View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0172_high_1 (Length: 529)

Name: NF0172_high_1
Description: NF0172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0172_high_1
NF0172_high_1
[»] chr7 (52 HSPs)
chr7 (214-338)||(18221399-18221523)
chr7 (1-92)||(20585348-20585439)
chr7 (214-346)||(27745652-27745784)
chr7 (1-92)||(14161839-14161930)
chr7 (1-92)||(19282084-19282175)
chr7 (1-92)||(12466229-12466320)
chr7 (14-92)||(44373950-44374029)
chr7 (14-92)||(44382815-44382894)
chr7 (9-92)||(13699714-13699798)
chr7 (1-74)||(12466327-12466400)
chr7 (1-74)||(19282004-19282077)
chr7 (1-88)||(17071252-17071340)
chr7 (18-92)||(36705630-36705705)
chr7 (1-76)||(44373899-44373974)
chr7 (1-76)||(44382764-44382839)
chr7 (9-74)||(14220064-14220129)
chr7 (1-92)||(43277779-43277870)
chr7 (14-92)||(10660215-10660294)
chr7 (215-338)||(43970070-43970193)
chr7 (1-74)||(14161937-14162010)
chr7 (9-76)||(36705685-36705752)
chr7 (214-318)||(513879-513983)
chr7 (1-92)||(3286929-3287020)
chr7 (14-92)||(14220007-14220086)
chr7 (14-92)||(33000973-33001052)
chr7 (18-76)||(10660270-10660328)
chr7 (215-341)||(29460336-29460462)
chr7 (51-92)||(8852172-8852213)
chr7 (47-92)||(11053678-11053723)
chr7 (47-92)||(12371278-12371323)
chr7 (47-92)||(13133498-13133543)
chr7 (51-92)||(13150543-13150584)
chr7 (47-92)||(14183633-14183678)
chr7 (47-92)||(19558268-19558313)
chr7 (51-92)||(46387069-46387110)
chr7 (47-92)||(48213887-48213932)
chr7 (52-92)||(130989-131029)
chr7 (48-92)||(15281310-15281354)
chr7 (52-92)||(38519281-38519321)
chr7 (53-92)||(18075535-18075574)
chr7 (1-36)||(42461769-42461804)
chr7 (49-92)||(48809491-48809534)
chr7 (42-92)||(15576927-15576977)
chr7 (18-92)||(47094102-47094175)
chr7 (51-92)||(59399-59440)
chr7 (47-92)||(4070773-4070818)
chr7 (47-92)||(12128171-12128216)
chr7 (55-92)||(18875879-18875916)
chr7 (51-92)||(20619289-20619330)
chr7 (1-37)||(11525829-11525865)
chr7 (1-37)||(16996042-16996078)
chr7 (52-92)||(16996131-16996171)
[»] chr4 (59 HSPs)
chr4 (214-329)||(38761323-38761438)
chr4 (1-92)||(11424946-11425037)
chr4 (1-92)||(25090645-25090736)
chr4 (1-92)||(16997519-16997610)
chr4 (1-92)||(42874791-42874882)
chr4 (1-92)||(37018586-37018681)
chr4 (1-74)||(42874711-42874784)
chr4 (1-65)||(40906731-40906795)
chr4 (221-319)||(42440921-42441019)
chr4 (1-74)||(11424866-11424939)
chr4 (1-92)||(19734299-19734391)
chr4 (9-92)||(40229453-40229537)
chr4 (1-74)||(25090566-25090638)
chr4 (1-92)||(9637819-9637910)
chr4 (1-73)||(16042834-16042906)
chr4 (1-76)||(14650532-14650607)
chr4 (1-75)||(15364884-15364957)
chr4 (14-92)||(50160024-50160102)
chr4 (13-74)||(14548594-14548655)
chr4 (1-53)||(14548662-14548714)
chr4 (9-76)||(51992493-51992560)
chr4 (18-92)||(51992540-51992615)
chr4 (14-76)||(20535-20597)
chr4 (14-92)||(20573-20651)
chr4 (14-92)||(15364934-15365011)
chr4 (14-92)||(16042885-16042963)
chr4 (14-92)||(19738112-19738189)
chr4 (1-75)||(27995726-27995799)
chr4 (1-70)||(16997439-16997508)
chr4 (18-92)||(9871528-9871602)
chr4 (1-76)||(13036776-13036850)
chr4 (14-92)||(21061539-21061618)
chr4 (1-72)||(50159974-50160044)
chr4 (19-92)||(13036722-13036795)
chr4 (18-83)||(15608308-15608374)
chr4 (42-92)||(16027043-16027093)
chr4 (1-75)||(33244200-33244273)
chr4 (51-92)||(10357447-10357488)
chr4 (47-92)||(12622437-12622482)
chr4 (1-74)||(16296463-16296535)
chr4 (14-75)||(19738075-19738135)
chr4 (289-346)||(21257114-21257171)
chr4 (9-76)||(15608262-15608328)
chr4 (18-92)||(33244145-33244219)
chr4 (51-90)||(35812446-35812485)
chr4 (43-92)||(19435731-19435781)
chr4 (14-92)||(27995776-27995853)
chr4 (215-265)||(42327905-42327955)
chr4 (214-255)||(5185493-5185534)
chr4 (55-92)||(15042135-15042172)
chr4 (55-92)||(15112252-15112289)
chr4 (51-92)||(19609328-19609369)
chr4 (18-76)||(21061503-21061563)
chr4 (1-92)||(26444827-26444919)
chr4 (48-92)||(32467252-32467297)
chr4 (47-88)||(40906816-40906857)
chr4 (214-303)||(54421374-54421463)
chr4 (17-76)||(20499-20559)
chr4 (1-73)||(53631607-53631677)
[»] chr8 (48 HSPs)
chr8 (214-346)||(16484076-16484208)
chr8 (1-92)||(42818867-42818958)
chr8 (14-92)||(20179490-20179569)
chr8 (9-92)||(22584695-22584778)
chr8 (14-92)||(25849399-25849478)
chr8 (14-92)||(19699079-19699157)
chr8 (1-75)||(22259378-22259452)
chr8 (1-74)||(42818965-42819038)
chr8 (1-76)||(20179545-20179620)
chr8 (14-92)||(39695574-39695653)
chr8 (13-92)||(19929781-19929860)
chr8 (14-92)||(23418358-23418437)
chr8 (9-76)||(25849454-25849521)
chr8 (9-76)||(39695629-39695696)
chr8 (14-92)||(42266553-42266632)
chr8 (14-92)||(45471428-45471508)
chr8 (1-76)||(19929835-19929910)
chr8 (9-76)||(22584749-22584816)
chr8 (1-75)||(13665480-13665554)
chr8 (1-75)||(13724755-13724829)
chr8 (1-92)||(17907929-17908022)
chr8 (1-74)||(17217545-17217620)
chr8 (17-92)||(5760433-5760507)
chr8 (9-76)||(23418315-23418382)
chr8 (9-76)||(42266608-42266675)
chr8 (43-92)||(39695489-39695539)
chr8 (47-92)||(17217634-17217679)
chr8 (51-92)||(19128014-19128055)
chr8 (20-92)||(22244422-22244495)
chr8 (1-92)||(23669424-23669516)
chr8 (47-92)||(23888772-23888817)
chr8 (1-92)||(5083325-5083416)
chr8 (215-346)||(9180652-9180783)
chr8 (1-65)||(22253401-22253464)
chr8 (47-86)||(6102720-6102759)
chr8 (18-92)||(22259323-22259397)
chr8 (215-261)||(11629528-11629574)
chr8 (14-92)||(13665426-13665503)
chr8 (14-92)||(13724701-13724778)
chr8 (14-92)||(22473555-22473636)
chr8 (1-76)||(23888684-23888761)
chr8 (47-92)||(22253336-22253381)
chr8 (51-92)||(22318885-22318926)
chr8 (48-92)||(23947247-23947292)
chr8 (9-76)||(19699035-19699103)
chr8 (215-263)||(32230002-32230050)
chr8 (10-65)||(38988279-38988337)
chr8 (10-65)||(39019376-39019434)
[»] chr1 (47 HSPs)
chr1 (214-346)||(27643291-27643423)
chr1 (1-92)||(20241821-20241912)
chr1 (1-92)||(4596814-4596905)
chr1 (1-92)||(16059283-16059374)
chr1 (1-74)||(19675665-19675738)
chr1 (9-92)||(19675751-19675834)
chr1 (9-92)||(51475985-51476068)
chr1 (220-330)||(15846117-15846227)
chr1 (1-74)||(42911963-42912036)
chr1 (1-92)||(8276951-8277043)
chr1 (13-92)||(42912054-42912133)
chr1 (1-74)||(20241741-20241814)
chr1 (214-319)||(33978131-33978236)
chr1 (3-74)||(16059381-16059452)
chr1 (227-338)||(48408608-48408719)
chr1 (14-92)||(42696734-42696812)
chr1 (1-74)||(4596912-4596985)
chr1 (14-92)||(22349610-22349689)
chr1 (18-92)||(38057611-38057685)
chr1 (18-76)||(22349576-22349634)
chr1 (10-92)||(23967584-23967665)
chr1 (1-65)||(14800348-14800413)
chr1 (1-65)||(14809222-14809287)
chr1 (9-92)||(24726333-24726417)
chr1 (13-75)||(1642415-1642477)
chr1 (1-75)||(38057666-38057739)
chr1 (14-92)||(44891593-44891674)
chr1 (14-92)||(45754470-45754548)
chr1 (51-92)||(41227701-41227742)
chr1 (14-92)||(17904020-17904093)
chr1 (20-76)||(24726306-24726362)
chr1 (215-346)||(49508569-49508700)
chr1 (14-92)||(24720765-24720846)
chr1 (1-75)||(38888126-38888199)
chr1 (17-76)||(45754433-45754494)
chr1 (47-92)||(13301835-13301880)
chr1 (9-38)||(14800433-14800462)
chr1 (9-38)||(14809307-14809336)
chr1 (55-92)||(16381096-16381133)
chr1 (55-92)||(20587738-20587775)
chr1 (55-92)||(20592276-20592313)
chr1 (49-82)||(21047031-21047064)
chr1 (213-338)||(28037671-28037796)
chr1 (51-92)||(35088521-35088562)
chr1 (52-92)||(22124194-22124234)
chr1 (19-76)||(42696699-42696758)
chr1 (52-92)||(48520243-48520283)
[»] scaffold0301 (1 HSPs)
scaffold0301 (1-92)||(10829-10920)
[»] scaffold0074 (3 HSPs)
scaffold0074 (1-92)||(564-655)
scaffold0074 (9-74)||(492-557)
scaffold0074 (47-92)||(8065-8110)
[»] scaffold0040 (6 HSPs)
scaffold0040 (1-92)||(102065-102156)
scaffold0040 (1-74)||(102163-102236)
scaffold0040 (1-63)||(22057-22119)
scaffold0040 (1-63)||(10957-11019)
scaffold0040 (47-89)||(22142-22184)
scaffold0040 (51-91)||(11046-11086)
[»] scaffold0111 (2 HSPs)
scaffold0111 (1-92)||(19770-19861)
scaffold0111 (1-74)||(19868-19941)
[»] chr3 (54 HSPs)
chr3 (1-92)||(2842421-2842512)
chr3 (1-92)||(35065549-35065640)
chr3 (1-92)||(37427564-37427655)
chr3 (1-92)||(44269521-44269612)
chr3 (1-90)||(35353563-35353652)
chr3 (1-92)||(11258431-11258522)
chr3 (1-74)||(35065647-35065720)
chr3 (9-92)||(20417088-20417170)
chr3 (14-92)||(19569279-19569357)
chr3 (1-71)||(2842522-2842592)
chr3 (1-74)||(11258351-11258424)
chr3 (14-75)||(12512834-12512895)
chr3 (1-92)||(14153424-14153515)
chr3 (1-92)||(46751910-46752001)
chr3 (5-74)||(35353487-35353556)
chr3 (1-92)||(37037819-37037910)
chr3 (9-76)||(16728259-16728326)
chr3 (18-88)||(42327282-42327353)
chr3 (1-75)||(14642565-14642638)
chr3 (4-92)||(13919190-13919278)
chr3 (213-338)||(52964080-52964205)
chr3 (14-92)||(17259195-17259275)
chr3 (9-92)||(45531576-45531660)
chr3 (18-92)||(14642510-14642584)
chr3 (18-92)||(16728306-16728381)
chr3 (9-76)||(42327333-42327400)
chr3 (1-75)||(6158361-6158434)
chr3 (42-92)||(14519402-14519452)
chr3 (1-75)||(17693045-17693118)
chr3 (221-338)||(4741520-4741637)
chr3 (51-92)||(5214922-5214963)
chr3 (47-92)||(11192003-11192048)
chr3 (51-92)||(14507908-14507949)
chr3 (51-92)||(17044100-17044141)
chr3 (51-92)||(17519912-17519953)
chr3 (51-92)||(17534774-17534815)
chr3 (51-92)||(19884492-19884533)
chr3 (51-92)||(40807000-40807041)
chr3 (51-92)||(40811815-40811856)
chr3 (213-338)||(54548257-54548382)
chr3 (1-92)||(50349057-50349148)
chr3 (18-92)||(12512779-12512853)
chr3 (51-90)||(17538111-17538150)
chr3 (18-92)||(17693099-17693173)
chr3 (50-92)||(6155693-6155735)
chr3 (55-92)||(5206610-5206647)
chr3 (47-92)||(11886633-11886678)
chr3 (51-92)||(15932461-15932502)
chr3 (47-92)||(16044420-16044465)
chr3 (1-71)||(16049807-16049879)
chr3 (51-92)||(22307590-22307631)
chr3 (51-92)||(30175521-30175562)
chr3 (55-92)||(41173326-41173363)
chr3 (52-92)||(9577534-9577574)
[»] chr2 (38 HSPs)
chr2 (1-92)||(28653471-28653561)
chr2 (1-92)||(17306480-17306570)
chr2 (1-92)||(24515179-24515269)
chr2 (1-92)||(24835039-24835130)
chr2 (1-74)||(17306400-17306473)
chr2 (1-92)||(36839166-36839257)
chr2 (1-74)||(28653568-28653641)
chr2 (1-70)||(24515099-24515168)
chr2 (9-76)||(19357916-19357983)
chr2 (1-74)||(36839086-36839159)
chr2 (223-319)||(4244415-4244511)
chr2 (15-75)||(24815693-24815753)
chr2 (14-92)||(18389257-18389336)
chr2 (14-92)||(19357959-19358038)
chr2 (9-92)||(5985099-5985183)
chr2 (215-319)||(33054860-33054963)
chr2 (9-76)||(14693195-14693262)
chr2 (18-92)||(25045022-25045096)
chr2 (14-92)||(24815638-24815716)
chr2 (9-75)||(25044975-25045041)
chr2 (221-319)||(37670658-37670756)
chr2 (47-92)||(3538812-3538857)
chr2 (51-92)||(6576217-6576258)
chr2 (47-92)||(18391270-18391315)
chr2 (51-92)||(22689684-22689725)
chr2 (51-92)||(22694280-22694321)
chr2 (51-92)||(24436057-24436098)
chr2 (51-92)||(24781847-24781888)
chr2 (47-92)||(27851626-27851671)
chr2 (47-92)||(27860341-27860386)
chr2 (52-92)||(34136849-34136889)
chr2 (9-72)||(18389316-18389379)
chr2 (55-92)||(5032331-5032368)
chr2 (215-264)||(10748078-10748127)
chr2 (51-92)||(24883466-24883507)
chr2 (47-92)||(44071539-44071584)
chr2 (52-92)||(9974930-9974970)
chr2 (17-92)||(14693241-14693317)
[»] scaffold0203 (1 HSPs)
scaffold0203 (1-92)||(19110-19201)
[»] chr6 (45 HSPs)
chr6 (1-92)||(27126446-27126537)
chr6 (1-74)||(7825558-7825631)
chr6 (1-92)||(7825638-7825729)
chr6 (14-92)||(17229827-17229905)
chr6 (1-92)||(17105553-17105642)
chr6 (1-92)||(18260176-18260265)
chr6 (1-72)||(23528332-23528403)
chr6 (14-92)||(20136540-20136618)
chr6 (14-92)||(22196251-22196329)
chr6 (1-70)||(15895749-15895817)
chr6 (1-74)||(20136489-20136562)
chr6 (1-74)||(22196307-22196380)
chr6 (14-92)||(31735874-31735954)
chr6 (14-92)||(15895799-15895877)
chr6 (14-92)||(22376857-22376934)
chr6 (1-75)||(23083296-23083369)
chr6 (1-88)||(23492265-23492354)
chr6 (1-88)||(23497863-23497952)
chr6 (14-88)||(23528278-23528352)
chr6 (1-74)||(22212526-22212599)
chr6 (4-72)||(16245159-16245226)
chr6 (1-65)||(18177908-18177972)
chr6 (44-92)||(18203980-18204028)
chr6 (1-92)||(19656307-19656396)
chr6 (1-92)||(23538527-23538616)
chr6 (1-75)||(20411796-20411869)
chr6 (1-71)||(22376915-22376984)
chr6 (14-92)||(23083242-23083319)
chr6 (1-74)||(17229883-17229956)
chr6 (4-92)||(17743061-17743149)
chr6 (51-92)||(18708504-18708545)
chr6 (14-92)||(23500659-23500739)
chr6 (215-346)||(10158876-10159007)
chr6 (44-88)||(18177847-18177891)
chr6 (17-65)||(18203915-18203963)
chr6 (52-92)||(27573271-27573311)
chr6 (18-92)||(20411741-20411815)
chr6 (1-75)||(19829966-19830039)
chr6 (213-274)||(17215366-17215427)
chr6 (47-92)||(22212469-22212514)
chr6 (47-92)||(22556237-22556282)
chr6 (55-92)||(23017097-23017134)
chr6 (51-92)||(27323625-27323666)
chr6 (1-73)||(15705795-15705866)
chr6 (52-92)||(33442956-33442996)
[»] scaffold1662 (2 HSPs)
scaffold1662 (1-92)||(390-481)
scaffold1662 (1-74)||(488-561)
[»] chr5 (26 HSPs)
chr5 (1-76)||(20565378-20565453)
chr5 (9-75)||(10952944-10953010)
chr5 (14-92)||(15796292-15796370)
chr5 (15-92)||(25742844-25742921)
chr5 (214-346)||(10813067-10813199)
chr5 (1-65)||(23202765-23202830)
chr5 (1-65)||(23469623-23469688)
chr5 (17-92)||(14026869-14026947)
chr5 (18-92)||(21406627-21406702)
chr5 (42-92)||(8504702-8504752)
chr5 (1-76)||(25742790-25742867)
chr5 (14-92)||(25743593-25743671)
chr5 (237-319)||(33495063-33495145)
chr5 (47-92)||(25250851-25250896)
chr5 (47-92)||(25314636-25314681)
chr5 (47-92)||(29914339-29914384)
chr5 (48-92)||(20470085-20470129)
chr5 (9-74)||(25250910-25250977)
chr5 (9-74)||(25314695-25314762)
chr5 (1-37)||(25574729-25574765)
chr5 (1-37)||(25575922-25575958)
chr5 (18-92)||(20565433-20565508)
chr5 (9-74)||(21406684-21406749)
chr5 (51-88)||(31454932-31454969)
chr5 (51-88)||(31455545-31455582)
chr5 (1-37)||(25578295-25578331)
[»] scaffold0032 (3 HSPs)
scaffold0032 (1-73)||(63309-63381)
scaffold0032 (1-73)||(63192-63264)
scaffold0032 (55-92)||(63136-63173)
[»] scaffold0359 (2 HSPs)
scaffold0359 (1-76)||(15277-15352)
scaffold0359 (14-92)||(15328-15406)
[»] scaffold0073 (1 HSPs)
scaffold0073 (1-92)||(56733-56824)
[»] scaffold0151 (2 HSPs)
scaffold0151 (14-92)||(24178-24256)
scaffold0151 (14-76)||(24140-24202)
[»] scaffold0996 (1 HSPs)
scaffold0996 (214-319)||(1497-1602)
[»] scaffold0077 (4 HSPs)
scaffold0077 (14-76)||(2881-2943)
scaffold0077 (14-92)||(2919-2998)
scaffold0077 (18-92)||(14093-14167)
scaffold0077 (1-75)||(14039-14112)
[»] scaffold0529 (1 HSPs)
scaffold0529 (9-70)||(7321-7382)
[»] scaffold0002 (2 HSPs)
scaffold0002 (9-74)||(397465-397530)
scaffold0002 (14-92)||(397508-397587)
[»] scaffold0500 (2 HSPs)
scaffold0500 (1-65)||(7372-7436)
scaffold0500 (14-92)||(7423-7501)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-92)||(19603-19694)
[»] scaffold0065 (3 HSPs)
scaffold0065 (9-92)||(53595-53679)
scaffold0065 (1-75)||(54834-54907)
scaffold0065 (43-92)||(54912-54962)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-76)||(166685-166760)
[»] scaffold0220 (1 HSPs)
scaffold0220 (14-92)||(17424-17502)
[»] scaffold0170 (1 HSPs)
scaffold0170 (1-75)||(2488-2561)
[»] scaffold0054 (3 HSPs)
scaffold0054 (14-92)||(76001-76079)
scaffold0054 (1-74)||(76057-76130)
scaffold0054 (47-92)||(65945-65990)
[»] scaffold0019 (2 HSPs)
scaffold0019 (1-63)||(25846-25908)
scaffold0019 (56-92)||(25775-25811)
[»] scaffold0439 (3 HSPs)
scaffold0439 (1-74)||(1167-1240)
scaffold0439 (1-74)||(9027-9100)
scaffold0439 (42-92)||(11210-11260)
[»] scaffold0241 (2 HSPs)
scaffold0241 (9-74)||(1375-1440)
scaffold0241 (14-92)||(4585-4664)
[»] scaffold0107 (2 HSPs)
scaffold0107 (1-73)||(36000-36073)
scaffold0107 (53-92)||(36090-36129)
[»] scaffold0010 (3 HSPs)
scaffold0010 (1-71)||(127439-127511)
scaffold0010 (52-92)||(556-596)
scaffold0010 (47-92)||(127377-127422)
[»] scaffold0338 (2 HSPs)
scaffold0338 (1-75)||(11823-11899)
scaffold0338 (14-92)||(11768-11846)
[»] scaffold0321 (2 HSPs)
scaffold0321 (9-74)||(1011-1078)
scaffold0321 (15-92)||(954-1032)
[»] scaffold0018 (2 HSPs)
scaffold0018 (15-75)||(7667-7727)
scaffold0018 (14-92)||(7612-7690)
[»] scaffold0790 (2 HSPs)
scaffold0790 (43-90)||(5935-5982)
scaffold0790 (15-72)||(5869-5926)
[»] scaffold0630 (1 HSPs)
scaffold0630 (1-76)||(8059-8134)
[»] scaffold0379 (3 HSPs)
scaffold0379 (1-72)||(4806-4876)
scaffold0379 (14-92)||(4748-4826)
scaffold0379 (1-89)||(14797-14884)
[»] scaffold0042 (3 HSPs)
scaffold0042 (14-92)||(28292-28371)
scaffold0042 (9-92)||(47522-47608)
scaffold0042 (15-76)||(28253-28316)
[»] scaffold0589 (1 HSPs)
scaffold0589 (9-92)||(3275-3360)
[»] scaffold0331 (2 HSPs)
scaffold0331 (1-75)||(13132-13205)
scaffold0331 (14-92)||(13078-13155)
[»] scaffold0218 (1 HSPs)
scaffold0218 (1-75)||(9096-9169)
[»] scaffold0083 (2 HSPs)
scaffold0083 (3-92)||(896-986)
scaffold0083 (3-92)||(6200-6290)
[»] scaffold0075 (3 HSPs)
scaffold0075 (14-76)||(60234-60296)
scaffold0075 (14-92)||(60272-60350)
scaffold0075 (17-76)||(60198-60258)
[»] scaffold0039 (2 HSPs)
scaffold0039 (1-75)||(10914-10987)
scaffold0039 (18-92)||(10859-10933)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-92)||(109171-109264)
[»] scaffold0251 (1 HSPs)
scaffold0251 (16-92)||(20980-21059)
[»] scaffold1539 (2 HSPs)
scaffold1539 (18-92)||(524-598)
scaffold1539 (52-92)||(847-887)
[»] scaffold0149 (1 HSPs)
scaffold0149 (1-75)||(20613-20686)
[»] scaffold0098 (2 HSPs)
scaffold0098 (1-75)||(39079-39152)
scaffold0098 (18-92)||(39133-39207)
[»] scaffold0113 (1 HSPs)
scaffold0113 (47-92)||(34332-34377)
[»] scaffold0108 (3 HSPs)
scaffold0108 (47-92)||(7878-7923)
scaffold0108 (47-92)||(3161-3206)
scaffold0108 (7-75)||(5343-5410)
[»] scaffold0056 (1 HSPs)
scaffold0056 (47-92)||(66068-66113)
[»] scaffold0037 (1 HSPs)
scaffold0037 (14-92)||(113615-113695)
[»] scaffold0036 (1 HSPs)
scaffold0036 (51-92)||(78317-78358)
[»] scaffold0716 (1 HSPs)
scaffold0716 (14-74)||(873-933)
[»] scaffold0505 (2 HSPs)
scaffold0505 (15-92)||(1680-1759)
scaffold0505 (47-92)||(3725-3770)
[»] scaffold0292 (1 HSPs)
scaffold0292 (1-65)||(4568-4631)
[»] scaffold0207 (1 HSPs)
scaffold0207 (52-92)||(15461-15501)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-92)||(142439-142530)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-92)||(38324-38415)
scaffold0011 (17-92)||(125642-125716)
[»] scaffold0445 (2 HSPs)
scaffold0445 (17-92)||(2893-2970)
scaffold0445 (1-76)||(2949-3026)
[»] scaffold0213 (1 HSPs)
scaffold0213 (14-92)||(18092-18173)
[»] scaffold0737 (1 HSPs)
scaffold0737 (51-88)||(6638-6675)
[»] scaffold0507 (1 HSPs)
scaffold0507 (51-92)||(2843-2884)
[»] scaffold0375 (1 HSPs)
scaffold0375 (55-92)||(9309-9346)
[»] scaffold0371 (1 HSPs)
scaffold0371 (51-92)||(16656-16697)
[»] scaffold0064 (1 HSPs)
scaffold0064 (51-92)||(57804-57845)
[»] scaffold0012 (1 HSPs)
scaffold0012 (47-92)||(221378-221423)
[»] scaffold1283 (1 HSPs)
scaffold1283 (1-73)||(1601-1671)
[»] scaffold0293 (1 HSPs)
scaffold0293 (1-37)||(17324-17360)
[»] scaffold0282 (1 HSPs)
scaffold0282 (56-92)||(18339-18375)
[»] scaffold0001 (2 HSPs)
scaffold0001 (14-90)||(446357-446432)
scaffold0001 (1-92)||(497283-497374)


Alignment Details
Target: chr7 (Bit Score: 97; Significance: 2e-47; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 214 - 338
Target Start/End: Complemental strand, 18221523 - 18221399
Alignment:
Q  214 taatagggttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaat 313  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18221523 taataaggttgctcatactattgctagagcatccttatctcaccctagcccctatactttcaatgatgtaccatctactatgtactctttatttatgaat 18221424  T
Q  314 gaaatgcactaaatttgcttttgct 338  Q
     ||||||||||  ||| ||||||||    
T  18221423 aaaatgcactacgtttccttttgct 18221399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 20585348 - 20585439
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20585348 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaagccatcaacgtaaatgagtatgcatggact 20585439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 214 - 346
Target Start/End: Complemental strand, 27745784 - 27745652
Alignment:
Q  214 taatagggttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaat 313  Q
    ||||| ||||||||||| ||| ||||||||||||||||||||| |||||||||||  ||| ||||||||||||| ||||||||||||||||||| | |||    
T  27745784 taataaggttgctcatagtatcgctagagcatccttatctcaccctagcccctatgtttttaatgatgtaccatctactatgtactctttatttctaaat 27745685  T
Q  314 gaaatgcactaaatttgcttttgctcaacaaaa 346  Q
     ||||||||||| ||||  ||||||||| ||||    
T  27745684 aaaatgcactaattttgtctttgctcaaaaaaa 27745652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 14161930 - 14161839
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| |||| |||||||| ||||||||||||    
T  14161930 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaagccctcaatgtaaatgattatgcatggact 14161839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 19282084 - 19282175
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||| | |||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19282084 ataaatacactccaaaggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacgtaaatgagtatgcatggact 19282175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 12466320 - 12466229
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||| ||||||||||| ||||||||||||| |  |||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  12466320 ataaatacactcacagggcatcaagccctcaacttaaagaacaaaaactcacagggcatcaaaccctcaacgtaaatgagtatgcatggact 12466229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 44373950 - 44374029
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcaca-gggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||||||||||| || ||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  44373950 cagggcatcaagccctcaacttaaagagcaaaagctcacaagggcatcaagccctcaacgtaaatgagtatgcatggact 44374029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 44382815 - 44382894
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcaca-gggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||||||||||| || ||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  44382815 cagggcatcaagccctcaacttaaagagcaaaagctcacaagggcatcaagccctcaacgtaaatgagtatgcatggact 44382894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 13699798 - 13699714
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||| |||| |||||| ||||||||||||| |||||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  13699798 actcacaggacatcaagccctcaacttaaagagaaaaagctcacagggcatcaagccctcaacttcaaatgagtatgcatggact 13699714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12466400 - 12466327
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||||||||||| ||||||| | ||||||||||| || ||||||||||||||||||||||| ||||||||    
T  12466400 ataaatacactcccagagcatcaagctctcaacttaaagagcaaaagctcacagggcatcaagccctcaacgta 12466327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 19282004 - 19282077
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    ||||||||||| |||||||||||| ||||||||||||| || |||| |||||||||||||||||| ||||||||    
T  19282004 ataaatacacttccagggcatcaagccctcaacttaaagagcaaaatctcacagggcatcaagccctcaacgta 19282077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 17071340 - 17071252
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatg 88  Q
    ||||||||||||  |||||||||| |||| |||||||| || ||||||||||||||||||||||| ||||| | |||||||||||||||    
T  17071340 ataaatacactcatagggcatcaagcccttaacttaaatagcaaaagctcacagggcatcaagccctcaacttcaaatgagtatgcatg 17071252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 36705705 - 36705630
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||||||||||||| |||| || ||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  36705705 gcatcaaaccctcaacgtaaagagcaaaagctcacagggcatcaagccctcaacttcaaatgagtatgcatggact 36705630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 44373899 - 44373974
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    ||||||||||||| ||| |||||| ||||||||||||| || ||||||||||||||||||||||| ||||| ||||    
T  44373899 ataaatacactccaaggacatcaagccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacttaaa 44373974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 44382764 - 44382839
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    ||||||||||||| ||| |||||| ||||||||||||| || ||||||||||||||||||||||| ||||| ||||    
T  44382764 ataaatacactccaaggacatcaagccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacttaaa 44382839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 14220129 - 14220064
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||| ||||||||||||||||||||||| | || ||||||||||||||||||||||| ||||||||    
T  14220129 actcacagggcatcaaaccctcaacttatagagcaaaagctcacagggcatcaagccctcaacgta 14220064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 43277870 - 43277779
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||||||||| ||||||||||| |||||||| | || || |||||||||||| |||||||||| ||||| | |||||||||||||||||||    
T  43277870 ataaatacactcacagggcatcaagccctcaacat-aagagcaaaagctcacagagcatcaagccctcaacttcaaatgagtatgcatggact 43277779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 10660294 - 10660215
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||| |||| |||||||| |||| || ||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  10660294 cagggcgtcaagccctcaacgtaaagagcaaaagctcacagggcatcaagccctcaacttcaaatgagtatgcatggact 10660215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 215 - 338
Target Start/End: Original strand, 43970070 - 43970193
Alignment:
Q  215 aatagggttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaatg 314  Q
    |||| ||||||||||| |||||||||||| ||||||||  |  |||||||| ||| |||| |||||||||||| |||| ||||| ||||  ||||||| |    
T  43970070 aataaggttgctcatagtattgctagagcgtccttatccaatcctagcccccatattttctatgatgtaccatctactttgtaccctttgattatgaacg 43970169  T
Q  315 aaatgcactaaatttgcttttgct 338  Q
    ||||||| |||  |||| ||||||    
T  43970170 aaatgcattaatcttgcctttgct 43970193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14162010 - 14161937
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||||||||| ||||||||| ||||||||||||| || |||||||||   ||||||||||| ||||||||    
T  14162010 ataaatacactcccggggcatcaagccctcaacttaaagagcaaaagctcatgaggcatcaagccctcaacgta 14161937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 36705752 - 36705685
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||| ||| ||||||||||||||||||||| || |||||||||||| ||||||| || ||||||||||    
T  36705752 actcacagagcatcaaaccctcaacttaaagagcaaaagctcacagagcatcaaaccctcaacgtaaa 36705685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 513879 - 513983
Alignment:
Q  214 taatagggttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaat 313  Q
    ||||||||||||||||| |||||||||||| ||||||| |||  ||| || | ||| ||| |||| |||||| | |||| ||||||| ||| ||| ||||    
T  513879 taatagggttgctcatagtattgctagagcttccttatgtcatcctaacctccatatttttaatgttgtaccttctactttgtactccttaattacgaat 513978  T
Q  314 gaaat 318  Q
    |||||    
T  513979 gaaat 513983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 3286929 - 3287020
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||||||||| ||||||||||| |||||||| | || || |||||||||||| |||||||||| ||||| | |||||||||| ||| ||||    
T  3286929 ataaatacactcacagggcatcaagccctcaacgt-aagagcaaaagctcacagagcatcaagccatcaacttcaaatgagtatacattgact 3287020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 14220086 - 14220007
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaac-gtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| || | || ||| |||||||| |||||||||| |||||  ||||||||||||||||||||    
T  14220086 cagggcatcaagccctcaacgtatagagcaaaggctcacagagcatcaagccctcaactttaaatgagtatgcatggact 14220007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 33000973 - 33001052
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaac-gtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| ||| ||| ||| ||||||||||||| ||||| |||||  || |||||||||||||||||    
T  33000973 cagggcatcaagccctcaacgtaagaagcaaaggctcacagggcattaagccctcaactttatatgagtatgcatggact 33001052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 10660328 - 10660270
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||||||  |||||||||||| || ||||||||||||||| ||||||| ||||||||||    
T  10660328 gcatcaagacctcaacttaaagagcaaaagctcacagggcgtcaagccctcaacgtaaa 10660270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 341
Target Start/End: Complemental strand, 29460462 - 29460336
Alignment:
Q  215 aatagggttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaatg 314  Q
    |||| |||||| |||| |||||||||||| | ||||| | |   || |||| ||| |||| |||||||||||| |||| | ||| ||||| |||||||||    
T  29460462 aataaggttgcccatagtattgctagagctttcttatttaatcttatcccccatattttctatgatgtaccatctactttataccctttaattatgaatg 29460363  T
Q  315 aaatgcactaaatttgcttttgctcaa 341  Q
    ||||| | ||| ||||| |||||||||    
T  29460362 aaatgtattaattttgcctttgctcaa 29460336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 8852213 - 8852172
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  8852213 acagggcatcaagccctcaacttaaatgagtatgcatggact 8852172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 11053678 - 11053723
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||    
T  11053678 gctcacagggcatcaagccctcaacttaaatgagtattcatggact 11053723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 12371278 - 12371323
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  12371278 gctcacagggcatcaagccctcaacttgaatgagtatgcatggact 12371323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 13133543 - 13133498
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||||    
T  13133543 gctcacagggcatcaagccctcagcttaaatgagtatgcatggact 13133498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 13150584 - 13150543
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  13150584 acagggcatcaagccctcaacttaaatgagtatgcatggact 13150543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 14183678 - 14183633
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||    
T  14183678 gctcacagggcatcaagccctcaagttaaatgagtatgcatggact 14183633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 19558313 - 19558268
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  19558313 gctcacagggcatcaagccctcaactttaatgagtatgcatggact 19558268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 46387110 - 46387069
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  46387110 acagggcatcaagccctcaacttaaatgagtatgcatggact 46387069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 48213932 - 48213887
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  48213932 gctcacagggcatcaagccctcaactttaatgagtatgcatggact 48213887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 131029 - 130989
Alignment:
Q  52 cagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  131029 cagggcatcaagccctcaacttaaatgagtatgcatggact 130989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 15281310 - 15281354
Alignment:
Q  48 ctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||||    
T  15281310 ctcacagggcattaagccctcaacttaaatgagtatgcatggact 15281354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 38519281 - 38519321
Alignment:
Q  52 cagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  38519281 cagggcatcaagccctcaacttaaatgagtatgcatggact 38519321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 92
Target Start/End: Complemental strand, 18075574 - 18075535
Alignment:
Q  53 agggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  18075574 agggcatcaagccctcaacttaaatgagtatgcatggact 18075535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 42461769 - 42461804
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaactta 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  42461769 ataaatacactcccagggcatcaagccctcaactta 42461804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 48809534 - 48809491
Alignment:
Q  49 tcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||    
T  48809534 tcacagggcatcaagccctcaacttaaatgagtatgcgtggact 48809491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 15576977 - 15576927
Alignment:
Q  42 aaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||| ||||| ||||||||||||| ||||| | ||||||||||||||||||    
T  15576977 aaaaggctcatagggcatcaagccctcaactttaatgagtatgcatggact 15576927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 47094102 - 47094175
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||| |||||||| ||| | | |||||||| || ||||||||||| ||||| | ||||||||||||||||||    
T  47094102 gcatcaagccctcaacgtaaga-gcaaaagctcgcatggcatcaagccctcaactttaatgagtatgcatggact 47094175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 59440 - 59399
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| |||||||| |||||||||||    
T  59440 acagggcatcaagccctcaacttaaatgagcatgcatggact 59399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 4070773 - 4070818
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||| || ||||| || |||||||||||||||||    
T  4070773 gctcacagggcatcaaaccctcaacatatatgagtatgcatggact 4070818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 12128216 - 12128171
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||| |||||||||| || ||||| ||||||||||||||||||||    
T  12128216 gctcaaagggcatcaaaccctcaacttaaatgagtatgcatggact 12128171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 18875916 - 18875879
Alignment:
Q  55 ggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  18875916 ggcatcaagccctcaacttaaatgagtatgcatggact 18875879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 20619289 - 20619330
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| | ||||||||||||||||||    
T  20619289 acagggcatcaagccctcaacttgaatgagtatgcatggact 20619330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 11525865 - 11525829
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaa 37  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  11525865 ataaatatactcccagggcatcaagccctcaacttaa 11525829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 16996042 - 16996078
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaa 37  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  16996042 ataaatatactcccagggcatcaaactctcaacttaa 16996078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 16996131 - 16996171
Alignment:
Q  52 cagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||  |||| ||||||||||||||||||||    
T  16996131 cagggcatcaagcccccaacttaaatgagtatgcatggact 16996171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 1e-39; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 214 - 329
Target Start/End: Complemental strand, 38761438 - 38761323
Alignment:
Q  214 taatagggttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaat 313  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| |||||| ||||  ||||||||||||||||| ||| |||||||||||||||||||||    
T  38761438 taataaggttgctcatagtattgctagagcatccttatctcaccctagcctctatgttttcaatgatgtaccatctaccatgtactctttatttatgaat 38761339  T
Q  314 gaaatgcactaaattt 329  Q
    ||||||||||||||||    
T  38761338 gaaatgcactaaattt 38761323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 11424946 - 11425037
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11424946 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacgtaaatgagtatgcatggact 11425037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 25090645 - 25090736
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  25090645 ataaatacactcccagggcatcaagccctcaacttaaaaagcaaaagctcacagggcatcaagccctcaaagtaaatgagtatgcatggact 25090736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 16997519 - 16997610
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||  |||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16997519 ataaatacactcatagggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacgtaaatgagtatgcatggact 16997610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 42874791 - 42874882
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||  ||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  42874791 ataaatacactgtcagggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacgtaaatgagtatccatggact 42874882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 37018586 - 37018681
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatca----agccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||    | || ||||||||||||||||||||||||||    
T  37018586 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaatatatccctcaacgtaaatgagtatgcatggact 37018681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42874711 - 42874784
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||||||||    
T  42874711 ataaatacactcccagggcatcaaaccctcaacttaaagagcaaaagctcacagggtatcaagccctcaacgta 42874784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40906731 - 40906795
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagcc 65  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40906731 ataaatacactcacagggcatcaaaccctcaacttaaagagaaaaagctcacagggcatcaagcc 40906795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 221 - 319
Target Start/End: Complemental strand, 42441019 - 42440921
Alignment:
Q  221 gttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaatgaaatg 319  Q
    |||||||||||| ||||||||||||| |||||||||  || |||| ||| ||||||||||||||||| ||| | |||||||||||||| |||| |||||    
T  42441019 gttgctcatactgttgctagagcatctttatctcacattaacccccatattttcaatgatgtaccatctaccacgtactctttatttacgaattaaatg 42440921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11424866 - 11424939
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    ||||||||||||||| || ||||||||||||||||||| |||||||||||||| | ||||||||| ||||||||    
T  11424866 ataaatacactcccaaggtatcaaaccctcaacttaaagagaaaaagctcacatgacatcaagccctcaacgta 11424939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 19734299 - 19734391
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||||||||| ||||||||||| ||||||||||||| || ||| |||||||| |||||||||| ||||| |  ||||||||||||||||||    
T  19734299 ataaatacactcacagggcatcaagccctcaacttaaagagcaaaggctcacagagcatcaagccctcaacttccaatgagtatgcatggact 19734391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 40229453 - 40229537
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||| ||| ||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  40229453 actcacagagcatcaagccctcaacttaaagagtaaaagctcacagggcatcaagccctcaacttcaaatgagtatgcatggact 40229537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25090566 - 25090638
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||||||||||||| ||||| ||||||||||||| || |||||||||||||| |||||||| ||||||||    
T  25090566 ataaatacactcccaggggatcaa-ccctcaacttaaagagcaaaagctcacagggaatcaagccctcaacgta 25090638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 9637819 - 9637910
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaac-gtaaatgagtatgcatggact 92  Q
    |||||||||||| ||||||||||| |||||||| | || || |||||||||||| |||||||||| |||||  ||||||||||||||||||||    
T  9637819 ataaatacactcacagggcatcaagccctcaacat-aagagcaaaagctcacagagcatcaagccctcaactttaaatgagtatgcatggact 9637910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16042834 - 16042906
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt 73  Q
    ||||||| |||| ||||||||||| |||||||| |||| || ||||||||||||||||||||||| |||||||    
T  16042834 ataaatatactcacagggcatcaagccctcaacataaagagcaaaagctcacagggcatcaagccctcaacgt 16042906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 14650532 - 14650607
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||||||||||| |||||||||||||| |||||||||| || |||||| || |||||||||||||  |||||||||    
T  14650532 ataaatacactcacagggcatcaaaccttcaacttaaagagcaaaagcgcatagggcatcaagcccccaacgtaaa 14650607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 15364884 - 15364957
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| ||||||||||| |||||||| ||| | | ||||||||||||||||||||||| |||||||||    
T  15364884 ataaatacactcacagggcatcaagccctcaacataaga-gcaaaagctcacagggcatcaagccctcaacgtaa 15364957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 50160024 - 50160102
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||||||  ||| || ||| ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  50160024 cagggcatcaagccctcaacgcaaagagcaaaggctcacagggcatcaagccctcaacttgaatgagtatgcatggact 50160102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 14548594 - 14548655
Alignment:
Q  13 ccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||| || |||||    
T  14548594 ccagggcatcaagccctcaacttaaacagcaaaagctcacagggcatcaagccctccacgta 14548655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14548662 - 14548714
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcaca 53  Q
    |||||||||||||||||||||||| ||||||||||||| || |||||||||||    
T  14548662 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaagctcaca 14548714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 51992493 - 51992560
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||| ||| ||||||||||||||||||||| || |||||||||||| ||||||| || ||||||||||    
T  51992493 actcacagagcatcaaaccctcaacttaaagagcaaaagctcacagagcatcaaaccctcaacgtaaa 51992560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 51992540 - 51992615
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||||||||||||| |||| || |||||||||||||||||||| || ||||| | ||||||||||||| |||||    
T  51992540 gcatcaaaccctcaacgtaaagagcaaaagctcacagggcatcaatccctcaacttcaaatgagtatgcagggact 51992615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 20535 - 20597
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    ||||||||||| |||||||| |||| |||||| ||||||||||||||||| | ||||||||||    
T  20535 cagggcatcaagccctcaacgtaaagagaaaaggctcacagggcatcaagtcctcaacgtaaa 20597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 20573 - 20651
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||  ||||||| |||| || ||| ||||||| ||||||||||| ||||| || |||||||||||||||||    
T  20573 cagggcatcaagtcctcaacgtaaagagcaaaggctcacatggcatcaagccctcaacttatatgagtatgcatggact 20651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 15364934 - 15365011
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| |||  || ||| ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  15364934 cagggcatcaagccctcaacgtaaggagcaaaggctcacagggcatcaagccctcaac-tcaatgagtatgcatggact 15365011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 16042885 - 16042963
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| |  | || ||| |||||||||||||||| || ||||| ||||||||||||||||||||    
T  16042885 cagggcatcaagccctcaacgtgtagagcaaacgctcacagggcatcaaaccctcaacttaaatgagtatgcatggact 16042963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 19738112 - 19738189
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| |||  || ||| ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  19738112 cagggcatcaagccctcaacgtaaggagcaaaggctcacagggcatcaagccctcaac-tcaatgagtatgcatggact 19738189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 27995726 - 27995799
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| ||||||||||| |||||||| | || || |||||||||||||| |||||||| |||||||||    
T  27995726 ataaatacactcacagggcatcaagccctcaacat-aagagcaaaagctcacaggggatcaagccctcaacgtaa 27995799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16997439 - 16997508
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaa 70  Q
    ||||||||||| | |||||||||| ||||||||||||| || ||||| |||| ||| |||||||||||||    
T  16997439 ataaatacacttctagggcatcaagccctcaacttaaatagcaaaagttcactgggaatcaagccttcaa 16997508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 9871602 - 9871528
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    ||||||| |||||||| ||| | | ||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  9871602 gcatcaagccctcaacgtaaga-gcaaaagctcacagggcatcaagccctcaacttcaaatgagtatgcatggact 9871528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13036850 - 13036776
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||||||||||| ||||||||||| |||||||| | || || ||||||||||||  ||||||||| ||||||||||    
T  13036850 ataaatacactcacagggcatcaagccctcaacat-aagagcaaaagctcacagaacatcaagccctcaacgtaaa 13036776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 21061539 - 21061618
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaac-gtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| |||| || ||| |||||| || |||||||||||||||  |||| |||||||||||||||    
T  21061539 cagggcatcaagccctcaacataaagagcaaaggctcaccggacatcaagccttcaactttaaaagagtatgcatggact 21061618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 50159974 - 50160044
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacg 72  Q
    |||||||||||| ||||| ||||| |||||||| ||| | | ||||||||||||||||||||||| ||||||    
T  50159974 ataaatacactcacaggggatcaagccctcaacataaga-gcaaaagctcacagggcatcaagccctcaacg 50160044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 13036795 - 13036722
Alignment:
Q  19 catcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||| |||||||| ||||| | ||||||||||||||||||||||| ||||| | ||| |||||||||||||||    
T  13036795 catcaagccctcaacgtaaaa-gcaaaagctcacagggcatcaagccctcaacttcaaacgagtatgcatggact 13036722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 15608308 - 15608374
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtat 83  Q
    ||||||| |||||||| |||| || ||||||||||||||||||||||| ||||| | ||||||||||    
T  15608308 gcatcaagccctcaacgtaaagagcaaaagctcacagggcatcaagccctcaacttcaaatgagtat 15608374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 16027093 - 16027043
Alignment:
Q  42 aaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||| ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  16027093 aaaaggctcacagggcatcaagccctcaactttaatgagtatgcatggact 16027043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 33244273 - 33244200
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| ||||||||||| | |||||| ||| | | |||||||||||| |||||||||| |||||||||    
T  33244273 ataaatacactcacagggcatcaagctctcaacataaga-gcaaaagctcacagagcatcaagccctcaacgtaa 33244200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 10357488 - 10357447
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  10357488 acagggcatcaagccctcaacttaaatgagtatgcatggact 10357447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 12622437 - 12622482
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  12622437 gctcacagggcatcaagccctcaactttaatgagtatgcatggact 12622482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16296463 - 16296535
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||||||| ||||||||||| |||||||| | || || ||||||||||||  ||||||||| ||||||||    
T  16296463 ataaatacactcacagggcatcaagccctcaacat-aagagcaaaagctcacagatcatcaagccctcaacgta 16296535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 19738075 - 19738135
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    ||||||||||| |||||||| ||| | | ||||||||||||||||||||||| |||||||||    
T  19738075 cagggcatcaagccctcaacataaga-gcaaaagctcacagggcatcaagccctcaacgtaa 19738135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 289 - 346
Target Start/End: Original strand, 21257114 - 21257171
Alignment:
Q  289 tactatgtactctttatttatgaatgaaatgcactaaatttgcttttgctcaacaaaa 346  Q
    ||||||||||||||||||| | ||||||||||||||| ||||  ||||||||| ||||    
T  21257114 tactatgtactctttatttctaaatgaaatgcactaattttgtctttgctcaaaaaaa 21257171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 15608262 - 15608328
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||| ||||||||||| || |||||||||| || ||| |||||||| |||||||||| ||||||||||    
T  15608262 actcacagggcatcaagccatcaacttaaagag-aaaggctcacagagcatcaagccctcaacgtaaa 15608328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 33244219 - 33244145
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaac-gtaaatgagtatgcatggact 92  Q
    ||||||| |||||||| ||| | | ||||||||||||||||||||||| |||||  | ||||||||||||||||||    
T  33244219 gcatcaagccctcaacgtaaga-gcaaaagctcacagggcatcaagccctcaactttgaatgagtatgcatggact 33244145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 35812485 - 35812446
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatgga 90  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  35812485 acagggcatcaagccctcaacttaaatgagtatgcatgga 35812446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 19435781 - 19435731
Alignment:
Q  43 aaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||||||||| |||||||||| ||||| | |||||||||||||||||||    
T  19435781 aaaagctcacagagcatcaagccctcaacttcaaatgagtatgcatggact 19435731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 27995776 - 27995853
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||| ||||| |||||||| |||  || ||| ||||||||||||||||||| ||||  | ||||||||||||||||||    
T  27995776 caggggatcaagccctcaacgtaaggagcaaaggctcacagggcatcaagccctcaa-atcaatgagtatgcatggact 27995853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 42327955 - 42327905
Alignment:
Q  215 aatagggttgctcatactattgctagagcatccttatctcactctagcccc 265  Q
    ||||| |||||||||| |||||||||||||||  |||||||| ||||||||    
T  42327955 aatagagttgctcataatattgctagagcatcactatctcaccctagcccc 42327905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 5185534 - 5185493
Alignment:
Q  214 taatagggttgctcatactattgctagagcatccttatctca 255  Q
    ||||||||||||||||| ||| |||||||| |||||||||||    
T  5185534 taatagggttgctcatagtatagctagagcttccttatctca 5185493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 15042172 - 15042135
Alignment:
Q  55 ggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  15042172 ggcatcaagccctcaacttaaatgagtatgcatggact 15042135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 15112252 - 15112289
Alignment:
Q  55 ggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  15112252 ggcatcaagccctcaacttaaatgagtatgcatggact 15112289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 19609328 - 19609369
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||| | ||||| ||||||||||||||||||||    
T  19609328 acagggcatcaagtcctcaacttaaatgagtatgcatggact 19609369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 21061503 - 21061563
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaa--gctcacagggcatcaagccttcaacgtaaa 76  Q
    ||||||||||||||||||||| || |||   ||||||||||||||||||| ||||| ||||    
T  21061503 gcatcaaaccctcaacttaaagagcaaataggctcacagggcatcaagccctcaacataaa 21061563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 26444827 - 26444919
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaa-ag-ctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||| |||| ||||||||||| ||| |||| || | || ||| || |||||||||||||||||| ||||| | ||||||||||||||||||    
T  26444827 ataaatatactcacagggcatcaagcccccaacatatagagcaaatagactcacagggcatcaagccctcaac-ttaatgagtatgcatggact 26444919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 32467297 - 32467252
Alignment:
Q  48 ctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||||||||||||||| ||||| | |||||||||||||||||||    
T  32467297 ctcacagggcatcaagccctcaacttcaaatgagtatgcatggact 32467252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 40906816 - 40906857
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatg 88  Q
    ||||||||||||||||||| ||||| | ||||||||||||||    
T  40906816 gctcacagggcatcaagccctcaacttgaatgagtatgcatg 40906857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 303
Target Start/End: Complemental strand, 54421463 - 54421374
Alignment:
Q  214 taatagggttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactcttt 303  Q
    ||||| ||||| ||||| |||||||||||| |||||||| ||  |||||||| ||| |||| || ||||| ||  |||| ||||||||||    
T  54421463 taataaggttggtcatagtattgctagagcttccttatcacatcctagcccccatattttctatcatgtaacaactactttgtactcttt 54421374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 20499 - 20559
Alignment:
Q  17 ggcatcaaaccctcaacttaaaaagaaaaag-ctcacagggcatcaagccttcaacgtaaa 76  Q
    |||||||| |||||||||||| |  ||| || |||||||||||||||||| ||||||||||    
T  20499 ggcatcaagccctcaacttaagagcaaataggctcacagggcatcaagccctcaacgtaaa 20559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 53631677 - 53631607
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt 73  Q
    ||||||||||||| |||||||||| |||||||||||   || ||| |||| |||||||||||||| |||||||    
T  53631677 ataaatacactcc-agggcatcaagccctcaacttattgagcaaaggctc-cagggcatcaagccctcaacgt 53631607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 214 - 346
Target Start/End: Complemental strand, 16484208 - 16484076
Alignment:
Q  214 taatagggttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaat 313  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| |||| ||||||  ||| ||||||||||||| ||||||||||||||||||| | |||    
T  16484208 taataaggttgctcatagtattgctagagcatccttatctcaccctagtccctatgtttttaatgatgtaccatctactatgtactctttatttctaaat 16484109  T
Q  314 gaaatgcactaaatttgcttttgctcaacaaaa 346  Q
    |||||||||||| ||||  ||||||||| ||||    
T  16484108 gaaatgcactaattttgtctttgctcaaaaaaa 16484076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 42818958 - 42818867
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||| ||||||||||| ||||||||||||| || |||||||||||||||||||| || ||||||||||||||||||||||||||    
T  42818958 ataaatacactctcagggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaatccctcaacgtaaatgagtatgcatggact 42818867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 20179569 - 20179490
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcaca-gggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||||||||||| || ||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  20179569 cagggcatcaagccctcaacttaaagagcaaaagctcacaagggcatcaagccctcaacgtaaatgagtatgcatggact 20179490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 22584778 - 22584695
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||| |||||||||||||||||||| |||| ||  |||||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  22584778 actcacagggcatcaaaccctcaacgtaaagagctaaagctcatagggcatcaagccctcaacttaaatgagtatgcatggact 22584695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 25849478 - 25849399
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  25849478 cagggcatcaaaccctcaacgtaaagagcaaaagctcacagggcatcaagccctcaacttcaaatgagtatgcatggact 25849399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 19699079 - 19699157
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||||| || |||||||||||||||||    
T  19699079 cagggcatcaaaccctcaacgtaaagagcaaaggctcacagggcatcaagccctcaacttatatgagtatgcatggact 19699157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 22259452 - 22259378
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| ||||||||||| ||||||||||||| || |||||||||||| |||||||||| |||||||||    
T  22259452 ataaatacactcacagggcatcaagccctcaacttaaagagcaaaagctcacagagcatcaagccctcaacgtaa 22259378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42819038 - 42818965
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    ||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| |||||||||| ||||||||    
T  42819038 ataaatacactcccagggcataaaaccctaaacttaaagaaaaaaagctcacagagcatcaagccctcaacgta 42818965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 20179620 - 20179545
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    ||||||||||||| ||| |||||| ||||||||||||| || ||||||||||||||||||||||| ||||| ||||    
T  20179620 ataaatacactccaaggacatcaagccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacttaaa 20179545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 39695653 - 39695574
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| |||| || ||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  39695653 cagggcatcaagccctcaacgtaaagagcaaaagctcacagggcatcaagccctcaacttcaaatgagtatgcatggact 39695574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 19929860 - 19929781
Alignment:
Q  13 ccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||| ||| |||| |||| || ||| |||||||||||||||||||  |||| ||||||||||||||||||||    
T  19929860 ccagggcatcaatcccccaacgtaaagagcaaaggctcacagggcatcaagcccccaacttaaatgagtatgcatggact 19929781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 23418358 - 23418437
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||| |||| |||||||| |||| || ||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  23418358 cagggcgtcaagccctcaacataaagagcaaaagctcacagggcatcaagccctcaacttcaaatgagtatgcatggact 23418437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 25849521 - 25849454
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||| ||||||||||| ||||||||||||| || |||||||||||||||||||| || ||||||||||    
T  25849521 actcacagggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaaaccctcaacgtaaa 25849454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 39695696 - 39695629
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||| ||||||||| | ||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  39695696 actcacagggcatcgagccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacgtaaa 39695629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 42266632 - 42266553
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| |||| || |||||| |||||||||||||||| ||||| | |||||||||||||||||||    
T  42266632 cagggcatcaagccctcaacgtaaagagcaaaagcgcacagggcatcaagccctcaacttcaaatgagtatgcatggact 42266553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 45471508 - 45471428
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaa--gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||||||||| | || |||   ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  45471508 cagggcatcaagccctcaacttatagagcaaataggctcacagggcatcaagccctcaacttaaatgagtatgcatggact 45471428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 19929910 - 19929835
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||||||||||| ||||||||||||||||||||||| | || |||||||  ||||||||||| ||  |||||||||    
T  19929910 ataaatacactcacagggcatcaaaccctcaacttatagagcaaaagctgccagggcatcaatcccccaacgtaaa 19929835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 22584816 - 22584749
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||| ||||||||||| ||||||||||||| || |||| ||||||||||||||| || ||||||||||    
T  22584816 actcacagggcatcaagccctcaacttaaagagcaaaaactcacagggcatcaaaccctcaacgtaaa 22584749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 13665554 - 13665480
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||| ||||| ||||||||||| |||||||| ||| |  ||||| |||||||||||||||| |||||||||||    
T  13665554 ataaatgcactcacagggcatcaagccctcaacataagagcaaaaatctcacagggcatcaaggcttcaacgtaa 13665480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 13724829 - 13724755
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||| ||||| ||||||||||| |||||||| ||| |  ||||| |||||||||||||||| |||||||||||    
T  13724829 ataaatgcactcacagggcatcaagccctcaacataagagcaaaaatctcacagggcatcaaggcttcaacgtaa 13724755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 17908022 - 17907929
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaa--gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||| | || ||||||||||| |||||||||||||||| |||   ||||||||||||||||||  ||||| | |||||| |||||||||||    
T  17908022 ataaatatattcacagggcatcaagccctcaacttaaaaagcaaataggctcacagggcatcaagctctcaactttaatgagcatgcatggact 17907929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17217545 - 17217620
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaag--aaaaagctcacagggcatcaagccttcaacgta 74  Q
    ||||||| |||| ||||||||||| ||||||||||||| ||  || | ||||||||||||||||||| ||||||||    
T  17217545 ataaatatactcacagggcatcaagccctcaacttaaagagcaaataggctcacagggcatcaagccctcaacgta 17217620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 5760433 - 5760507
Alignment:
Q  17 ggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||| |||||||||||   || ||| |||| |||||||||||||| ||||| ||||||||||||||||||||    
T  5760433 ggcatcaagccctcaacttattgagcaaaggctc-cagggcatcaagccctcaacttaaatgagtatgcatggact 5760507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 23418315 - 23418382
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||| |||||||||||  |||||||||||| || ||||||||||||||| ||||||| ||||| ||||    
T  23418315 actcacagggcatcaagacctcaacttaaagagtaaaagctcacagggcgtcaagccctcaacataaa 23418382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 42266675 - 42266608
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||| ||| |||| || |||| |||||||| || ||||||||||||||||||||||| ||||||||||    
T  42266675 actcacagagcataaagccctaaacttaaagagcaaaagctcacagggcatcaagccctcaacgtaaa 42266608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 39695539 - 39695489
Alignment:
Q  43 aaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  39695539 aaaagctcacagggcatcaagccctcaacttcaaatgagtatgcatggact 39695489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 17217634 - 17217679
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||| ||||| || |||||||||||||||||    
T  17217634 gctcacagggcatcaagccctcaacttatatgagtatgcatggact 17217679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 19128014 - 19128055
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  19128014 acagggcatcaagccctcaacttaaatgagtatgcatggact 19128055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 22244422 - 22244495
Alignment:
Q  20 atcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaac-gtaaatgagtatgcatggact 92  Q
    |||||||||||||| |||| || ||| |||||||||||||||| || |||||  |||||||||| |||||||||    
T  22244422 atcaaaccctcaacgtaaagagcaaaggctcacagggcatcaaaccctcaactttaaatgagtaagcatggact 22244495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 23669424 - 23669516
Alignment:
Q  1 ataaatacactcccagggcatcaaa-ccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||| ||||||| |||||||||||| |||||||| ||| | | || ||||||||| |||||||||| ||||| | |||||||||||||||||||    
T  23669424 ataagtacactcacagggcatcaaagccctcaacataaga-gcaatagctcacagagcatcaagccctcaacttcaaatgagtatgcatggact 23669516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 23888772 - 23888817
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  23888772 gctcacagggcatcaagccctcaactttaatgagtatgcatggact 23888817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 5083416 - 5083325
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaactta-aaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||| ||||||||||||||||||||||||||||    || ||| |||| ||||||||||||||   ||| ||||||| ||||||||||||    
T  5083416 ataaatatactcccagggcatcaaaccctcaacttatttgagcaaaggctc-cagggcatcaagcccctaacttaaatgaatatgcatggact 5083325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 346
Target Start/End: Complemental strand, 9180783 - 9180652
Alignment:
Q  215 aatagggttgctcatactattgctagagcatccttatctcactctagcccctata-ctttcaatgatgtaccatatactatgtactctttatttatgaat 313  Q
    ||||| |||||||||| |||||||||||||||  |||||||| |||||||| ||| ||||| || ||||| ||  |||| ||||  | ||| || | |||    
T  9180783 aatagagttgctcataatattgctagagcatcactatctcaccctagcccccatatctttc-atcatgtaacacctactttgtatccgttaatttttaat 9180685  T
Q  314 gaaatgcactaaatttgcttttgctcaacaaaa 346  Q
    |||||| ||||| ||||| ||||||||| ||||    
T  9180684 gaaatgaactaactttgcctttgctcaaaaaaa 9180652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22253464 - 22253401
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagcc 65  Q
    |||||||||||||||||||||||| |||||||||||   || ||| |||| ||||||||||||||    
T  22253464 ataaatacactcccagggcatcaagccctcaacttattgagtaaaggctc-cagggcatcaagcc 22253401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 86
Target Start/End: Complemental strand, 6102759 - 6102720
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgca 86  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  6102759 gctcacagggcatcaagccctcaacttaaatgagtatgca 6102720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 22259397 - 22259323
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaac-gtaaatgagtatgcatggact 92  Q
    ||||||| |||||||| ||| | | |||||||||||||||||||||| ||||||  | ||||||||||||||||||    
T  22259397 gcatcaagccctcaacgtaaga-gcaaaagctcacagggcatcaagctttcaactttgaatgagtatgcatggact 22259323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 215 - 261
Target Start/End: Original strand, 11629528 - 11629574
Alignment:
Q  215 aatagggttgctcatactattgctagagcatccttatctcactctag 261  Q
    ||||| |||||||||| ||||||||||||||| ||||||||| ||||    
T  11629528 aatagagttgctcatagtattgctagagcatcattatctcaccctag 11629574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 13665503 - 13665426
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||  | ||||| |||  || ||| ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  13665503 cagggcatcaaggcttcaacgtaaggagcaaaggctcacagggcatcaagccctcaac-tcaatgagtatgcatggact 13665426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 13724778 - 13724701
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||  | ||||| |||  || ||| ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  13724778 cagggcatcaaggcttcaacgtaaggagcaaaggctcacagggcatcaagccctcaac-tcaatgagtatgcatggact 13724701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 22473555 - 22473636
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaa-agaaaaa--gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||||||| | || |||   |||||||||||||||| || ||||| | ||||||||||||||||||    
T  22473555 cagggcatcaagccctcaacttaatagagcaaataggctcacagggcatcaaaccctcaactttaatgagtatgcatggact 22473636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 23888684 - 23888761
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaag--aaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    ||||||| |||| ||||||||||| |||||||||| || ||  || | |||||||||||||||||||  |||||||||    
T  23888684 ataaatatactcacagggcatcaagccctcaactttaagagcaaataggctcacagggcatcaagcccccaacgtaaa 23888761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 22253381 - 22253336
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||| ||||||||||||||  |||| ||||||||||||||||||||    
T  22253381 gctcccagggcatcaagcccccaacttaaatgagtatgcatggact 22253336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 22318926 - 22318885
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| | ||||||||||||||||||    
T  22318926 acagggcatcaagccctcaactttaatgagtatgcatggact 22318885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 23947247 - 23947292
Alignment:
Q  48 ctcacagggcatcaagccttcaac-gtaaatgagtatgcatggact 92  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||    
T  23947247 ctcacagggcatcaagccctcaactttaaatgagtatgcatggact 23947292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 19699035 - 19699103
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaag-ctcacagggcatcaagccttcaacgtaaa 76  Q
    |||| ||||||||||| |||||||||||| |  ||| || ||||||||||||||| || ||||||||||    
T  19699035 actcacagggcatcaagccctcaacttaagagcaaataggctcacagggcatcaaaccctcaacgtaaa 19699103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 32230050 - 32230002
Alignment:
Q  215 aatagggttgctcatactattgctagagcatccttatctcactctagcc 263  Q
    |||||||| ||||| ||||| |||||||| |||||||||||| ||||||    
T  32230050 aatagggtcgctcacactatagctagagcttccttatctcaccctagcc 32230002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 38988279 - 38988337
Alignment:
Q  10 ctcccagggcatcaaaccctcaacttaaaaag---aaaaagctcacagggcatcaagcc 65  Q
    ||||||||||||||||||| ||||||| | ||   |||| |||||||||||||||||||    
T  38988279 ctcccagggcatcaaacccccaacttatagagcgaaaaaggctcacagggcatcaagcc 38988337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 39019376 - 39019434
Alignment:
Q  10 ctcccagggcatcaaaccctcaacttaaaaag---aaaaagctcacagggcatcaagcc 65  Q
    ||||||||||||||||||| ||||||| | ||   |||| |||||||||||||||||||    
T  39019376 ctcccagggcatcaaacccccaacttatagagcgaaaaaggctcacagggcatcaagcc 39019434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 214 - 346
Target Start/End: Complemental strand, 27643423 - 27643291
Alignment:
Q  214 taatagggttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaat 313  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| |||| ||||||  ||| ||||||||||||| ||||||||||||||||||| | |||    
T  27643423 taataaggttgctcatagtattgctagagcatccttatctcaccctagtccctatgtttttaatgatgtaccatctactatgtactctttatttctaaat 27643324  T
Q  314 gaaatgcactaaatttgcttttgctcaacaaaa 346  Q
    |||||||||||| ||||  ||||||||| ||||    
T  27643323 gaaatgcactaattttgtctttgctcaaaaaaa 27643291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 20241821 - 20241912
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20241821 ataaatacactcccagggcatcaagccctcaacttaaagagtaaaagctcacagggcatcaagccctcaacgtaaatgagtatgcatggact 20241912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 4596905 - 4596814
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||| |||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4596905 ataaatacactcctagggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacgtaaatgagtatgcatggact 4596814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 16059374 - 16059283
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  16059374 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaagctcacatggcatcatgccctcaacgtaaatgagtatgcatggact 16059283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 19675665 - 19675738
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||    
T  19675665 ataaatacactcccagggcatcaaaccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacgta 19675738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 19675751 - 19675834
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||| ||||||||||||||||||||||||| || |||||||||||||| ||||| || ||||||||||||||||||||||||||    
T  19675751 actctcagggcatcaaaccctcaacttaaagagcaaaagctcacagggaatcaaaccctcaacgtaaatgagtatgcatggact 19675834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 51475985 - 51476068
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||| ||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  51475985 actcacagggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacttaaatgagtatgcatggact 51476068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 15846227 - 15846117
Alignment:
Q  220 ggttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaatgaaatg 319  Q
    |||| |||||| |||||||||| ||||||||| | || ||| |||||||   ||||||||| |||||| ||||||||||||||||||||||| |||||||    
T  15846227 ggtttctcatagtattgctagaacatccttatattaccctaacccctatgtcttcaatgatataccatctactatgtactctttatttatgagtgaaatg 15846128  T
Q  320 cactaaatttg 330  Q
    |||||||||||    
T  15846127 cactaaatttg 15846117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42911963 - 42912036
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||    
T  42911963 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacgta 42912036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 8277043 - 8276951
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||||||||| |||||||||||||||||||| |||| || ||||||||||||||||||||||| ||||| | |||||||||||| ||||||    
T  8277043 ataaatacactcacagggcatcaaaccctcaacgtaaagagcaaaagctcacagggcatcaagccctcaacttcaaatgagtatgcgtggact 8276951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 42912054 - 42912133
Alignment:
Q  13 ccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||| ||||||||||||  || ||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  42912054 ccagggcatcaagccctcaacttaatgagcaaaagctcacagggcatcaagccctcaacgtaaatgagtacgcatggact 42912133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20241741 - 20241814
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  20241741 ataaatacactcccagggcatcaagtcctcaacttaaagagaaaaagctcacaggacatcaagccctcaacgta 20241814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 319
Target Start/End: Complemental strand, 33978236 - 33978131
Alignment:
Q  214 taatagggttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaat 313  Q
    ||||||||||||||||| |||||||||||| ||||||| |||  |||||||| ||| ||| |||| |||||| | |||| ||||||| ||| ||||||||    
T  33978236 taatagggttgctcatagtattgctagagcttccttatgtcatcctagcccccatatttttaatgttgtaccttctactttgtactccttaattatgaat 33978137  T
Q  314 gaaatg 319  Q
    ||||||    
T  33978136 gaaatg 33978131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 16059452 - 16059381
Alignment:
Q  3 aaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||||| ||||||||||| ||||||||||||| || ||||||||||||| ||||||||| ||||||||    
T  16059452 aaatacactctcagggcatcaagccctcaacttaaagagcaaaagctcacaggacatcaagccctcaacgta 16059381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 227 - 338
Target Start/End: Complemental strand, 48408719 - 48408608
Alignment:
Q  227 catactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaatgaaatgcactaaa 326  Q
    ||||||||||||||| |||  ||||||||||||| ||||| ||||||| || |  ||| || || ||| |||| |||||||||||||||||| |||||||    
T  48408719 catactattgctagaacatttttatctcactctaacccctctactttctataacatactatctattatttactatttatttatgaatgaaatacactaaa 48408620  T
Q  327 tttgcttttgct 338  Q
     |||||||||||    
T  48408619 cttgcttttgct 48408608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 42696734 - 42696812
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| |||| || ||| ||||||||||||||||||| ||||| || |||||||||||||||||    
T  42696734 cagggcatcaagccctcaacgtaaagagcaaaggctcacagggcatcaagccctcaacatatatgagtatgcatggact 42696812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4596985 - 4596912
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||| ||||||||||  ||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||    
T  4596985 ataagtacactcccaaagcatcaagccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacgta 4596912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 22349610 - 22349689
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||| |||| |||||||| |||| || ||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  22349610 cagggcttcaagccctcaacgtaaagagcaaaagctcacagggcatcaagccctcaacttcaaatgagtatgcatggact 22349689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 38057685 - 38057611
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||||||||||||| ||| | | ||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  38057685 gcatcaaaccctcaacgtaaga-gcaaaagctcacagggcatcaagccctcaacttcaaatgagtatgcatggact 38057611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 22349576 - 22349634
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    ||||||| ||||||||||||| || ||||||||||||||| ||||||| ||||||||||    
T  22349576 gcatcaagccctcaacttaaagagcaaaagctcacagggcttcaagccctcaacgtaaa 22349634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 23967584 - 23967665
Alignment:
Q  10 ctcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| |||||||| |    || |||||||| |||||||||||||| ||||| ||||||||||||||||||||    
T  23967584 ctcccagggcatcaagccctcaacgtgttgagcaaaagctc-cagggcatcaagccctcaacttaaatgagtatgcatggact 23967665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14800348 - 14800413
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaactta-aaaagaaaaagctcacagggcatcaagcc 65  Q
    ||||||||| ||||||||||||||||||||||||||    || |||||||||||||||||||||||    
T  14800348 ataaatacattcccagggcatcaaaccctcaacttatttgagcaaaagctcacagggcatcaagcc 14800413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14809222 - 14809287
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaactta-aaaagaaaaagctcacagggcatcaagcc 65  Q
    ||||||||| ||||||||||||||||||||||||||    || |||||||||||||||||||||||    
T  14809222 ataaatacattcccagggcatcaaaccctcaacttatttgagcaaaagctcacagggcatcaagcc 14809287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 24726333 - 24726417
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaac-gtaaatgagtatgcatggact 92  Q
    |||| |||||| ||||||||||||| |||| || ||| ||||||| ||||||||||| |||||  |||| |||||||||||||||    
T  24726333 actcacagggcgtcaaaccctcaacgtaaagagcaaaggctcacatggcatcaagccctcaactttaaacgagtatgcatggact 24726417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 1642415 - 1642477
Alignment:
Q  13 ccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| |||||||| |||| || ||||||||||||  ||||||||| |||||||||    
T  1642415 ccagggcatcaagccctcaacataaagagcaaaagctcacagatcatcaagccctcaacgtaa 1642477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 38057739 - 38057666
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| ||||||||||| |||||||| | || || |||||||||||| ||||||| || |||||||||    
T  38057739 ataaatacactcacagggcatcaagccctcaacat-aagagcaaaagctcacagagcatcaaaccctcaacgtaa 38057666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 44891593 - 44891674
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaa-agaaaaa--gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||||||||||| | || |||   |||||||||||||||| || ||||| | ||||||||||||||||||    
T  44891593 cagggcatcaaaccctcaacttaatagagcaaataggctcacagggcatcaaaccctcaactttaatgagtatgcatggact 44891674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 45754470 - 45754548
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| |||| || ||| ||||| ||| ||||||||| ||||| |  |||||||||||||||||    
T  45754470 cagggcatcaagccctcaacgtaaagagcaaaggctcataggacatcaagccctcaacttttatgagtatgcatggact 45754548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 41227742 - 41227701
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  41227742 acagggcatcaagccctcaacttaaatgagtatgcatggact 41227701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 17904093 - 17904020
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaac-gtaaatgagtatgcatggact 92  Q
    |||||||||||||||||||||||| |||      |||||||||||||||||| |||||  || |||||||||||||||||    
T  17904093 cagggcatcaaaccctcaacttaataag------ctcacagggcatcaagccctcaactttagatgagtatgcatggact 17904020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 24726306 - 24726362
Alignment:
Q  20 atcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    ||||||||||||||||||| || |||| |||||||||| |||| || ||||||||||    
T  24726306 atcaaaccctcaacttaaagagcaaaaactcacagggcgtcaaaccctcaacgtaaa 24726362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 346
Target Start/End: Original strand, 49508569 - 49508700
Alignment:
Q  215 aatagggttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaatg 314  Q
    |||| ||| |||||||  || |||||||| |||||||| ||| |||||||| ||| |||| |||||||||||| || | || || |||||||  ||||||    
T  49508569 aataaggtagctcataacatagctagagcttccttatcccaccctagcccccatattttctatgatgtaccatctagtttgaacactttattattgaatg 49508668  T
Q  315 aaatgcactaaatttgcttttgctcaacaaaa 346  Q
    | ||| | ||| |||| | |||||||| ||||    
T  49508669 atatgaattaattttgatgttgctcaaaaaaa 49508700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 24720846 - 24720765
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaa-agaaaaa--gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||||||| | || |||   |||||||||||||||| || ||||| | ||||||||||||||||||    
T  24720846 cagggcatcaagccctcaacttaatagagcaaataggctcacagggcatcaaaccctcaactttaatgagtatgcatggact 24720765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 38888199 - 38888126
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| || |||||||| |||||||| ||| | | |||||||||||| |||||||| | |||||||||    
T  38888199 ataaatacactcacaaggcatcaagccctcaacataaga-gcaaaagctcacagagcatcaagtcctcaacgtaa 38888126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 45754433 - 45754494
Alignment:
Q  17 ggcatcaaaccctcaacttaaaaagaaaaa--gctcacagggcatcaagccttcaacgtaaa 76  Q
    |||||||| ||||||||||||| || |||   ||||||||||||||||||| ||||||||||    
T  45754433 ggcatcaagccctcaacttaaagagcaaataggctcacagggcatcaagccctcaacgtaaa 45754494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 13301835 - 13301880
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||| |||||||||| || ||||| ||||||||||||||||||||    
T  13301835 gctcatagggcatcaaaccctcaacttaaatgagtatgcatggact 13301880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 14800433 - 14800462
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaa 38  Q
    ||||||||||||||||||||||||||||||    
T  14800433 actcccagggcatcaaaccctcaacttaaa 14800462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 14809307 - 14809336
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaa 38  Q
    ||||||||||||||||||||||||||||||    
T  14809307 actcccagggcatcaaaccctcaacttaaa 14809336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 16381096 - 16381133
Alignment:
Q  55 ggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  16381096 ggcatcaagccctcaacataaatgagtatgcatggact 16381133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 20587738 - 20587775
Alignment:
Q  55 ggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  20587738 ggcatcaagccctcaacttaaatgagtatgcatggact 20587775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 20592276 - 20592313
Alignment:
Q  55 ggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  20592276 ggcatcaagccctcaacttaaatgagtatgcatggact 20592313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 82
Target Start/End: Complemental strand, 21047064 - 21047031
Alignment:
Q  49 tcacagggcatcaagccttcaacgtaaatgagta 82  Q
    ||||||||||||||||| ||||||||||||||||    
T  21047064 tcacagggcatcaagccctcaacgtaaatgagta 21047031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 338
Target Start/End: Original strand, 28037671 - 28037796
Alignment:
Q  213 ttaatagggttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaa 312  Q
    |||||||||||||||||| ||| |||||||| || ||||||||  |||||||| ||  |||  ||  |||||| |  | | |||||||||| ||  ||||    
T  28037671 ttaatagggttgctcatagtatagctagagcttctttatctcatcctagcccccatcttttttatagtgtaccttcaaatttgtactctttgttcttgaa 28037770  T
Q  313 tgaaatgcactaaatttgcttttgct 338  Q
    ||||||||| ||| ||||| ||||||    
T  28037771 tgaaatgcattaattttgcctttgct 28037796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 35088521 - 35088562
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||| |||||||||| ||||| ||||||||||||||||||||    
T  35088521 acagagcatcaagccctcaacttaaatgagtatgcatggact 35088562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 22124194 - 22124234
Alignment:
Q  52 cagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||  |||| ||||||||||||||||||||    
T  22124194 cagggcatcaagcccccaacttaaatgagtatgcatggact 22124234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 42696699 - 42696758
Alignment:
Q  19 catcaaaccctcaacttaaaaagaaaaa--gctcacagggcatcaagccttcaacgtaaa 76  Q
    |||||| ||||||||||||| || |||   ||||||||||||||||||| ||||||||||    
T  42696699 catcaagccctcaacttaaagagcaaataggctcacagggcatcaagccctcaacgtaaa 42696758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 48520243 - 48520283
Alignment:
Q  52 cagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||| ||||| |||||||| |||||||||||    
T  48520243 cagggcatcaagccctcaacttaaatgagcatgcatggact 48520283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10829 - 10920
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10829 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacgtaaatgagtatgcatggact 10920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 76; Significance: 7e-35; HSPs: 3)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 564 - 655
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  564 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaagctcatagggcatcaagccttcaacgtaaatgagtatgcatggact 655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 492 - 557
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||| ||| ||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  492 actcacagagcatcaagccctcaacttaaagagaaaaagcacacagggcatcaagccctcaacgta 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 8065 - 8110
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||| |||||||||||||| ||||| ||||||||||||||| ||||    
T  8065 gctcccagggcatcaagccctcaacttaaatgagtatgcatagact 8110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 76; Significance: 7e-35; HSPs: 6)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 102156 - 102065
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  102156 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacgtaaatgagtatgcatggact 102065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 102236 - 102163
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    ||||||||||||||||||||||||  |||||||||||| || |||||||||||||||||||| |||||||||||    
T  102236 ataaatacactcccagggcatcaagtcctcaacttaaagagcaaaagctcacagggcatcaaaccttcaacgta 102163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 22057 - 22119
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaag 63  Q
    ||||||||||||  |||||||||| |||||||  ||||||| |||||||||||||||||||||    
T  22057 ataaatacactcatagggcatcaagccctcaagataaaaagcaaaagctcacagggcatcaag 22119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10957 - 11019
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaag 63  Q
    ||||||||||||  |||||||||| |||||||  |||| || |||||||||||||||||||||    
T  10957 ataaatacactcatagggcatcaagccctcaagataaagagcaaaagctcacagggcatcaag 11019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 22142 - 22184
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatgg 89  Q
    |||||||||||||||||||  |||| |||||||||||||||||    
T  22142 gctcacagggcatcaagcccccaacttaaatgagtatgcatgg 22184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 11046 - 11086
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggac 91  Q
    |||||||||||||||  |||| |||||||||||||||||||    
T  11046 acagggcatcaagcccccaacttaaatgagtatgcatggac 11086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19861 - 19770
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19861 ataaatacactcctagggtatcaaaccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacgtaaatgagtatgcatggact 19770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19941 - 19868
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||    
T  19941 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacgta 19868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 2842512 - 2842421
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  2842512 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaagctcatagggcatcaagccctcaacgtaaatgagtatgcatggact 2842421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 35065640 - 35065549
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  35065640 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaggccctcaacgtaaatgagtatgcatggact 35065549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 37427564 - 37427655
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||| |||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  37427564 ataaatacactcacagggcatcaaaccctaaacttaaagagcaaaagctcacagggcatcaagccctcaacttaaatgagtatgcatggact 37427655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 44269521 - 44269612
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  44269521 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaagctcacatggcataaagccctcaacgtaaatgagtatgcatggact 44269612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 35353563 - 35353652
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatgga 90  Q
    ||||||||||||| |||||||||| ||||||||||||| || ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  35353563 ataaatacactcctagggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaagtcatcaacgtaaatgagtatgcatgga 35353652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 11258431 - 11258522
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||| || |||||||| ||||||||||||| || ||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  11258431 ataaatacactctcatggcatcaagccctcaacttaaagagcaaaagttcacagagcatcaagccttcaacgtaaatgagtatgcatggact 11258522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35065720 - 35065647
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||    
T  35065720 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacgta 35065647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 20417088 - 20417170
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||| ||||||||||| ||||||||||||| || |||||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  20417088 actcacagggcatcaagccctcaacttaaagagcaaaagctcacagggca-caagccctcaacttaaatgagtatgcatggact 20417170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 19569357 - 19569279
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| |||| || ||| ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  19569357 cagggcatcaagccctcaacgtaaagagcaaaggctcacagggcatcaagccctcaacttaaatgagtatgcatggact 19569279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 2842592 - 2842522
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaac 71  Q
    |||||||||||||||||||||||| ||||||||||||| || |||| |||| ||||||||||||| |||||    
T  2842592 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaaactcaaagggcatcaagccctcaac 2842522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11258351 - 11258424
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    ||||||||||||||| |||||||| |||| |||||||| || ||||||||||| ||||||||||| ||||||||    
T  11258351 ataaatacactcccatggcatcaagccctaaacttaaagagcaaaagctcacatggcatcaagccctcaacgta 11258424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 12512895 - 12512834
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    ||||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  12512895 cagggcatcaagccctcaacttaaagagaaaaagctcacagagcatcaagccctcaacgtaa 12512834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 14153515 - 14153424
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||||||||| ||||||||||| |||||||| | || || |||||||||||| |||||||||| ||||| | |||||||||||||||||||    
T  14153515 ataaatacactcacagggcatcaagccctcaacat-aagagcaaaagctcacagagcatcaagccctcaacttcaaatgagtatgcatggact 14153424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 46751910 - 46752001
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||||||||| ||||||||||| |||||||| | || || |||||||||||| |||||||||| ||||| | |||||||||||||||||||    
T  46751910 ataaatacactcacagggcatcaagccctcaacgt-aagagcaaaagctcacagagcatcaagccctcaacttcaaatgagtatgcatggact 46752001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 35353487 - 35353556
Alignment:
Q  5 atacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||||||||||||||| || |||||||||| || ||||||||||| ||||||||| | ||||||||    
T  35353487 atacactcccagggcatcaagccgtcaacttaaagagcaaaagctcacatggcatcaagtcctcaacgta 35353556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 37037819 - 37037910
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||||||||| ||||||||||| |||||||| | || || |||||||||||| |||||||||| ||||| | |||||| ||||||||||||    
T  37037819 ataaatacactcacagggcatcaagccctcaacat-aagagcaaaagctcacagagcatcaagccctcaacttcaaatgattatgcatggact 37037910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 16728259 - 16728326
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||| ||||||||||||||||||| ||||| || |||||||||||  |||||||||| ||||||||||    
T  16728259 actcacagggcatcaaaccctcaaattaaagagcaaaagctcacaacgcatcaagccctcaacgtaaa 16728326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 42327353 - 42327282
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatg 88  Q
    |||||||||||||||| |||| || ||||||||||| ||||||||||| ||||| | |||||||||||||||    
T  42327353 gcatcaaaccctcaacgtaaagagcaaaagctcacatggcatcaagccctcaacttcaaatgagtatgcatg 42327282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 14642638 - 14642565
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| ||||||||||| |||||||| ||| | | |||||||||||| |||||||||| |||||||||    
T  14642638 ataaatacactcacagggcatcaagccctcaacataaga-gcaaaagctcacagagcatcaagccctcaacgtaa 14642565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 13919190 - 13919278
Alignment:
Q  4 aatacactcccagggcatcaaaccctcaacttaa-aaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||| |||||||||||||||| ||||||||||||   |||||| |||| ||||||||||||||  |||| | ||||||||||||||||||    
T  13919190 aatatactcccagggcatcaagccctcaacttaattgagaaaaggctc-cagggcatcaagcccccaacatgaatgagtatgcatggact 13919278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 338
Target Start/End: Complemental strand, 52964205 - 52964080
Alignment:
Q  213 ttaatagggttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaa 312  Q
    |||||||||||||||||| ||| |||||| | |||||||||||  |||||||| ||  |||  ||  ||||||||  ||| |||||||||| ||  ||||    
T  52964205 ttaatagggttgctcatagtatagctagatcttccttatctcatcctagcccccatcttttttatagtgtaccatcaactttgtactctttgttcttgaa 52964106  T
Q  313 tgaaatgcactaaatttgcttttgct 338  Q
    ||||||||| ||| ||||| ||||||    
T  52964105 tgaaatgcattaattttgcctttgct 52964080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 17259275 - 17259195
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaa-ag-ctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||||||||| | |||||| || |||||| ||||||||||| ||||  ||||||||||||||||||||    
T  17259275 cagggcatcaagccctcaacttatagagaaaatagtctcacatggcatcaagccctcaatttaaatgagtatgcatggact 17259195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 45531660 - 45531576
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||| ||| ||||||| ||||||||||||| || | ||||||| ||||||||||||| ||||| |  ||||||||||||||||||    
T  45531660 actcacagagcatcaagccctcaacttaaagagcagaagctcatagggcatcaagccctcaacttccaatgagtatgcatggact 45531576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 14642584 - 14642510
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    ||||||| |||||||| ||| | | ||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  14642584 gcatcaagccctcaacgtaaga-gcaaaagctcacagggcatcaagccctcaacttcaaatgagtatgcatggact 14642510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 16728306 - 16728381
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaac-gtaaatgagtatgcatggact 92  Q
    ||||||| |||||||| |||| || |||||||||||||||||||| || |||||  | ||||||||||||||||||    
T  16728306 gcatcaagccctcaacgtaaagagcaaaagctcacagggcatcaaaccctcaactttgaatgagtatgcatggact 16728381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 42327400 - 42327333
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||| ||| ||||||| ||||||||||||| || |||||||||||| ||||||| || ||||||||||    
T  42327400 actcacagagcatcaagccctcaacttaaagagcaaaagctcacagagcatcaaaccctcaacgtaaa 42327333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 6158361 - 6158434
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| ||||||||||| |||||||| | || || ||||||||||||  ||||||||| |||||||||    
T  6158361 ataaatacactcacagggcatcaagccctcaacat-aagagcaaaagctcacagaacatcaagccctcaacgtaa 6158434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 14519402 - 14519452
Alignment:
Q  42 aaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||| ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  14519402 aaaaggctcacagggcatcaagccctcaactttaatgagtatgcatggact 14519452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 17693045 - 17693118
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| ||||||||||| |||||||| | || || | |||||||||| |||||||||| |||||||||    
T  17693045 ataaatacactcacagggcatcaagccctcaacat-aagagcacaagctcacagagcatcaagccctcaacgtaa 17693118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 221 - 338
Target Start/End: Complemental strand, 4741637 - 4741520
Alignment:
Q  221 gttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaatgaaatgc 320  Q
    |||||||||| ||||||||||||||| |||||  || |||||||| ||| |||   |||||||||   |||| | |||| |||| ||||||||||||||     
T  4741637 gttgctcatagtattgctagagcatctttatccaaccctagcccccatattttttgtgatgtaccgactactttatactttttaattatgaatgaaatga 4741538  T
Q  321 actaaatttgcttttgct 338  Q
    | ||| |||| |||||||    
T  4741537 attaactttgtttttgct 4741520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 5214922 - 5214963
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  5214922 acagggcatcaagccctcaacttaaatgagtatgcatggact 5214963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 11192003 - 11192048
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  11192003 gctcacagggcatcaagccctcaactttaatgagtatgcatggact 11192048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 14507908 - 14507949
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  14507908 acagggcatcaagccctcaacttaaatgagtatgcatggact 14507949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 17044100 - 17044141
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  17044100 acagggcatcaagccctcaacttaaatgagtatgcatggact 17044141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 17519953 - 17519912
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  17519953 acagggcatcaagccctcaacttaaatgagtatgcatggact 17519912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 17534815 - 17534774
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  17534815 acagggcatcaagccctcaacttaaatgagtatgcatggact 17534774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 19884533 - 19884492
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||| ||||| ||||||||||||||||||||||||||    
T  19884533 acagggcattaagccctcaacgtaaatgagtatgcatggact 19884492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 40807000 - 40807041
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  40807000 acagggcatcaagccctcaacttaaatgagtatgcatggact 40807041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 40811815 - 40811856
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  40811815 acagggcatcaagccctcaacttaaatgagtatgcatggact 40811856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 213 - 338
Target Start/End: Complemental strand, 54548382 - 54548257
Alignment:
Q  213 ttaatagggttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaa 312  Q
    ||||||| |||||||||| ||| |||||||| |||||||||||  |||||||| ||  |||  ||  ||||||||  ||| |||||||||| ||  ||||    
T  54548382 ttaatagagttgctcatagtatagctagagcttccttatctcatcctagcccccatcttttttatagtgtaccatcaactttgtactctttgttcttgaa 54548283  T
Q  313 tgaaatgcactaaatttgcttttgct 338  Q
    |||||| || ||| ||||| ||||||    
T  54548282 tgaaatccattaattttgcctttgct 54548257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 50349148 - 50349057
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    ||||||||||||  |||||||| | |||||||| ||| | | |||||||||||| |||||||||| ||||| | |||||| ||||||||||||    
T  50349148 ataaatacactcatagggcatctagccctcaacgtaaga-gcaaaagctcacagagcatcaagccctcaacttcaaatgaatatgcatggact 50349057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 12512853 - 12512779
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    ||||||| |||||||| ||| | | |||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  12512853 gcatcaagccctcaacgtaaga-gcaaaagctcacagggcatcaatccctcaacttaaaatgagtatgcatggact 12512779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 17538111 - 17538150
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatgga 90  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  17538111 acagggcatcaagccctcaacttaaatgagtatgcatgga 17538150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 17693099 - 17693173
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    ||||||| |||||||| ||| | | ||||||||||||||||||||||| ||||| | |||||||| ||||||||||    
T  17693099 gcatcaagccctcaacgtaaga-gcaaaagctcacagggcatcaagccctcaacttcaaatgagtgtgcatggact 17693173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 6155693 - 6155735
Alignment:
Q  50 cacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||| ||||| | ||||||||||||||||||    
T  6155693 cacagggcatcaagccctcaactttaatgagtatgcatggact 6155735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 5206647 - 5206610
Alignment:
Q  55 ggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  5206647 ggcatcaagccctcaacttaaatgagtatgcatggact 5206610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 11886678 - 11886633
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||| ||||||||||| ||||| || |||||||||||||||||    
T  11886678 gctcacatggcatcaagccctcaacatatatgagtatgcatggact 11886633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 15932502 - 15932461
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||    
T  15932502 acagggcatcaagccctcaacttaaatgagtatgcattgact 15932461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 16044420 - 16044465
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||| ||||| |||||| ||| |||||||||    
T  16044420 gctcacagggcatcaagccctcaacttaaatgggtacgcatggact 16044465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16049807 - 16049879
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaa--aagctcacagggcatcaagccttcaac 71  Q
    ||||||| |||| ||||||||||| |||||||| |||| |||||  | |||||| |||||||||||| |||||    
T  16049807 ataaatatactcacagggcatcaagccctcaacgtaaagagaaaataggctcacggggcatcaagccctcaac 16049879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 22307631 - 22307590
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| | ||||||||||||||||||    
T  22307631 acagggcatcaagccctcaacttgaatgagtatgcatggact 22307590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 30175562 - 30175521
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| |||||||||| |||||||||    
T  30175562 acagggcatcaagccctcaacttaaatgagtaagcatggact 30175521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 41173363 - 41173326
Alignment:
Q  55 ggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  41173363 ggcatctagccctcaacgtaaatgagtatgcatggact 41173326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 9577534 - 9577574
Alignment:
Q  52 cagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||  |||| ||||||||||||||||||||    
T  9577534 cagggcatcaagcccccaacttaaatgagtatgcatggact 9577574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 4e-30; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 28653561 - 28653471
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28653561 ataaatacactcccagagcatcaaaccatcaacttaaagagcaaaagctcacagggcatcaagcc-tcaacgtaaatgagtatgcatggact 28653471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17306480 - 17306570
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||| |||||||||| |||||||||||||| | ||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  17306480 ataaatacactcctagggcatcaatccctcaacttaaaa-gcaaaagctcacaaggcatcaagccttcagcgtaaatgagtatgcatggact 17306570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 24515179 - 24515269
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||| ||| || |||||||||||||||||||    
T  24515179 ataaatacactcccagggcatcaagccctcaacttaaagagaaaaagctcagagggcatcaagccctcagcg-aaatgagtatgcatggact 24515269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 24835130 - 24835039
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||| || ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| | ||||||||||||||||||    
T  24835130 ataaatacagtcacagggcatcaaaccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacttgaatgagtatgcatggact 24835039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17306400 - 17306473
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||    
T  17306400 ataaatacactcccagggcatcaaaccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacgta 17306473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 36839166 - 36839257
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||| || |||||||| ||||||||||||| || ||||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  36839166 ataaatacactctcaaggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaagctctcaacataaatgagtatgcatggact 36839257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28653641 - 28653568
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||||||||||||||||||| ||||||||||||| || |||||||||| |||||||||||| ||||||||    
T  28653641 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaagctcacggggcatcaagccctcaacgta 28653568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 24515099 - 24515168
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaa 70  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||| |||||||||||||||||| ||||    
T  24515099 ataaatacactcacagggcatcaagccctcaacttaaagagaaaaatctcacagggcatcaagccctcaa 24515168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 19357916 - 19357983
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||| ||| ||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  19357916 actcacagagcatcaaaccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacgtaaa 19357983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36839086 - 36839159
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||||||| |||||||| || ||||||||||||| || ||||||||||| ||||||||||| ||||||||    
T  36839086 ataaatacactctcagggcatgaagccctcaacttaaagagcaaaagctcacatggcatcaagccctcaacgta 36839159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 223 - 319
Target Start/End: Original strand, 4244415 - 4244511
Alignment:
Q  223 tgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaatgaaatg 319  Q
    |||||||| ||| ||||||||||| ||||||||  ||||| | || | ||||||| ||||||||| | || |||||||||| |||||||||||||||    
T  4244415 tgctcatagtatagctagagcatctttatctcatcctagctcttacattttcaattatgtaccatcttctttgtactctttgtttatgaatgaaatg 4244511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 24815753 - 24815693
Alignment:
Q  15 agggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||| | ||||||||||||| || ||||||||||||||||||||||| |||||||||    
T  24815753 agggcatcgagccctcaacttaaagagcaaaagctcacagggcatcaagccgtcaacgtaa 24815693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 18389336 - 18389257
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    ||||||||| | ||||||||  ||| || ||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  18389336 cagggcatctagccctcaacgcaaagagcaaaagctcacagggcatcaagccctcaacttcaaatgagtatgcatggact 18389257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 19357959 - 19358038
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaac-gtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| |||| || |||||||||||||||||||| || |||||  | ||||||||||||||||||    
T  19357959 cagggcatcaagccctcaacgtaaagagcaaaagctcacagggcatcaaaccctcaactttgaatgagtatgcatggact 19358038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 5985099 - 5985183
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaac-gtaaatgagtatgcatggact 92  Q
    |||| ||| |||||||||||||||| |||| || ||| |||||||||| |||||||| |||||  || |||||||||||||||||    
T  5985099 actcacagcgcatcaaaccctcaacgtaaagagcaaaggctcacagggaatcaagccctcaactttagatgagtatgcatggact 5985183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 319
Target Start/End: Original strand, 33054860 - 33054963
Alignment:
Q  215 aatagggttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaatg 314  Q
    |||| |||||||||  |||| |||||||||||| |||||||| ||||||||||||  ||  ||||||||||| ||| | |||| |||||| |||| ||||    
T  33054860 aatatggttgctcactctatagctagagcatccctatctcaccctagcccctatatctttgatgatgtaccacata-tttgtattctttaattattaatg 33054958  T
Q  315 aaatg 319  Q
    |||||    
T  33054959 aaatg 33054963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 14693195 - 14693262
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||| ||||||||||| |||||||| |||| || ||||||||||| |||||||||||  |||||||||    
T  14693195 actcgcagggcatcaagccctcaacataaagagcaaaagctcacaaggcatcaagcccccaacgtaaa 14693262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 25045022 - 25045096
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    ||||||| |||||||| ||| | | ||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  25045022 gcatcaagccctcaacgtaaga-gcaaaagctcacagggcatcaagccctcaacatcaaatgagtatgcatggact 25045096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 24815716 - 24815638
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| || ||||| |||  ||  ||||||||||||| |||||||| ||||| | ||||||||||||||||||    
T  24815716 cagggcatcaagccgtcaacgtaaggagccaaagctcacagggtatcaagccctcaacttgaatgagtatgcatggact 24815638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 25044975 - 25045041
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||| ||||||||||| ||||||||||||| || ||||  |||||| |||||||||| |||||||||    
T  25044975 actcacagggcatcaagccctcaacttaaagagcaaaatttcacagagcatcaagccctcaacgtaa 25045041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 319
Target Start/End: Complemental strand, 37670756 - 37670658
Alignment:
Q  221 gttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaatgaaatg 319  Q
    |||| ||||| ||||||||||||||| ||||| ||| |||||||| ||| |||  ||||||||||   |||| ||||| ||||| ||||| ||||||||    
T  37670756 gttgttcatagtattgctagagcatctttatcccaccctagcccccatattttttatgatgtaccgactactttgtaccctttaattatggatgaaatg 37670658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 3538812 - 3538857
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  3538812 gctcacagggcatcaagccctcaactttaatgagtatgcatggact 3538857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 6576217 - 6576258
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  6576217 acagggcatcaagccctcaacttaaatgagtatgcatggact 6576258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 18391315 - 18391270
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  18391315 gctcatagggcatcaagccctcaacttaaatgagtatgcatggact 18391270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 22689684 - 22689725
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  22689684 acagggcatcaagccctcaacttaaatgagtatgcatggact 22689725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 22694280 - 22694321
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  22694280 acagggcatcaagccctcaacttaaatgagtatgcatggact 22694321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 24436057 - 24436098
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||| ||||||||||| ||||||||||||||||||||    
T  24436057 acagggcattaagccttcaacttaaatgagtatgcatggact 24436098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 24781888 - 24781847
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  24781888 acagggcatcaagccctcaacataaatgagtatgcatggact 24781847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 27851626 - 27851671
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||||    
T  27851626 gctcacagggcatcaagccctcagcttaaatgagtatgcatggact 27851671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 27860341 - 27860386
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||||    
T  27860341 gctcacagggcatcaagccctcaacttaaatgagtatgcttggact 27860386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 34136849 - 34136889
Alignment:
Q  52 cagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  34136849 cagggcatcaagccctcaacttaaatgagtatgcatggact 34136889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 18389379 - 18389316
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacg 72  Q
    |||| ||||||||||| ||| ||||||||| || ||||| |||||||||||| |||| ||||||    
T  18389379 actcacagggcatcaagcccccaacttaaagagcaaaagatcacagggcatctagccctcaacg 18389316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 5032368 - 5032331
Alignment:
Q  55 ggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  5032368 ggcatcaagccctcaacttaaatgagtatgcatggact 5032331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 10748078 - 10748127
Alignment:
Q  215 aatagggttgctcatactattgctagagcatccttatctcactctagccc 264  Q
    ||||| |||||||||| |||||||||||||||  |||||||| |||||||    
T  10748078 aatagagttgctcataatattgctagagcatcactatctcaccctagccc 10748127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 24883466 - 24883507
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||    
T  24883466 acagggcatcaagccctcaacttaaattagtatgcatggact 24883507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 44071539 - 44071584
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||| || ||||| | ||||||||||||||||||    
T  44071539 gctcacagggcatcaaaccctcaactttaatgagtatgcatggact 44071584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 9974930 - 9974970
Alignment:
Q  52 cagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||| ||||| |||||| |||||||||||||    
T  9974930 cagggcatcaagccctcaacttaaatgggtatgcatggact 9974970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 14693241 - 14693317
Alignment:
Q  17 ggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||||| ||| |||| |||| || ||| | ||||||||||||||||| || || | |||||||||||||||||||    
T  14693241 ggcatcaagcccccaacgtaaagagcaaatgatcacagggcatcaagccctcgacttcaaatgagtatgcatggact 14693317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19201 - 19110
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||| ||| |||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  19201 ataaatacaatcctagggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacttaaatgagtatgcatggact 19110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 1e-27; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 27126537 - 27126446
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||||||| |||| |||||||| |||||||||||||||||||||||||| |||||  |||||||||||||||||||    
T  27126537 ataaatacacttccagggcatcaagccctgaacttaaagagaaaaagctcacagggcatcaagccctcaactcaaatgagtatgcatggact 27126446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7825558 - 7825631
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||||||| ||||||||| ||||||||    
T  7825558 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaagctcacaggacatcaagccctcaacgta 7825631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 7825638 - 7825729
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||| ||||||| | |||||| ||||||||||||| || || |||||| ||  ||||||||| ||||||||||||||||||||||||||    
T  7825638 ataaatatactcccatgacatcaagccctcaacttaaagagcaacagctcatagaacatcaagccctcaacgtaaatgagtatgcatggact 7825729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 17229905 - 17229827
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| || | || ||||||||||||||||||||||| ||||| |||||||||||| |||||||    
T  17229905 cagggcatcaagccctcaacgtatatagcaaaagctcacagggcatcaagccctcaacttaaatgagtatggatggact 17229827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17105553 - 17105642
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||| |||||||||| |||||||||||   || ||| |||| |||||||||||||| ||||| ||||||||||||||||||||    
T  17105553 ataaatacactcc-agggcatcaagccctcaacttattgagcaaaggctc-cagggcatcaagccctcaacttaaatgagtatgcatggact 17105642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 18260265 - 18260176
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||| |||||| |||| |||||||| ||| | | ||||||||||||||||||||||| ||||| | ||||||||||||||||||    
T  18260265 ataaatacactcacagggcgtcaagccctcaacgtaaga-gcaaaagctcacagggcatcaagccctcaac-ttaatgagtatgcatggact 18260176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 23528403 - 23528332
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacg 72  Q
    ||||||| |||| ||||||||||| |||||||| |||| || ||||||||||||||||||||||| ||||||    
T  23528403 ataaatatactcacagggcatcaagccctcaacctaaagagcaaaagctcacagggcatcaagccctcaacg 23528332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 20136540 - 20136618
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| || | |  ||||||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  20136540 cagggcatcaagccctcaacgtatagatcaaaagctaacagggcatcaagccctcaacttaaatgagtatgcatggact 20136618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 22196329 - 22196251
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| || | |  ||||||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  22196329 cagggcatcaagccctcaacgtatagatcaaaagctaacagggcatcaagccctcaacttaaatgagtatgcatggact 22196251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15895749 - 15895817
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaa 70  Q
    |||||||||||| |||||||||||||||||||| | || || ||||||||||||||||||||||| ||||    
T  15895749 ataaatacactcacagggcatcaaaccctcaacat-aagagcaaaagctcacagggcatcaagccctcaa 15895817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20136489 - 20136562
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||| ||| ||||||||||| |||||||| |||| || |||| |||||||||||||||||| ||||||||    
T  20136489 ataaataccctcacagggcatcaagccctcaacataaagagcaaaatctcacagggcatcaagccctcaacgta 20136562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22196380 - 22196307
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||| ||| ||||||||||| |||||||| |||| || |||| |||||||||||||||||| ||||||||    
T  22196380 ataaataccctcacagggcatcaagccctcaacataaagagcaaaatctcacagggcatcaagccctcaacgta 22196307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 31735954 - 31735874
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaa--gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||||||||||| || |||   |||||||||||||||| || ||||| ||||||||||||||||||||    
T  31735954 cagggcatcaagccctcaacttaaagagcaaataggctcacagggcatcaaaccctcaacttaaatgagtatgcatggact 31735874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 15895799 - 15895877
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||||| ||||  || ||| |||||| |||||||||||| ||||| | ||||||||||||||||||    
T  15895799 cagggcatcaagccctcaaattaaggagcaaaggctcacggggcatcaagccctcaacttgaatgagtatgcatggact 15895877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 22376934 - 22376857
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| |||  || ||| ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  22376934 cagggcatcaatccctcaacataagtagcaaaggctcacagggcatcaagccctcaac-tcaatgagtatgcatggact 22376857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 23083369 - 23083296
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| ||||||||||| |||||||| ||| | | |||||||||||||||||||| || |||||||||    
T  23083369 ataaatacactcacagggcatcaagccctcaacataaga-gcaaaagctcacagggcatcaacccctcaacgtaa 23083296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 23492354 - 23492265
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaa--gctcacagggcatcaagccttcaacgtaaatgagtatgcatg 88  Q
    ||||||| |||| ||||||||||| ||||||||||||| || |||   | ||||||||||||||||| ||||| | ||||||||||||||    
T  23492354 ataaatatactcacagggcatcaagccctcaacttaaagagtaaataggttcacagggcatcaagccctcaactttaatgagtatgcatg 23492265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 23497952 - 23497863
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaa--gctcacagggcatcaagccttcaacgtaaatgagtatgcatg 88  Q
    ||||||| |||| ||||||||||| ||||||||||||| || |||   | ||||||||||||||||| ||||| | ||||||||||||||    
T  23497952 ataaatatactcacagggcatcaagccctcaacttaaagagtaaataggttcacagggcatcaagccctcaactttaatgagtatgcatg 23497863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 23528352 - 23528278
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatg 88  Q
    ||||||||||| ||||||||    | ||||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  23528352 cagggcatcaagccctcaacgagtagagaaaaatctcacagggcatcaagccctcaacttaaatgagtatgcatg 23528278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22212599 - 22212526
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    ||||||||||||  |||||||||| ||||||||| ||| || ||| |||||| |||||||||||| ||||||||    
T  22212599 ataaatacactcatagggcatcaagccctcaactcaaagagcaaaggctcacggggcatcaagccctcaacgta 22212526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 16245159 - 16245226
Alignment:
Q  4 aatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacg 72  Q
    |||||||||  |||||||||| |||||||| ||| | | ||||||||||||||||||||||||||||||    
T  16245159 aatacactcatagggcatcaagccctcaacataaga-gcaaaagctcacagggcatcaagccttcaacg 16245226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18177972 - 18177908
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagcc 65  Q
    ||||||| |||| || |||||||| |||||||| |||| || |||||||||||||||||||||||    
T  18177972 ataaatatactcacaaggcatcaagccctcaacgtaaagagcaaaagctcacagggcatcaagcc 18177908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 18203980 - 18204028
Alignment:
Q  44 aaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  18203980 aaagctcacagggcatcaaaccctcaacataaatgagtatgcatggact 18204028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19656396 - 19656307
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||| ||| |||||| |||||||||||   || |||  ||| |||||||||||||| ||||| ||||||||||||||||||||    
T  19656396 ataaatacactccaagg-catcaagccctcaacttattgagcaaagtctc-cagggcatcaagccctcaacttaaatgagtatgcatggact 19656307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 23538527 - 23538616
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||| |||||||||| |||||||||||   || ||| |||| ||| |||||||||| ||||| || |||||||||||||||||    
T  23538527 ataaatacactcc-agggcatcaagccctcaacttattgagcaaaggctc-cagtgcatcaagccctcaacttatatgagtatgcatggact 23538616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 20411869 - 20411796
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| |||| |||||| |||||||| ||| | | |||||||||||| |||||||||| |||||||||    
T  20411869 ataaatacactcacaggacatcaagccctcaacataaga-gcaaaagctcacagagcatcaagccctcaacgtaa 20411796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22376984 - 22376915
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaac 71  Q
    |||||||||||| ||||||||||| |||||||| | || || |||||||||||||||||||| || |||||    
T  22376984 ataaatacactcacagggcatcaagccctcaacat-aagagcaaaagctcacagggcatcaatccctcaac 22376915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 23083319 - 23083242
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| |||  || ||| ||||||||||||| ||||| ||||| | ||||||||||||||||||    
T  23083319 cagggcatcaacccctcaacgtaaggagcaaaggctcacagggcattaagccctcaac-tcaatgagtatgcatggact 23083242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17229956 - 17229883
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    ||||||| ||||  ||||| |||| |||||||| |||| ||  |||||||||||||||||||||| ||||||||    
T  17229956 ataaatatactcatagggcttcaagccctcaacataaagagctaaagctcacagggcatcaagccctcaacgta 17229883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 17743061 - 17743149
Alignment:
Q  4 aatacactcccagggcatcaaaccctcaacttaaaa-agaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||| |||||| ||||||||| ||||||||||||   || ||| |||| |||||||||||||| ||||| |||||| |||||||||||||    
T  17743061 aatatactcccggggcatcaagccctcaacttaattgagcaaaggctc-cagggcatcaagccctcaacttaaatgggtatgcatggact 17743149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 18708504 - 18708545
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  18708504 acagggcatcaagccctcaacttaaatgagtatgcatggact 18708545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 23500659 - 23500739
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaa--gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||||||||| | || |||   ||||| ||||||||||||| ||||| | ||||||||||||||||||    
T  23500659 cagggcatcaagccctcaacttatagagcaaataggctcatagggcatcaagccctcaactttaatgagtatgcatggact 23500739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 346
Target Start/End: Complemental strand, 10159007 - 10158876
Alignment:
Q  215 aatagggttgctcatactattgctagagcatccttatctcactctagcccctata-ctttcaatgatgtaccatatactatgtactctttatttatgaat 313  Q
    ||||| |||||||||| |||||||||||||||  |||||||| |||||||| ||| ||||| || ||||| ||  |||| ||||  | ||| || | |||    
T  10159007 aatagagttgctcataatattgctagagcatcactatctcaccctagcccccatatctttc-atcatgtaacacctactttgtatccgttaatttttaat 10158909  T
Q  314 gaaatgcactaaatttgcttttgctcaacaaaa 346  Q
    |||||| ||||| ||||| ||||||||| ||||    
T  10158908 gaaatgaactaactttgcctttgctcaaaaaaa 10158876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 18177891 - 18177847
Alignment:
Q  44 aaagctcacagggcatcaagccttcaacgtaaatgagtatgcatg 88  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||    
T  18177891 aaagctcacagggcatcaaaccctcaacataaatgagtatgcatg 18177847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 18203915 - 18203963
Alignment:
Q  17 ggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagcc 65  Q
    |||||||| |||||||| |||| || |||||||||||||||||||||||    
T  18203915 ggcatcaagccctcaacgtaaagagcaaaagctcacagggcatcaagcc 18203963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 27573311 - 27573271
Alignment:
Q  52 cagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  27573311 cagggcatcaagccctcaacttaaatgagtatgcatggact 27573271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 20411815 - 20411741
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    ||||||| |||||||| ||| | | |||||||||||| |||||||||| ||||| | |||||||||||||||||||    
T  20411815 gcatcaagccctcaacgtaaga-gcaaaagctcacagagcatcaagccctcaacttcaaatgagtatgcatggact 20411741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 19830039 - 19829966
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    ||||||||| || ||| ||||||| |||||||| ||| | | |||||||||||| |||||||||| |||||||||    
T  19830039 ataaatacattcacagagcatcaagccctcaacataaga-gcaaaagctcacagagcatcaagccctcaacgtaa 19829966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 274
Target Start/End: Original strand, 17215366 - 17215427
Alignment:
Q  213 ttaatagggttgctcatactattgctagagcatccttatctcactctagcccctatactttc 274  Q
    |||||| |||||||||||  ||||| |||||||||||||| ||| ||| ||||||| |||||    
T  17215366 ttaataaggttgctcataacattgcaagagcatccttatcacaccctaacccctatgctttc 17215427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 22212514 - 22212469
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||| ||||||||||| ||||| ||||||||||||| ||||||    
T  22212514 gctcacatggcatcaagccctcaacttaaatgagtatgcgtggact 22212469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 22556237 - 22556282
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||| || ||||| | ||||||||||||||||||    
T  22556237 gctcacagggcatcaaaccctcaactttaatgagtatgcatggact 22556282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 23017134 - 23017097
Alignment:
Q  55 ggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  23017134 ggcatcaagccctcaacttaaatgagtatgcatggact 23017097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 27323666 - 27323625
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||| || ||||| ||||||||||||||||||||    
T  27323666 acagggcatcaaaccctcaacttaaatgagtatgcatggact 27323625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 15705866 - 15705795
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt 73  Q
    |||||||||||||||||||| ||| |||||||||||   || ||| |||| ||||||||||| || |||||||    
T  15705866 ataaatacactcccagggcaacaagccctcaacttattgagcaaaggctc-cagggcatcaatccctcaacgt 15705795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 33442956 - 33442996
Alignment:
Q  52 cagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||  |||| ||||||||||||||||||||    
T  33442956 cagggcatcaagcccccaacataaatgagtatgcatggact 33442996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold1662
Description:

Target: scaffold1662; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 481 - 390
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||  |||||||| |||||| ||||||||||||| || |||||||||||||||| |||||| |||||||||||||||||| |||||||    
T  481 ataaataagctcccaggacatcaagccctcaacttaaagagcaaaagctcacagggcaccaagccctcaacgtaaatgagtatgaatggact 390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 561 - 488
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||||||||||||||||||| ||||||||||||| || |||| |||||||||||||||||| ||||||||    
T  561 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaatctcacagggcatcaagccctcaacgta 488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 6e-23; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 20565378 - 20565453
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||||||||||| ||||||||||||||||||||||||| || |||||||||||| |||||||||| ||||||||||    
T  20565378 ataaatacactcacagggcatcaaaccctcaacttaaagagcaaaagctcacagagcatcaagccatcaacgtaaa 20565453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 10952944 - 10953010
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||| ||||||||||| ||||||||||||| || |||||||||||| |||||||||| |||||||||    
T  10952944 actcacagggcatcaagccctcaacttaaagagcaaaagctcacagagcatcaagccctcaacgtaa 10953010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 15796292 - 15796370
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||||    | || ||||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  15796292 cagggcatcaaaccctcaacgggtagagcaaaagctcacagggcatcaagccctaaacataaatgagtatgcatggact 15796370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 25742844 - 25742921
Alignment:
Q  15 agggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||| |||||||| |||| || ||  ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  25742844 agggcatcaagccctcaacgtaaagagcaatggctcacagggcatcaagccctcaacttgaatgagtatgcatggact 25742921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 214 - 346
Target Start/End: Complemental strand, 10813199 - 10813067
Alignment:
Q  214 taatagggttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaat 313  Q
    ||||||||||||||||| ||| |||||||| |||||||||||  |||||||| ||  |||  ||  |||||| |  ||| |||||||||| ||  |||||    
T  10813199 taatagggttgctcatagtatagctagagcttccttatctcatcctagcccccatcttttttatagtgtaccttcaactttgtactctttgttcttgaat 10813100  T
Q  314 gaaatgcactaaatttgcttttgctcaacaaaa 346  Q
    |||||||| ||| ||||| ||||||||| ||||    
T  10813099 gaaatgcattaattttgcctttgctcaaaaaaa 10813067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23202830 - 23202765
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaactta-aaaagaaaaagctcacagggcatcaagcc 65  Q
    |||||||||||||||||||||||| |||||||||||    || |||||||||||||||||||||||    
T  23202830 ataaatacactcccagggcatcaagccctcaacttatttgagcaaaagctcacagggcatcaagcc 23202765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 23469623 - 23469688
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaactta-aaaagaaaaagctcacagggcatcaagcc 65  Q
    |||||||||||||||||||||||| |||||||||||    || |||||||||||||||||||||||    
T  23469623 ataaatacactcccagggcatcaagccctcaacttatttgagcaaaagctcacagggcatcaagcc 23469688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 14026947 - 14026869
Alignment:
Q  17 ggcatcaaaccctcaacttaaaa-agaaaaa--gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||||| | || |||   ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  14026947 ggcatcaaaccctcaacttaatagagcaaataggctcacagggcatcaagccctcaactttaatgagtatgcatggact 14026869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 21406702 - 21406627
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    ||||||| |||||||| || | || ||||||||||| ||||||||||| ||||| | |||||||||||||||||||    
T  21406702 gcatcaagccctcaacgtatagagcaaaagctcacatggcatcaagccctcaacttcaaatgagtatgcatggact 21406627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 8504752 - 8504702
Alignment:
Q  42 aaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||| ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  8504752 aaaaggctcacagggcatcaagccctcaactttaatgagtatgcatggact 8504702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 25742790 - 25742867
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaag--aaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    ||||||| |||| ||||||||||| ||||||||||||| ||  || | ||||| ||||||||||||| ||||||||||    
T  25742790 ataaatatactcacagggcatcaagccctcaacttaaagagcaaataggctcatagggcatcaagccctcaacgtaaa 25742867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 25743593 - 25743671
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||||||    | || |||| |||| ||||||||||||| ||||| ||||||||||||||||||||    
T  25743593 cagggcatcaagccctcaacgggtagagtaaaaactcatagggcatcaagccctcaacttaaatgagtatgcatggact 25743671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 319
Target Start/End: Complemental strand, 33495145 - 33495063
Alignment:
Q  237 ctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaatgaaatg 319  Q
    |||||||||  |||||||| ||||| ||||| | ||||||| || |||||| | || |||||||||| |||||||||||||||    
T  33495145 ctagagcatttttatctcattctagtccctacattttcaattatttaccatcttctttgtactctttgtttatgaatgaaatg 33495063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 25250896 - 25250851
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||| ||||| || |||||||||||||||||    
T  25250896 gctcacagggcatcaagccctcaacttatatgagtatgcatggact 25250851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 25314681 - 25314636
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||| ||||| || |||||||||||||||||    
T  25314681 gctcacagggcatcaagccctcaacttatatgagtatgcatggact 25314636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 29914339 - 29914384
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  29914339 gctcacagggcatcaagccctcaactttaatgagtatgcatggact 29914384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 20470129 - 20470085
Alignment:
Q  48 ctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||||    
T  20470129 ctcatagggcatcaagccctcaacttaaatgagtatgcatggact 20470085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 25250977 - 25250910
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaa--gctcacagggcatcaagccttcaacgta 74  Q
    |||| |||||||||||||||||||||| || || |||   ||||||||||||||||||| ||||||||    
T  25250977 actcacagggcatcaaaccctcaacttgaagagcaaataggctcacagggcatcaagccctcaacgta 25250910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 25314762 - 25314695
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaa--gctcacagggcatcaagccttcaacgta 74  Q
    |||| |||||||||||||||||||||| || || |||   ||||||||||||||||||| ||||||||    
T  25314762 actcacagggcatcaaaccctcaacttgaagagcaaataggctcacagggcatcaagccctcaacgta 25314695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25574765 - 25574729
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaa 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  25574765 ataaatacactcccagggcatcaagccctcaacttaa 25574729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25575958 - 25575922
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaa 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  25575958 ataaatacactcccagggcatcaagccctcaacttaa 25575922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 20565433 - 20565508
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaac-gtaaatgagtatgcatggact 92  Q
    ||||||| || ||||| |||| || |||||||||||| ||||||| || |||||  ||||||||||||||||||||    
T  20565433 gcatcaagccatcaacgtaaagagcaaaagctcacagagcatcaaaccctcaactttaaatgagtatgcatggact 20565508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 21406749 - 21406684
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||| ||| ||||||| ||||||||||||| |  ||||| |||||| |||||||||| ||||||||    
T  21406749 actcacagagcatcaagccctcaacttaaagaacaaaaggtcacagagcatcaagccctcaacgta 21406684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 31454932 - 31454969
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatg 88  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  31454932 acagggcatcaagccctcaacttaaatgagtatgcatg 31454969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 31455545 - 31455582
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatg 88  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  31455545 acagggcatcaagccctcaacttaaatgagtatgcatg 31455582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25578331 - 25578295
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaa 37  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  25578331 ataaatacactcctagggcatcaagccctcaacttaa 25578295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 53; Significance: 4e-21; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 63381 - 63309
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt 73  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||| |||||||    
T  63381 ataaatacactcccagggcatcaagccctcaacttaaagagcaaaaggtcacagggcatcaagccctcaacgt 63309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 63264 - 63192
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt 73  Q
    |||||||| ||||||||  ||||| ||||||||||||| || ||||||||||| | ||||||||  |||||||    
T  63264 ataaatacgctcccaggaaatcaagccctcaacttaaagagcaaaagctcacatgacatcaagctctcaacgt 63192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 63173 - 63136
Alignment:
Q  55 ggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  63173 ggcatcaagccctcaacttaaatgagtatgcatggact 63136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15277 - 15352
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||||||||||| ||||||||||| ||||||||||| | || |||||||||||||||||||||||| |||||||||    
T  15277 ataaatacactcacagggcatcaagccctcaacttagagagcaaaagctcacagggcatcaagcctccaacgtaaa 15352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 15328 - 15406
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||  |||| |||| || ||||||||||||||||| |||||  |||| | ||||||||||||||||||    
T  15328 cagggcatcaagcctccaacgtaaagagcaaaagctcacagggcatgaagcccccaacatgaatgagtatgcatggact 15406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 56733 - 56824
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||| ||||||||||| ||||||||||||| || |||||||||||||||| ||||||  |||| | ||||||| ||||||||||    
T  56733 ataaatacactcacagggcatcaagccctcaacttaaagagcaaaagctcacagggcaacaagcccccaacatgaatgagtctgcatggact 56824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 24178 - 24256
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| |||| || ||| ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  24178 cagggcatcaagccctcaacgtaaagagcaaaggctcacagggcatcaagccctcaacttaaatgagtatgcatggact 24256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 24140 - 24202
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    ||||||||||  ||||||||||||  || ||| ||||||||||||||||||| ||||||||||    
T  24140 cagggcatcaggccctcaacttaaggagcaaaggctcacagggcatcaagccctcaacgtaaa 24202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0996 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 319
Target Start/End: Complemental strand, 1602 - 1497
Alignment:
Q  214 taatagggttgctcatactattgctagagcatccttatctcactctagcccctatactttcaatgatgtaccatatactatgtactctttatttatgaat 313  Q
    ||||||||||||||||| |||||||||||| ||||||| |||  |||||||| ||| ||| |||| |||||| | |||| ||||||| ||| ||||||||    
T  1602 taatagggttgctcatagtattgctagagcttccttatgtcatcctagcccccatatttttaatgttgtaccttctactttgtactccttaattatgaat 1503  T
Q  314 gaaatg 319  Q
    ||||||    
T  1502 gaaatg 1497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 47; Significance: 1e-17; HSPs: 4)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 2881 - 2943
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  2881 cagggcatcaagccctcaacttaaagagcaaaagctcacagggcatcaagccctcaacgtaaa 2943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 2919 - 2998
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| |||| || ||||||||| ||| ||||||||| ||||| | |||||||||||||||||||    
T  2919 cagggcatcaagccctcaacgtaaagagcaaaagctcataggacatcaagccctcaacttcaaatgagtatgcatggact 2998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 14093 - 14167
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    ||||||| |||||||| ||| | | ||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  14093 gcatcaagccctcaacgtaaga-gcaaaagctcacagggcatcaagccctcaacttcaaatgagtatgcatggact 14167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 14039 - 14112
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    ||||||||||||  |||||||||| |||||||| ||| | | |||||||||||| |||||||||| |||||||||    
T  14039 ataaatacactcatagggcatcaagccctcaacataaga-gcaaaagctcacagagcatcaagccctcaacgtaa 14112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 7321 - 7382
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaa 70  Q
    |||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  7321 actcacagggcatcaaaccctcaacttaaagagtaaaagctcacagggcatcaagccctcaa 7382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 397465 - 397530
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||| ||||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||||||    
T  397465 actcacagggcatcaagccctcaacttaaagagaaaaagctcacagggcatcaaaccctcaacgta 397530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 397508 - 397587
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||||||||||||||||| || | || |||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  397508 cagggcatcaaaccctcaacgtatagagcaaaagctcacagggcatcaaaccctcaacttcaaatgagtatgcatggact 397587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7372 - 7436
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagcc 65  Q
    |||||||||||| ||||||||||| ||| ||||||||| || |||||||||||||||||||||||    
T  7372 ataaatacactcacagggcatcaagcccccaacttaaagagcaaaagctcacagggcatcaagcc 7436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 7423 - 7501
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||| |||  |||| || |||||||||||||||||||||||  |||| | ||||||||||||||||||    
T  7423 cagggcatcaagcccccaatgtaaagagcaaaagctcacagggcatcaagcccccaacatgaatgagtatgcatggact 7501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19694 - 19603
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||||||||| ||||||||||| |||||||| | || || |||||||||||| |||||||||| ||||| | |||||||||||||||||||    
T  19694 ataaatacactcacagggcatcaagccctcaacgt-aagagcaaaagctcacagagcatcaagccctcaacttcaaatgagtatgcatggact 19603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 53679 - 53595
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||| |||||||||||||||||||| |||| || |||||| ||||||||||||| || ||||| | |||||||||||||||||||    
T  53679 actcacagggcatcaaaccctcaacataaagagcaaaagcacacagggcatcaaaccctcaacttcaaatgagtatgcatggact 53595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 54834 - 54907
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| ||||||||||| |||||||| | || || ||||||||||||  ||||||||| |||||||||    
T  54834 ataaatacactcacagggcatcaagccctcaacat-aagagcaaaagctcacagaacatcaagccctcaacgtaa 54907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 54912 - 54962
Alignment:
Q  43 aaaagctcacagggcatcaagccttcaac-gtaaatgagtatgcatggact 92  Q
    |||||||||||| |||||||||| |||||  ||||||||||||||||||||    
T  54912 aaaagctcacagagcatcaagccctcaactttaaatgagtatgcatggact 54962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 166760 - 166685
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||||||||||| |||||||||||||| |||||||||| || |||||| || |||||||||||||  |||||||||    
T  166760 ataaatacactcacagggcatcaaaccttcaacttaaagagcaaaagcgcatagggcatcaagcccccaacgtaaa 166685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 17424 - 17502
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||||||| | ||||| ||| ||||| ||||||||||||| ||||| || | |||||||||||||||    
T  17424 cagggcatcaaaccctcaacgtgaaaagcaaaggctcatagggcatcaagccctcaacatataggagtatgcatggact 17502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 2488 - 2561
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| |||||||||||||||||||| | || || |||||||||||| |||||||||| |||||||||    
T  2488 ataaatacactcacagggcatcaaaccctcaacat-aagagcaaaagctcacagagcatcaagccatcaacgtaa 2561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 76079 - 76001
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||| || |||||||| || | || ||||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  76079 cagggcattaagccctcaacgtatagagcaaaagctcacagggcatcaagccctcaacttaaatcagtatgcatggact 76001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 76130 - 76057
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    ||||||||||||  |||||||||| |||||||| |||| || ||||||||||||||||| ||||| ||||||||    
T  76130 ataaatacactcatagggcatcaagccctcaacataaagagcaaaagctcacagggcattaagccctcaacgta 76057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 65990 - 65945
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||| |||||||||| ||||| | ||||||||||||||||||    
T  65990 gctcacagagcatcaagccctcaactttaatgagtatgcatggact 65945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25908 - 25846
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaag 63  Q
    ||||||||||||||||||||||||  |||||||||||| || |||| ||||||||||||||||    
T  25908 ataaatacactcccagggcatcaagacctcaacttaaagagcaaaaactcacagggcatcaag 25846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 25811 - 25775
Alignment:
Q  56 gcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||| ||||||||||||||||||||||||||    
T  25811 gcatcaagccctcaacgtaaatgagtatgcatggact 25775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1167 - 1240
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||||||| ||||||||||| |||||||| |||| ||  |||||||||| ||||||||||| ||||||||    
T  1167 ataaatacactcacagggcatcaatccctcaacataaagagctaaagctcacaaggcatcaagccctcaacgta 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9027 - 9100
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||||||||||| ||||||||||| |||||||| |||| ||  |||||||||| ||||||||||| ||||||||    
T  9027 ataaatacactcacagggcatcaatccctcaacataaagagctaaagctcacaaggcatcaagccctcaacgta 9100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 11210 - 11260
Alignment:
Q  42 aaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||| ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  11210 aaaaggctcacagggcatcaagccctcaacatgaatgagtatgcatggact 11260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 1375 - 1440
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    |||| ||||||||||| ||||||||||||| ||||||| ||||||| |||||||||| ||||||||    
T  1375 actcacagggcatcaagccctcaacttaaagagaaaaatctcacagagcatcaagccctcaacgta 1440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 4585 - 4664
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| || | || ||| |||||||| |||||||||| ||||| | |||||||||||||||||||    
T  4585 cagggcatcaagccctcaacatatagagcaaaggctcacagagcatcaagccctcaacttgaaatgagtatgcatggact 4664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 36000 - 36073
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaa-agaaaaagctcacagggcatcaagccttcaacgt 73  Q
    |||||||||||||||||| ||||| |||||||||||    |||||||||||||||||||||||||| |||||||    
T  36000 ataaatacactcccagggaatcaagccctcaacttatttgagaaaaagctcacagggcatcaagccctcaacgt 36073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 92
Target Start/End: Original strand, 36090 - 36129
Alignment:
Q  53 agggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  36090 agggcatcaagccctcaacttaaatgagtatgcatggact 36129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 127511 - 127439
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaa--aagctcacagggcatcaagccttcaac 71  Q
    ||||||| |||| ||||||||||| ||||||||||||| |||||  ||||||||||||||||||||| |||||    
T  127511 ataaatatactcgcagggcatcaagccctcaacttaaagagaaaataagctcacagggcatcaagccctcaac 127439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 556 - 596
Alignment:
Q  52 cagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  556 cagggcatcaagccctcaacttaaatgagtatgcatggact 596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 127422 - 127377
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||| |||||||| || || ||||||||||||||||||||    
T  127422 gctcacagggaatcaagccatctacttaaatgagtatgcatggact 127377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 11899 - 11823
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaa-aagaaa-aagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| ||||||||||| ||||||||||||| || ||| | ||||||||||||||||||| |||||||||    
T  11899 ataaatacactcacagggcatcaagccctcaacttaaagaacaaataggctcacagggcatcaagccctcaacgtaa 11823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 11846 - 11768
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||| |||  || |||  |||||||||||||||||| ||||| |||||||||||| |||||||    
T  11846 cagggcatcaagccctcaacgtaaggagcaaagactcacagggcatcaagccctcaacttaaatgagtatgtatggact 11768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 1078 - 1011
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaa--aagctcacagggcatcaagccttcaacgta 74  Q
    |||| ||||||||||||||||||||||||| |||||  ||||||| ||||||||||||| ||||||||    
T  1078 actcgcagggcatcaaaccctcaacttaaagagaaaataagctcatagggcatcaagccctcaacgta 1011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 1032 - 954
Alignment:
Q  15 agggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||||||| |||||||| || | || |||||||||| |||||||||| | ||||| | |||||||||||||||||||    
T  1032 agggcatcaagccctcaacgtatatagcaaaagctcacggggcatcaagtcctcaacttcaaatgagtatgcatggact 954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 7727 - 7667
Alignment:
Q  15 agggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||| | ||||||||||||| || ||||||||||||||||||||||| |||||||||    
T  7727 agggcatcgagccctcaacttaaagagcaaaagctcacagggcatcaagccgtcaacgtaa 7667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 7690 - 7612
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| || ||||| |||  ||  ||||||||||||| |||||||| ||||| | ||||||||||||||||||    
T  7690 cagggcatcaagccgtcaacgtaaggagccaaagctcacagggtatcaagccctcaacttgaatgagtatgcatggact 7612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 5935 - 5982
Alignment:
Q  43 aaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatgga 90  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  5935 aaaagctcacagggcatcaagccctcaacttaaatgagtatgcatgga 5982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 5869 - 5926
Alignment:
Q  15 agggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacg 72  Q
    |||||||||| |||||||| |||| || ||||||||||| | ||||||||| ||||||    
T  5869 agggcatcaagccctcaacataaagagcaaaagctcacatgacatcaagccctcaacg 5926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8059 - 8134
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    |||||||||||| ||| ||||||| || |||||||||| || |||||||||||| |||| ||||| ||||||||||    
T  8059 ataaatacactcacagagcatcaagccatcaacttaaagagcaaaagctcacagagcattaagccctcaacgtaaa 8134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 4876 - 4806
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacg 72  Q
    |||||||||||| ||||||||||| |||||||| ||| | | ||||||||||||||||||||||| ||||||    
T  4876 ataaatacactcacagggcatcaagccctcaacataaga-gcaaaagctcacagggcatcaagccctcaacg 4806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 4826 - 4748
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||||||  ||  || ||| ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  4826 cagggcatcaagccctcaacgcaatgagcaaaggctcacagggcatcaagccctcaacttgaatgagtatgcatggact 4748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 14884 - 14797
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatgg 89  Q
    ||||||||||||  ||||| |||| |||||||| ||| | | ||| ||||||||||||||||||  ||||| | |||||||||||||||    
T  14884 ataaatacactcttagggcctcaagccctcaacataaga-gcaaacgctcacagggcatcaagcactcaacttgaatgagtatgcatgg 14797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 28292 - 28371
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaac-gtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||  |||| || ||| ||||||||||||||||||| |||||  ||||||||||||||||||||    
T  28292 cagggcatcaagccctcaatgtaaagagcaaaggctcacagggcatcaagccctcaactttaaatgagtatgcatggact 28371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 47608 - 47522
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaagaaaa--agctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||| ||| ||||||| ||||||||||||| ||||||   |||||||||||||||| || ||||| | |||||||||||||||||||    
T  47608 actcacagagcatcaagccctcaacttaaagagaaaatgtgctcacagggcatcaatccctcaacttcaaatgagtatgcatggact 47522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 28253 - 28316
Alignment:
Q  15 agggcatcaaaccctcaacttaaaaagaaa--aagctcacagggcatcaagccttcaacgtaaa 76  Q
    ||||||||||||||||||||| || |||||  | ||||||||||||||||||| |||| |||||    
T  28253 agggcatcaaaccctcaacttgaagagaaaataggctcacagggcatcaagccctcaatgtaaa 28316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 3275 - 3360
Alignment:
Q  9 actcccagggcatcaaaccctcaacttaaaaag--aaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||| ||||||||||| ||||||||||||| ||  || | ||||||||||||||||||| ||||| || |||||||||||| ||||    
T  3275 actcgcagggcatcaagccctcaacttaaagagcgaataggctcacagggcatcaagccctcaacatatatgagtatgcatagact 3360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 13205 - 13132
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| ||||||||||| |||||||| | || ||||||| |||||||||| ||||||| |||||||||    
T  13205 ataaatacactcacagggcatcaagccctcaacat-aagagaaaaatctcacagggcgtcaagccctcaacgtaa 13132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 13155 - 13078
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||| |||| |||||||| |||  || ||||||||||||||||||||||  ||||| | ||||||||||||||||||    
T  13155 cagggcgtcaagccctcaacgtaaggagcaaaagctcacagggcatcaagctctcaac-tcaatgagtatgcatggact 13078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 9169 - 9096
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| ||||||||||| |||||||| ||| | | |||||||||||| |||||||||| |||||||||    
T  9169 ataaatacactcacagggcatcaagccctcaacataaga-gcaaaagctcacagagcatcaagccctcaacgtaa 9096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 986 - 896
Alignment:
Q  3 aaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaac-gtaaatgagtatgcatggact 92  Q
    |||||| ||| ||||||||||| |||||||| |||| || ||| ||||||| ||||||||||| |||||  || |||||||||||||||||    
T  986 aaatacgctcacagggcatcaagccctcaacgtaaagagcaaaggctcacaaggcatcaagccctcaactttagatgagtatgcatggact 896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 6290 - 6200
Alignment:
Q  3 aaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaac-gtaaatgagtatgcatggact 92  Q
    |||||| ||| ||||||||||| |||||||| |||| || ||| ||||||| ||||||||||| |||||  || |||||||||||||||||    
T  6290 aaatacgctcacagggcatcaagccctcaacgtaaagagcaaaggctcacaaggcatcaagccctcaactttagatgagtatgcatggact 6200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 60234 - 60296
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    ||||||||||| |||||||| |||| |||||| ||||||||||||||||| | ||||||||||    
T  60234 cagggcatcaagccctcaacgtaaagagaaaaggctcacagggcatcaagtcctcaacgtaaa 60296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 60272 - 60350
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||  ||||||| |||| || ||| ||||||| ||||||||||| ||||| || |||||||||||||||||    
T  60272 cagggcatcaagtcctcaacgtaaagagcaaaggctcacatggcatcaagccctcaacttatatgagtatgcatggact 60350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 60198 - 60258
Alignment:
Q  17 ggcatcaaaccctcaacttaaaaagaaaaag-ctcacagggcatcaagccttcaacgtaaa 76  Q
    |||||||| |||||||||||| |  ||| || |||||||||||||||||| ||||||||||    
T  60198 ggcatcaagccctcaacttaagagcaaataggctcacagggcatcaagccctcaacgtaaa 60258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 10987 - 10914
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| |||||||||||||||||||| | || || |||||||||||| ||||||| || |||||||||    
T  10987 ataaatacactcacagggcatcaaaccctcaacat-aagagcaaaagctcacagagcatcaaaccctcaacgtaa 10914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 10933 - 10859
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    |||||||||||||||| ||| | | |||||||||||| |||||||||| ||||| | |||||||||||||||||||    
T  10933 gcatcaaaccctcaacgtaaga-gcaaaagctcacagagcatcaagccctcaacttcaaatgagtatgcatggact 10859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 109171 - 109264
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaa--gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||| |||| ||||||||||| ||| | ||||| | || |||   ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  109171 ataaatatactcacagggcatcaagccccctacttatagagcaaataggctcacagggcatcaagccctcaacttaaatgagtatgcatggact 109264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 21059 - 20980
Alignment:
Q  16 gggcatcaaaccctcaacttaaaaag---aaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||| ||||||||||| | ||   |||| ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  21059 gggcatcaagccctcaacttatagagcataaaaggctcacagggcatcaagccctcaactttaatgagtatgcatggact 20980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 524 - 598
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt-aaatgagtatgcatggact 92  Q
    ||||||| |||||||| ||| | | ||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  524 gcatcaagccctcaacgtaaga-gcaaaagctcacagggcatcaagccctcaacttcaaatgagtatgcatggact 598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 847 - 887
Alignment:
Q  52 cagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||  |||| ||||||||||||||||||||    
T  847 cagggcatcaagcccccaacttaaatgagtatgcatggact 887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 20613 - 20686
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| ||||||||| | |||||||| ||| || |||| |||||||| |||||||||| |||||||||    
T  20613 ataaatacactcacagggcatccagccctcaacataagaacaaaa-gctcacagagcatcaagccctcaacgtaa 20686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 39079 - 39152
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||||||||| ||||||||||| |||||||| | || || ||||||||| || |||||||||| |||||||||    
T  39079 ataaatacactcacagggcatcaagccctcaacat-aagagcaaaagctcatagagcatcaagccctcaacgtaa 39152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 39133 - 39207
Alignment:
Q  18 gcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaac-gtaaatgagtatgcatggact 92  Q
    ||||||| |||||||| ||| | | ||||||||||| ||||||||||| |||||  ||||||||||||||||||||    
T  39133 gcatcaagccctcaacgtaaga-gcaaaagctcacatggcatcaagccctcaactttaaatgagtatgcatggact 39207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 34332 - 34377
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||||||||| | ||||| ||||||||||||    
T  34332 gctcacagggcatcaagccttcaactttaatgactatgcatggact 34377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 34; Significance: 0.0000000008; HSPs: 3)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 7923 - 7878
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||    
T  7923 gctcacagggcatcaagccctcaactttaatgagtatgcatggact 7878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 3161 - 3206
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||| |||||||||||||| ||||| ||||||||||||| ||||||    
T  3161 gctcccagggcatcaagccgtcaacttaaatgagtatgcttggact 3206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 5343 - 5410
Alignment:
Q  7 acactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaa 75  Q
    |||||| ||||||||||| |||||||| ||| | | |||||||||||| |||||||||| | |||||||    
T  5343 acactcacagggcatcaagccctcaacataaga-gcaaaagctcacagagcatcaagccctaaacgtaa 5410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 66068 - 66113
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  66068 gctcacatggcatcaagccctcaacttaaatgagtatgcatggact 66113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 113695 - 113615
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaa--gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||||||||| | | || |||   ||||| |||||||||||||  |||| ||||||||||||||||||||    
T  113695 cagggcatcaaaccctcaactcatagagcaaataggctcaaagggcatcaagcccccaacttaaatgagtatgcatggact 113615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 78358 - 78317
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| ||||||||||||||||||||    
T  78358 acagggcatcaagccctcaacttaaatgagtatgcatggact 78317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 873 - 933
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgta 74  Q
    ||||||||||| ||||||||||||| || |||  |||||| ||||||||||| ||||||||    
T  873 cagggcatcaagccctcaacttaaagagcaaagactcacaaggcatcaagccctcaacgta 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 1680 - 1759
Alignment:
Q  15 agggcatcaaaccctcaacttaaaaagaaaaa--gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||| ||||||| | || |||   ||||||||||||||||| | ||||| | ||||||||||||||||||    
T  1680 agggcatcaaacccccaacttatagagcaaataggctcacagggcatcaagtcctcaactttaatgagtatgcatggact 1759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 3725 - 3770
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||||| || ||||| | ||||||||||||||||||    
T  3725 gctcacagggcatcaaaccctcaactttaatgagtatgcatggact 3770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 4568 - 4631
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagcc 65  Q
    |||||||||||||||||||||||| |||||||||||   || ||| |||| ||||||||||||||    
T  4568 ataaatacactcccagggcatcaagccctcaacttattgagtaaaggctc-cagggcatcaagcc 4631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 15501 - 15461
Alignment:
Q  52 cagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  15501 cagggcatcaagccctcaacttaaatgagtatgcatggact 15461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 142439 - 142530
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaa-agaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||| ||||||| |||||||| |||||||||||    || ||| |||| ||||||||||||||  |||| ||||||||||||||||||||    
T  142439 ataaatatactcccaaggcatcaagccctcaacttatttgagcaaaggctc-cagggcatcaagcccccaacttaaatgagtatgcatggact 142530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 38415 - 38324
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaa-aaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||| |||||||||||||||| ||||||||||||   || | | |||| ||||||||||||||  |||| | ||||||||||||||||||    
T  38415 ataaatatactcccagggcatcaagccctcaacttaattgagcataggctc-cagggcatcaagcccccaactttaatgagtatgcatggact 38324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 125642 - 125716
Alignment:
Q  17 ggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||| |||||||||||   || ||| |||| ||||||||||||||  |||| ||||||||||||||||||||    
T  125642 ggcatcaagccctcaacttattgagcaaaggctc-cagggcatcaagcccccaacttaaatgagtatgcatggact 125716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 2970 - 2893
Alignment:
Q  17 ggcatcaaaccctcaacttaaaaagaaaaa--gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||| ||||||||||||| || |||   ||||||| ||||||||||| ||||| | ||||||||| ||||||||    
T  2970 ggcatcaagccctcaacttaaagagcaaataggctcacatggcatcaagccctcaactttaatgagtatacatggact 2893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 3026 - 2949
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaag--aaaaagctcacagggcatcaagccttcaacgtaaa 76  Q
    ||||||| |||| ||||||||||| ||||||||||||| ||  || | ||||||| ||||||||||| ||||| ||||    
T  3026 ataaatatactcacagggcatcaagccctcaacttaaagagcaaataggctcacatggcatcaagccctcaacttaaa 2949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 18092 - 18173
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaa-agaaaaa--gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| |||||||||||| | || |||   ||||||||||||||||||| ||||  | ||||||||||||||||||    
T  18092 cagggcatcaatccctcaacttaatagagcaaataggctcacagggcatcaagccctcaagtttaatgagtatgcatggact 18173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 6675 - 6638
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatg 88  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  6675 acagggcatcaagccctcaacttaaatgagtatgcatg 6638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 2884 - 2843
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||||| || ||||| ||||||||||||||||||||    
T  2884 acagggcatcaaaccctcaacttaaatgagtatgcatggact 2843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 9346 - 9309
Alignment:
Q  55 ggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  9346 ggcatcaagccctcaacttaaatgagtatgcatggact 9309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 16656 - 16697
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| ||||| || |||||||||||||||||    
T  16656 acagggcatcaagccctcaacttatatgagtatgcatggact 16697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 57804 - 57845
Alignment:
Q  51 acagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||||||||||| | ||| ||||||||||||||||||||    
T  57804 acagggcatcaagcccttaacttaaatgagtatgcatggact 57845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 221423 - 221378
Alignment:
Q  47 gctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||| |||||||||||||| ||||| |||||||| |||||||||||    
T  221423 gctcccagggcatcaagccctcaacttaaatgagcatgcatggact 221378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1671 - 1601
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgt 73  Q
    ||||||||||||| |||||||||| |||||||||||   || ||| |||| |||||||||||||| |||||||    
T  1671 ataaatacactcc-agggcatcaagccctcaacttattgagcaaaggctc-cagggcatcaagccctcaacgt 1601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17324 - 17360
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaa 37  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  17324 ataaattcactcccagggcatcaagccctcaacttaa 17360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 18375 - 18339
Alignment:
Q  56 gcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  18375 gcatcaagccctcaacttaaatgagtatgcatggact 18339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 446357 - 446432
Alignment:
Q  14 cagggcatcaaaccctcaacttaaaaagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatgga 90  Q
    ||||||||||| |||| ||| |||  || ||| ||||| ||||||||||||| ||||| | ||||||||||||||||    
T  446357 cagggcatcaagccctaaacgtaaggagcaaaggctcatagggcatcaagccctcaac-tcaatgagtatgcatgga 446432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 497283 - 497374
Alignment:
Q  1 ataaatacactcccagggcatcaaaccctcaacttaaa-aagaaaaagctcacagggcatcaagccttcaacgtaaatgagtatgcatggact 92  Q
    ||||||| ||||||| |||||||| ||| ||||||||  ||| ||| |||| || |||||||||||  |||| | ||||||||||||||||||    
T  497283 ataaatatactcccacggcatcaagcccccaacttaattaagcaaaggctc-caaggcatcaagcccccaactttaatgagtatgcatggact 497374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 842 times since January 2019
Visitors: 2240