttttttcaacgctctttaaagaacaagcatccaatgtcttcaaatccttttgaattaa 25154825  T
Q  123 tcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtct 201  Q
    |||||| ||||||||||  |||||||||||||| | | ||  ||||||||| ||||| | ||||| ||||||| |||||    
T  25154824 tcgttgcttcactcttctggtcttctgcaatgc-taggcgtaattaaatcctttgaacaacctttgaagctttaagtct 25154747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 12352937 - 12352842
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaa 107  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  |||  ||||||||||||||||||||    
T  12352937 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaatgcaagcatccaatgcctttaa 12352842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 642835 - 642757
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctt 104  Q
    |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  ||||||||||||||||||||||    
T  642835 agtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaaacaagcatccaatgcctt 642757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 30115979 - 30115861
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| ||||||||||||| ||||||||   ||||| |  |||||||||||||| || ||||||| |||||| || |||||    
T  30115979 agagacaaaaacagagtagtggagatagtggttgtacatttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcccttcaatcc 30115880  T
Q  112 ttccaaaatagtcgttgtt 130  Q
    || ||||||||||||||||    
T  30115879 tttcaaaatagtcgttgtt 30115861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 6499234 - 6499326
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctt 104  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  |||| ||||||||| |||||||    
T  6499234 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaagcaagcatccgatgcctt 6499326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 28139602 - 28139718
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||    |||| |  ||||||||| |||| || |||||||||||| |||| |||||    
T  28139602 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacatactatgtcaacgctctatgaagaataagcatccaatgtctttcaatcc 28139701  T
Q  112 ttccaaaatagtcgttg 128  Q
    || ||||||||||||||    
T  28139702 tttcaaaatagtcgttg 28139718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 21099846 - 21099754
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctt 104  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||   |||| ||||  |||  |||||||||||||||||    
T  21099846 agagacacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtaaacgttcttcaaaaggcaagcatccaatgcctt 21099754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 28464481 - 28464240
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||| ||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || |||||||||||||||||          
T  28464481 agagacaaaaacagagtagtagagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt------ 28464388  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
       |||||||| |||||||  ||| ||  ||||||||||||| ||| |||||| || ||||| |  || ||| ||| ||||||| ||  ||| ||||| |    
T  28464387 ---caaaatagccgttgttatacttttttagtcttctgcaat-cttagacgagtttgaatccttgaaacagcttttgaagctttaag--ttgtatctcct 28464294  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| |||||   ||||||| ||| ||||||||||||||||    
T  28464293 gatgaactgcagcttctggtgattcacagcttctgataaacttgcttctgatga 28464240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 21199145 - 21199048
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaat 109  Q
    ||||||| ||||| |||||||||||||||| |||||||||||||||| |||||||||  ||||||| |   || ||| ||||||||||||||| ||||    
T  21199145 agagacacaaactgagtagtggaggtagtgattgtacacttcgtacaattgtactttgtcaacgctttccaaagaacgagcatccaatgccttcaaat 21199048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 9088964 - 9089056
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctt 104  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| ||  |||||||||||||||    
T  9088964 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaattagcatccaatgcctt 9089056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 9398876 - 9398784
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctt 104  Q
    ||||||| ||||| |||||||||| |||||||| ||||||||||||| |||||||||  ||||||||||  ||||  |||||| |||||||||    
T  9398876 agagacacaaactgagtagtggagatagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaaaagtaagcattcaatgcctt 9398784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 25930298 - 25930206
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctt 104  Q
    ||||||||||||  |||||| ||| ||||||||||||| ||||||||   ||||| |  ||||||||||||||||| ||||||||||||||||    
T  25930298 agagacaaaaacagagtagtagagatagtggttgtacaattcgtacaaacgtactatgtcaacgctctttgaaaaataagcatccaatgcctt 25930206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 32160775 - 32160867
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaa 118  Q
    |||||||||||||||||| ||||||||||||||   || ||||  ||||||||||||||  | |||||||||||||||| |||||||| ||||    
T  32160775 agtagtggaggtagtggtcgtacacttcgtacatacgttctttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctttcaaa 32160867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 11208125 - 11208012
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcctt 113  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||| | |||||||  ||||||||||||||     |||||||||||| || |||||  |    
T  11208125 agacaaaaacagagtagtggaggtagtggttatacacttcgtaca-tagtactttgtcaacgctctttgaaggctgagcatccaatgcattcaaatctct 11208027  T
Q  114 ccaaaatagtcgttg 128  Q
     ||||||||||||||    
T  11208026 tcaaaatagtcgttg 11208012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 35932148 - 35932059
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||   ||||| |  |||| ||||||||| || |||||||||||||    
T  35932148 agagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgc 35932059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 10848768 - 10848861
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgccttt 105  Q
    ||||||||||||  |||||||||| |||||||||||||||| |||||   ||| | |  |||||||||||||| || ||||||| |||||||||    
T  10848768 agagacaaaaacagagtagtggagatagtggttgtacactttgtacaaacgtattatgtcaacgctctttgaagaataagcatctaatgccttt 10848861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 17446797 - 17446835
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  17446797 agacaaaaacagagtagtggaggtagtggttgtacactt 17446835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 20417060 - 20417022
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  20417060 agacaaaaacagagtagtggaggtagtggttgtacactt 20417022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 21414300 - 21414338
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  21414300 agacaaaaacagagtagtggaggtagtggttgtacactt 21414338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 32754047 - 32754085
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  32754047 agacaaaaacagagtagtggaggtagtggttgtacactt 32754085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 34062779 - 34062741
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  34062779 agacaaaaacagagtagtggaggtagtggttgtacactt 34062741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 20797853 - 20797816
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  20797853 gacaaaaacagagtagtggaggtagtggttgtacactt 20797816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 21703231 - 21703268
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  21703231 gacaaaaacagagtagtggaggtagtggttgtacactt 21703268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 21706078 - 21706115
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  21706078 gacaaaaacagagtagtggaggtagtggttgtacactt 21706115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 30070009 - 30070046
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  30070009 gacaaaaacagagtagtggaggtagtggttgtacactt 30070046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 5430066 - 5430130
Alignment:
Q  201 ttgcatctcatgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||||| ||||||| |  ||||||| ||||| || | |||| ||||||||||||||||||||    
T  5430066 ttgcatctcctgatgaactgcagcttctggtgatttttaccttctgatgaacttgcttctgatga 5430130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 10848946 - 10849014
Alignment:
Q  201 ttgcatctcatgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatgatgtc 269  Q
    ||||||||||||||||| |  ||||||| |||||   ||||||  ||||||||||||| ||||||||||    
T  10848946 ttgcatctcatgatgaactgcagcttctggtgatacacagcttatgatgaacttgcttttgatgatgtc 10849014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 17457415 - 17457451
Alignment:
Q  16 acaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||  |||||||||||||||||||||||||||    
T  17457415 acaaaaacagagtagtggaggtagtggttgtacactt 17457451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 21660221 - 21660253
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtaca 58  Q
    ||||||||| |||||||||||||||||||||||    
T  21660221 agtagtggaagtagtggttgtacacttcgtaca 21660253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 90167 - 89916
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||||||| |||||||||||||||||||||||| |||  |||||||||||||| ||||||||||||||||||| ||||||    
T  90167 agagacaaaaacagagtagtggaggtaggggttgtacacttcgtacacttgtattttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 90068  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||| ||||| |||||||||||||||||||| ||| ||| ||||||||||||| ||||||  | ||||| ||||||| ||  ||||||||| |    
T  90067 tttcaaaatagccgttggttcactcttccagtcttctgtaatacttagacgagattaaatacattgatcaacctttgaagctttaag--ttgcatctcct 89970  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| ||||| ||||||||| ||||||||||||||||||||    
T  89969 gatgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatga 89916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 134; Significance: 9e-70; HSPs: 4)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 32484 - 32737
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  || |||||||||| ||||| || ||||||    
T  32484 agagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatcaaatgcattcaaatcc 32583  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||| || |||| ||||||| ||||||||||||| |    
T  32584 tttcaaaatagtcgttacttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagtctttgaagctttaagtcttgcatctcct 32683  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || |  || | |||||||| |||||| ||||||||| ||||||||||    
T  32684 gatgaactacaagttgtggtgatctttagcttctgatgaacttacttctgatga 32737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 49331 - 49569
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||| ||||||||||||||||| |||||||||  ||||||||||  || ||||||||||||||||||| ||||||    
T  49331 agagacacaaactgagtagtggagatagttgttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 49430  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| |||||||||| | ||||||||||||||| ||||||||||||||||||||| |  |||| ||||||| || |||||||||| |    
T  49431 tttcaaaatagtagttgcttcactcttcaaatcttctgcaatgcttagacgagattaaatccattgaacaaactttgaagctttaagacttgcatctcct 49530  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| || | ||||| ||||||||||||||| |||||    
T  49531 gatgaactacaacttctggtgatcttcagcttctgatga 49569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 128
Target Start/End: Complemental strand, 443 - 341
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||||||||||| ||||||||||||||   |||||||  ||||||||||||||  | |||||||||||||||| |||||||| |||| ||| ||    
T  443 agtagtggaggtagtggtcgtacacttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctttcaaattagccg 344  T
Q  126 ttg 128  Q
    |||    
T  343 ttg 341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 56860 - 56822
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  56860 agacaaaaacagagtagtggaggtagtggttgtacactt 56822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 12 - 269
Target Start/End: Complemental strand, 27541 - 27286
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||| | |||||||  |||||||||||||| | |||||||||||||||||  |||||    
T  27541 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaatggtactttgtcaacgctctttgaagagcaagcatccaatgccttcgaatcc 27442  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    |  ||||||||  |||| ||||||||| |||||||||||||||||| ||||||||||||| ||||||| | ||||| ||||||| ||||||||||||| |    
T  27441 tatcaaaatagctgttgcttcactctttcagtcttctgcaatgcttagacgagattaaattcattgaacaacctttgaagctttaagtcttgcatctcct 27342  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatgatgtc 269  Q
    |||||| |  ||| ||| ||||||||  ||||| ||||||||||||||||||||||||    
T  27341 gatgaacttcagcatctggtgatctt--gcttctgatgaacttgcttctgatgatgtc 27286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 12 - 243
Target Start/End: Complemental strand, 18733 - 18502
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||| | |||||||||  ||||||||||  || |||||| |||||||||||| ||||||    
T  18733 agagacacaaactgagtagtggagatagtggttgtacacttcgtaaaattgtactttgtcaacgctcttcaaagaacaagtatccaatgccttcaaatcc 18634  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||| | |||||  |||| |    
T  18633 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaaatcttgtgtctcct 18534  T
Q  212 gatgaaatagagcttctagtgatcttcagctt 243  Q
    |||||| |  ||||||| ||||||||||||||    
T  18533 gatgaactgcagcttctggtgatcttcagctt 18502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 250
Target Start/End: Complemental strand, 10223 - 9981
Alignment:
Q  9 agaagagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaa 108  Q
    |||||||||| ||||  |||||||||||||||||| |||||||||||||| |||||||||  ||||||||||| |||||||||||||||||||||| |||    
T  10223 agaagagacacaaacagagtagtggaggtagtggtcgtacacttcgtacaattgtactttgtcaacgctctttaaaaaacaagcatccaatgccttcaaa 10124  T
Q  109 tccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtcttgcatc 207  Q
    ||||| |||||||||||||| |||||||||| |||||||||||| |||| || |||||||||||||||||| | || ||| ||||||| |||||||||||    
T  10123 tcctttcaaaatagtcgttgcttcactcttctagtcttctgcaaagcttagatgagattaaatccattgaacaaccttttgaagctttaagtcttgcatc 10024  T
Q  208 tcatgatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    || ||||||| |  ||||||| ||||| ||||| ||| |||||    
T  10023 tcctgatgaacttcagcttctggtgattttcagtttctgatga 9981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 14887 - 14816
Alignment:
Q  9 agaagagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctt 80  Q
    |||||||||| ||||  |||||||||||||||||| |||||||||||||| |||||||||  ||||||||||    
T  14887 agaagagacacaaacagagtagtggaggtagtggtcgtacacttcgtacaattgtactttgtcaacgctctt 14816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 1689 - 1914
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||  ||  |||||||||||||||||| ||||||    
T  1689 agagacacaaactaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagtacaagcatccaatgccttcaaatcc 1788  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||||| |||||||||| || |    
T  1789 tttcaaaatagttgttgcttcactcctccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatttcct 1888  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
     ||||  |  ||||||||||||||||    
T  1889 aatgatttttagcttctagtgatctt 1914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 31 - 243
Target Start/End: Complemental strand, 5040 - 4828
Alignment:
Q  31 tggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtt 130  Q
    ||||||||||||||||||||||| |||| |||||||||  ||||||||| | || ||||| ||||||||||||| |||||||| |||||||||||| | |    
T  5040 tggaggtagtggttgtacacttcatacaattgtactttgtcaacgctctataaagaacaaacatccaatgccttcaaatcctttcaaaatagtcgtcgct 4941  T
Q  131 tcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttctag 230  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||||||| ||||||| ||||||| ||||||||||||  ||||||| |||||||||| |    
T  4940 tcactctttcagtcttctacaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatcttctgatgaactagagcttctgg 4841  T
Q  231 tgatcttcagctt 243  Q
    |||||||||||||    
T  4840 tgatcttcagctt 4828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 9968 - 10219
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||| |||||||||   |||||||||  || |  ||||||||||||| || ||||||    
T  9968 agagacaaaaacagagtagtggaggtagtggttgtacactttgtacaattgtactttgtgaacgctcttcaaagagtaagcatccaatgctttcaaatcc 10067  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||  |||||||||| |||||||||||| |||| ||||||||| ||||||||||||||||||| ||||||| ||||||||||||| |    
T  10068 tttcaaaatagtcgttacttcactcttctagtcttctgcaaagcttagacgagattgaatccattgaatagcctttgaagctttaagtcttgcatctcct 10167  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  | ||||| ||||||||  ||||| ||||||||||||||||||||    
T  10168 gatgaacttcaacttcttgtgatctt--gcttctgatgaacttgcttctgatga 10219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 36887 - 36649
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||| |||||||||||||||||||||||||| |||| ||||  |||| |||||| || ||||||||||||||||||| ||||||    
T  36887 agagacaaaaacagagtagtagaggtagtggttgtacacttcgtacaattgttctttgtcaacactctttaaagaacaagcatccaatgccttcaaatcc 36788  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| ||||||||| |||||| ||| |||| |||||||||||| ||||||||||||| ||||||  ||||||| ||||||| ||||||||||||| |    
T  36787 tttcaaattagtcgttgcttcacttttctagtcatctgcaatgcttagacgagattaaattcattgagcagcctttgaagctttaagtcttgcatctctt 36688  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |  ||||||||||||||||| ||||| |||||    
T  36687 gatgaacttcagcttctagtgatcttctgcttctgatga 36649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 42118 - 42356
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||| |||||||||||||||||||||||||| |||| ||||  |||| |||||| || ||||||||||||||||||| ||||||    
T  42118 agagacaaaaacagagtagtagaggtagtggttgtacacttcgtacaattgttctttgtcaacactctttaaagaacaagcatccaatgccttcaaatcc 42217  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||| ||||||||| |||||| ||| |||| |||||||||||| ||||||||||||| ||||||  ||||||| ||||||| ||||||||||||| |    
T  42218 tttcaaattagtcgttgcttcacttttctagtcatctgcaatgcttagacgagattaaattcattgagcagcctttgaagctttaagtcttgcatctctt 42317  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |  ||||||||||||||||| ||||| |||||    
T  42318 gatgaacttcagcttctagtgatcttctgcttctgatga 42356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 1659 - 1884
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||  ||||||||||  || |  ||||||||||||| || ||||||    
T  1659 agagacaaaaacaaagtagtggaggtagtggttgtacacttcctacaattgtactttgtcaacgctcttcaaagagtaagcatccaatgctttcaaatcc 1758  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||||||||||||||||||| |||||||||||| |||| ||||||||| ||||||||||| | ||||| ||||||| ||||||||||||| |    
T  1759 tttcaaaatagtcgttgtttcactcttctagtcttctgcaaagcttagacgagattgaatccattgaacaacctttgaagctttaagtcttgcatctcct 1858  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    |||||| |  ||||||| ||||||||    
T  1859 gatgaacttcagcttctggtgatctt 1884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 119; Significance: 8e-61; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 12208 - 12446
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| || || |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||  || || ||||||||||||| || |||| |    
T  12208 agagacacaatctgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaataagcatccaatgctttcaaattc 12307  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||||||| |||||||  |||| |    
T  12308 tttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaattcattgaacagcctttgaagctttaagtcttgtgtctcct 12407  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| |||||||||| |||||| ||| |||| |||||    
T  12408 gatgaactagagcttctggtgatcctcaacttctgatga 12446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 119; Significance: 8e-61; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 12 - 206
Target Start/End: Original strand, 14647 - 14841
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||| | |||||||||  ||||||||||  ||  |||||||||||||||||| ||||||    
T  14647 agagacacaaactgagtagtggaggtagtggttgtacacttcgtaaaattgtactttgtcaacgctcttcaaagtacaagcatccaatgccttcaaatcc 14746  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcat 206  Q
    || ||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||||| ||||||||||    
T  14747 tttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcat 14841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 119; Significance: 8e-61; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 377671 - 377433
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||| ||||| |||||||||  ||| ||||||  || ||||||||||||||||||| ||||||    
T  377671 agagacacaaactgagtagtggagatagtggttgtacacttggtacaattgtactttgtcaatgctcttcaaagaacaagcatccaatgccttcaaatcc 377572  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||| |||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| || | | ||| ||| ||| ||||||||||||| |    
T  377571 tttcaatatagtcgttgcttcactcttccggtcttctgcaatgcttagacgagattaaatccattcaacaacatttgaagttttaagtcttgcatctcct 377472  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||| || | ||||| ||||||||||||||| |||||    
T  377471 gatgaactataacttctggtgatcttcagcttctgatga 377433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 20 - 250
Target Start/End: Original strand, 220245 - 220474
Alignment:
Q  20 aaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaa 119  Q
    ||||| ||||||||||||||||||| ||||||||||||| |||||||||  ||||||||||  || |||||||||||||||| || |||| | |   ||     
T  220245 aaactgagtagtggaggtagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaataacaagcatccaatgc-ttcaaattcatttgaat 220343  T
Q  120 tagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaat 219  Q
    ||| ||||| |||||||| |  |||||||||||||||| |||||||||||| ||| |||| ||||||| ||||||| |||||  |||||| ||||||| |    
T  220344 tagccgttgcttcactctcctggtcttctgcaatgcttagacgagattaaaaccaatgaacagcctttgaagctttaagtctctcatctcctgatgaact 220443  T
Q  220 agagcttctagtgatcttcagcttcagatga 250  Q
      ||||||| ||||||||||||||| |||||    
T  220444 tcagcttctggtgatcttcagcttctgatga 220474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 244382 - 244256
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    ||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||  || ||||||||||||||| ||| ||||||||   || |||| |    
T  244382 agtagtggaggtagtggttgtacacttcgtacaattgtcctttttcaacgctcttcaaagaacaagcatccaatgtcttcaaatccttttgaattagttg 244283  T
Q  126 ttgtttcactcttccagtcttctgcaa 152  Q
    ||| ||||||||||  |||||||||||    
T  244282 ttgcttcactcttctggtcttctgcaa 244256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 211397 - 211538
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||| |||||| ||||||||||   ||||| |  |||||||||||||| || ||||||| ||||| || ||||||    
T  211397 agagacaaaaacagagtagtggaggtagtagttgtatacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcattaaaatcc 211496  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaat 153  Q
    || |||||||||||||| |  ||| |||||||||||||||||    
T  211497 ttacaaaatagtcgttgctatacttttccagtcttctgcaat 211538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 474 - 712
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| || || |||| ||||| || ||||||||||||||||||| ||||||| |  ||||||||||  || ||||||||||||||||||| ||||||    
T  474 agagacacaacctgagtaatggagataatggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcc 573  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||| |||||| | ||||| | ||||| ||||||||||||| |    
T  574 tttcaaaatagtcgttgcttcactattccagtcttctgcaatgcttagacgagattaaatcaattgaacatcctttgacgctttaagtcttgcatctcct 673  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||  |  ||||||| ||||||||||||||| |||||    
T  674 gatgagctttagcttctggtgatcttcagcttctgatga 712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 26087 - 25849
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||| ||| ||||||||||||||||| |||| ||||||| |  |||| |||||  || ||||||||||||||||||| ||||||    
T  26087 agagacacaaactgagtagtcgagatagtggttgtacacttcatacaattgtactatgtcaaccctcttcaaagaacaagcatccaatgccttcaaatcc 25988  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||| |||||||||| |||||||||| ||||||||||||||||||||| | ||||| | ||||| ||||||||||||| |    
T  25987 tttcaaaatagtcgttgcttcacttttccagtcttttgcaatgcttagacgagattaaatccattgaacaacctttgacgctttaagtcttgcatctcct 25888  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatga 250  Q
    |||||  |  ||||||| ||||||||||||||| |||||    
T  25887 gatgagctttagcttctggtgatcttcagcttctgatga 25849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 44782 - 44652
Alignment:
Q  46 tacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtct 145  Q
    ||||||||||||| ||||| | |  ||||||||||  || |||||||||| |||||||| |||||||| |||||||| ||||| |||||| |||||||||    
T  44782 tacacttcgtacaattgtattatgtcaacgctcttcaaagaacaagcatctaatgccttcaaatcctttcaaaatagacgttgcttcacttttccagtct 44683  T
Q  146 tctgcaatgctttgacgagattaaatccatt 176  Q
    ||| |||| ||| ||||||||||||||||||    
T  44682 tctacaatacttagacgagattaaatccatt 44652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 12 - 244
Target Start/End: Complemental strand, 21083 - 20851
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||| ||||||||   | |||||||||||| || |||||||||||||||| ||||||    
T  21083 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaattgtacttggtcgacgctctttgaagaataagcatccaatgccttcaaatcc 20984  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||   ||||| |||||||||| ||||||||||||||||| |||||||||||||| |||||| | ||||| ||||||| ||||||||||||| |    
T  20983 tttcaaaatgaccgttgcttcactcttctagtcttctgcaatgcttagacgagattaaatcaattgaacaacctttgaagctttaagtcttgcatctctt 20884  T
Q  212 gatgaaatagagcttctagtgatcttcagcttc 244  Q
    |||||| |  | ||| | |||||||||||||||    
T  20883 gatgaacttcaacttttggtgatcttcagcttc 20851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 18 - 217
Target Start/End: Original strand, 103577 - 103776
Alignment:
Q  18 aaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaa 117  Q
    |||||| ||||||||||||||||||||| |||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||| | ||| || |||    
T  103577 aaaaacaaagtagtggaggtagtggttgcacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttaatatcatttcaa 103676  T
Q  118 aatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaa 217  Q
    ||||| ||||| ||||||||||||||||||||||||| || ||| | ||||||| |||| || | ||||||||||||| ||||||||||||| |||||||    
T  103677 aatagccgttgcttcactcttccagtcttctgcaatgtttagacaaaattaaattcatttaacaacctttcaagctttaagtcttgcatctcctgatgaa 103776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 60015 - 60240
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||  ||| |||||||||||||||||||||| ||||||| |  ||||||||||  || ||||||||||||||| ||| ||||||    
T  60015 agagacacaaactgagtagaagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatggcttcaaatcc 60114  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||| ||||||||||||||||| ||| ||||||||||||||||||||| | ||||| ||||||| ||||||||||||  |    
T  60115 tttcaaaatagtcgttgcttcacttttccagtcttctgcaattcttggacgagattaaatccattgaacatcctttgaagctttaagtcttgcatcttct 60214  T
Q  212 gatgaaatagagcttctagtgatctt 237  Q
    |||||| |  ||||||| ||||||||    
T  60215 gatgaactttagcttctggtgatctt 60240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 7925 - 8130
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| |||||  ||||||||| |||||||||||||||||||||| ||||||| |  ||||||||||  || |||||||||||||||  || ||||||    
T  7925 agagacacaaacttcgtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgaattcaaatcc 8024  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||| || ||||||||| |||||||| ||||||||||||||||||||| | ||||| ||||||| ||| ||||||||| |    
T  8025 tttcaaaatagtcgttgcttcacttttacagtcttctacaatgcttggacgagattaaatccattgaacaacctttgaagctttaagttttgcatctcct 8124  T
Q  212 gatgaa 217  Q
    ||||||    
T  8125 gatgaa 8130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 109; Significance: 7e-55; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 14 - 217
Target Start/End: Original strand, 212355 - 212559
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcctt 113  Q
    ||||||||||  ||||||||||||||||||||||||||||||||| |||||||||  ||||||||||  || |||||||||||||||| || ||||||||    
T  212355 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgctttcaaatcctt 212454  T
Q  114 ccaaaa-tagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatg 212  Q
      |||| |||| |||| |||||||||| ||||||||||||||||| ||||||||| ||||||| ||||||||||| ||||||| ||||||| ||||| ||    
T  212455 ttaaaaatagttgttgcttcactcttctagtcttctgcaatgcttagacgagattgaatccatagaatagcctttgaagctttaagtcttggatctcctg 212554  T
Q  213 atgaa 217  Q
    |||||    
T  212555 atgaa 212559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 72 - 249
Target Start/End: Complemental strand, 6250 - 6073
Alignment:
Q  72 aacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaat 171  Q
    |||||||||  || |||||||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||    
T  6250 aacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattgaat 6151  T
Q  172 ccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttctagtgatcttcagcttcagatg 249  Q
    | |||||| | ||||| ||||||| ||||||||||||| ||||||| || | ||||| | ||||||||||||| ||||    
T  6150 ctattgaacatcctttgaagctttaagtcttgcatctcctgatgaattacaacttctggagatcttcagcttctgatg 6073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 78478 - 78227
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||| |||||||||||||||||||||||||   |||||||  ||||||||||| || || |||||||||||||||| ||||||    
T  78478 agagacaaaaacatagtagtgtaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttaaagaataagcatccaatgccttcaaatcc 78379  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||| |||||||||||||||||  || |||||| || |||||  | |||||| ||| ||||||| ||   ||||||||||    
T  78378 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgataaatagcttttgaagctttaag--ctgcatctcat 78281  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || ||||||| |||||  |||| ||| ||||||||||||||||||||    
T  78280 gatgaactacagcttctggtgattctcagattctgatgaacttgcttctgatga 78227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 15124 - 15313
Alignment:
Q  20 aaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaa 119  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||  ||||||| ||  || ||||| |||||||||| || |||||||| |||||    
T  15124 aaactaagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctattcaaagaacaatcatccaatgctttcaaatcctttcaaaa 15223  T
Q  120 tagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctc 209  Q
    |||||| || ||||||||||  |||||||||||||||| ||||||||||||||||||||  ||||||| ||||||| |||||||||||||    
T  15224 tagtcgatgcttcactcttctggtcttctgcaatgcttagacgagattaaatccattgatcagcctttgaagctttaagtcttgcatctc 15313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 101; Significance: 4e-50; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 76 - 264
Target Start/End: Original strand, 39488 - 39676
Alignment:
Q  76 ctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccat 175  Q
    |||||| || |||| ||||| |||||||| |||||||| |||| |||| |||| |||||||||| |||||| || ||||| | |||||||||||||||||    
T  39488 ctctttaaagaacatgcatctaatgccttcaaatcctttcaaattagttgttgcttcactcttctagtcttttgtaatgcctagacgagattaaatccat 39587  T
Q  176 tgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatg 264  Q
    |||| ||||||| ||||||| | ||||||||||| ||||||| |||||||||| ||||||||||||||| |||||||||||||||||||    
T  39588 tgaacagcctttgaagctttaaatcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttctgatg 39676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 76 - 264
Target Start/End: Original strand, 137548 - 137736
Alignment:
Q  76 ctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccat 175  Q
    |||||| || |||| ||||| |||||||| |||||||| |||| |||| |||| |||||||||| |||||| || ||||| | |||||||||||||||||    
T  137548 ctctttaaagaacatgcatctaatgccttcaaatcctttcaaattagttgttgcttcactcttctagtcttttgtaatgcctagacgagattaaatccat 137647  T
Q  176 tgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatg 264  Q
    |||| ||||||| ||||||| | ||||||||||| ||||||| |||||||||| ||||||||||||||| |||||||||||||||||||    
T  137648 tgaacagcctttgaagctttaaatcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttctgatg 137736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 37401 - 37463
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaac 74  Q
    |||||||||||   ||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  37401 agagacaaaaatagagtagtggaggtagtggttgtacacttcgtacaattgtactttgccaac 37463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 135461 - 135523
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaac 74  Q
    |||||||||||   ||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  135461 agagacaaaaatagagtagtggaggtagtggttgtacacttcgtacaattgtactttgccaac 135523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 159054 - 159234
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| |||| ||||||| |||||||||||| |||||||| |||| |||| ||||  ||||||||||  || |||||||||  |||||||| |||| |    
T  159054 agagacacaaacaaagtagtagaggtagtggttttacacttcatacaattgtcctttgtcaacgctcttcaaagaacaagcatataatgccttcaaattc 159153  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagct 193  Q
     |   || ||| ||||| ||||||||||   |||| ||||||| || |||| |||||||||| ||||| | ||||| |||||    
T  159154 atttgaattagccgttgcttcactcttctgatcttttgcaatg-ttagacgtgattaaatcctttgaacatcctttgaagct 159234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 6852 - 6601
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    |||||||||||   |||| ||||||||||||||||||||||||||||   |||||||  ||| |||||||||| ||||||||||||||||||| |||||     
T  6852 agagacaaaaatagagtactggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctctttgaagaacaagcatccaatgccttcaaatct 6753  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||||| || |||||| ||||||||||||||||| ||| ||| || || ||||| || || ||| ||| ||||||| ||  ||||||||| |    
T  6752 tttcaaaatagtcggtgcttcacttttccagtcttctgcaatccttagacaagtttgaatccgttaaacagcttttgaagctttaag--ttgcatctcct 6655  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || ||||||| |||||  |||||||| ||| ||||||||||||||||    
T  6654 gatgaactacagcttctggtgattctcagcttctgataaacttgcttctgatga 6601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 99; Significance: 7e-49; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 215609 - 215358
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    |||||| |||||  |||||||||||||||||||||||||||||||||   |||||||  |||||||||||||| ||||||||||||||||||| ||||||    
T  215609 agagacgaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 215510  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||| ||||| |||||| ||| |||||||||||||  || |||||| || |||||||| || ||| ||| ||| ||| ||  ||||||||| |    
T  215509 tttcaaaatagccgttgcttcacttttctagtcttctgcaatctttagacgagtttgaatccattaaacagcttttgaagttttaag--ttgcatctcct 215412  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||| || |  ||||||| ||||| ||| ||||| ||| ||||||||||||||||    
T  215411 gataaactgcagcttctggtgattttcggcttctgataaacttgcttctgatga 215358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 140983 - 141021
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  140983 agacaaaaacagagtagtggaggtagtggttgtacactt 141021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 5802 - 5597
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||| ||||||||||||||||| |||||||||  ||||||||||  || ||||||||||||||||||| | ||||    
T  5802 agagacacaaactgagtagtggagatagtagttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaacaagcatccaatgccttcatatcc 5703  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || ||||||||  |||| | |||||||||| |||||| |||| ||| ||||||||||||||||||||| | ||||| ||||| | ||||||||||||| |    
T  5702 tttcaaaatagatgttgctccactcttccaatcttctacaatacttggacgagattaaatccattgaacaacctttgaagctctaagtcttgcatctcct 5603  T
Q  212 gatgaa 217  Q
    ||||||    
T  5602 gatgaa 5597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 3303 - 3554
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  || |||||||||||||||||||||||| |||||   ||||| |  |||||||||||||| || || ||||||||||||| ||||||    
T  3303 agagacaaaaacagagcagtggaggtagtggttgtacactttgtacaaacgtactatatcaacgctctttgaagaataaacatccaatgccttcaaatcc 3402  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    ||||||||||| |||||||  ||| ||||| |||||||||||  || |||||| || ||||| || || ||| ||| ||||||| ||  ||||||||| |    
T  3403 ttccaaaatagccgttgttatacttttccaatcttctgcaatctttagacgagtttgaatccgttaaacagcttttgaagctttaag--ttgcatctcct 3500  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| || ||||||| ||||| ||||||||| ||| ||||||||||||||||    
T  3501 gatgaactatagcttctggtgattttcagcttctgataaacttgcttctgatga 3554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 237
Target Start/End: Complemental strand, 19585 - 19359
Alignment:
Q  11 aagagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatc 110  Q
    |||||||| ||||| ||||||| |  |||||||||||||||||||||| ||||| | |  ||||||||||  || |||||||||||||||| ||||||||    
T  19585 aagagacacaaactgagtagtgaatatagtggttgtacacttcgtacaattgtattatgtcaacgctcttcaaagaacaagcatccaatgcttttaaatc 19486  T
Q  111 cttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctca 210  Q
    ||| ||||||||| |||| |||||||||| ||||||||||||| ||| | ||| ||||||||||||||| | | ||| ||||||| |||||||||||||     
T  19485 ctttcaaaatagttgttgcttcactcttctagtcttctgcaattcttaggcgaaattaaatccattgaacaacttttgaagctttaagtcttgcatctcc 19386  T
Q  211 tgatgaaatagagcttctagtgatctt 237  Q
    | ||||| || | ||||| ||||||||    
T  19385 tcatgaactacaacttctggtgatctt 19359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 99317 - 99069
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||   ||||| |  || ||||  ||||| || ||||||||||||||||  |||||    
T  99317 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcagcgct--ttgaagaataagcatccaatgccttgtaatcc 99220  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgcttt-gacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctca 210  Q
    ||||||||||||||||| |  ||| |||| ||| |||||||  |||| |||||| || ||||| || || ||| ||| ||||||| ||  |||||  ||     
T  99219 ttccaaaatagtcgttgctatacttttccggtcatctgcaa--ctttagacgagtttgaatccgttaaacagcttttgaagctttaag--ttgcacttcc 99124  T
Q  211 tgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||| || | ||||| ||||||||||||||| ||| ||||||||||||||||    
T  99123 tgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatga 99069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 72 - 249
Target Start/End: Original strand, 30283 - 30460
Alignment:
Q  72 aacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaat 171  Q
    |||||||||  || |||||||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||    
T  30283 aacgctcttcaaagaacaagcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattgaat 30382  T
Q  172 ccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttctagtgatcttcagcttcagatg 249  Q
    | |||||| | ||||| ||||||| ||||||||||||| ||||||| || | ||||| | ||||||||||||| ||||    
T  30383 ctattgaacatcctttgaagctttaagtcttgcatctcctgatgaattacaacttctggagatcttcagcttctgatg 30460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 12 - 195
Target Start/End: Original strand, 9902 - 10084
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||  ||||||||||||||||||| ||||||||||||| |||||||||  ||||||||||  || |||||||||| |||||||| |||| |    
T  9902 agagacacaaacatagtagtggaggtagtggttttacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgccttcaaattc 10001  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagcttt 195  Q
     |   || ||||||||||| ||||||||   ||||||||||||| | |||| |||||||||| | ||| ||||||| |||||||    
T  10002 atttgaattagtcgttgttgcactcttctgatcttctgcaatgc-tagacgtgattaaatccttagaacagcctttgaagcttt 10084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 767 - 604
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  ||||||||||||||||||||||||||| |||||   |||||||  |||||||||||||| ||||||||||||||||||| ||||||    
T  767 agagacaaaaacagagtagtggaggtagtggttgtacacttagtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcc 668  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccat 175  Q
    || |||||||||||||| |||||| |||||||||||||||||  || |||||| || |||||||    
T  667 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccat 604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 1865 - 1778
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||   ||| | |  |||||||||||||| || |||||||||||||    
T  1865 agacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtaatatgtcaacgctctttgaagaataagcatccaatgc 1778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 179
Target Start/End: Original strand, 13570 - 13737
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||| ||||| |||||||||| |||||||||||||||| ||||| ||||||| |  ||||||||||  || ||||| ||||||||||||| ||||||    
T  13570 agagacacaaactgagtagtggagatagtggttgtacactttgtacaattgtactatgtcaacgctcttcaaagaacaaacatccaatgccttcaaatcc 13669  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaa 179  Q
    || ||||||||| |||| |||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  13670 tttcaaaatagttgttgcttcactattccaatcttctgcaatgcttagacgagattaaatccattgaa 13737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 264
Target Start/End: Original strand, 9156 - 9403
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcctt 113  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| || ||||||||||||||||  |||||||    
T  9156 agacaaaaacacagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttctaatcctt 9255  T
Q  114 ccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatga 213  Q
    ||||||||||||||| |  ||| ||||| ||||||||||| |||||| ||| || ||||| || || ||| ||| ||||||| ||  ||||||||| |||    
T  9256 ccaaaatagtcgttgctatacttttccaatcttctgcaat-ctttgatgagtttgaatccgttaaacagcttttgaagctttaag--ttgcatctcctga 9352  T
Q  214 tgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatg 264  Q
    |||| || | ||||| |||||  |||||||| ||| |||||||||||||||    
T  9353 tgaactacaacttctggtgattctcagcttctgataaacttgcttctgatg 9403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 265
Target Start/End: Original strand, 60799 - 61053
Alignment:
Q  9 agaagagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaa 108  Q
    |||||||||||||||  |||||||||| ||||||||||||||||||||||   ||||| |  |||||||||||||| ||||||||| |||||||||  ||    
T  60799 agaagagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaacaagcattcaatgccttccaa 60898  T
Q  109 tccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatct 208  Q
    |||||||||||||| ||||| |  ||| |||||||||||||||||  || |||||| |||||||| || || | | ||| ||| ||| ||  ||||||||    
T  60899 tccttccaaaatagccgttgctatacttttccagtcttctgcaatttttagacgagtttaaatcctttaaacaacttttgaagttttaag--ttgcatct 60996  T
Q  209 catgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    | ||||||| || | ||||| |||||  ||| |||| ||| ||||||||||||||||    
T  60997 cctgatgaactacaacttctggtgattctcaacttctgataaacttgcttctgatga 61053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 824 - 673
Alignment:
Q  86 aacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcct 185  Q
    ||||||||||||||||||| |||||||| ||||||||||  || |||||| ||||||||||||||||||||| ||||||||||||| ||||||| || ||    
T  824 aacaagcatccaatgccttcaaatcctttcaaaatagtcagtgcttcactattccagtcttctgcaatgcttagacgagattaaattcattgaacagtct 725  T
Q  186 ttcaagctttgagtcttgcatctcatgatgaaatagagcttctagtgatctt 237  Q
    || ||| ||| ||||||||||||| ||||||| |  ||||||| ||||||||    
T  724 ttgaagttttaagtcttgcatctcctgatgaactttagcttctggtgatctt 673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 12 - 217
Target Start/End: Complemental strand, 1811 - 1608
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  || |||| ||||||||||||||||||||||| |   |||||||  |||||||||||||| ||||| |||||| |||||| ||||||    
T  1811 agagacaaaaacagagcagtgaaggtagtggttgtacacttcgtaaaaacgtactttgtcaacgctctttgaagaacaatcatccagtgccttcaaatcc 1712  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
    || |||||||||||||| |||||| ||| |||||||||||||  ||  ||||| || |||||||| || ||| ||| ||||||||||  ||||||||| |    
T  1711 tttcaaaatagtcgttgcttcacttttcaagtcttctgcaatatttaaacgagtttgaatccattaaacagcttttgaagctttgag--ttgcatctcct 1614  T
Q  212 gatgaa 217  Q
    ||||||    
T  1613 gatgaa 1608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 515 - 472
Alignment:
Q  222 agcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||| ||||| ||||||||| ||||||||||||||||||||    
T  515 agcttctggtgattttcagcttctgatgaacttgcttctgatga 472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 12 - 176
Target Start/End: Complemental strand, 5714 - 5550
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||||||||||||||||||||| || |  ||||||||  |||||||||||||| || ||||||| |||||||| ||||||    
T  5714 agagacaaaaacatagtagtggaggtagtggttgtacacttcatataaatgtactttgtcaacgctctttgaagaataagcatcaaatgccttcaaatcc 5615  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccatt 176  Q
    || ||||||||| |||| || ||| |||||||||||||||||  || |||||| || ||||||||    
T  5614 tttcaaaatagttgttgctttacttttccagtcttctgcaatctttagacgagtttgaatccatt 5550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 26 - 265
Target Start/End: Original strand, 6020 - 6256
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||| |||||||||||||||||||| ||||| |||||||||  ||||||||||  || ||||||||||||||||||| ||||||||   || |||| |    
T  6020 agtagtagaggtagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatccttttgaattagttg 6119  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| |||  |||||  |||||||||||||| | | || |||||||||| ||||| || |||| ||||||| | |||  |||||  ||||||| |  | ||    
T  6120 ttgcttcggtcttctggtcttctgcaatgc-taggcgtgattaaatcctttgaacagtctttgaagctttaaatctctcatcttctgatgaacttcaact 6218  T
Q  226 tctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||||| ||  ||||| ||||||||||||||||||||    
T  6219 tctagtgatatt--gcttctgatgaacttgcttctgatga 6256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 269
Target Start/End: Original strand, 15792 - 16048
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacactt-gtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatc 110  Q
    ||||||| ||||| |||||| ||| | |||||||||||||||||||| || ||||| |  ||||||||||  || ||||||||||||||||||| || ||    
T  15792 agagacacaaactgagtagtagagatggtggttgtacacttcgtacaatttgtactatgtcaacgctcttcaaagaacaagcatccaatgccttcaagtc 15891  T
Q  111 cttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaa-tagcctttcaagctttgagtcttgcatctc 209  Q
    ||| ||||||| | | || ||||||| ||  ||||| |||||| ||| ||||||||| |||||||||||  | | ||| ||||||| |||||||||||||    
T  15892 ctttcaaaataattggtgcttcactcctctggtcttttgcaattcttggacgagattgaatccattgaacaatcttttgaagctttaagtcttgcatctc 15991  T
Q  210 atgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatgatgtc 269  Q
     ||||||| |  |||||||  |||  |   | ||| ||||||||||||||||||||||||    
T  15992 ctgatgaactttagcttctgatgagat---ggttctgatgaacttgcttctgatgatgtc 16048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 64; Significance: 5e-28; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 71 - 265
Target Start/End: Complemental strand, 65481 - 65290
Alignment:
Q  71 caacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaa 170  Q
    |||||||||||||| || |||||||||||||| || ||||||| |||||||||||||  |  ||| ||||||||||||||||| ||| |||||| || ||    
T  65481 caacgctctttgaagaataagcatccaatgccctttaatcctttcaaaatagtcgtttctatacttttccagtcttctgcaat-cttagacgagtttgaa 65383  T
Q  171 tccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||| |  |||||| ||| ||||||| ||  ||||||||| ||||||| |  ||||||| |||||   ||||||| ||||||||||||||||||||    
T  65382 tccttgaaatagcttttgaagctttaag--ttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctgatga 65290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 71 - 265
Target Start/End: Complemental strand, 144526 - 144335
Alignment:
Q  71 caacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaa 170  Q
    |||||||||||||| || |||||||||||||| || ||||||| ||||| |||||||| |  ||| ||||||||||||||||| ||| |||||| || ||    
T  144526 caacgctctttgaagaataagcatccaatgccctttaatcctttcaaaacagtcgttgctatacttttccagtcttctgcaat-cttagacgagtttgaa 144428  T
Q  171 tccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||| |  |||||| ||| ||||||| ||  ||||||||| ||||||| |  ||||||| |||||   ||||||| ||||||||||||||||||||    
T  144427 tccttgaaatagcttttgaagctttaag--ttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctgatga 144335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 128
Target Start/End: Complemental strand, 165044 - 164942
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||||||||||| ||||||||||||||   |||||||  ||||||||||||||  | |||||||||||||||| |||||||| |||| |||| |    
T  165044 agtagtggaggtagtggtcgtacacttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctttcaaattagttg 164945  T
Q  126 ttg 128  Q
    |||    
T  164944 ttg 164942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 263
Target Start/End: Complemental strand, 7254 - 7019
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||| ||||||||||||||||||||||   ||||  |  ||||| | |||||| || ||||||||||||| ||  |||||||||||||||||||    
T  7254 agtagtggagatagtggttgtacacttcgtacaaacgtaccatgtcaacgttgtttgaagaataagcatccaatgctttccaatccttccaaaatagtcg 7155  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagct 225  Q
    ||| |  ||| |||||||||||||||||  |  |||| | || ||||| |  || ||| ||| ||||||| ||  ||||||||| ||||||| || ||||    
T  7154 ttgctatacttttccagtcttctgcaatcttcagacgggtttgaatccttcaaacagcttttgaagctttaag--ttgcatctcctgatgaactacagct 7057  T
Q  226 tctagtgatcttcagcttcagatgaacttgcttctgat 263  Q
    ||| |||||   ||||||| ||||||||||||||||||    
T  7056 tctggtgattcacagcttctgatgaacttgcttctgat 7019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 244
Target Start/End: Complemental strand, 4987 - 4873
Alignment:
Q  130 ttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttcta 229  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||| | ||||| ||||||| ||||||||||||| ||||||| || | ||| |     
T  4987 ttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcttgatgaattaaaacttttg 4888  T
Q  230 gtgatcttcagcttc 244  Q
    ||||||| |||||||    
T  4887 gtgatctccagcttc 4873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 9958 - 10144
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttc 114  Q
    |||| ||||| ||||||||||||||||||||||||||| ||||| |||||||||  ||||||||||  || |||||||||| |||||||| |||| | |     
T  9958 gacacaaactgagtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatcgaatgccttcaaattcatt 10057  T
Q  115 caaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcc-tttcaagctttgagtct 201  Q
      || ||| ||||| |||||||||   |||||||||||||| | | || |||||||||||||||| |||| ||| ||||||| |||||    
T  10058 tgaattagccgttgcttcactcttatggtcttctgcaatgc-taggcgtgattaaatccattgaacagccatttgaagctttaagtct 10144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 1620 - 1491
Alignment:
Q  25 aagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtc 124  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||||||||| ||||  || || || | ||||||||||| ||||||||   ||||||||    
T  1620 aagtagtggagatagtggttgtacacttcgtacaattgtccttttccaacgttcttcaaagaataaacgtccaatgccttcaaatccttttgaaatagtc 1521  T
Q  125 gttgtttcactcttccagtcttctgcaatg 154  Q
    |||| ||||||| |  ||||||||||||||    
T  1520 gttgcttcactcctatagtcttctgcaatg 1491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 5633 - 5767
Alignment:
Q  19 aaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaa 118  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||| |||   || || |||||||||||||||| |||| | |   ||    
T  5633 aaaactgagtagtggaggtagtggttgtacacttcgtacaattgta-ttttccaacgttctccaaagaataagcatccaatgccttcaaattcatttgaa 5731  T
Q  119 atagtcgttgtttcactcttccagtcttctgcaatg 154  Q
    |||||||||| |||| ||||| ||||||||| ||||    
T  5732 atagtcgttgcttcattcttctagtcttctggaatg 5767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 237
Target Start/End: Original strand, 9825 - 10019
Alignment:
Q  43 ttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccag 142  Q
    |||||||||| ||||| ||||||| |  ||||||||||  ||  ||||||||||||||| || || ||||| |||||||||||||  |||||||||   |    
T  9825 ttgtacactttgtacaattgtactatgtcaacgctcttcaaagcacaagcatccaatgctttcaagtcctttcaaaatagtcgttacttcactcttttgg 9924  T
Q  143 tcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttctagtgatctt 237  Q
    ||||||  ||||||| |||||||||||||||||| || |  | || ||||||| | |||||||||||  |||||| |  ||||||| ||||||||    
T  9925 tcttctataatgcttagacgagattaaatccattaaacaaaccttgaagctttaaatcttgcatctccagatgaacttcagcttctggtgatctt 10019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 36294 - 36115
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcctt 113  Q
    |||||||||  | ||||||||| |||||||||||||||||||||| |||| | ||| |||| ||||   |  || |||||||||||||||||||| || |    
T  36294 agacaaaaatcaggtagtggagatagtggttgtacacttcgtacaattgtccattttcaactctctccaacgaaaaagcatccaatgcctttaaaaccat 36195  T
Q  114 ccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctt 194  Q
       ||||||| |||| |||| ||||||||||||||||||||  | |||| ||||||||| |||||| | ||||| ||||||    
T  36194 ttgaaatagttgttgcttcattcttccagtcttctgcaatg-atagacgtgattaaatcaattgaacaacctttgaagctt 36115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 25777 - 25688
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||   ||||| |  ||||||| |||||| || |||||||||||||    
T  25777 agagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctttttgaagaataagcatccaatgc 25688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 34916 - 34827
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||||||||  |||||||||||||||||||||||||||| ||||   ||||| |  |||||||||||||| || |||||||||||||    
T  34916 agagacaaaaacagagtagtggaggtagtggttgtacacttcatacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 34827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 2842 - 2702
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||   ||||| |  |||| ||||||||| || | |||||||||| ||||  | ||    
T  2842 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaatacgcatccaatg-ctttccaacc 2744  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaat 153  Q
    |||||||||||||||||    ||| |||||||||||||||||    
T  2743 ttccaaaatagtcgttgcaatacttttccagtcttctgcaat 2702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 262
Target Start/End: Complemental strand, 5922 - 5801
Alignment:
Q  142 gtcttctgcaatgctttgacgagattaaatccattgaatagcctttc-aagctttgagtcttgcatctcatgatgaaatagagcttctagtgatcttcag 240  Q
    ||||||||||||||||  ||||||| |||||||||||| | |||||  ||||||| ||||||||||||| | ||||| |  ||||||| |||||||| ||    
T  5922 gtcttctgcaatgcttaaacgagatgaaatccattgaacatccttttgaagctttaagtcttgcatctcctaatgaacttcagcttctggtgatctttag 5823  T
Q  241 cttcagatgaacttgcttctga 262  Q
    |||| ||||||||| |||||||    
T  5822 cttctgatgaacttacttctga 5801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 25511 - 25395
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||   ||||| |  |||| ||||||||| || ||  |||||||||| || |||||    
T  25511 agagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataactatccaatgcccttcaatcc 25412  T
Q  112 ttccaaaatagtcgttg 128  Q
    || ||||||||||||||    
T  25411 tttcaaaatagtcgttg 25395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 265
Target Start/End: Complemental strand, 23549 - 23424
Alignment:
Q  137 ttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcatgatgaaatagagcttctagtgatct 236  Q
    ||||||||||||||||| ||| |||||| || ||||| |  || ||| ||| ||||||| |||  |||||||| ||||||| |  ||||||| |||||      
T  23549 ttccagtcttctgcaat-cttagacgagtttgaatccttgaaacagcttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattc 23453  T
Q  237 tcagcttcagatgaacttgcttctgatga 265  Q
     ||||||| ||||||||||||| ||||||    
T  23452 acagcttctgatgaacttgcttttgatga 23424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 15851 - 15811
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||||  |||||||||| ||||||||||||||||    
T  15851 agagacaaaaacagagtagtggagatagtggttgtacactt 15811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 118
Target Start/End: Complemental strand, 1907 - 1803
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcctt 113  Q
    ||||| |||| ||||||||||||||||||| |||||||||||| |   |||||||  ||||||||||||||  | |||||||||||||||| ||||||||    
T  1907 agacataaacaaagtagtggaggtagtggtcgtacacttcgtatagacgtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctt 1808  T
Q  114 ccaaa 118  Q
     ||||    
T  1807 tcaaa 1803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1747 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 1330 - 1408
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctt 104  Q
    |||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||  ||||| ||||||| ||||||||    
T  1330 agtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgcctt 1408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1745 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 81 - 3
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctt 104  Q
    |||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||  ||||| ||||||| ||||||||    
T  81 agtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgcctt 3  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 128
Target Start/End: Complemental strand, 15720 - 15618
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||| ||||||| ||||||||||||||   |||||||  ||| ||||||||||| | |||||||||||||||| |||||||| |||| ||| ||    
T  15720 agtagtggagatagtggtcgtacacttcgtacagacgtactttgtcaatgctctttgaaagataagcatccaatgccttcaaatcctttcaaactagccg 15621  T
Q  126 ttg 128  Q
    |||    
T  15620 ttg 15618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 38183 - 38085
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtc 124  Q
    |||||||||||||||||| |||||||||||||    |||||||  ||||||||||||||  | |||||||||||||||| |||||||| |||| |||||    
T  38183 agtagtggaggtagtggtcgtacacttcgtacggacgtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctttcaaattagtc 38085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 17877 - 17636
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcc 111  Q
    ||||||||||||  |||||||||| ||||||||||||||||| ||||   ||||| |  ||||||||||||||  | |||||||||||||||||          
T  17877 agagacaaaaacagagtagtggagatagtggttgtacacttcatacaaacgtactatgtcaacgctctttgaaggataagcatccaatgccttt------ 17784  T
Q  112 ttccaaaatagtcgttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcat 211  Q
       |||||||| ||||| |  ||| ||  ||||||||||||| ||| |||||| || ||||| |  || ||| ||| ||||||| ||  ||| ||||| |    
T  17783 ---caaaatagacgttgctatacttttgtagtcttctgcaat-cttagacgagtttgaatccttgaaacagcttttgaagctttaag--ttgtatctcct 17690  T
Q  212 gatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    |||||| |  ||||||| |||||   ||||||| ||||||||||||||||||||    
T  17689 gatgaattgaagcttctggtgattcacagcttctgatgaacttgcttctgatga 17636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 156
Target Start/End: Original strand, 40650 - 40780
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    ||||||| |||||||||||||||||||| |||| |||| ||||| ||||||||||  || ||| | ||||  ||||||| |||| |||   || ||| ||    
T  40650 agtagtgaaggtagtggttgtacacttcttacaattgttctttttcaacgctcttcaaagaaccaccatcatatgccttcaaattcttttgaattagccg 40749  T
Q  126 ttgtttcactcttccagtcttctgcaatgct 156  Q
    ||| ||||||||||  |||||||||||||||    
T  40750 ttgcttcactcttctggtcttctgcaatgct 40780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 44 - 153
Target Start/End: Original strand, 7963 - 8072
Alignment:
Q  44 tgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcgttgtttcactcttccagt 143  Q
    |||||||||||||||   ||||| |  |||||||||||||| || ||||||| |||||  || ||||||| |||||||||||||| |  ||| |||||||    
T  7963 tgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcgaatgcaattcaatcctttcaaaatagtcgttgctatacttttccagt 8062  T
Q  144 cttctgcaat 153  Q
    ||||||||||    
T  8063 cttctgcaat 8072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 201
Target Start/End: Complemental strand, 44017 - 43843
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatccttccaaaatagtcg 125  Q
    |||||||||| ||||||||||||| ||||||||  ||| ||||| ||||||||||  |  |||| |||||||||||||| ||||| ||   || ||| |     
T  44017 agtagtggagatagtggttgtacaattcgtacaaatgtcctttttcaacgctcttcaaggaacaggcatccaatgccttcaaatctttttgaattagcct 43918  T
Q  126 ttgtttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtct 201  Q
    ||| ||||||||||   |||||||||||| || | || |||||||||  ||||| ||||||| ||| ||| |||||    
T  43917 ttgcttcactcttctgatcttctgcaatg-ttaggcgtgattaaatcttttgaacagcctttgaagttttaagtct 43843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 7383 - 7469
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    |||||||||  ||||||||| |||||||||||||||||||||||  |||||| |  |||||||||||||  ||  ||||||||||||    
T  7383 gacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaatgtactatgtcaacgctctttgatgaattagcatccaatgc 7469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 2090 - 2039
Alignment:
Q  29 agtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctt 80  Q
    ||||||| |||||||||||||||||||||| |||||||||  ||||||||||    
T  2090 agtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctt 2039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 3990 - 3937
Alignment:
Q  29 agtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttg 82  Q
    ||||||||||||||| ||||||||||||||  ||||||||  ||||||||||||    
T  3990 agtggaggtagtggtcgtacacttcgtacagatgtactttgtcaacgctctttg 3937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 919 - 846
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaat 99  Q
    ||||||||| |||||||||||||||||||||||   ||| | |  |||||||||||||| || |||||||||||    
T  919 agtagtggaagtagtggttgtacacttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaat 846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 87712 - 87623
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||| ||||  ||||||||| |||||||||||||||||||||||   ||||| |  |||||||||||||| ||   |||||||||||    
T  87712 agagacagaaacagagtagtggaagtagtggttgtacacttcgtacagacgtactatgtcaacgctctttgaagaatttgcatccaatgc 87623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 74588 - 74681
Alignment:
Q  20 aaactaagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgcctttaaatcctt 113  Q
    |||| ||||||| ||||||||||||||||||||| |||| |||||||||  ||| ||| ||  || | |||||||| ||| |||| ||||||||    
T  74588 aaacaaagtagtagaggtagtggttgtacacttcatacaattgtactttgtcaatgcttttcaaagagcaagcatctaattccttcaaatcctt 74681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 35403 - 35467
Alignment:
Q  201 ttgcatctcatgatgaaatagagcttctagtgatcttcagcttcagatgaacttgcttctgatga 265  Q
    ||||||||  ||||||| |  ||||||||||||| | ||||||| ||||||||||||||||||||    
T  35403 ttgcatcttctgatgaattgtagcttctagtgatatacagcttctgatgaacttgcttctgatga 35467  T

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Target: scaffold1321 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1321
Description:

Target: scaffold1321; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 57
Target Start/End: Complemental strand, 1033 - 1002
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtac 57  Q
    ||||||||||||||||||||||||||||||||    
T  1033 agtagtggaggtagtggttgtacacttcgtac 1002  T

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Target: scaffold1263 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1263
Description:

Target: scaffold1263; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 57
Target Start/End: Complemental strand, 1226 - 1195
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtac 57  Q
    ||||||||||||||||||||||||||||||||    
T  1226 agtagtggaggtagtggttgtacacttcgtac 1195  T

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Target: scaffold0177 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 20487 - 20444
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacacttcgtac 57  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||    
T  20487 agacaaaaacagagtagtggaggtagtggttgtacactttgtac 20444  T

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Target: scaffold0078 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 31882 - 31808
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaaaaacaagcatccaatgc 101  Q
    ||||||||||||||||||||||||||| ||||  |||| ||||||||||| |||   || || |||||||||||||    
T  31882 agtagtggaggtagtggttgtacactt-gtactattgtccttttccaacgttctccaaagaataagcatccaatgc 31808  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 57
Target Start/End: Complemental strand, 6620 - 6589
Alignment:
Q  26 agtagtggaggtagtggttgtacacttcgtac 57  Q
    ||||||||||||||||||||||||||||||||    
T  6620 agtagtggaggtagtggttgtacacttcgtac 6589  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 47
Target Start/End: Original strand, 84394 - 84429
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgta 47  Q
    ||||||||||||| ||||||||||||||||||||||    
T  84394 agagacaaaaactgagtagtggaggtagtggttgta 84429  T

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Target: scaffold1477 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1477
Description:

Target: scaffold1477; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 1739 - 1701
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  1739 agacaaaaacagagtagtggaggtagtggttgtacactt 1701  T

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Target: scaffold0481 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 12903 - 12865
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  12903 agacaaaaacagagtagtggaggtagtggttgtacactt 12865  T

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Target: scaffold0473 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 2803 - 2757
Alignment:
Q  12 agagacaaaaactaagtagtggaggtagtggttgtacacttcgtaca 58  Q
    ||||||||||||  |||||||||| ||||||||||||||||| ||||    
T  2803 agagacaaaaacagagtagtggagttagtggttgtacacttcataca 2757  T

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Target: scaffold0410 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 15907 - 15945
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  15907 agacaaaaacagagtagtggaggtagtggttgtacactt 15945  T

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Target: scaffold0407 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 12194 - 12156
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  12194 agacaaaaacagagtagtggaggtagtggttgtacactt 12156  T

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Target: scaffold0201 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 7408 - 7446
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  7408 agacaaaaacagagtagtggaggtagtggttgtacactt 7446  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 35715 - 35753
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  35715 agacaaaaacagagtagtggaggtagtggttgtacactt 35753  T

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Target: scaffold0142 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 40680 - 40718
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  40680 agacaaaaacagagtagtggaggtagtggttgtacactt 40718  T

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Target: scaffold0102 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 52181 - 52143
Alignment:
Q  14 agacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  52181 agacaaaaacagagtagtggaggtagtggttgtacactt 52143  T

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Target: scaffold0627 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 8140 - 8103
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  8140 gacaaaaacagagtagtggaggtagtggttgtacactt 8103  T

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Target: scaffold0322 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 6963 - 6926
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  6963 gacaaaaacagagtagtggaggtagtggttgtacactt 6926  T

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Target: scaffold0272 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 13685 - 13648
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  13685 gacaaaaacatagtagtggaggtagtggttgtacactt 13648  T

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Target: scaffold0269 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 7301 - 7354
Alignment:
Q  29 agtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttg 82  Q
    ||||||||||||||| ||||||||||||||  ||||||||  |||| |||||||    
T  7301 agtggaggtagtggtcgtacacttcgtacatatgtactttgtcaacactctttg 7354  T

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Target: scaffold0267 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 6296 - 6259
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  6296 gacaaaaacagagtagtggaggtagtggttgtacactt 6259  T

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Target: scaffold0216 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 118 - 155
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  118 gacaaaaacagagtagtggaggtagtggttgtacactt 155  T

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Target: scaffold0072 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 36812 - 36775
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  36812 gacaaaaacagagtagtggaggtagtggttgtacactt 36775  T

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Target: scaffold0068 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 7832 - 7795
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  7832 gacaaaaacagagtagtggaggtagtggttgtacactt 7795  T

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Target: scaffold0068; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 10679 - 10642
Alignment:
Q  15 gacaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    |||||||||  |||||||||||||||||||||||||||    
T  10679 gacaaaaacagagtagtggaggtagtggttgtacactt 10642  T

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Target: scaffold0099 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 19430 - 19466
Alignment:
Q  16 acaaaaactaagtagtggaggtagtggttgtacactt 52  Q
    ||||||||  |||||||||||||||||||||||||||    
T  19430 acaaaaacagagtagtggaggtagtggttgtacactt 19466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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