View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0172-INSERTION8 (Length: 280)
Name: NF0172-INSERTION8
Description: NF0172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0172-INSERTION8 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 8 - 280
Target Start/End: Complemental strand, 45127917 - 45127648
Alignment:
| Q |
8 |
aaatatatattaattaaataacttgtttgaattgtcgagaaatcactgtcaaaattttggctccattttataagagtccagagagccttcagtggagtca |
107 |
Q |
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| T |
45127917 |
aaatatatattaattaaataacttgtttgaattgttgagaaatcactgtcaaaattttggctccattttataagagtccagagagccttcagtggagtca |
45127818 |
T |
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| Q |
108 |
ctagggatcactgactactctttcccccaaagtggaaagatcctttcccattgggctttagtctttgtcaattgggctctgtgcagaactgtagatttta |
207 |
Q |
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| T |
45127817 |
ct----------gactactctttcccccaaagtgtaaagatcctttcccattgggctttagtctttgtcaattgggctctgtgcagaactgtagatttta |
45127728 |
T |
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| Q |
208 |
ttctttgtttgaactttattatgtctgtattcacaaca-------acagtataacgaaagcatctattcagtaatatcta |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
45127727 |
ttctttgtttgaactttattatgtctgtattcacaacaacagacaacagtataacgaaagcatctattcagtaatatcta |
45127648 |
T |
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