View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0171_low_10 (Length: 286)
Name: NF0171_low_10
Description: NF0171
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0171_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 30 - 278
Target Start/End: Original strand, 35220801 - 35221054
Alignment:
| Q |
30 |
acttcctctatttttgggggttatgattgaaaatgactagctaaatattgatgtattcactgtactgtgccatttgcagaaggcacattcaggttcacta |
129 |
Q |
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| T |
35220801 |
acttcctctatttttgggggttatgattgaaaatgactagctaaatattgatgtattcactgtactgtgccatttgcagaaggcacattcaggttcacta |
35220900 |
T |
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| Q |
130 |
atattttgtaatgt-----tatgaaaagttatgatgcatgttatttattctaaatccgaagggaagattccaattgtttgttgcaacttgcatttcatac |
224 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35220901 |
atattttgtaatgttatgttatgaaaagttatgatgcatgttatttattctaaatccgaagggaagattccaattgtttgttgcaacttgcatttcatac |
35221000 |
T |
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| Q |
225 |
atatgcttaatgatcctatatttccctctcaagttgccacgtactgttcatctc |
278 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35221001 |
atatgcttaatgatcctatatttccctctcaagttgccacgtactgttcatctc |
35221054 |
T |
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