View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0172_high_13 (Length: 226)

Name: NF0172_high_13
Description: NF0172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0172_high_13
NF0172_high_13
[»] chr5 (40 HSPs)
chr5 (1-110)||(12352827-12352936)
chr5 (1-111)||(23881063-23881173)
chr5 (1-106)||(6499235-6499340)
chr5 (1-111)||(9398765-9398875)
chr5 (1-113)||(21099733-21099845)
chr5 (13-110)||(642739-642836)
chr5 (1-92)||(21910552-21910643)
chr5 (1-89)||(23413027-23413115)
chr5 (1-110)||(21199035-21199144)
chr5 (1-89)||(17814964-17815052)
chr5 (1-89)||(21072293-21072381)
chr5 (1-89)||(89475-89563)
chr5 (1-89)||(19536354-19536442)
chr5 (1-68)||(6512502-6512569)
chr5 (1-92)||(7745743-7745834)
chr5 (1-92)||(41566484-41566575)
chr5 (1-92)||(20550891-20550981)
chr5 (4-85)||(26784353-26784434)
chr5 (1-92)||(33022660-33022751)
chr5 (1-92)||(4887018-4887109)
chr5 (13-92)||(13545562-13545641)
chr5 (1-92)||(29138456-29138547)
chr5 (1-93)||(28464388-28464480)
chr5 (1-68)||(9088965-9089032)
chr5 (1-92)||(25930206-25930297)
chr5 (1-92)||(31117873-31117964)
chr5 (1-93)||(3245490-3245582)
chr5 (1-89)||(11993884-11993972)
chr5 (8-68)||(30742983-30743043)
chr5 (1-68)||(14086613-14086680)
chr5 (1-68)||(30115911-30115978)
chr5 (8-109)||(25096856-25096960)
chr5 (8-109)||(25154826-25154930)
chr5 (1-47)||(28139603-28139649)
chr5 (1-93)||(10848769-10848861)
chr5 (8-68)||(42243683-42243743)
chr5 (1-68)||(33933263-33933330)
chr5 (2-68)||(11208060-11208125)
chr5 (8-92)||(15516972-15517056)
chr5 (1-89)||(35932059-35932147)
[»] chr4 (47 HSPs)
chr4 (1-111)||(40846093-40846203)
chr4 (1-92)||(37985638-37985729)
chr4 (1-89)||(55380284-55380372)
chr4 (1-92)||(9140906-9140997)
chr4 (5-92)||(12601099-12601186)
chr4 (1-89)||(3395584-3395672)
chr4 (1-92)||(12811204-12811292)
chr4 (8-89)||(45833395-45833476)
chr4 (1-89)||(19621090-19621178)
chr4 (1-89)||(19666366-19666454)
chr4 (1-106)||(23750516-23750619)
chr4 (1-89)||(29680573-29680661)
chr4 (2-89)||(14604936-14605023)
chr4 (1-92)||(16632434-16632525)
chr4 (1-92)||(19884696-19884787)
chr4 (1-110)||(6641678-6641787)
chr4 (8-92)||(22675546-22675630)
chr4 (1-92)||(10072929-10073020)
chr4 (1-92)||(29121364-29121455)
chr4 (1-88)||(14904386-14904473)
chr4 (1-92)||(37435561-37435652)
chr4 (63-111)||(15139283-15139331)
chr4 (1-93)||(17398699-17398791)
chr4 (1-68)||(6517479-6517546)
chr4 (1-92)||(10692845-10692936)
chr4 (1-92)||(10906611-10906702)
chr4 (13-111)||(17788053-17788152)
chr4 (5-68)||(19911931-19911994)
chr4 (1-89)||(16853497-16853585)
chr4 (8-92)||(54679931-54680015)
chr4 (13-68)||(413008-413063)
chr4 (1-68)||(3105469-3105536)
chr4 (1-92)||(56034568-56034659)
chr4 (13-50)||(8685511-8685548)
chr4 (8-61)||(17247245-17247298)
chr4 (1-66)||(20977451-20977516)
chr4 (13-106)||(41114782-41114875)
chr4 (8-68)||(8105638-8105698)
chr4 (1-89)||(40860661-40860749)
chr4 (8-68)||(56533112-56533172)
chr4 (25-92)||(3483739-3483806)
chr4 (8-111)||(11915701-11915804)
chr4 (1-92)||(13576140-13576231)
chr4 (8-67)||(17540396-17540455)
chr4 (1-68)||(22190840-22190907)
chr4 (1-68)||(38513872-38513939)
chr4 (17-66)||(16940026-16940075)
[»] chr2 (57 HSPs)
chr2 (1-110)||(39037639-39037748)
chr2 (1-109)||(22454988-22455096)
chr2 (1-111)||(25189392-25189502)
chr2 (2-91)||(21537264-21537353)
chr2 (1-92)||(13963993-13964084)
chr2 (1-92)||(18376921-18377012)
chr2 (1-92)||(30666983-30667074)
chr2 (1-92)||(25829128-25829219)
chr2 (4-92)||(20568765-20568853)
chr2 (1-89)||(24377095-24377183)
chr2 (1-92)||(19540410-19540501)
chr2 (1-92)||(22188117-22188208)
chr2 (1-92)||(23235001-23235092)
chr2 (1-92)||(30621210-30621301)
chr2 (1-92)||(30623831-30623922)
chr2 (1-89)||(10009768-10009856)
chr2 (1-89)||(25037277-25037365)
chr2 (1-89)||(25041384-25041472)
chr2 (1-89)||(9015388-9015474)
chr2 (1-89)||(40782471-40782559)
chr2 (8-95)||(22317594-22317681)
chr2 (1-111)||(23595565-23595673)
chr2 (1-88)||(28140638-28140725)
chr2 (1-95)||(24576029-24576123)
chr2 (1-111)||(41121715-41121825)
chr2 (1-89)||(24850684-24850772)
chr2 (1-89)||(31800905-31800993)
chr2 (1-111)||(28711694-28711804)
chr2 (1-65)||(23184346-23184410)
chr2 (1-89)||(24779337-24779425)
chr2 (1-93)||(28550932-28551024)
chr2 (1-93)||(44840428-44840520)
chr2 (25-92)||(20152050-20152117)
chr2 (8-92)||(6574138-6574223)
chr2 (8-113)||(26619095-26619200)
chr2 (1-93)||(22776302-22776394)
chr2 (1-93)||(22781680-22781772)
chr2 (13-68)||(38781405-38781460)
chr2 (8-93)||(1587047-1587132)
chr2 (13-110)||(44881173-44881270)
chr2 (17-93)||(14581525-14581601)
chr2 (1-37)||(22258195-22258231)
chr2 (1-89)||(31968061-31968149)
chr2 (1-93)||(40332081-40332173)
chr2 (13-68)||(30557360-30557415)
chr2 (1-48)||(33074220-33074267)
chr2 (1-68)||(35744039-35744106)
chr2 (14-92)||(3277037-3277115)
chr2 (13-67)||(19115089-19115143)
chr2 (13-93)||(22785669-22785749)
chr2 (8-68)||(22802461-22802521)
chr2 (14-92)||(28701244-28701322)
chr2 (13-110)||(18702744-18702841)
chr2 (8-68)||(6392634-6392694)
chr2 (2-38)||(19498012-19498048)
chr2 (25-89)||(23392686-23392750)
chr2 (13-93)||(34321950-34322030)
[»] chr1 (50 HSPs)
chr1 (1-111)||(21028792-21028902)
chr1 (1-109)||(26702102-26702210)
chr1 (1-92)||(22201726-22201817)
chr1 (1-92)||(28492394-28492485)
chr1 (1-92)||(33256341-33256432)
chr1 (1-92)||(33276513-33276604)
chr1 (1-89)||(1577866-1577954)
chr1 (1-110)||(21191837-21191946)
chr1 (1-92)||(22600172-22600263)
chr1 (1-89)||(10757420-10757508)
chr1 (1-89)||(12284422-12284510)
chr1 (1-92)||(32785927-32786018)
chr1 (1-89)||(20954466-20954554)
chr1 (1-89)||(22153856-22153944)
chr1 (1-89)||(36134189-36134277)
chr1 (1-92)||(19717523-19717614)
chr1 (1-95)||(38282566-38282659)
chr1 (1-89)||(12613807-12613895)
chr1 (8-88)||(39200986-39201066)
chr1 (1-92)||(22427347-22427438)
chr1 (1-92)||(48704203-48704294)
chr1 (1-95)||(1900344-1900438)
chr1 (1-83)||(30893091-30893173)
chr1 (14-92)||(35401821-35401899)
chr1 (1-89)||(35040165-35040253)
chr1 (1-93)||(46088988-46089080)
chr1 (1-93)||(48570220-48570312)
chr1 (1-68)||(2268530-2268597)
chr1 (13-92)||(22464799-22464878)
chr1 (1-92)||(25448556-25448647)
chr1 (1-92)||(29215796-29215887)
chr1 (17-111)||(17024935-17025029)
chr1 (8-68)||(30572203-30572263)
chr1 (1-92)||(2267088-2267179)
chr1 (1-68)||(21702813-21702880)
chr1 (13-92)||(2834701-2834780)
chr1 (13-68)||(16235310-16235365)
chr1 (1-66)||(19215611-19215676)
chr1 (1-66)||(23024787-23024852)
chr1 (14-110)||(18896569-18896665)
chr1 (1-89)||(21121057-21121145)
chr1 (13-68)||(2327454-2327509)
chr1 (1-92)||(10250985-10251076)
chr1 (1-68)||(44821559-44821626)
chr1 (14-88)||(23036521-23036595)
chr1 (16-89)||(42284642-42284715)
chr1 (8-68)||(14263465-14263525)
chr1 (1-89)||(21135153-21135241)
chr1 (8-68)||(21204937-21204997)
chr1 (13-89)||(21984607-21984683)
[»] chr7 (59 HSPs)
chr7 (2-103)||(13018565-13018666)
chr7 (1-111)||(39284616-39284726)
chr7 (1-92)||(2913679-2913770)
chr7 (1-88)||(15088516-15088603)
chr7 (1-111)||(41842325-41842435)
chr7 (1-89)||(13730749-13730837)
chr7 (1-92)||(13137966-13138057)
chr7 (1-92)||(16309978-16310069)
chr7 (1-92)||(21692283-21692374)
chr7 (1-92)||(30025901-30025992)
chr7 (1-95)||(13648725-13648819)
chr7 (1-89)||(11319401-11319489)
chr7 (1-89)||(29935432-29935520)
chr7 (1-92)||(13302806-13302897)
chr7 (1-92)||(13880100-13880191)
chr7 (1-92)||(16111955-16112046)
chr7 (1-88)||(16316632-16316719)
chr7 (1-92)||(21695397-21695488)
chr7 (1-89)||(5000896-5000984)
chr7 (1-89)||(11792903-11792991)
chr7 (8-92)||(23280029-23280113)
chr7 (1-92)||(10883244-10883335)
chr7 (22-113)||(13032122-13032213)
chr7 (1-92)||(21283444-21283535)
chr7 (1-92)||(44467060-44467151)
chr7 (1-92)||(28409035-28409126)
chr7 (1-95)||(9069558-9069652)
chr7 (2-92)||(19237114-19237204)
chr7 (1-89)||(2500034-2500122)
chr7 (1-89)||(13260689-13260777)
chr7 (13-92)||(15467924-15468003)
chr7 (1-68)||(22578116-22578183)
chr7 (1-92)||(30944394-30944485)
chr7 (1-92)||(30945427-30945518)
chr7 (1-95)||(33691780-33691874)
chr7 (1-65)||(331641-331705)
chr7 (1-93)||(1293026-1293118)
chr7 (1-92)||(4821470-4821561)
chr7 (1-92)||(14426543-14426634)
chr7 (1-92)||(24788137-24788228)
chr7 (1-92)||(28622427-28622518)
chr7 (1-92)||(33605681-33605772)
chr7 (1-68)||(48236997-48237064)
chr7 (1-89)||(12366822-12366910)
chr7 (1-92)||(14193110-14193201)
chr7 (1-93)||(48062890-48062982)
chr7 (26-93)||(13692372-13692439)
chr7 (2-89)||(14425444-14425531)
chr7 (1-68)||(19711108-19711175)
chr7 (1-68)||(35952783-35952850)
chr7 (1-46)||(8182926-8182971)
chr7 (13-89)||(19339324-19339400)
chr7 (1-65)||(27871714-27871778)
chr7 (1-92)||(9709873-9709964)
chr7 (25-111)||(13880608-13880695)
chr7 (8-110)||(13894051-13894153)
chr7 (25-110)||(9098299-9098384)
chr7 (8-68)||(2265614-2265674)
chr7 (1-65)||(24794813-24794877)
[»] scaffold0359 (1 HSPs)
scaffold0359 (1-92)||(5710-5801)
[»] chr8 (49 HSPs)
chr8 (1-92)||(12757831-12757922)
chr8 (1-89)||(602791-602879)
chr8 (1-89)||(39693527-39693615)
chr8 (1-92)||(19156188-19156279)
chr8 (1-110)||(43644888-43644997)
chr8 (1-92)||(16188976-16189067)
chr8 (1-91)||(24646330-24646420)
chr8 (1-90)||(18321229-18321318)
chr8 (1-89)||(17525800-17525888)
chr8 (1-89)||(18679807-18679895)
chr8 (1-89)||(18718993-18719081)
chr8 (1-92)||(16207298-16207389)
chr8 (1-110)||(19707498-19707607)
chr8 (1-89)||(17441878-17441966)
chr8 (1-89)||(29693307-29693395)
chr8 (1-92)||(16681371-16681462)
chr8 (1-92)||(17797414-17797505)
chr8 (1-92)||(17914451-17914542)
chr8 (1-95)||(21932875-21932969)
chr8 (1-85)||(20382469-20382553)
chr8 (1-89)||(17267466-17267554)
chr8 (8-92)||(18685465-18685549)
chr8 (8-92)||(18722714-18722798)
chr8 (8-92)||(18731059-18731143)
chr8 (1-92)||(17701737-17701828)
chr8 (1-92)||(23185294-23185385)
chr8 (25-92)||(33082873-33082940)
chr8 (1-92)||(40845455-40845546)
chr8 (1-68)||(25164062-25164129)
chr8 (1-92)||(30421496-30421588)
chr8 (8-92)||(19943234-19943319)
chr8 (15-92)||(23263680-23263757)
chr8 (1-92)||(14989519-14989610)
chr8 (2-68)||(15336180-15336246)
chr8 (2-68)||(15425245-15425311)
chr8 (2-68)||(15516549-15516615)
chr8 (8-68)||(9320567-9320627)
chr8 (1-68)||(6407718-6407785)
chr8 (1-92)||(18151714-18151805)
chr8 (1-68)||(22673770-22673837)
chr8 (1-92)||(24551266-24551357)
chr8 (1-88)||(45538511-45538598)
chr8 (1-95)||(18121174-18121265)
chr8 (15-111)||(22461687-22461783)
chr8 (13-68)||(1237641-1237696)
chr8 (13-68)||(22663120-22663175)
chr8 (2-38)||(7018418-7018454)
chr8 (2-38)||(20259654-20259690)
chr8 (2-38)||(21046284-21046320)
[»] chr3 (57 HSPs)
chr3 (4-92)||(41495001-41495089)
chr3 (1-92)||(13780653-13780744)
chr3 (1-92)||(37467332-37467423)
chr3 (1-92)||(49642831-49642922)
chr3 (1-89)||(14393076-14393164)
chr3 (1-89)||(20646153-20646241)
chr3 (1-89)||(12963157-12963245)
chr3 (1-92)||(13948335-13948426)
chr3 (1-92)||(16032524-16032615)
chr3 (1-92)||(22804092-22804183)
chr3 (1-68)||(31303385-31303452)
chr3 (13-92)||(38177712-38177791)
chr3 (1-111)||(12388922-12389032)
chr3 (1-95)||(28582105-28582199)
chr3 (2-92)||(47207706-47207796)
chr3 (1-89)||(17238994-17239082)
chr3 (1-68)||(15903197-15903264)
chr3 (1-92)||(29951507-29951598)
chr3 (1-92)||(30000661-30000752)
chr3 (1-89)||(16658690-16658778)
chr3 (1-92)||(6090731-6090822)
chr3 (1-68)||(40799873-40799940)
chr3 (8-92)||(11223569-11223653)
chr3 (1-89)||(12726302-12726390)
chr3 (1-68)||(11868268-11868335)
chr3 (8-111)||(20725093-20725196)
chr3 (1-68)||(25398348-25398415)
chr3 (13-92)||(49553558-49553637)
chr3 (1-92)||(53056796-53056887)
chr3 (1-87)||(2561187-2561273)
chr3 (13-95)||(18121688-18121770)
chr3 (13-95)||(18142818-18142900)
chr3 (14-92)||(20627500-20627578)
chr3 (8-92)||(14955433-14955517)
chr3 (8-111)||(12968312-12968415)
chr3 (25-92)||(13824092-13824159)
chr3 (1-68)||(47405514-47405581)
chr3 (1-89)||(19889017-19889103)
chr3 (1-89)||(21605726-21605814)
chr3 (13-89)||(21640878-21640954)
chr3 (8-92)||(29855415-29855499)
chr3 (15-106)||(23538221-23538312)
chr3 (1-68)||(46796460-46796527)
chr3 (1-92)||(52920405-52920496)
chr3 (16-90)||(14969341-14969415)
chr3 (1-89)||(21636742-21636830)
chr3 (13-68)||(2785075-2785130)
chr3 (15-110)||(19249463-19249558)
chr3 (1-88)||(22140763-22140850)
chr3 (1-68)||(24775627-24775694)
chr3 (1-68)||(30054310-30054377)
chr3 (13-68)||(33583240-33583295)
chr3 (1-47)||(1728129-1728175)
chr3 (14-92)||(46349913-46349991)
chr3 (13-47)||(49666519-49666553)
chr3 (1-66)||(9700131-9700196)
chr3 (2-47)||(37412605-37412650)
[»] scaffold0324 (1 HSPs)
scaffold0324 (3-110)||(9958-10065)
[»] scaffold0084 (3 HSPs)
scaffold0084 (1-92)||(49332-49423)
scaffold0084 (1-89)||(32485-32573)
scaffold0084 (2-68)||(389-455)
[»] chr6 (42 HSPs)
chr6 (1-92)||(15987233-15987324)
chr6 (1-89)||(19086158-19086246)
chr6 (1-89)||(20112761-20112849)
chr6 (1-89)||(24116828-24116916)
chr6 (1-92)||(18378314-18378405)
chr6 (1-95)||(15302200-15302294)
chr6 (1-68)||(12715502-12715569)
chr6 (1-92)||(23284564-23284655)
chr6 (1-88)||(25594068-25594155)
chr6 (1-95)||(9717843-9717937)
chr6 (1-92)||(13602172-13602263)
chr6 (13-95)||(22802153-22802235)
chr6 (1-95)||(32544265-32544359)
chr6 (8-92)||(14100498-14100582)
chr6 (1-89)||(16265211-16265299)
chr6 (13-92)||(15531682-15531761)
chr6 (14-92)||(21625114-21625192)
chr6 (2-92)||(26943577-26943667)
chr6 (2-68)||(29918018-29918084)
chr6 (2-50)||(19623980-19624028)
chr6 (1-92)||(15954703-15954794)
chr6 (1-92)||(20730762-20730853)
chr6 (13-92)||(21235137-21235216)
chr6 (1-68)||(22076489-22076556)
chr6 (1-95)||(26972283-26972375)
chr6 (13-65)||(13435544-13435596)
chr6 (8-92)||(20487976-20488060)
chr6 (1-68)||(12423261-12423328)
chr6 (1-68)||(16336127-16336194)
chr6 (1-92)||(18435556-18435647)
chr6 (14-111)||(10640457-10640555)
chr6 (3-93)||(12348995-12349085)
chr6 (14-111)||(19470683-19470780)
chr6 (8-68)||(16877220-16877280)
chr6 (8-92)||(21618251-21618335)
chr6 (25-92)||(19688790-19688857)
chr6 (1-68)||(33352008-33352075)
chr6 (1-66)||(19482752-19482817)
chr6 (1-68)||(17381521-17381588)
chr6 (1-66)||(17316609-17316674)
chr6 (1-89)||(19066079-19066167)
chr6 (8-68)||(19833115-19833175)
[»] scaffold0290 (1 HSPs)
scaffold0290 (1-92)||(18641-18732)
[»] scaffold0161 (2 HSPs)
scaffold0161 (1-92)||(10128-10219)
scaffold0161 (1-68)||(14816-14883)
[»] scaffold0004 (3 HSPs)
scaffold0004 (1-92)||(377579-377670)
scaffold0004 (5-110)||(220242-220346)
scaffold0004 (6-113)||(244283-244390)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1-111)||(9903-10013)
[»] scaffold0411 (1 HSPs)
scaffold0411 (1-89)||(12209-12297)
[»] scaffold0426 (1 HSPs)
scaffold0426 (1-92)||(13571-13662)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-92)||(14648-14739)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-92)||(1690-1781)
[»] scaffold0364 (1 HSPs)
scaffold0364 (1-113)||(6007-6119)
[»] scaffold0771 (1 HSPs)
scaffold0771 (1-92)||(475-566)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-92)||(27449-27540)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-92)||(25995-26086)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-88)||(7926-8013)
scaffold0026 (1-88)||(60016-60103)
[»] scaffold0005 (1 HSPs)
scaffold0005 (2-89)||(212355-212442)
[»] scaffold0035 (2 HSPs)
scaffold0035 (1-95)||(19489-19583)
scaffold0035 (1-47)||(99270-99316)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-92)||(15793-15885)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-89)||(15117-15205)
[»] scaffold0251 (1 HSPs)
scaffold0251 (6-68)||(7708-7770)
[»] scaffold1747 (1 HSPs)
scaffold1747 (8-92)||(1324-1408)
[»] scaffold1745 (1 HSPs)
scaffold1745 (8-92)||(3-87)
[»] scaffold0479 (1 HSPs)
scaffold0479 (1-89)||(9969-10057)
[»] scaffold0210 (1 HSPs)
scaffold0210 (1-89)||(1660-1748)
[»] scaffold0120 (2 HSPs)
scaffold0120 (1-92)||(36795-36886)
scaffold0120 (1-92)||(42119-42210)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-92)||(20991-21082)
[»] scaffold0217 (3 HSPs)
scaffold0217 (1-95)||(19031-19125)
scaffold0217 (1-65)||(9560-9624)
scaffold0217 (1-92)||(22151-22242)
[»] scaffold0023 (1 HSPs)
scaffold0023 (14-92)||(103585-103663)
[»] scaffold0022 (3 HSPs)
scaffold0022 (1-110)||(159055-159164)
scaffold0022 (13-62)||(37414-37463)
scaffold0022 (13-62)||(135474-135523)
[»] scaffold0012 (1 HSPs)
scaffold0012 (8-92)||(215517-215601)
[»] scaffold1359 (2 HSPs)
scaffold1359 (1-92)||(675-766)
scaffold1359 (2-89)||(1778-1865)
[»] scaffold0530 (1 HSPs)
scaffold0530 (17-68)||(2039-2090)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-92)||(60803-60894)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-92)||(90075-90166)
[»] scaffold0273 (1 HSPs)
scaffold0273 (8-111)||(5634-5736)
[»] scaffold0227 (1 HSPs)
scaffold0227 (1-92)||(22676-22767)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-92)||(78386-78477)
[»] scaffold0176 (1 HSPs)
scaffold0176 (14-92)||(9168-9246)
[»] scaffold0861 (1 HSPs)
scaffold0861 (19-92)||(4967-5040)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-110)||(74581-74690)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-93)||(17784-17876)
[»] scaffold0064 (1 HSPs)
scaffold0064 (8-92)||(43939-44023)
[»] scaffold0439 (1 HSPs)
scaffold0439 (13-92)||(6760-6839)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-68)||(2774-2841)
[»] scaffold0247 (2 HSPs)
scaffold0247 (1-68)||(25443-25510)
scaffold0247 (1-38)||(15813-15850)
[»] scaffold0211 (1 HSPs)
scaffold0211 (2-92)||(15642-15732)
[»] scaffold0056 (3 HSPs)
scaffold0056 (15-113)||(36183-36281)
scaffold0056 (1-65)||(25712-25776)
scaffold0056 (1-89)||(34827-34915)
[»] scaffold0387 (1 HSPs)
scaffold0387 (3-68)||(7383-7448)
[»] scaffold0081 (1 HSPs)
scaffold0081 (2-110)||(40638-40746)
[»] scaffold0040 (1 HSPs)
scaffold0040 (14-50)||(1583-1619)
[»] scaffold0414 (1 HSPs)
scaffold0414 (8-47)||(7221-7260)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-68)||(5646-5713)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1-35)||(7824-7858)
[»] scaffold0011 (1 HSPs)
scaffold0011 (2-68)||(164990-165056)
[»] scaffold0607 (1 HSPs)
scaffold0607 (1-38)||(6006-6043)
[»] scaffold0908 (1 HSPs)
scaffold0908 (8-68)||(3939-3999)
[»] scaffold0473 (1 HSPs)
scaffold0473 (1-65)||(2738-2802)


Alignment Details
Target: chr5 (Bit Score: 94; Significance: 5e-46; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12352936 - 12352827
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  12352936 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaatgcaagcatccaatgcctttaacttca 12352837  T
Q  101 tttgaattag 110  Q
    ||||||||||    
T  12352836 tttgaattag 12352827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 23881063 - 23881173
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  23881063 gagacacaaactaagtagtggagatagtggttgtacacttcgtacaattgcactttgtcaacgctcttcaaaaagcaagcatccaatgccttcaacttca 23881162  T
Q  101 tttgaattagt 111  Q
    |||||||||||    
T  23881163 tttgaattagt 23881173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 6499235 - 6499340
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  6499235 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaagcaagcatccgatgccttcaacttca 6499334  T
Q  101 tttgaa 106  Q
    ||||||    
T  6499335 tttgaa 6499340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 9398875 - 9398765
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| |||||| |||||| ||||||||| |||||||    
T  9398875 gagacacaaactgagtagtggagatagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaaaagtaagcattcaatgccttcaacttca 9398776  T
Q  101 tttgaattagt 111  Q
    |||||||||||    
T  9398775 tttgaattagt 9398765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 21099845 - 21099733
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||| |||| |||| |||||||||||||||||| | |||||    
T  21099845 gagacacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtaaacgttcttcaaaaggcaagcatccaatgccttcagcttca 21099746  T
Q  101 tttgaattagttg 113  Q
    |||||||||||||    
T  21099745 tttgaattagttg 21099733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 642836 - 642739
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaattag 110  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||||    
T  642836 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaaacaagcatccaatgccttcaactttatttgaattag 642739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21910552 - 21910643
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  21910552 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 21910643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 23413115 - 23413027
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||||| ||||||||||||||    
T  23413115 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaaaaacaagcatccaatgc 23413027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21199144 - 21199035
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| |  ||| | | ||||||||||||||| || ||||    
T  21199144 gagacacaaactgagtagtggaggtagtgattgtacacttcgtacaattgtactttgtcaacgctttccaaagaacgagcatccaatgccttcaaattca 21199045  T
Q  101 tttgaattag 110  Q
    ||||||||||    
T  21199044 tttgaattag 21199035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 17814964 - 17815052
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||| ||| | |||||||| |||||    
T  17814964 gagacacaaactgagtagtggagatagtggttgtacactccgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgc 17815052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21072381 - 21072293
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | ||||||||||||||    
T  21072381 gagacacaaactgagtagtagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 21072293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 89563 - 89475
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||| |||||| ||| | ||||||| ||||||    
T  89563 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaatgctcttcaaagaacaagcatgcaatgc 89475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 19536442 - 19536354
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | ||| ||||||||||    
T  19536442 gagacacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaaacatccaatgc 19536354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6512569 - 6512502
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||    
T  6512569 gagacacaaactgagtagtgaagatagtggttgtacacttcgtacaattgtactttgtcaacgctctt 6512502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 7745834 - 7745743
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||  || | |||||||||||||||||    
T  7745834 gagacaaaaaccgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 7745743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 41566575 - 41566484
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| | ||||||||||| ||| |  || |||||||||||||    
T  41566575 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatatcaacgctcttcaaagaataaacatccaatgcctt 41566484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 20550891 - 20550981
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||||| | ||||||||||||||| ||| | |||||||||||||||||    
T  20550891 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgta-tttgtcaacgctctttaaagaacaagcatccaatgcctt 20550981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 26784353 - 26784434
Alignment:
Q  4 acacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatcca 85  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||| ||| |  |||||||||    
T  26784353 acacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaataagcatcca 26784434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 33022660 - 33022751
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| ||||  |||||||||| |||||||||||||| ||||||||||| |||||||||||||||||  || | ||| |||||||||||||    
T  33022660 gagacaaaaacatagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgcctt 33022751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4887018 - 4887109
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| |||||||   | |||||||||||||||||  || | |||||||||||||||||    
T  4887018 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacacacgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 4887109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 13545641 - 13545562
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||| | |||||||||||| ||||||| ||| |||||||||||||||||  || | |||||||||||||||||    
T  13545641 gagtagtggaggtggtggttgtacacttcgtacacttgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 13545562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 29138547 - 29138456
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||  | ||| || ||||||||||  || |  ||||||||||||||||    
T  29138547 gagacacaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgacaacgctctttgaagaataagcatccaatgcctt 29138456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 28464480 - 28464388
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    |||||| |||| ||||||| |||||||||||||||||| ||||||||  | ||| |||||||||||||  || |  |||||||||||||||||    
T  28464480 gagacaaaaacagagtagtagagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 28464388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9088965 - 9089032
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||  | ||| |||||||||||||    
T  9088965 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 9089032  T

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Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 25930297 - 25930206
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||| |||||||||||||||||  ||||||||  | ||| |||||||||||||  ||||  ||||||||||||||||    
T  25930297 gagacaaaaacagagtagtagagatagtggttgtacaattcgtacaaacgtactatgtcaacgctctttgaaaaataagcatccaatgcctt 25930206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 31117873 - 31117964
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||  |||||| ||||||| ||||||| ||| ||||||||||| |||||  || | |||||||||||||||||    
T  31117873 gagacaaaaacagagtagtggaagtagtggatgtacacttcgtacatttgtactttgtcaacactctttgaagaacaagcatccaatgcctt 31117964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 3245582 - 3245490
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    |||||| |||| ||||| |||||||||||||||||||| ||||||||  | ||| |||||||||||||  || |  ||||||| |||||||||    
T  3245582 gagacaaaaacagagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgccttt 3245490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 11993884 - 11993972
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||| |||| ||||||||||  |||||||||||||| |||||||   | |||||||||||||||||  || | ||||||||||||||    
T  11993884 gagacaaaaacagagtagtggaagtagtggttgtacacttcgtacatacgtactttgtcaacgctctttgaagaacaagcatccaatgc 11993972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 30742983 - 30743043
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||| ||||||||||| |||||||||||||| ||||||||  | |||||||||||||||||    
T  30742983 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt 30743043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14086680 - 14086613
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| ||||||||||| ||| |||||||||| ||||||||  | |||||||||||||||||    
T  14086680 gagacaaaaacagagtagtggaggtagcggttgtacacttcgtacaaacgtactttgtcaacgctctt 14086613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 30115978 - 30115911
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| |||||||||||||||||||||||||  ||||||||  | ||| |||||||||||||    
T  30115978 gagacaaaaacagagtagtggagatagtggttgtacatttcgtacaaacgtactatgtcaacgctctt 30115911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 25096960 - 25096856
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggac---tttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttg 104  Q
    |||| ||||||||||| |||||||||||||| |||||||||||  |   ||| ||||||||||| ||| | ||||||||||||| ||| || | | ||||    
T  25096960 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtccttttttttcaacgctctttaaagaacaagcatccaatgtcttcaaatccttttg 25096861  T
Q  105 aatta 109  Q
    |||||    
T  25096860 aatta 25096856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 25154930 - 25154826
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggac---tttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttg 104  Q
    |||| ||||||||||| |||||||||||||| |||||||||||  |   ||| ||||||||||| ||| | ||||||||||||| ||| || | | ||||    
T  25154930 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtccttttttttcaacgctctttaaagaacaagcatccaatgtcttcaaatccttttg 25154831  T
Q  105 aatta 109  Q
    |||||    
T  25154830 aatta 25154826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28139603 - 28139649
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaa 47  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||    
T  28139603 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaa 28139649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 10848769 - 10848861
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    |||||| |||| |||||||||||||||||||||||||| | ||||||  | | | |||||||||||||  || |  ||||||| |||||||||    
T  10848769 gagacaaaaacagagtagtggagatagtggttgtacactttgtacaaacgtattatgtcaacgctctttgaagaataagcatctaatgccttt 10848861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 42243683 - 42243743
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||| ||||||||||| |||||||||||||| ||||||||  | | |||||||||||||||    
T  42243683 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtattttgtcaacgctctt 42243743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 33933263 - 33933330
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||  | ||| | |||||||||||    
T  33933263 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactatatcaacgctctt 33933330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 11208125 - 11208060
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    ||||| |||| ||||||||||| |||||||| ||||| |||||| || | |||||||||||||||||    
T  11208125 agacaaaaacagagtagtggaggtagtggttatacacttcgtac-atagtactttgtcaacgctctt 11208060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 15516972 - 15517056
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||| ||||||||||| |||||||||||||| ||||||||  | ||| || |||| |||||  || |  ||||||||||||||||    
T  15516972 aaacagagtagtggaggtagtggttgtacacttcgtacaaaagtactatgccaacactctttgaagaataagcatccaatgcctt 15517056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 35932147 - 35932059
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||| |||| ||||||||||  |||||||||||||| ||||||||  | ||| ||||||| |||||  || |  |||||||||||||    
T  35932147 gagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgc 35932059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 7e-42; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 40846093 - 40846203
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| || |||||||    
T  40846093 gagatacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaagcaagcatccaatgctttcaacttca 40846192  T
Q  101 tttgaattagt 111  Q
    |||||||||||    
T  40846193 tttgaattagt 40846203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 37985729 - 37985638
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | |||||||||||||||||    
T  37985729 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgcctt 37985638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 55380284 - 55380372
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | ||||||||||||||    
T  55380284 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 55380372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 9140906 - 9140997
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | |||||||||||||||||    
T  9140906 gagacacaaactgagtagtgaagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgcctt 9140997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 12601099 - 12601186
Alignment:
Q  5 cacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | |||||||||||||||||    
T  12601099 cacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgcctt 12601186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3395584 - 3395672
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | | ||||||||||||    
T  3395584 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaactagcatccaatgc 3395672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 12811292 - 12811204
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||| ||   |||||||||||||||||    
T  12811292 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattttactttgtcaacgctattagaa---caagcatccaatgcctt 12811204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 45833395 - 45833476
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |  |||||||||||||    
T  45833395 aaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaaaaagcatccaatgc 45833476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 19621178 - 19621090
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| | | | ||||||||||||||    
T  19621178 gagacacaaactgaatagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcatagaacaagcatccaatgc 19621090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 19666366 - 19666454
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| ||| | |||| || ||||||    
T  19666366 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaactctcttcaaagaacaagtattcaatgc 19666454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 23750516 - 23750619
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt-aaaaaagcaagcatccaatgcctttaacttc 99  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||   |||| ||| | |||| |||||||| |||||||||||||||    
T  23750516 gagacacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttg---acgcacttcataaaaacaagcatcaaatgcctttaacttc 23750612  T
Q  100 atttgaa 106  Q
    |||||||    
T  23750613 atttgaa 23750619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 29680661 - 29680573
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||| ||||||||||||||||| || |||||||| ||||||||||| ||||||||||||||||| ||| | ||||||||||||||    
T  29680661 gagacacatactgagtagtggagataatgattgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 29680573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 14605023 - 14604936
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    ||||| |||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| ||| | ||||||||||||||    
T  14605023 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 14604936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 16632434 - 16632525
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||| | |||||| |||||||||||||| ||||||||||| ||||||||||||||||| ||| | |||| ||||||||||||    
T  16632434 gagacacaaactgattggtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagaatccaatgcctt 16632525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 19884696 - 19884787
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| || ||||||||||||||||||||||| ||||||||||| |||||||||||||||||  || | |||||||||||||||||    
T  19884696 gagacaaaaacagattagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 19884787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 6641678 - 6641787
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| ||| | |||| ||| |||||||| || | |     
T  6641678 gagacataaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagtatcaaatgccttcaaatcct 6641777  T
Q  101 tttgaattag 110  Q
    ||||||||||    
T  6641778 tttgaattag 6641787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 22675630 - 22675546
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||| |||||||||||||| | ||||||||| |||||||||||||||||  || | |||||||| ||||||||    
T  22675630 aaactgagtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctttgaagaacaagcatcaaatgcctt 22675546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10072929 - 10073020
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| ||||  ||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||  || | ||||| |||||||||||    
T  10072929 gagacaaaaacatagtagtggagatagtggttgtacacttcgtacatttgtactttgtcaacgctctttgaataacaagcctccaatgcctt 10073020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 29121364 - 29121455
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||  | ||||||||||||||||| ||| | |||||||||| ||||||    
T  29121364 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttaaagaacaagcatccagtgcctt 29121455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 14904473 - 14904386
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatg 88  Q
    |||||||||||||||| ||||||||| |||||||  || ||||||||||| ||| ||||||||||||| ||| |  ||||||||||||    
T  14904473 gagacacaaactgagtggtggagataatggttgtttacttcgtacaattgtactatgtcaacgctcttcaaagaataagcatccaatg 14904386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 37435652 - 37435561
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| ||||  |||||||||| |||||||||||||| ||||||||| | ||| |||||||||||||  || | |||||||||||||||||    
T  37435652 gagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaatagtactatgtcaacgctctttgaagaacaagcatccaatgcctt 37435561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 15139283 - 15139331
Alignment:
Q  63 gctcttaaaaaagcaagcatccaatgcctttaacttcatttgaattagt 111  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  15139283 gctcttcaaaaagcaagcatccaatgccttcaacttcatttgaattagt 15139331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17398791 - 17398699
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||  | ||| |||||||||||||  || |  |||||||||||||||||    
T  17398791 gagacaaaaacagagtagtggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 17398699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6517479 - 6517546
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||  | ||| |||||||||||||    
T  6517479 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 6517546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10692845 - 10692936
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| || |||||  | ||||||| |||||||||  || | |||||||||||||||||    
T  10692845 gagacaaaaacagagtagtggaggtagtggttgtacacttcatacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgcctt 10692936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10906611 - 10906702
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| || |||||  | ||||||| |||||||||  || | |||||||||||||||||    
T  10906611 gagacaaaaacagagtagtggaggtagtggttgtacacttcatacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgcctt 10906702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 111
Target Start/End: Complemental strand, 17788152 - 17788053
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgt-caacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaattagt 111  Q
    ||||||||||||||||||||||||||||||||||||||  |||| | ||||| |||  ||| |  ||||||| ||||||||||| ||| |||||| ||||    
T  17788152 gagtagtggagatagtggttgtacacatcgtacaattgtcctttttccaacgttctccaaagaataagcatctaatgcctttaaattcctttgaaatagt 17788053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 19911994 - 19911931
Alignment:
Q  5 cacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    ||||||||||||||||||| |||||||||||||| | ||||||||  ||| |||||||||||||    
T  19911994 cacaaactgagtagtggaggtagtggttgtacactttgtacaattatactatgtcaacgctctt 19911931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 16853497 - 16853585
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||| |||| ||||||||||| |||||||||||||| || ||||  || |||||||||||||||||  |  | ||||||||||||||    
T  16853497 gagacaaaaacagagtagtggaggtagtggttgtacacttcatacagatgtactttgtcaacgctctttgaggaacaagcatccaatgc 16853585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 54679931 - 54680015
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||| ||||||||||| |||||||||||||| ||||||||  | |||||||||| ||||||  || | ||| |||||||||||||    
T  54679931 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctctttgaagaacaaacatccaatgcctt 54680015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 413008 - 413063
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||||||||  ||||||||||||| ||||||||| | |||||||||||||||||    
T  413008 gagtagtggaggcagtggttgtacacttcgtacaatcgtactttgtcaacgctctt 413063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 3105536 - 3105469
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||    ||| |||||||||||||    
T  3105536 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacatactatgtcaacgctctt 3105469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 56034568 - 56034659
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||| | ||||||||||||||||| ||||||||  |   ||||||| |||||||||||||||||  || | ||| |||||||||||||    
T  56034568 gagacacatattgagtagtggagatagtagttgtacattttagacaattgtactttgtcaacgctctttgaagaacaaacatccaatgcctt 56034659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 8685548 - 8685511
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattg 50  Q
    |||||||||||||||||||||||||| |||||||||||    
T  8685548 gagtagtggagatagtggttgtacacttcgtacaattg 8685511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 17247245 - 17247298
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaa 61  Q
    |||| |||||||||||  ||||||||||||| ||||||||||| ||||||||||    
T  17247245 aaacagagtagtggaggcagtggttgtacacttcgtacaattgtactttgtcaa 17247298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20977451 - 20977516
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctc 66  Q
    |||||| |||| |||||||| ||||||||||||||||| ||||||||  | ||| |||||||||||    
T  20977451 gagacaaaaacagagtagtgcagatagtggttgtacacttcgtacaaacgcactatgtcaacgctc 20977516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 41114875 - 41114782
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaa 106  Q
    |||| ||||| |||||||||||||||  ||||||||||  |||| ||||| ||||  || ||  |||||||||||||||| || ||||||||||    
T  41114875 gagtggtggaaatagtggttgtacacgacgtacaattgtcctttttcaactctctccaacaaaaaagcatccaatgccttcaaattcatttgaa 41114782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 8105638 - 8105698
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||| ||||||||||| |||||||||||||  ||||||||  | |||||||||||||||||    
T  8105638 aaacagagtagtggaggtagtggttgtacatttcgtacaaacgtactttgtcaacgctctt 8105698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 40860661 - 40860749
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||| |||| ||||||||||  ||||||||||||||||| |||||  | ||| |||||||||||||  || |  |||||||||||||    
T  40860661 gagacaaaaacagagtagtggaagtagtggttgtacacatcatacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 40860749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 56533172 - 56533112
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||| ||||||||||  |||||||||||||| ||||||||  | |||||||||||||||||    
T  56533172 aaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt 56533112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 3483739 - 3483806
Alignment:
Q  25 tagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||| | | ||||||||||| |||||||||||||||||  || |  ||||||||||||||||    
T  3483739 tagtggttgtgcgcttcgtacaattgtactttgtcaacgctctttgaagaataagcatccaatgcctt 3483806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 11915701 - 11915804
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaat 107  Q
    |||| |||||||||||   |||||||||||| | |||||||||  ||||  |||||||||| ||| |  |||||||||||||||| || | ||||||||     
T  11915701 aaacagagtagtggaggcggtggttgtacactttgtacaattgtccttttccaacgctcttcaaagaataagcatccaatgccttcaaatccatttgaaa 11915800  T
Q  108 tagt 111  Q
    ||||    
T  11915801 tagt 11915804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13576231 - 13576140
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||| ||||||  |||||||| ||||| ||||||| ||| ||| |||||||||||||  || | |||||||| ||||||||    
T  13576231 gagacaaaaacagagcagtggatgtagtggttttacacttcgtacagttgtactatgtcaacgctctttgaagaacaagcatctaatgcctt 13576140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 17540396 - 17540455
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctct 67  Q
    |||| |||||||||||||| ||||||||||| |||||||||||  |||| ||||| ||||    
T  17540396 aaacagagtagtggagataatggttgtacacttcgtacaattgtcctttttcaacactct 17540455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22190840 - 22190907
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| ||||||||||  |||||||||||||| ||||||||  | ||| |||||||||||||    
T  22190840 gagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 22190907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 38513872 - 38513939
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| |||||||| |  |||||||||||||| ||||||||| | ||| |||||||||||||    
T  38513872 gagacaaaaacagagtagtgaaagtagtggttgtacacttcgtacaatcgtactatgtcaacgctctt 38513939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 16940026 - 16940075
Alignment:
Q  17 agtggagatagtggttgtacacatcgtacaattggactttgtcaacgctc 66  Q
    |||||||||||||||||||||| ||||||||  | ||| |||||||||||    
T  16940026 agtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctc 16940075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 3e-41; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 39037748 - 39037639
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| |||||||| |||||||    
T  39037748 gagacacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaagcaagcatctaatgccttcaacttca 39037649  T
Q  101 tttgaattag 110  Q
    ||||||||||    
T  39037648 tttgaattag 39037639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 22455096 - 22454988
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    ||||||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||||||| || ||||||||||||||||||||||| |||||||    
T  22455096 gagacacaaactgagtagtggaggtactggttgtacacttcgtacaattgtactttgtcaacgcttttcaaaaagcaagcatccaatgccttcaacttca 22454997  T
Q  101 tttgaatta 109  Q
    |||||||||    
T  22454996 tttgaatta 22454988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 25189392 - 25189502
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    |||||||||| |||||||||||| |||||||||||||  ||||||||||| ||||||||||||||||| |||||||||| |||||||||||| |||||||    
T  25189392 gagacacaaattgagtagtggaggtagtggttgtacatttcgtacaattgtactttgtcaacgctcttcaaaaagcaagaatccaatgccttcaacttca 25189491  T
Q  101 tttgaattagt 111  Q
    |||||||||||    
T  25189492 tttgaattagt 25189502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 21537353 - 21537264
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcct 91  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  21537353 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaagcaagcatccaatgcct 21537264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13964084 - 13963993
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  13964084 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 13963993  T

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Target: chr2; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 18377012 - 18376921
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  18377012 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 18376921  T

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Target: chr2; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 30666983 - 30667074
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  30666983 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagatcaagcatccaatgcctt 30667074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 25829128 - 25829219
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  25829128 gagacacaaaatgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 25829219  T

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Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 20568853 - 20568765
Alignment:
Q  4 acacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  20568853 acacaaactgagtagtggggatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 20568765  T

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Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 24377095 - 24377183
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | ||||||||||||||    
T  24377095 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 24377183  T

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Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 19540410 - 19540501
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | |||||||||||| ||||    
T  19540410 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctctttaaagaacaagcatccaatacctt 19540501  T

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Target: chr2; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 22188208 - 22188117
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||||| ||| | |||||||||||||||||    
T  22188208 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattatactttgttaacgctcttcaaagaacaagcatccaatgcctt 22188117  T

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Target: chr2; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 23235001 - 23235092
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| ||| |  ||||||||||||||||    
T  23235001 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacactcttcaaagaataagcatccaatgcctt 23235092  T

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Target: chr2; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 30621210 - 30621301
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||| | ||| |||||||||||||    
T  30621210 gagacacaaactgagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgctcttcaaagatcaaacatccaatgcctt 30621301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 30623831 - 30623922
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||| | ||| |||||||||||||    
T  30623831 gagacacaaactgagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgctcttcaaagatcaaacatccaatgcctt 30623922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 10009856 - 10009768
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||| ||| |||||||| |||| ||| | ||||||||||||||    
T  10009856 gagacacaaactgagtagtggagatagtggttgtacatttcgtacaattgtactatgtcaacgttcttcaaagaacaagcatccaatgc 10009768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 25037365 - 25037277
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| || ||| | ||| ||||||||||    
T  25037365 gagacacaaactgagtagtggagatagtggttgtacacttcgaacaattgtactttgtcaacgcttttcaaagaacaaacatccaatgc 25037277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 25041472 - 25041384
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| || ||| | ||| ||||||||||    
T  25041472 gagacacaaactgagtagtggagatagtggttgtacacttcgaacaattgtactttgtcaacgcttttcaaagaacaaacatccaatgc 25041384  T

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Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 9015474 - 9015388
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||| |||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||| ||| |  |||||||||||||    
T  9015474 gagatacaaactgagtagtggagatagtggttgtacac--cgtacaattgtactttgtcaacgctcttcaaagaataagcatccaatgc 9015388  T

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Target: chr2; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 40782471 - 40782559
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||| |||| |||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | ||| ||||||||||    
T  40782471 gagacacaaactaagtattggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaaacatccaatgc 40782559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 22317594 - 22317681
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaa 95  Q
    ||||||| |||||||| ||||||||||| || ||||||||||| |||||||||||||||||  || | ||||||||||||||||||||    
T  22317594 aaactgaatagtggaggtagtggttgtatacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctttaa 22317681  T

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Target: chr2; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 23595673 - 23595565
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    |||||||||||||||||| |||| |||||||| ||||| ||||||||||| ||||||||||||||  | | | | |||| |||||||||||| || ||||    
T  23595673 gagacacaaactgagtagaggaggtagtggttctacacttcgtacaattgtactttgtcaacgct--tcagagaacaagaatccaatgccttcaaattca 23595576  T
Q  101 tttgaattagt 111  Q
    |||||||||||    
T  23595575 tttgaattagt 23595565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 28140725 - 28140638
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatg 88  Q
    ||||||||||||||||||||||||||||| | |||||| | ||||||||| ||| ||||||||||||| ||| | |||||||||||||    
T  28140725 gagacacaaactgagtagtggagatagtgatggtacactttgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatg 28140638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 24576029 - 24576123
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaa 95  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||||||| ||||||||||| ||||| ||  | ||| || |||||||||||||    
T  24576029 gagacacaaactaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaactctcttcaacgaacaaacaaccaatgcctttaa 24576123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 41121825 - 41121715
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    ||||||||||| ||||||||||| |||||||||||||  ||| ||||||| |||||||||| |||||| ||| |||||  |||||||||||| || | |     
T  41121825 gagacacaaacagagtagtggaggtagtggttgtacatttcgcacaattgtactttgtcaatgctcttcaaagagcaataatccaatgccttcaaatcct 41121726  T
Q  101 tttgaattagt 111  Q
    |||||||||||    
T  41121725 tttgaattagt 41121715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 24850772 - 24850684
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||| |||||||||||||  |||||||||||||  ||||||| ||| ||||||||||||||||| ||| | ||||||||||||||    
T  24850772 gagacacacactgagtagtggatgtagtggttgtacatttcgtacacttgtactttgtcaacgctcttcaaagaacaagcatccaatgc 24850684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 31800993 - 31800905
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||| |||| |||||||||||||||||||||||||| |||||||| || |||||||||||||||||  || | ||| ||||||||||    
T  31800993 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaatgtactttgtcaacgctctttgaagatcaaacatccaatgc 31800905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 28711804 - 28711694
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||  | ||||| |||||||||||  || | ||||||||||||||||| || ||||    
T  28711804 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttttcaacgctctttgaagaacaagcatccaatgccttcaaattca 28711705  T
Q  101 tttgaattagt 111  Q
    || ||| ||||    
T  28711704 ttcgaaatagt 28711694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23184410 - 23184346
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgct 65  Q
    |||||||||||||||||| |||| |||||||| ||||| ||||||||||| ||||||||||||||    
T  23184410 gagacacaaactgagtagaggaggtagtggttctacacttcgtacaattgtactttgtcaacgct 23184346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 24779337 - 24779425
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||| ||||| || |||||||| ||| ||||||| ||||| ||| | ||| ||||| ||||    
T  24779337 gagacacaaactgagtagtggagatagtggttatacacttcatacaattgtactatgtcaacactcttcaaagaacaaacatccgatgc 24779425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 28551024 - 28550932
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||  | ||| |||||||||||||  || |  |||||||||||||||||    
T  28551024 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 28550932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 44840428 - 44840520
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||  | ||| |||||||||||||  || |  |||||||||||||||||    
T  44840428 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 44840520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 20152117 - 20152050
Alignment:
Q  25 tagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||| ||||||||||| |||||||||||||||||  || | |||||||||||||||||    
T  20152117 tagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 20152050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 6574223 - 6574138
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaa-ttggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||| ||||||||||| |||||||||||||| |||||||| ||| |||||||||||||||||  || | ||| |||||||||||||    
T  6574223 aaacagagtagtggaggtagtggttgtacacttcgtacaatttgtactttgtcaacgctctttgaagaacaaacatccaatgcctt 6574138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 26619200 - 26619095
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaat 107  Q
    |||| |||||||||||||||||||||||||| |||||||||||  |||| |||||| |||  ||| |  |||||| ||||||||| || ||| ||||||     
T  26619200 aaacagagtagtggagatagtggttgtacacttcgtacaattgtcctttttcaacgttctccaaagaataagcattcaatgccttcaaattcttttgaaa 26619101  T
Q  108 tagttg 113  Q
    ||||||    
T  26619100 tagttg 26619095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 22776394 - 22776302
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    |||||| |||| ||||| |||||||||||||||||||| ||||||||  | ||| |||||||||||||  || |  |||||||||||||||||    
T  22776394 gagacaaaaacagagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 22776302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 22781772 - 22781680
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    |||||| |||| ||||| |||||||||||||||||||| ||||||||  | ||| |||||||||||||  || |  |||||||||||||||||    
T  22781772 gagacaaaaacagagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 22781680  T

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Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 38781405 - 38781460
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    ||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||    
T  38781405 gagtagtggatgtagtggttgtacacttcgtacaattgtactttgtcaacgctctt 38781460  T

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Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 1587132 - 1587047
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    |||| |||||||||||||||||||||||||| ||||||||  | ||| |||||||||||||  || |   ||||||||||||||||    
T  1587132 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaattagcatccaatgccttt 1587047  T

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Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 44881173 - 44881270
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaattag 110  Q
    |||||||||||||||||||||||||| |||||||||||  |||| ||||| ||||  || ||  || ||||||||||||| ||   ||||||||||||    
T  44881173 gagtagtggagatagtggttgtacacttcgtacaattgtcctttttcaactctctccaacaaaaaaacatccaatgccttcaaacccatttgaattag 44881270  T

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Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 14581525 - 14581601
Alignment:
Q  17 agtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    |||||||||||||||||||||| ||||||||  | ||| |||||||||||||  || |  |||||||||||||||||    
T  14581525 agtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 14581601  T

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Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 22258195 - 22258231
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtaca 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  22258195 gagacacaaactgagtagtggagatagtggttgtaca 22258231  T

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Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 31968149 - 31968061
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||  | | | |||||||||||||  || |  |||||||||||||    
T  31968149 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaatgc 31968061  T

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Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 40332081 - 40332173
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    |||||| |||| ||||| ||||| |||||||||||||| ||||||||  | ||| |||||||||||||  || |  |||||||||||||||||    
T  40332081 gagacaaaaacagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 40332173  T

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Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 30557415 - 30557360
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    ||||||||||| |||||||||||||| ||||||||  | |||||||||||||||||    
T  30557415 gagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt 30557360  T

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Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 33074220 - 33074267
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaat 48  Q
    |||||| |||| |||||||||||||||||||||||||| |||||||||    
T  33074220 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaat 33074267  T

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Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 35744106 - 35744039
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| ||||||||||||||||||||| ||||||||  ||||||||  | ||| |||||||||||||    
T  35744106 gagacaaaaactgagtagtggagatagtagttgtacatttcgtacaaacgtactatgtcaacgctctt 35744039  T

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Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 3277037 - 3277115
Alignment:
Q  14 agtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||||||||||||||||| ||||||||  | ||| | |||||||||||  || |  ||||||||||||||||    
T  3277037 agtagtggagatagtggttgtacacttcgtacaaacgtactatatcaacgctctttgaagaataagcatccaatgcctt 3277115  T

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Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 19115089 - 19115143
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctct 67  Q
    |||||||||||||||||||||||||| |||||||||||  |||| ||||| ||||    
T  19115089 gagtagtggagatagtggttgtacacttcgtacaattgtcctttttcaacactct 19115143  T

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Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 22785749 - 22785669
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    |||||||||||||||||||| ||||| | ||||||  | ||| |||||||||||||  || |  |||||||||||||||||    
T  22785749 gagtagtggagatagtggttatacactttgtacaaaagtactatgtcaacgctctttgaagaataagcatccaatgccttt 22785669  T

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Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 22802461 - 22802521
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||| ||||||||||| |||||||||||||| ||||||||  | ||||||||||| |||||    
T  22802461 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaactctctt 22802521  T

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Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 28701322 - 28701244
Alignment:
Q  14 agtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||| || ||||||||||| ||||||||    ||||||||||||| |||  || | |||||||||||||||||    
T  28701322 agtagtggaggtaatggttgtacacttcgtacaaacttactttgtcaacgccctttgaagaacaagcatccaatgcctt 28701244  T

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Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 18702744 - 18702841
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaattag 110  Q
    |||||||||||||||| |||| | || |||||||||||  ||||  ||||| |||  ||| || ||||||| |||||||| || ||| ||||||||||    
T  18702744 gagtagtggagatagttgttgcatacttcgtacaattgtccttttccaacgttctccaaagagtaagcatctaatgccttcaaattcttttgaattag 18702841  T

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Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 6392634 - 6392694
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||| ||||||||||| |||||||||  ||| ||||||||  | |||||||||||||||||    
T  6392634 aaacagagtagtggaggtagtggttgcgcacttcgtacaaacgtactttgtcaacgctctt 6392694  T

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Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 19498048 - 19498012
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacac 38  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  19498048 agacacaaacagagtagtggaggtagtggttgtacac 19498012  T

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Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 23392750 - 23392686
Alignment:
Q  25 tagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||| ||||||| ||| |||  ||||||||||||  | ||| |||||||||||||    
T  23392750 tagtggttgtacacttcgtacagttgtactaggtcaacgctctttgagaagaaagcatccaatgc 23392686  T

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Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 34322030 - 34321950
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    |||||||| ||||||||||||||||| || |||||  | ||| |||||||||||||  || |  ||| |||||||||||||    
T  34322030 gagtagtgaagatagtggttgtacacttcatacaaacgtactatgtcaacgctctttgaagaataagaatccaatgccttt 34321950  T

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Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 21028792 - 21028902
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    |||||||||||||||||||||||||||||| ||||||| || |||||||| ||||||||| ||||||| ||||||||||||||||||||||| |||||||    
T  21028792 gagacacaaactgagtagtggagatagtggctgtacacttcatacaattgtactttgtcagcgctcttcaaaaagcaagcatccaatgccttcaacttca 21028891  T
Q  101 tttgaattagt 111  Q
    |||||||||||    
T  21028892 tttgaattagt 21028902  T

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Target: chr1; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 26702210 - 26702102
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    |||||||| ||| |||||||||| |||||||||||||| ||||||||||| ||||||||| | ||||| |||||||||| |||||||||||| |||||||    
T  26702210 gagacacatactaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcatcactcttcaaaaagcaagaatccaatgccttcaacttca 26702111  T
Q  101 tttgaatta 109  Q
    |||||||||    
T  26702110 tttgaatta 26702102  T

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Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 22201817 - 22201726
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| | | | |||||||||||||||||    
T  22201817 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcatagaacaagcatccaatgcctt 22201726  T

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Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 28492485 - 28492394
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| || ||| | |||||||||||||||||    
T  28492485 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctattcaaagaacaagcatccaatgcctt 28492394  T

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Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 33256432 - 33256341
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||| ||| | |||||||||||||||||    
T  33256432 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaacaagcatccaatgcctt 33256341  T

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Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 33276604 - 33276513
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||| ||| | |||||||||||||||||    
T  33276604 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaacaagcatccaatgcctt 33276513  T

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Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1577866 - 1577954
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||  ||||||||||||||||||||| | ||||||||||||||    
T  1577866 gagacacaaactgagtagtggagatagtggttgtacacttagtacaattatactttgtcaacgctcttaaaagaacaagcatccaatgc 1577954  T

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Target: chr1; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21191946 - 21191837
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||| |||||||||| ||| | ||||||||||||||||| || | |     
T  21191946 gagacacaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgccaacgctcttcaaagaacaagcatccaatgccttcaaatcct 21191847  T
Q  101 tttgaattag 110  Q
    ||||||||||    
T  21191846 tttgaattag 21191837  T

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Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 22600263 - 22600172
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||  || | |||||||||||||||||    
T  22600263 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 22600172  T

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Target: chr1; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 10757420 - 10757508
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||| ||| | ||| ||||||||||    
T  10757420 gagacacaaactgagtagtgaagatagtggttgtacacttcgtacaattgtactttgtcaatgctcttcaaagaacaatcatccaatgc 10757508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12284422 - 12284510
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||| |||||||||||||| |||||||| ||||||||||| ||| ||||||||||||| ||| | ||||||||||||||    
T  12284422 gagacacaaactgattagtggagatagtgtttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 12284510  T

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Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 32786018 - 32785927
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| ||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||  || | |||||||||||||||||    
T  32786018 gagacaaaaacatagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttttaagaacaagcatccaatgcctt 32785927  T

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Target: chr1; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 20954554 - 20954466
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||| ||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||| |  |||| ||||||||    
T  20954554 gagaaacaaactgagtagtggagatagtggttgtacacttggtacaattgtactttgtcaacgctcttcaaagaataagcctccaatgc 20954466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22153856 - 22153944
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| ||| | ||| ||||||||||    
T  22153856 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaatcatccaatgc 22153944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 36134189 - 36134277
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||  || | ||||||||||||||    
T  36134189 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgc 36134277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 19717523 - 19717614
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||| | |||||| |||| ||||||||| ||||||||||| ||||||||||||||||| ||| | ||||||||| |||||||    
T  19717523 gagacacaaactgatttgtggagttagttgttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccgatgcctt 19717614  T

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Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 38282566 - 38282659
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaa 95  Q
    |||||| |||| ||||||||||||||||||||||| || ||||||||||| |||||||||||||||||  || | ||||||| ||||||||||||    
T  38282566 gagacaaaaacagagtagtggagatagtggttgta-acttcgtacaattgtactttgtcaacgctctttgaagaacaagcattcaatgcctttaa 38282659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 12613895 - 12613807
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    ||||||||||| |||||||| || |||||||||||||| ||||||||||| |||||| |||||||||| ||| | |||||| |||||||    
T  12613895 gagacacaaacagagtagtgaaggtagtggttgtacacttcgtacaattgtactttgccaacgctcttcaaagaacaagcaaccaatgc 12613807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 39201066 - 39200986
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatg 88  Q
    |||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||  || | |||||||||||||    
T  39201066 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatg 39200986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 22427438 - 22427347
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| ||||  |||||||||| |||||||||||||| ||||||||||| |||||||||||||| ||  || | |||||||||||||||||    
T  22427438 gagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgcttttttaagaacaagcatccaatgcctt 22427347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 48704203 - 48704294
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| ||| ||||||||||||| | ||||||||||| ||||||||||| |||||||||||| |||| ||| | |||||||||| ||||||    
T  48704203 gagacataaattgagtagtggagacattggttgtacacttcgtacaattgtactttgtcaacgttcttcaaagaacaagcatccagtgcctt 48704294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 1900344 - 1900438
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaa 95  Q
    |||||| |||| ||||||||||| |||||||||||||| || ||||| || |||||||||||||||||  || | ||||||| ||||||||||||    
T  1900344 gagacaaaaacagagtagtggaggtagtggttgtacacttcttacaactgtactttgtcaacgctctttgaagaacaagcattcaatgcctttaa 1900438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 30893091 - 30893173
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatc 83  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| ||||| |||| || ||| | ||||||||    
T  30893091 gagacacaaacttagtagtggagatagtggttgtacacttcgtacaattgtactatgtcagcgctattcaaagaacaagcatc 30893173  T

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Target: chr1; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 35401821 - 35401899
Alignment:
Q  14 agtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||| |||||||||||||| | ||||||||| |||||||||||||||||  || | |||||||||||||||||    
T  35401821 agtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 35401899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 35040165 - 35040253
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||  | |||||||||||||||||  || | ||||||||||||||    
T  35040165 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagatcaagcatccaatgc 35040253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 46088988 - 46089080
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||  | ||| |||||||||||||  || |  |||||||||||||||||    
T  46088988 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 46089080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 48570312 - 48570220
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||  | ||| |||||||||||||  || |  |||||||||||||||||    
T  48570312 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 48570220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2268530 - 2268597
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| ||||||| ||| |||||||||||||| ||||||||||| |||||||||||||||||    
T  2268530 gagacaaaaacagagtagtcgaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt 2268597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 22464878 - 22464799
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||| |||||| ||||||| ||||||| ||| |||||||||||||||||  || | |||||||||||||||||    
T  22464878 gagtagtggaggtagtggatgtacacttcgtacacttgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 22464799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 25448647 - 25448556
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||  | |||||||||||||||||  || |  ||||||||||||||||    
T  25448647 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaataagcatccaatgcctt 25448556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 29215796 - 29215887
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| ||||| |||||||| ||||||||||| ||||||| | |||||||  || | |||||||||||||||||    
T  29215796 gagacaaaaacagagtagtggagctagtgattgtacacttcgtacaattgtactttgttatcgctctttgaagaacaagcatccaatgcctt 29215887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 17025029 - 17024935
Alignment:
Q  17 agtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaattagt 111  Q
    ||||||| |||||||||||||| |||||||||||   ||| ||||||||||| ||| | ||||||||||||||||| || | | |||||||||||    
T  17025029 agtggaggtagtggttgtacacttcgtacaattgtcatttttcaacgctctttaaagaacaagcatccaatgccttcaaatccttttgaattagt 17024935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 30572203 - 30572263
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||| |||||||||||||||||||||||||| ||||||||| | ||| |||||||||||||    
T  30572203 aaacagagtagtggagatagtggttgtacacttcgtacaatcgtactatgtcaacgctctt 30572263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 2267088 - 2267179
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| ||||  |||||||||| |||||||||||||| || |||||||| |||||| ||||||||||  || | ||| |||||||||||||    
T  2267088 gagacaaaaacatagtagtggaggtagtggttgtacacttcatacaattgcactttgacaacgctctttgaagaacaaacatccaatgcctt 2267179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 21702813 - 21702880
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||  | ||| |||||||||||||    
T  21702813 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 21702880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 2834701 - 2834780
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||  ||||||||||||  ||||||||| | |||||||||||| ||||  || | |||||||||||||||||    
T  2834701 gagtagtggaggcagtggttgtacaattcgtacaatcgtactttgtcaacgttctttgaagaacaagcatccaatgcctt 2834780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 16235365 - 16235310
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    ||||||||||| |||| ||||||||| ||||||||||| ||||||||||| |||||    
T  16235365 gagtagtggaggtagttgttgtacacttcgtacaattgtactttgtcaacactctt 16235310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19215611 - 19215676
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctc 66  Q
    |||||| |||| |||||||| ||||||||||||||||| |||||||||   ||| |||||||||||    
T  19215611 gagacaaaaacagagtagtgcagatagtggttgtacacttcgtacaatcacactatgtcaacgctc 19215676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23024787 - 23024852
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctc 66  Q
    |||||| |||| |||||||| ||||||||||||||||| ||||||||  | ||| |||||||||||    
T  23024787 gagacaaaaacagagtagtgcagatagtggttgtacacttcgtacaaacgcactatgtcaacgctc 23024852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 18896665 - 18896569
Alignment:
Q  14 agtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaattag 110  Q
    |||||||||| |||||||||||||| |||||||| ||  ||||  ||||| |||  ||| |  |||||||||||||||| || ||| ||||||||||    
T  18896665 agtagtggaggtagtggttgtacacttcgtacaactgtccttttccaacgttctccaaagactaagcatccaatgccttcaaattcttttgaattag 18896569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21121145 - 21121057
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||| |||| ||||||||||  |||||||||||||| ||||||||  | ||| |||||||||||||  || |  |||||||||||||    
T  21121145 gagacaaaaacagagtagtggaagtagtggttgtacacgtcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 21121057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 2327509 - 2327454
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    ||||||||||| |||||||||||||| ||||||||  | |||||||||| ||||||    
T  2327509 gagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctctt 2327454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10250985 - 10251076
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| |||||||||||||| ||||||||||| ||||||||  | ||| ||||||  |||||  || |  ||||||||||||||||    
T  10250985 gagacaaaaacagagtagtggagataatggttgtacacttcgtacaaacgtactatgtcaaaactctttgaagaataagcatccaatgcctt 10251076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 44821626 - 44821559
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| |||||||||||||||| ||||||||| ||||||||  | ||| ||||||| |||||    
T  44821626 gagacaaaaacagagtagtggagatagtagttgtacacttcgtacaaacgtactatgtcaacactctt 44821559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 23036595 - 23036521
Alignment:
Q  14 agtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatg 88  Q
    ||||| |||| |||||||||||||| |||||||||||  ||||||  ||||||||  || | |||||||||||||    
T  23036595 agtagaggaggtagtggttgtacacttcgtacaattgttctttgttgacgctctttgaagaacaagcatccaatg 23036521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 42284642 - 42284715
Alignment:
Q  16 tagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||| |||||||||||||| ||||||||  | ||| |||||||||||||  || |  |||||||||||||    
T  42284642 tagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaaaaagcatccaatgc 42284715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 14263525 - 14263465
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||| ||||||||||| |||||||||||||| ||||||||  |  ||||| ||||||||||    
T  14263525 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtgctttgccaacgctctt 14263465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21135241 - 21135153
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||| |||| ||||||||||  |||||||||||||| ||||||||  | ||| ||||||| |||||  || |  |||||||||||||    
T  21135241 gagacaaaaacagagtagtggatttagtggttgtacacttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgc 21135153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 21204997 - 21204937
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||| ||||||||||  |||||||||||||| ||||||||  | ||| |||||||||||||    
T  21204997 aaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 21204937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 21984607 - 21984683
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    ||||||||||  |||||||||||||| ||||||||  | ||| |||||||||||||  || |  |||||||||||||    
T  21984607 gagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 21984683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 13018666 - 13018565
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcat 101  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| | ||||||||||||||| ||||||||    
T  13018666 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaatccagcatccaatgccttcaacttcat 13018567  T
Q  102 tt 103  Q
    ||    
T  13018566 tt 13018565  T

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Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 39284726 - 39284616
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| ||| | ||| ||||||||||||| || ||||    
T  39284726 gagacacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaaacatccaatgccttcaaattca 39284627  T
Q  101 tttgaattagt 111  Q
    |||||||||||    
T  39284626 tttgaattagt 39284616  T

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Target: chr7; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 2913770 - 2913679
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  2913770 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 2913679  T

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Target: chr7; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 15088516 - 15088603
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatg 88  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| | |||||||||||||    
T  15088516 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaacaagcatccaatg 15088603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 41842435 - 41842325
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||||| ||| ||||||||| ||| ||||| |||| |||||||| ||| |||||||    
T  41842435 gagacacaaactgagtagtgcaggtagtggttgtacacttcgtacaattgtactctgtcaacgcactttaaaaaacaagtatccaatgtcttcaacttca 41842336  T
Q  101 tttgaattagt 111  Q
    |||||||||||    
T  41842335 tttgaattagt 41842325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13730837 - 13730749
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||| | ||||||||||||||    
T  13730837 gagacacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 13730749  T

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Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13138057 - 13137966
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  13138057 gagacataaactgagtaatggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 13137966  T

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Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 16310069 - 16309978
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | |||||||||||||||||    
T  16310069 gagacacaaactgagtagtgtagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgcctt 16309978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21692283 - 21692374
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  21692283 gagacacaaactgagtagtggaggtagtggttgtacacttcatacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 21692374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 30025901 - 30025992
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||||||||||||||||||| | |||||||| ||||||||    
T  30025901 gagacacaaactgagtagtagagatattggttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaacaagcatcgaatgcctt 30025992  T

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Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 13648725 - 13648819
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaa 95  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | ||||||||||||| ||||||    
T  13648725 gagacacaaattgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagatcaagcatccaatgtctttaa 13648819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 11319401 - 11319489
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| | ||||||||||||||| ||||| || |||||||||||    
T  11319401 gagacacaaactgagtagtggagatagtggttgtacacttcgtgcaattgtaatttgtcaacgctcttcaaaaaacacgcatccaatgc 11319489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 29935520 - 29935432
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | ||||||||||||||    
T  29935520 gagacacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctctttaaagaacaagcatccaatgc 29935432  T

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Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13302806 - 13302897
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||||||||||||| |||||||||||||||| | ||||||||| ||||||||||||||||| ||| | |||||||| ||||||||    
T  13302806 gagacacaaactgagtagtggtgatagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgcctt 13302897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13880100 - 13880191
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |  ||||||| ||||||||    
T  13880100 gagacacaaagtgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaataagcatctaatgcctt 13880191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 16112046 - 16111955
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||  || | |||||||||||||||||    
T  16112046 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 16111955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 16316719 - 16316632
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatg 88  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| | ||||||||||| ||| | |||||||||||||    
T  16316719 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatttcaacgctcttcaaagaacaagcatccaatg 16316632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 21695397 - 21695488
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||||||||||| ||| || ||||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  21695397 gagacacaaactgagtagttgaggtactggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 21695488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5000984 - 5000896
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||| |||| ||| | ||||||| ||||||    
T  5000984 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgttcttcaaagaacaagcattcaatgc 5000896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 11792903 - 11792991
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||| ||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||| |||||    
T  11792903 gagacacaaactaagtggtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatcaaatgc 11792991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 23280113 - 23280029
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||  || | |||||||||||||||||    
T  23280113 aaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 23280029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 10883335 - 10883244
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||| ||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||| ||| | || ||||||||||||||    
T  10883335 gagacgcaaactgagtagtggaggtagtgattgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaggcatccaatgcctt 10883244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 13032213 - 13032122
Alignment:
Q  22 agatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaattagttg 113  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||||| ||||||| |||||| |||| ||| ||||||||||||| ||||||    
T  13032213 agatagtggttgtacacttcgtacaattatactttgtcaacgctcttcaaaaagccagcatctaatgtcttcaacttcatttgaaatagttg 13032122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 21283535 - 21283444
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||  || | |||||||||||||||||    
T  21283535 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaataacaagcatccaatgcctt 21283444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 44467060 - 44467151
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||| ||||| ||| | |||||||||||||||||    
T  44467060 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacactctttaaagaacaagcatccaatgcctt 44467151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 28409035 - 28409126
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||  || | ||| |||||||||||||    
T  28409035 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgcctt 28409126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 9069558 - 9069652
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaa 95  Q
    |||||| |||||||||||||||| |||||||||||||| ||||||||||| |||||||||| |||| |  || | ||||||| ||||||||||||    
T  9069558 gagacaaaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaatgctccttgaagaacaagcatacaatgcctttaa 9069652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 19237204 - 19237114
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||| ||||||||||| |||||||||||||| ||||| ||||| | |||||||||||||||  || | |||||||||||||||||    
T  19237204 agacacaaacagagtagtggaggtagtggttgtacacttcgtataattgtagtttgtcaacgctctttgaagaacaagcatccaatgcctt 19237114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 2500034 - 2500122
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||| ||||||||||||| | ||||||||| ||||||||||| ||||| |||    |||||||||||||    
T  2500034 gagacacaaactgagtagtggagaaagtggttgtacactttgtacaattgtactttgtcaactctcttcaaaggataagcatccaatgc 2500122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13260777 - 13260689
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||| | |||| ||||||  || | ||||||||||||||    
T  13260777 gagacacaaactgggtagtggagatagtggttgtacacttcgtacaattgtactatctcaatgctcttccaagaacaagcatccaatgc 13260689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 15467924 - 15468003
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||| || ||||||||||| ||||||||||| |||||||||||||||||  || | |||||||||||||||||    
T  15467924 gagtagtggaggtaatggttgtacacctcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 15468003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22578183 - 22578116
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||    
T  22578183 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt 22578116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 30944485 - 30944394
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||||| | |||||||||||||||  || |  ||||||||||||||||    
T  30944485 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtattttgtcaacgctctttgaagaataagcatccaatgcctt 30944394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 30945518 - 30945427
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| ||||  |||||||||| |||||||||||||| ||||||||||| |||||||||||||||||  |  | |||||||||||||||||    
T  30945518 gagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaggaacaagcatccaatgcctt 30945427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 33691874 - 33691780
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaa 95  Q
    |||||| |||| ||||||||||| |||||||| ||||| ||||||||||| |||||||||||||||||  || | |||||||| || ||||||||    
T  33691874 gagacaaaaacagagtagtggaggtagtggttatacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatctaacgcctttaa 33691780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 331641 - 331705
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgct 65  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||| ||| ||||||||||||||    
T  331641 gagacacaaactgtgtagtggaggtagtggttgtacacttcgtacatttgtactttgtcaacgct 331705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 1293026 - 1293118
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||  | ||| |||||||||||||  || |  |||||||||||||||||    
T  1293026 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 1293118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4821470 - 4821561
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||  | ||||| |||||||||||  || | |||||||||||||||||    
T  4821470 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttttcaacgctctttgaagaacaagcatccaatgcctt 4821561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 14426543 - 14426634
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| | ||||||  | |||||||||||||||||  || | |||||||||||||||||    
T  14426543 gagacaaaaacagagtagtggaggtagtggttgtacacttagtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 14426634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 24788137 - 24788228
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||  |||||  || | |||||| ||||||||||    
T  24788137 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaattctctttgaagaacaagcacccaatgcctt 24788228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 28622518 - 28622427
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||| ||| ||| |||||||||||||| ||||||||||| ||||||||||||| |||  |||| ||| |||||||||||||    
T  28622518 gagacaaaaacagagaagtagaggtagtggttgtacacctcgtacaattgtactttgtcaacgccctttgaaaaacaaacatccaatgcctt 28622427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 33605681 - 33605772
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| ||||  ||||||| || |||||||||||||| ||||||||| | |||||||||||||||||  || | |||||||||||||||||    
T  33605681 gagacaaaaacatagtagtgaaggtagtggttgtacacttcgtacaatcgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 33605772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 48237064 - 48236997
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| ||||  |||||||||| |||||||||||||| ||||||||||| |||||||||||||||||    
T  48237064 gagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt 48236997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 12366910 - 12366822
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||| ||||| |||||||| ||||||||||| || ||||||||||| ||| ||||||||||||| ||| | ||  ||||||||||    
T  12366910 gagacacagactgattagtggaggtagtggttgtatacttcgtacaattgtactatgtcaacgctcttcaaagaacagacatccaatgc 12366822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 14193110 - 14193201
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||| ||| |||||||||||||| ||||||| ||| ||||||| |||||||||  || | ||||||| |||||||||    
T  14193110 gagacaaaaacagagtagtagaggtagtggttgtacacttcgtacacttgtactttgttaacgctctttgaagaacaagcattcaatgcctt 14193201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 48062982 - 48062890
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    |||||| |||| ||||| |||||||||||||||||| | ||||||||  | ||| |||||||||||||  || |  |||||||||||||||||    
T  48062982 gagacagaaacagagtaatggagatagtggttgtacgcttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 48062890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 13692372 - 13692439
Alignment:
Q  26 agtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    ||||||||||||| ||||||||||| ||||||||||| ||||  ||| | ||||||||||||| ||||    
T  13692372 agtggttgtacacttcgtacaattgtactttgtcaacactctataaagatcaagcatccaatgtcttt 13692439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 14425444 - 14425531
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||  | | | |||||||||||||  || |  |||||||||||||    
T  14425444 agacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtaatatgtcaacgctctttgaagaataagcatccaatgc 14425531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19711175 - 19711108
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| |||||||||| ||||||||||||||| ||||||||  | |||||||||| ||||||    
T  19711175 gagacaaaaacagagtagtggaaatagtggttgtacacttcgtacaaacgtactttgtcaatgctctt 19711108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 35952850 - 35952783
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| ||||| ||||| |||||||||||||| ||||||||  | |||||||||||||||||    
T  35952850 gagacaaaaacagagtaatggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt 35952783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8182926 - 8182971
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtaca 46  Q
    |||||| |||| |||||||||||||||||||||||||| |||||||    
T  8182926 gagacaaaaacagagtagtggagatagtggttgtacacttcgtaca 8182971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 19339400 - 19339324
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    ||||||||||| |||||||||||||| ||||||||  | ||| |||||||||||||  || |  |||||||||||||    
T  19339400 gagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 19339324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 27871714 - 27871778
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgct 65  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||  | ||| ||||||||||    
T  27871714 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgct 27871778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 9709964 - 9709873
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||| ||||||  |||||||| ||||| ||||||| ||| ||| |||||||||||||  || | |||||||| ||||||||    
T  9709964 gagacaaaaacagagcagtggatgtagtggttttacacttcgtacagttgtactatgtcaacgctctttgaagaacaagcatctaatgcctt 9709873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 13880608 - 13880695
Alignment:
Q  25 tagtggttgtac-acatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaattagt 111  Q
    |||||||||||| || |||||||||||  |||| ||||||||||| ||| | |||||||||| |||||| || | | |||||||||||    
T  13880608 tagtggttgtaccacttcgtacaattgtcctttttcaacgctcttcaaagaacaagcatccagtgccttcaaatccttttgaattagt 13880695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 13894153 - 13894051
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaat 107  Q
    |||| ||||||||||| |||||||||||||| | |||||||||  |||| |||| ||| || ||| | ||| ||| ||||||||| || | | |||||||    
T  13894153 aaacagagtagtggaggtagtggttgtacacgttgtacaattgtcctttttcaatgctttttaaagaacaaacattcaatgccttcaaatccttttgaat 13894054  T
Q  108 tag 110  Q
    |||    
T  13894053 tag 13894051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 9098384 - 9098299
Alignment:
Q  25 tagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaattag 110  Q
    |||||||||||||| |||||||||||  |||| ||||||||||| ||| | ||| |||| ||||| || || | | ||||||||||    
T  9098384 tagtggttgtacacttcgtacaattgtcctttttcaacgctcttcaaagaacaaacatctaatgcattcaaatccttttgaattag 9098299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 2265674 - 2265614
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||| ||| ||||||| |||||||||||||| ||||||||  | ||| |||||||||||||    
T  2265674 aaacagagcagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 2265614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24794877 - 24794813
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgct 65  Q
    |||||| |||| ||||||||||  |||||||||||||| ||||||||  | ||| ||||||||||    
T  24794877 gagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgct 24794813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 5801 - 5710
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||| | |||||||||||||||||    
T  5801 gagacacaaactgagtagtggagatagtagttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaacaagcatccaatgcctt 5710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 12757922 - 12757831
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  12757922 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 12757831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 602879 - 602791
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | ||||||||||||||    
T  602879 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 602791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 39693527 - 39693615
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | ||||||||||||||    
T  39693527 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 39693615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 19156188 - 19156279
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  19156188 gagacacaaactgagtagtggagatagtggttgtacatttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 19156279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 43644888 - 43644997
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    ||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||| | ||||||||| ||| | ||||||||||||||||| || ||||    
T  43644888 gagacacaaaccgagtagtggaggtagtggttgtacacttcgtacaattgtactttattaacgctcttcaaagaacaagcatccaatgccttcaaattca 43644987  T
Q  101 tttgaattag 110  Q
    ||||||||||    
T  43644988 tttgaattag 43644997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 16188976 - 16189067
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| || |  ||||||||||||||||    
T  16188976 gagacacatactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttagaagaataagcatccaatgcctt 16189067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 24646330 - 24646420
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcct 91  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| ||| |  |||||||||||||||    
T  24646330 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacactcttcaaagaataagcatccaatgcct 24646420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 18321318 - 18321229
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcc 90  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||| ||| ||| | |||||||||||||||    
T  18321318 gagacacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaacaagcatccaatgcc 18321229  T

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Target: chr8; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 17525888 - 17525800
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||| ||||||||||||||||| | ||||||||| ||||||||||||||||| ||| | ||||||||||||||    
T  17525888 gagacacaaactgagtagtgaagatagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 17525800  T

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Target: chr8; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 18679807 - 18679895
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | ||||||||||||||    
T  18679807 gagacacaaactgagtagtagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 18679895  T

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Target: chr8; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 18718993 - 18719081
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| || |||||||||| ||| | ||||||||||||||    
T  18718993 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgacaacgctcttcaaagaacaagcatccaatgc 18719081  T

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Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 16207298 - 16207389
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||  || | |||||||||||||||||    
T  16207298 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 16207389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19707498 - 19707607
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    |||||||||||||||||| |||  |||||||||||||| ||||||||||| |||||||||||| |||| ||| | ||| ||| ||||||||| || ||||    
T  19707498 gagacacaaactgagtagaggatgtagtggttgtacacttcgtacaattgtactttgtcaacgttcttcaaagaacaaccattcaatgccttcaaattca 19707597  T
Q  101 tttgaattag 110  Q
    ||||||||||    
T  19707598 tttgaattag 19707607  T

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Target: chr8; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 17441966 - 17441878
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||| ||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||| |  |||||||||||||    
T  17441966 gagacacaaaatgagtagtggagatagtggttgtacacttagtacaattgtactttgtcaacgctcttcaaagaataagcatccaatgc 17441878  T

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Target: chr8; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 29693307 - 29693395
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||||| ||| | ||||||| ||||||    
T  29693307 gagacacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaaagctcttcaaagaacaagcatacaatgc 29693395  T

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Target: chr8; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 16681462 - 16681371
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||||||||| | |||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | |||||||| ||||||||    
T  16681462 gagacacaaactgagtactagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatctaatgcctt 16681371  T

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Target: chr8; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17797414 - 17797505
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||  || | |||||||||||||||||    
T  17797414 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 17797505  T

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Target: chr8; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17914451 - 17914542
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||| ||||| ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||| | |||||||| ||||||||    
T  17914451 gagaaacaaattgagtagtggagatagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgcctt 17914542  T

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Target: chr8; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 21932875 - 21932969
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaa 95  Q
    |||||| | |||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||  |||| ||||||| ||||||||||||    
T  21932875 gagacaaacactgagtagtggaggtagtggttgtacacttcgtacaattttactttgtcaacgctctttgaaaaacaagcatacaatgcctttaa 21932969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 20382553 - 20382469
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatcca 85  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | ||| ||||||    
T  20382553 gagacacaaactgattagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaaacatcca 20382469  T

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Target: chr8; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 17267466 - 17267554
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||| ||| |||||| |||||| ||| | |||||||| |||||    
T  17267466 gagacaaaaactgagtagtggagatagtggttgtacaattcgtacaattgtactatgtcaatgctcttcaaagaacaagcatctaatgc 17267554  T

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Target: chr8; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 18685549 - 18685465
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||| |||||||||||||||||||||||||| ||||||||||| | ||| ||||||||||| |||||  ||||||| ||||||||    
T  18685549 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgcctt 18685465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 18722798 - 18722714
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||| |||||||||||||||||||||||||| ||||||||||| | ||| ||||||||||| |||||  ||||||| ||||||||    
T  18722798 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgcctt 18722714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 18731143 - 18731059
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||| |||||||||||||||||||||||||| ||||||||||| | ||| ||||||||||| |||||  ||||||| ||||||||    
T  18731143 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgcctt 18731059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17701737 - 17701828
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||||||||||||||| ||||||||||| || ||||||||||  |||||| |||||||||||||  |   |||||||||||||||    
T  17701737 gagacacaaactgagtagtggaggtagtggttgtaaacttcgtacaattatactttgccaacgctcttaaaggaattagcatccaatgcctt 17701828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 23185385 - 23185294
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||| ||||||| |||||||||||||| ||||||||||| |||||||||||||||||  || |  ||||||||||||||||    
T  23185385 gagacaaaaacagagcagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataagcatccaatgcctt 23185294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 33082873 - 33082940
Alignment:
Q  25 tagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  33082873 tagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 33082940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 40845546 - 40845455
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||| | ||| |||||||||||||  || |  ||||||||||||||||    
T  40845546 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaatcgtactatgtcaacgctctttgaagaataagcatccaatgcctt 40845455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 25164062 - 25164129
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| || |||| |||||    
T  25164062 gagacacaaattgagtagtggagatagtggttgtacacttcgtacaattgtactatgacaacactctt 25164129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 30421588 - 30421496
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt--aaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| ||||||||||| || |||||||| || |||||||||||||||||  |||| | |||||||||||||||||    
T  30421588 gagacaaaaacagagtagtggaggtagtggttgtaaacttcgtacaa-tgtactttgtcaacgctctttgaaaagaacaagcatccaatgcctt 30421496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 19943234 - 19943319
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgc-tcttaaaaaagcaagcatccaatgcctt 92  Q
    |||| ||||||||||| |||||||||||||| ||||||||||  ||||||||||||| | |||||  | |||||||||||||||||    
T  19943234 aaacagagtagtggaggtagtggttgtacacttcgtacaattttactttgtcaacgctttttaaaggaacaagcatccaatgcctt 19943319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 23263757 - 23263680
Alignment:
Q  15 gtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||| |||||||||||||| |||||||| || |||||||||||||||||  || | ||| |||||||||||||    
T  23263757 gtagtggaggtagtggttgtacacttcgtacaactgtactttgtcaacgctctttgaagaacaaacatccaatgcctt 23263680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 14989610 - 14989519
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| |||||||||||||||||||||||||  ||||||||  | ||| |||||||||||||  || |  ||||||||||||||||    
T  14989610 gagacaaaaacagagtagtggagatagtggttgtacaattcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctt 14989519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 15336246 - 15336180
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    ||||| |||| ||||||||||| |||||||||||||| ||||||||  | |||||||||||||||||    
T  15336246 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt 15336180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 15425311 - 15425245
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    ||||| |||| ||||||||||| |||||||||||||| ||||||||  | |||||||||||||||||    
T  15425311 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt 15425245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 15516615 - 15516549
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    ||||| |||| ||||||||||| |||||||||||||| ||||||||  | |||||||||||||||||    
T  15516615 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt 15516549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 9320567 - 9320627
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||| ||||||||||| |||||||||||||| |||||||| |  |||||||||||||||||    
T  9320567 aaacagagtagtggaggtagtggttgtacacttcgtacaaatatactttgtcaacgctctt 9320627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6407718 - 6407785
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| |||||||||||||||||||||||||| ||||| ||  | ||| |||||||||||||    
T  6407718 gagacaaaaacagagtagtggagatagtggttgtacacttcgtagaaacgtactatgtcaacgctctt 6407785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 18151805 - 18151714
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| |||||||||||||||||||||||||  ||||||||  | ||| |||||| ||||||  || |  ||||||||||||||||    
T  18151805 gagacaaaaacagagtagtggagatagtggttgtacaattcgtacaaacgtactatgtcaatgctctttgaagaataagcatccaatgcctt 18151714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22673770 - 22673837
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| ||||  ||||||||||||||||||||||||| ||||||||  | ||| |||||||||||||    
T  22673770 gagacaaaaacaaagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 22673837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 24551266 - 24551357
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| ||||  |||||||||| |||||||||||||| ||||||||  | ||| ||| |||||||||  || | |||||||||||||||||    
T  24551266 gagacaaaaacaaagtagtggaggtagtggttgtacacttcgtacaaacgtactatgttaacgctctttgaagaacaagcatccaatgcctt 24551357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 45538598 - 45538511
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatg 88  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||  |   |||||||||||||||  || | |||||||||||||    
T  45538598 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtgatttgtcaacgctctttgaagaacaagcatccaatg 45538511  T

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Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 18121265 - 18121174
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaa 95  Q
    |||||| |||| ||||||| ||| |||||||   |||| ||||||||||| ||||||| || ||||||  || | ||||||||||||||||||||    
T  18121265 gagacagaaacagagtagttgaggtagtggt---acacttcgtacaattgtactttgttaatgctctttgaagaacaagcatccaatgcctttaa 18121174  T

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Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 22461783 - 22461687
Alignment:
Q  15 gtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaattagt 111  Q
    |||||||||||||||||||| |||  ||||||||||  |||| ||||| ||||  ||  |  |||||||||||||||| || | |||||||||||||    
T  22461783 gtagtggagatagtggttgtgcactccgtacaattgtcctttttcaactctctccaacgaataagcatccaatgccttcaaatccatttgaattagt 22461687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 1237641 - 1237696
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    ||||||||||| |||||||||||||| ||| ||||  | |||||||||||||||||    
T  1237641 gagtagtggaggtagtggttgtacacttcgcacaaaagtactttgtcaacgctctt 1237696  T

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Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 22663120 - 22663175
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||||||||||| ||||||||||| ||||||||  | ||| |||||||||||||    
T  22663120 gagtagtggagatattggttgtacacttcgtacaaacgtactatgtcaacgctctt 22663175  T

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Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 7018454 - 7018418
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacac 38  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  7018454 agacacaaacagagtagtggaggtagtggttgtacac 7018418  T

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Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 20259690 - 20259654
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacac 38  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  20259690 agacacaaacagagtagtggaggtagtggttgtacac 20259654  T

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Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 21046320 - 21046284
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacac 38  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  21046320 agacacaaacagagtagtggaggtagtggttgtacac 21046284  T

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Target: chr3 (Bit Score: 69; Significance: 4e-31; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 41495001 - 41495089
Alignment:
Q  4 acacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  41495001 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 41495089  T

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Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13780744 - 13780653
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  13780744 gagacacaaactgagtcgtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaataacaagcatccaatgcctt 13780653  T

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Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 37467332 - 37467423
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  37467332 gagacacaaactgggtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 37467423  T

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Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 49642922 - 49642831
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||| | ||| |||||||||||||    
T  49642922 gagacacaaactgagtagtggagatagtggttgtacactttgtacaattgtactttgtcaacgctcttaaaagaacaatcatccaatgcctt 49642831  T

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Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 14393164 - 14393076
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | ||||||||||||||    
T  14393164 gagacacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 14393076  T

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Target: chr3; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 20646153 - 20646241
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||| ||| | ||||||||||||||    
T  20646153 gagacacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 20646241  T

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Target: chr3; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 12963245 - 12963157
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||| ||| | ||||||||||||||    
T  12963245 gagacacatactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacactcttcaaagaacaagcatccaatgc 12963157  T

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Target: chr3; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13948335 - 13948426
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||| ||||||| |||||||| ||||||||||| ||||||||||| ||| ||||||||||||| ||| | |||||||||||||||||    
T  13948335 gagacacaacctgagtaatggagataatggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgcctt 13948426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 16032524 - 16032615
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||| ||| | |||||||||||||||||    
T  16032524 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaatgctcttcaaagaacaagcatccaatgcctt 16032615  T

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Target: chr3; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 22804183 - 22804092
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||| ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||| | ||| |||| ||||||||    
T  22804183 gagacacaaattgagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgctcttcaaagaacaatcatcgaatgcctt 22804092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 31303385 - 31303452
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||    
T  31303385 gagacacaaactgagtagtggagatagttgttgtacacttcgtacaattgtactttgtcaacgctctt 31303452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 38177791 - 38177712
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  38177791 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttaaagaacaagcatccaatgcctt 38177712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 12389032 - 12388922
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    |||||| |||| ||||||||||| |||||||||||||| |||||||||||  ||||| |||||||||| ||| |  |||||||||||||||| || |||     
T  12389032 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtcctttgccaacgctcttcaaagaagaagcatccaatgccttaaaattct 12388933  T
Q  101 tttgaattagt 111  Q
    |||||||||||    
T  12388932 tttgaattagt 12388922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 28582105 - 28582199
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaa 95  Q
    |||||| |||||||||||||||| |||||||||||||| ||||||||||| | |||||||||||||||  || | ||||||||||||||| ||||    
T  28582105 gagacaaaaactgagtagtggaggtagtggttgtacacttcgtacaattgtattttgtcaacgctctttgaagaacaagcatccaatgccattaa 28582199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 47207706 - 47207796
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||| |||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||  || | |||||||||||||||||    
T  47207706 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 47207796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 17239082 - 17238994
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||| ||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||| || ||| | ||| ||||||||||    
T  17239082 gagatacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctattcaaagaacaatcatccaatgc 17238994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15903197 - 15903264
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||    
T  15903197 gagacacaaactgagtagtggagatagttgttgtacacttcgtacaattgtactttgtcaatgctctt 15903264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 29951598 - 29951507
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||| |||||||||| ||||||||||||||||||||| | ||||||||| ||||||| ||| ||||| ||| | |||||||||||||||||    
T  29951598 gagactcaaactgagtggtggagatagtggttgtacactttgtacaattgtactttgttaactctcttcaaagaacaagcatccaatgcctt 29951507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 30000752 - 30000661
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||| |||||||||| ||||||||||||||||||||| | ||||||||| ||||||| ||| ||||| ||| | |||||||||||||||||    
T  30000752 gagactcaaactgagtggtggagatagtggttgtacactttgtacaattgtactttgttaactctcttcaaagaacaagcatccaatgcctt 30000661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16658778 - 16658690
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||||||| | | ||||||||||||| ||| |  |||||||||||||    
T  16658778 gagacacaaactaagtagtggaggtagtggttgtacacttcgtacaattgtattatgtcaacgctcttcaaagaataagcatccaatgc 16658690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 6090731 - 6090822
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||||| |||||||||| ||| || ||| | ||||||| |||||||||    
T  6090731 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaaagctttttaaagaacaagcattcaatgcctt 6090822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 40799873 - 40799940
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||    
T  40799873 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt 40799940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 11223569 - 11223653
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||| |||||||||||||||||||||||||| ||||||||    |||||||||||||||||  || | |||||||||||||||||    
T  11223569 aaacagagtagtggagatagtggttgtacacttcgtacaaacatactttgtcaacgctctttgaagaacaagcatccaatgcctt 11223653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 12726390 - 12726302
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||| |||| ||||||||||| |||||||||||||| | ||||||||| ||||||| ||| ||||| ||| || |||||||||||||    
T  12726390 gagacaaaaacagagtagtggaggtagtggttgtacactttgtacaattgtactttgttaactctctttaaagagtaagcatccaatgc 12726302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 11868268 - 11868335
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||| | |||||||||||||||||    
T  11868268 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaatcgtactttgtcaacgctctt 11868335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 20725093 - 20725196
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaat 107  Q
    |||| ||||||||||||||||  |||||||| |||||||||||  |||| ||||||||||| || || ||||||||||||| ||| || | | |||||||    
T  20725093 aaacagagtagtggagatagttattgtacacttcgtacaattgtcctttttcaacgctcttcaagaaacaagcatccaatgtcttcaaatccttttgaat 20725192  T
Q  108 tagt 111  Q
    ||||    
T  20725193 tagt 20725196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 25398415 - 25398348
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| ||||||||||| |||||||||||||| |||||||||||  ||||||||||||||||    
T  25398415 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtgctttgtcaacgctctt 25398348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 49553637 - 49553558
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||   || | ||| |||||||||||||    
T  49553637 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctctgaagaacaaacatccaatgcctt 49553558  T

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Target: chr3; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 53056887 - 53056796
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||  | ||||||| |||||||||  || | |||||||||||||||||    
T  53056887 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgcctt 53056796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2561187 - 2561273
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaat 87  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||| ||| |||||||||||| ||||  || | ||||||||||||    
T  2561187 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacacttgtactttgtcaacgatctttgaagaacaagcatccaat 2561273  T

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Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 18121770 - 18121688
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaa 95  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||| |||||||||  || |  |||||| ||||||||||||    
T  18121770 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtaaacgctctttgaagaaaaagcattcaatgcctttaa 18121688  T

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Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 18142900 - 18142818
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaa 95  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||| |||||||||  || |  |||||| ||||||||||||    
T  18142900 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtaaacgctctttgaagaaaaagcattcaatgcctttaa 18142818  T

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Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 20627578 - 20627500
Alignment:
Q  14 agtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||| |||||||||||||| ||||||||  | |||||||||||||||||  | || |||||||||||||||||    
T  20627578 agtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgataaacaagcatccaatgcctt 20627500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 14955433 - 14955517
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||| ||||||||||| |||||||||||||| ||||||||  | |||||||||||||||||  || |  ||||||||||||||||    
T  14955433 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaataagcatccaatgcctt 14955517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 12968312 - 12968415
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaat 107  Q
    |||| |||||||||||||||||||||||||| ||||| |||||  ||||  ||||| |||| ||| |  ||| |||||||||||| || ||| |||||||    
T  12968312 aaacagagtagtggagatagtggttgtacacttcgtataattgtccttttccaacgttcttcaaagaataagtatccaatgccttcaaattcttttgaat 12968411  T
Q  108 tagt 111  Q
    ||||    
T  12968412 tagt 12968415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 13824092 - 13824159
Alignment:
Q  25 tagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||| ||||||||||| |||||||||||||||||  || | ||| |||||||||||||    
T  13824092 tagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgcctt 13824159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 47405581 - 47405514
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| ||||  |||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||    
T  47405581 gagacaaaaacatagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacactctt 47405514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 19889103 - 19889017
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||||||| | | ||||||  || || ||| | ||||||||||||||    
T  19889103 gagacacaaactgag--gtggagatagtggttgtacacttcgtacaattgtaatatgtcaatcctattcaaagaacaagcatccaatgc 19889017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21605814 - 21605726
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||  | | | |||||||||||||  || |  |||||||||||||    
T  21605814 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaatgc 21605726  T

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Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 21640878 - 21640954
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||| ||||| ||  | ||| |||||||||||||  ||||  |||||||||||||    
T  21640878 gagtagtggagatagtggttgtacacttcgtaaaaacgtactatgtcaacgctctttgaaaaataagcatccaatgc 21640954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 29855415 - 29855499
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||| ||||||||||| |||||||||||||| ||||||||  | ||| |||||||||| ||  || | |||||||||||||||||    
T  29855415 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactctgtcaacgctttttgaagaacaagcatccaatgcctt 29855499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 23538312 - 23538221
Alignment:
Q  15 gtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaa 106  Q
    |||||||||||||||||||||||| |||||||||||  |||| |||||| |||  ||| |  |||||| ||||||||| || ||| ||||||    
T  23538312 gtagtggagatagtggttgtacacttcgtacaattgtcctttttcaacgttctctaaagaataagcattcaatgccttcaaattcttttgaa 23538221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 46796527 - 46796460
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| ||||  ||||||||||||||||||||||||| ||||||||  | ||| |||||||||||||    
T  46796527 gagacaaaaacaaagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 46796460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 52920405 - 52920496
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| | ||||| ||| ||||||||||| || ||||||||||  | ||||||||||||||| ||| | |||||||| ||||||||    
T  52920405 gagacaaaaacagggtagtagaggtagtggttgtatacttcgtacaattttaatttgtcaacgctctttaaagaacaagcatcaaatgcctt 52920496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 14969341 - 14969415
Alignment:
Q  16 tagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcc 90  Q
    ||||||||||||||||||||||| ||||| || || |||||||||||||| ||  || |  ||||||||||||||    
T  14969341 tagtggagatagtggttgtacacttcgtaaaaatgtactttgtcaacgctatttgaagaataagcatccaatgcc 14969415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21636830 - 21636742
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||| |||| ||||||||||  |||||||||||||| ||||||||  | ||| |||||||||||||  || |  |||||||||||||    
T  21636830 gagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 21636742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 2785075 - 2785130
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    ||||||||||| |||||||||||||| ||||||||  | ||| |||||||||||||    
T  2785075 gagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 2785130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 110
Target Start/End: Complemental strand, 19249558 - 19249463
Alignment:
Q  15 gtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaattag 110  Q
    |||||||||  ||||||||||||| |||||||||||  || | ||| ||||||| ||| | ||| ||||||||||||| || | | ||||||||||    
T  19249558 gtagtggagtaagtggttgtacacttcgtacaattgtcctatttcagcgctcttcaaagaacaaacatccaatgccttcaaatccttttgaattag 19249463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22140763 - 22140850
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatg 88  Q
    |||||| |||| ||||||||||| |||||||| ||||| |||||||   | ||| |||||||||||||  || | |||||||||||||    
T  22140763 gagacaaaaacagagtagtggaggtagtggttatacacttcgtacatacgtactatgtcaacgctctttgaagaacaagcatccaatg 22140850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24775694 - 24775627
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| ||||||||||  |||||||||||||| ||||||||  | |||||||||| ||||||    
T  24775694 gagacaaaaacagagtagtggatgtagtggttgtacacttcgtacaaacgtactttgtcaaagctctt 24775627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 30054377 - 30054310
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| ||||||||||| |||||||||||||  ||||||||  | ||| |||||||||||||    
T  30054377 gagacaaaaacagagtagtggagttagtggttgtacatttcgtacaaacgtactatgtcaacgctctt 30054310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 33583240 - 33583295
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    ||||| ||||| |||||||||||||| ||||||||  | |||||||||||||||||    
T  33583240 gagtattggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt 33583295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1728175 - 1728129
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaa 47  Q
    |||||| |||| |||||||| ||||||||||||||||| ||||||||    
T  1728175 gagacaaaaacagagtagtgcagatagtggttgtacacttcgtacaa 1728129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 46349991 - 46349913
Alignment:
Q  14 agtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||  ||||||||||||| ||||||||| | |||||||||| | |||   || | |||||||||||||||||    
T  46349991 agtagtggaggcagtggttgtacacttcgtacaatcgtactttgtcaatgttctctgaagaacaagcatccaatgcctt 46349913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 49666553 - 49666519
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaa 47  Q
    |||||||||||||||||||||||||| ||||||||    
T  49666553 gagtagtggagatagtggttgtacacttcgtacaa 49666519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9700196 - 9700131
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctc 66  Q
    |||||| |||| |||||||| ||||||||||| ||||| ||||||||  | ||| |||||||||||    
T  9700196 gagacaaaaacagagtagtgcagatagtggttatacacttcgtacaaacgcactatgtcaacgctc 9700131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 37412605 - 37412650
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaa 47  Q
    ||||| |||| |||||||||||||||||||||||||  ||||||||    
T  37412605 agacagaaacagagtagtggagatagtggttgtacatttcgtacaa 37412650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 9958 - 10065
Alignment:
Q  3 gacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatt 102  Q
    ||||||||||||||||||||| |||||||||||||| | ||||||||| ||||||||||||||||| ||| | |||||||| |||||||| || ||||||    
T  9958 gacacaaactgagtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatcgaatgccttcaaattcatt 10057  T
Q  103 tgaattag 110  Q
    ||||||||    
T  10058 tgaattag 10065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 49332 - 49423
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  49332 gagacacaaactgagtagtggagatagttgttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 49423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32485 - 32573
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||| |||||    
T  32485 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatcaaatgc 32573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 455 - 389
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    ||||| |||| ||||||||||| ||||||| |||||| |||||||   | |||||||||||||||||    
T  455 agacataaacagagtagtggaggtagtggtcgtacacttcgtacagacgtactttgtcaacgctctt 389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15987233 - 15987324
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | |||||||||||||||||    
T  15987233 gagacacaaactgagtaatggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgcctt 15987324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 19086158 - 19086246
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | ||||||||||||||    
T  19086158 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 19086246  T

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Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 20112849 - 20112761
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||| ||| | ||||||||||||||    
T  20112849 gagacacaaactgagtagtggagatagtggttgtacatttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 20112761  T

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Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 24116828 - 24116916
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | ||||||||||||||    
T  24116828 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgc 24116916  T

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Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 18378314 - 18378405
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| ||| | || ||||||||||||||    
T  18378314 gagacacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttatcaacgctcttcaaagaacatgcatccaatgcctt 18378405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 15302200 - 15302294
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaa 95  Q
    ||||||| |||||||||||||||||||||||||||||| | ||||||||| ||  ||||||||||||| ||| | ||||||||||||||||||||    
T  15302200 gagacactaactgagtagtggagatagtggttgtacactttgtacaattgtacaatgtcaacgctcttcaaagaacaagcatccaatgcctttaa 15302294  T

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Target: chr6; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 12715569 - 12715502
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||    
T  12715569 gagacacaaactgagtagtggagatagtggttctacacttcgtacaattgtactttgtcaacgctctt 12715502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 23284564 - 23284655
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||| ||  | ||||||| |||||||||    
T  23284564 gagacacaaactgagtagtggagataatggttatacacttcgtacaattgtactttgtcaacgctcttcaaggaacaagcattcaatgcctt 23284655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25594068 - 25594155
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatg 88  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||||||| ||||||||||||| ||| ||| | |||||||||||||    
T  25594068 gagacacaaactgagtagtggaggtagtggttgtacatttcgtacaattgtactttgtcaacgcgcttcaaagaacaagcatccaatg 25594155  T

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Target: chr6; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 9717843 - 9717937
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaa 95  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||  || | |||||||| |||||||||||    
T  9717843 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatcaaatgcctttaa 9717937  T

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Target: chr6; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13602172 - 13602263
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||| ||||| || |||||||| | |||||||||| |||| ||| |  ||||||||||||||||    
T  13602172 gagacacaaactgagtagtggagatagtggttatacacttcttacaattgtattttgtcaacgttcttcaaagaataagcatccaatgcctt 13602263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 22802153 - 22802235
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaa 95  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||| |||||||||  || | ||||||||||||||||||||    
T  22802153 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgttaacgctctttgaagaacaagcatccaatgcctttaa 22802235  T

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Target: chr6; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 32544265 - 32544359
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaa 95  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||  || |  || ||||||||||||||||    
T  32544265 gagacagaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataaacatccaatgcctttaa 32544359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 14100582 - 14100498
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||| ||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||| ||| |  ||||||||||||||||    
T  14100582 aaacagagtagtggaggtagtggttgtacacttcgtataattgtactttgtcaacgctctttaaagaagaagcatccaatgcctt 14100498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16265299 - 16265211
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    ||||||||||| ||||||||||| ||||||||| |||| ||||||||||| ||||| |||||||||||  || | ||||||||||||||    
T  16265299 gagacacaaacagagtagtggaggtagtggttgcacacttcgtacaattgtactttctcaacgctctttgaagaacaagcatccaatgc 16265211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 15531761 - 15531682
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||| |||||||||||| | ||||||||||| |||||||||||||||||  || | |||||||||||||||||    
T  15531761 gagtagtggaggtagtggttgtacgcttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 15531682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 21625114 - 21625192
Alignment:
Q  14 agtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  || | ||||||| |||||||||    
T  21625114 agtagtggagatagtggttgtacacttcgtacaattgtactttgttaacgctctttgaagaacaagcatgcaatgcctt 21625192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 26943577 - 26943667
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||| |||| ||||||||||  |||||||||||||| ||||||||||| |||| | |||||||||| ||| | |||||||||||||||||    
T  26943577 agacaaaaacagagtagtggaagtagtggttgtacacttcgtacaattgtacttcgccaacgctcttcaaagaacaagcatccaatgcctt 26943667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 29918018 - 29918084
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    ||||| |||| ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||    
T  29918018 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt 29918084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 19623980 - 19624028
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaattg 50  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19623980 agacacaaactgagtagtggagatagtggttgtacacttcgtacaattg 19624028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15954703 - 15954794
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||  | |||||||||||||||||  || | ||||||| |||||||||    
T  15954703 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaataacaagcattcaatgcctt 15954794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 20730853 - 20730762
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||| ||||||| |||||||||||||| | ||||||||| |||||||||||||||||  || | ||| |||||||||||||    
T  20730853 gagacaaaaacagagcagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgcctt 20730762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 21235137 - 21235216
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||| |||||||||||||| || |||||||| |||||||||||||||||  || | |||||||| ||||||||    
T  21235137 gagtagtggaggtagtggttgtacacttcatacaattgtactttgtcaacgctctttgaagaacaagcatcgaatgcctt 21235216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22076556 - 22076489
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| |||||||||||||||||||||||||| |||||||| || ||| |||||||||||||    
T  22076556 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaatgtactatgtcaacgctctt 22076489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 26972375 - 26972283
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaa 95  Q
    |||||| | |||||||||||||| |||||||||||||| |||  |||||| |||||||||||||||||  || | ||| ||||||||||||||||    
T  26972375 gagacaaatactgagtagtggaggtagtggttgtacacttcg--caattgtactttgtcaacgctctttgaagaacaaacatccaatgcctttaa 26972283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 13435544 - 13435596
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgct 65  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||    
T  13435544 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgct 13435596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 20488060 - 20487976
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||| ||||||||||| ||||||||||| || ||||||||  | |||||||||||||||||  || | |||||||||||||||||    
T  20488060 aaacagagtagtggaggtagtggttgtaaacttcgtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 20487976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12423261 - 12423328
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||  | ||| |||||||||||||    
T  12423261 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaaggtactatgtcaacgctctt 12423328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16336127 - 16336194
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| |||||||| ||||||||||||||||| ||||||||| | ||| |||||||||||||    
T  16336127 gagacaaaaacagagtagtgtagatagtggttgtacacttcgtacaatcgtactatgtcaacgctctt 16336194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 18435556 - 18435647
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| | ||| ||||| |||||||||||||| | ||||| ||| |||||||||||||||||  || | |||||||||||||||||    
T  18435556 gagacaaaaacagtgtactggaggtagtggttgtacactttgtacacttgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 18435647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 10640555 - 10640457
Alignment:
Q  14 agtagtggagatagtggttgtacacatcgtacaattggac-tttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaattagt 111  Q
    |||||||||| |||||||||||||| |||||||||||  | ||| ||||||||||| ||| | |||||||| |||||||| || | | |||||||||||    
T  10640555 agtagtggaggtagtggttgtacacttcgtacaattgtccttttttcaacgctcttcaaagaacaagcatctaatgccttcaaatccttttgaattagt 10640457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 12348995 - 12349085
Alignment:
Q  3 gacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    |||| |||| |||||||||||||||||||||||||| | ||||||  | ||| |||||||||||||  || |  |||||||||||||||||    
T  12348995 gacaaaaacagagtagtggagatagtggttgtacactttgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttt 12349085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 19470683 - 19470780
Alignment:
Q  14 agtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaattagt 111  Q
    |||||||||| ||||||||||| || |||||||||||  |||| || |||||||  ||| | ||||||||||||||||| || | | |||||||||||    
T  19470683 agtagtggaggtagtggttgtaaacttcgtacaattgtcctttttccacgctctgcaaagaacaagcatccaatgccttcaaatccttttgaattagt 19470780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 16877220 - 16877280
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||| ||||||||||| |||||||||||||| ||||||||  | |||||||||||||||||    
T  16877220 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt 16877280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 21618251 - 21618335
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||| ||||||||||| |||||||||||||| ||||||||  | ||| |||||||||||||  || |  ||||||||||||||||    
T  21618251 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctt 21618335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 19688790 - 19688857
Alignment:
Q  25 tagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||| ||||| ||||||||||| |||||||||||||||||  || | ||| |||||||||||||    
T  19688790 tagtggttatacacttcgtacaattgtactttgtcaacgctctttgaagaacaaacatccaatgcctt 19688857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33352075 - 33352008
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| ||||||||||||||||| |||||||| ||||||||  | ||| |||||||||||||    
T  33352075 gagacaaaaacagagtagtggagatagtgattgtacacttcgtacaaacgtactatgtcaacgctctt 33352008  T

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Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19482752 - 19482817
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctc 66  Q
    |||||| |||| |||||||| ||||||||||||||||| ||||||||  | ||| |||||||||||    
T  19482752 gagacaaaaacagagtagtgcagatagtggttgtacacttcgtacaaacgcactatgtcaacgctc 19482817  T

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Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 17381521 - 17381588
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| || |||||||| ||||| |||||||| ||||||||  | |||||||||||||||||    
T  17381521 gagacaaaaacagaatagtggaggtagtgattgtacacttcgtacaaacgtactttgtcaacgctctt 17381588  T

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Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 17316674 - 17316609
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctc 66  Q
    |||||| ||||  ||||||| ||||||||||||||||| ||||||||  | ||| |||||||||||    
T  17316674 gagacaaaaacatagtagtgcagatagtggttgtacacttcgtacaaacgcactatgtcaacgctc 17316609  T

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Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 19066167 - 19066079
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||| |||| ||||||||||  |||||||||||||| ||||||||    ||| |||||||||||||  || |  |||||||||||||    
T  19066167 gagacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaacatactatgtcaacgctctttgaagaataagcatccaatgc 19066079  T

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Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 19833175 - 19833115
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||| ||||||||||| ||||| |||||||| ||||||||  | ||| |||||||||||||    
T  19833175 aaacagagtagtggaggtagtgcttgtacacttcgtacaaacgtactatgtcaacgctctt 19833115  T

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Target: scaffold0290 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 18732 - 18641
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| ||| | |||| ||||||||||||    
T  18732 gagacacaaactgagtagtggagatagtggttgtacacttcgtaaaattgtactttgtcaacgctcttcaaagaacaagtatccaatgcctt 18641  T

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Target: scaffold0161 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 10219 - 10128
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||| ||||||||||| ||||||| |||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||    
T  10219 gagacacaaacagagtagtggaggtagtggtcgtacacttcgtacaattgtactttgtcaacgctctttaaaaaacaagcatccaatgcctt 10128  T

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Target: scaffold0161; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14883 - 14816
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    ||||||||||| ||||||||||| ||||||| |||||| ||||||||||| |||||||||||||||||    
T  14883 gagacacaaacagagtagtggaggtagtggtcgtacacttcgtacaattgtactttgtcaacgctctt 14816  T

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Target: scaffold0004 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 377670 - 377579
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||| |||||| ||| | |||||||||||||||||    
T  377670 gagacacaaactgagtagtggagatagtggttgtacacttggtacaattgtactttgtcaatgctcttcaaagaacaagcatccaatgcctt 377579  T

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Target: scaffold0004; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 220242 - 220346
Alignment:
Q  5 cacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttg 104  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||| ||| | ||||||||||||| ||| || ||||||||    
T  220242 cacaaactgagtagtggaggtagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaataacaagcatccaatg-cttcaaattcatttg 220340  T
Q  105 aattag 110  Q
    ||||||    
T  220341 aattag 220346  T

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Target: scaffold0004; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 244390 - 244283
Alignment:
Q  6 acaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttga 105  Q
    |||||| ||||||||||| |||||||||||||| |||||||||||  |||| ||||||||||| ||| | ||||||||||||| ||| || | | |||||    
T  244390 acaaacagagtagtggaggtagtggttgtacacttcgtacaattgtcctttttcaacgctcttcaaagaacaagcatccaatgtcttcaaatccttttga 244291  T
Q  106 attagttg 113  Q
    ||||||||    
T  244290 attagttg 244283  T

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Target: scaffold0047 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 9903 - 10013
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    |||||||||||  |||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||| ||| | |||||||| |||||||| || ||||    
T  9903 gagacacaaacatagtagtggaggtagtggttttacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatctaatgccttcaaattca 10002  T
Q  101 tttgaattagt 111  Q
    |||||||||||    
T  10003 tttgaattagt 10013  T

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Target: scaffold0411 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12209 - 12297
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |  |||||||||||||    
T  12209 gagacacaatctgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaataagcatccaatgc 12297  T

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Target: scaffold0426 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13571 - 13662
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||| ||| ||||||||||||| ||| | ||| |||||||||||||    
T  13571 gagacacaaactgagtagtggagatagtggttgtacactttgtacaattgtactatgtcaacgctcttcaaagaacaaacatccaatgcctt 13662  T

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Target: scaffold0337 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 14648 - 14739
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||| |||   |||||||||||||||||    
T  14648 gagacacaaactgagtagtggaggtagtggttgtacacttcgtaaaattgtactttgtcaacgctcttcaaagtacaagcatccaatgcctt 14739  T

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Target: scaffold0065 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 1690 - 1781
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| |||   |||||||||||||||||    
T  1690 gagacacaaactaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagtacaagcatccaatgcctt 1781  T

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Target: scaffold0364 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 6007 - 6119
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    ||||||||||  ||||||| ||| |||||||||||||| | ||||||||| ||||||||||||||||| ||| | ||||||||||||||||| || | |     
T  6007 gagacacaaatagagtagtagaggtagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgccttcaaatcct 6106  T
Q  101 tttgaattagttg 113  Q
    |||||||||||||    
T  6107 tttgaattagttg 6119  T

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Target: scaffold0771 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 475 - 566
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||| ||||||| |||||||| ||||||||||| ||||||||||| ||| ||||||||||||| ||| | |||||||||||||||||    
T  475 gagacacaacctgagtaatggagataatggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatgcctt 566  T

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Target: scaffold0171 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 27540 - 27449
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||| | |||||||||||||||||  || |||||||||||||||||||    
T  27540 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaatggtactttgtcaacgctctttgaagagcaagcatccaatgcctt 27449  T

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Target: scaffold0083 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 26086 - 25995
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||||||||||| |||||||||||||||||| || |||||||| ||| ||||||| ||||| ||| | |||||||||||||||||    
T  26086 gagacacaaactgagtagtcgagatagtggttgtacacttcatacaattgtactatgtcaaccctcttcaaagaacaagcatccaatgcctt 25995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 7926 - 8013
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatg 88  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | |||||||||||||    
T  7926 gagacacaaacttcgtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatg 8013  T

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Target: scaffold0026; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 60016 - 60103
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatg 88  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| | |||||||||||||    
T  60016 gagacacaaactgagtagaagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaacaagcatccaatg 60103  T

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Target: scaffold0005 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 212355 - 212442
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    ||||| |||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| ||| | ||||||||||||||    
T  212355 agacaaaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaacaagcatccaatgc 212442  T

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Target: scaffold0035 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 19583 - 19489
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaa 95  Q
    |||||||||||||||||||| | ||||||||||||||| ||||||||||| | | ||||||||||||| ||| | |||||||||||||| |||||    
T  19583 gagacacaaactgagtagtgaatatagtggttgtacacttcgtacaattgtattatgtcaacgctcttcaaagaacaagcatccaatgcttttaa 19489  T

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Target: scaffold0035; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 99316 - 99270
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaa 47  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||    
T  99316 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaa 99270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15793 - 15885
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaa-ttggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||||| ||| ||| ||||||||||||| ||| | |||||||||||||||||    
T  15793 gagacacaaactgagtagtagagatggtggttgtacacttcgtacaatttgtactatgtcaacgctcttcaaagaacaagcatccaatgcctt 15885  T

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Target: scaffold0146 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15117 - 15205
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||| ||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||| || ||| | ||| ||||||||||    
T  15117 gagatacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctattcaaagaacaatcatccaatgc 15205  T

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Target: scaffold0251 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 7708 - 7770
Alignment:
Q  6 acaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||    
T  7708 acaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt 7770  T

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Target: scaffold1747 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 1324 - 1408
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||| |||||||||||||||||||||||||| ||||||||||| | ||| ||||||||||| |||||  ||||||| ||||||||    
T  1324 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgcctt 1408  T

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Target: scaffold1745 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 87 - 3
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||| |||||||||||||||||||||||||| ||||||||||| | ||| ||||||||||| |||||  ||||||| ||||||||    
T  87 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaataagcatctaatgcctt 3  T

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Target: scaffold0479 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 9969 - 10057
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||| |||| ||||||||||| |||||||||||||| | ||||||||| ||||||| ||||||||| ||| || |||||||||||||    
T  9969 gagacaaaaacagagtagtggaggtagtggttgtacactttgtacaattgtactttgtgaacgctcttcaaagagtaagcatccaatgc 10057  T

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Target: scaffold0210 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1660 - 1748
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||| ||||  |||||||||| |||||||||||||| || |||||||| ||||||||||||||||| ||| || |||||||||||||    
T  1660 gagacaaaaacaaagtagtggaggtagtggttgtacacttcctacaattgtactttgtcaacgctcttcaaagagtaagcatccaatgc 1748  T

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Target: scaffold0120 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 36886 - 36795
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||| ||| |||||||||||||| |||||||||||  |||||||||| ||||| ||| | |||||||||||||||||    
T  36886 gagacaaaaacagagtagtagaggtagtggttgtacacttcgtacaattgttctttgtcaacactctttaaagaacaagcatccaatgcctt 36795  T

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Target: scaffold0120; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 42119 - 42210
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||| ||| |||||||||||||| |||||||||||  |||||||||| ||||| ||| | |||||||||||||||||    
T  42119 gagacaaaaacagagtagtagaggtagtggttgtacacttcgtacaattgttctttgtcaacactctttaaagaacaagcatccaatgcctt 42210  T

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Target: scaffold0116 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 21082 - 20991
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||||| |||| ||| ||||||||  || |  ||||||||||||||||    
T  21082 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaattgtacttggtcgacgctctttgaagaataagcatccaatgcctt 20991  T

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Target: scaffold0217 (Bit Score: 47; Significance: 5e-18; HSPs: 3)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 19031 - 19125
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaa 95  Q
    |||||| |||||||||||||||| |||||||||||||| ||||||| ||| |||||  ||||||||||  || | |||||||| |||||||||||    
T  19031 gagacaaaaactgagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctttgaagaacaagcatcaaatgcctttaa 19125  T

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Target: scaffold0217; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 9560 - 9624
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgct 65  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||| | | ||| ||||||||||    
T  9560 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacagtcgtactatgtcaacgct 9624  T

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Target: scaffold0217; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 22242 - 22151
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||| |||||||||||||||||||| ||||||||  | | | ||||||||||| |  || |  ||||||||||||||||    
T  22242 gagacaaaaacagagtactggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctcattgaagaataagcatccaatgcctt 22151  T

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Target: scaffold0023 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 103585 - 103663
Alignment:
Q  14 agtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||||||| ||||||||| |||| ||||||||||| |||||||||||||||||  || | |||||||||||||||||    
T  103585 agtagtggaggtagtggttgcacacttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 103663  T

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Target: scaffold0022 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 159055 - 159164
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    |||||||||||  |||||| ||| |||||||| ||||| || ||||||||  |||||||||||||||| ||| | |||||||  |||||||| || ||||    
T  159055 gagacacaaacaaagtagtagaggtagtggttttacacttcatacaattgtcctttgtcaacgctcttcaaagaacaagcatataatgccttcaaattca 159154  T
Q  101 tttgaattag 110  Q
    ||||||||||    
T  159155 tttgaattag 159164  T

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Target: scaffold0022; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 37414 - 37463
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaac 62  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||| ||||    
T  37414 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgccaac 37463  T

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Target: scaffold0022; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 135474 - 135523
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaac 62  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||| ||||    
T  135474 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgccaac 135523  T

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Target: scaffold0012 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 215601 - 215517
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||| ||||||||||| |||||||||||||| ||||||||  | |||||||||||||||||  || | |||||||||||||||||    
T  215601 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 215517  T

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Target: scaffold1359 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 766 - 675
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||||| | ||||||  | |||||||||||||||||  || | |||||||||||||||||    
T  766 gagacaaaaacagagtagtggaggtagtggttgtacacttagtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 675  T

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Target: scaffold1359; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 1865 - 1778
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||  | | | |||||||||||||  || |  |||||||||||||    
T  1865 agacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtaatatgtcaacgctctttgaagaataagcatccaatgc 1778  T

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Target: scaffold0530 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 2090 - 2039
Alignment:
Q  17 agtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  2090 agtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctt 2039  T

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Target: scaffold0015 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 60803 - 60894
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||  | ||| |||||||||||||  || | ||||||| |||||||||    
T  60803 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaacaagcattcaatgcctt 60894  T

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Target: scaffold0003 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 90166 - 90075
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| ||| |||||||||| ||||||| ||| | |||||||||||||||  || | |||||||||||||||||    
T  90166 gagacaaaaacagagtagtggaggtaggggttgtacacttcgtacacttgtattttgtcaacgctctttgaagaacaagcatccaatgcctt 90075  T

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Target: scaffold0273 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 5634 - 5736
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaat 107  Q
    |||||||||||||||| |||||||||||||| ||||||||||| | |||  ||||| |||  ||| |  |||||||||||||||| || ||||||||||     
T  5634 aaactgagtagtggaggtagtggttgtacacttcgtacaattgta-ttttccaacgttctccaaagaataagcatccaatgccttcaaattcatttgaaa 5732  T
Q  108 tagt 111  Q
    ||||    
T  5733 tagt 5736  T

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Target: scaffold0227 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 22676 - 22767
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| |||| ||||||||||| |||||||||||| | || |||||||| ||||||||||| |||||  || |  ||||||||||||||||    
T  22676 gagacaaaaacagagtagtggaggtagtggttgtacgcttcatacaattgtactttgtcaacactctttgaagaataagcatccaatgcctt 22767  T

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Target: scaffold0043 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 78477 - 78386
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||||| ||||  ||||||| || |||||||||||||| ||||||||  | ||||||||||||||||| ||| |  ||||||||||||||||    
T  78477 gagacaaaaacatagtagtgtaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttaaagaataagcatccaatgcctt 78386  T

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Target: scaffold0176 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 9168 - 9246
Alignment:
Q  14 agtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||||||||||||||||||||||| ||||||||  | ||| |||||||||||||  || |  ||||||||||||||||    
T  9168 agtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctt 9246  T

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Target: scaffold0861 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 5040 - 4967
Alignment:
Q  19 tggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||| |||||||||||||| || |||||||| ||||||||||||||||  ||| | ||| |||||||||||||    
T  5040 tggaggtagtggttgtacacttcatacaattgtactttgtcaacgctctataaagaacaaacatccaatgcctt 4967  T

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Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 74581 - 74690
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttca 100  Q
    |||| ||||||  |||||| ||| |||||||||||||| || |||||||| |||||||||| ||| || ||| |||||||||| ||| |||| || | |     
T  74581 gagatacaaacaaagtagtagaggtagtggttgtacacttcatacaattgtactttgtcaatgcttttcaaagagcaagcatctaattccttcaaatcct 74680  T
Q  101 tttgaattag 110  Q
    ||||||||||    
T  74681 tttgaattag 74690  T

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Target: scaffold0249 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17876 - 17784
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgccttt 93  Q
    |||||| |||| |||||||||||||||||||||||||| || |||||  | ||| |||||||||||||  ||    |||||||||||||||||    
T  17876 gagacaaaaacagagtagtggagatagtggttgtacacttcatacaaacgtactatgtcaacgctctttgaaggataagcatccaatgccttt 17784  T

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Target: scaffold0064 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 44023 - 43939
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    |||| |||||||||||||||||||||||||  |||||||| ||  |||| ||||||||||| ||  | || ||||||||||||||    
T  44023 aaacagagtagtggagatagtggttgtacaattcgtacaaatgtcctttttcaacgctcttcaaggaacaggcatccaatgcctt 43939  T

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Target: scaffold0439 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 6839 - 6760
Alignment:
Q  13 gagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||| ||||| |||||||||||||| ||||||||  | |||||||||| ||||||  || | |||||||||||||||||    
T  6839 gagtactggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctctttgaagaacaagcatccaatgcctt 6760  T

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Target: scaffold0280 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 2841 - 2774
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||  | ||| ||||||| |||||    
T  2841 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacactctt 2774  T

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Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 25510 - 25443
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||  | ||| ||||||| |||||    
T  25510 gagacaaaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacactctt 25443  T

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Target: scaffold0247; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15850 - 15813
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacac 38  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  15850 gagacaaaaacagagtagtggagatagtggttgtacac 15813  T

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Target: scaffold0211 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 15732 - 15642
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctt 92  Q
    ||||| |||| ||||||||||||||||||| |||||| |||||||   | |||||||||| ||||||  |||   ||||||||||||||||    
T  15732 agacataaacagagtagtggagatagtggtcgtacacttcgtacagacgtactttgtcaatgctctttgaaagataagcatccaatgcctt 15642  T

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Target: scaffold0056 (Bit Score: 35; Significance: 0.00000000008; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 36281 - 36183
Alignment:
Q  15 gtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcatttgaattagttg 113  Q
    |||||||||||||||||||||||| |||||||||||  | || ||||| ||||  ||  |  |||||||||||||||||||   |||||||| ||||||    
T  36281 gtagtggagatagtggttgtacacttcgtacaattgtccattttcaactctctccaacgaaaaagcatccaatgcctttaaaaccatttgaaatagttg 36183  T

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Target: scaffold0056; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 25776 - 25712
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgct 65  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||||  | ||| ||||||||||    
T  25776 gagacaaaaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgct 25712  T

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Target: scaffold0056; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34915 - 34827
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgc 89  Q
    |||||| |||| ||||||||||| |||||||||||||| || |||||  | ||| |||||||||||||  || |  |||||||||||||    
T  34915 gagacaaaaacagagtagtggaggtagtggttgtacacttcatacaaacgtactatgtcaacgctctttgaagaataagcatccaatgc 34827  T

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Target: scaffold0387 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 7383 - 7448
Alignment:
Q  3 gacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||| |||| ||||||||||  |||||||||||||| |||||||| || ||| |||||||||||||    
T  7383 gacaaaaacagagtagtggaagtagtggttgtacacttcgtacaaatgtactatgtcaacgctctt 7448  T

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Target: scaffold0081 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 40638 - 40746
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctcttaaaaaagcaagcatccaatgcctttaacttcat 101  Q
    ||||| |||| |||||||| || |||||||||||||| || ||||||||  |||| ||||||||||| ||| | | | ||||  ||||||| || ||| |    
T  40638 agacataaacagagtagtgaaggtagtggttgtacacttcttacaattgttctttttcaacgctcttcaaagaaccaccatcatatgccttcaaattctt 40737  T
Q  102 ttgaattag 110  Q
    |||||||||    
T  40738 ttgaattag 40746  T

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Target: scaffold0040 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 1619 - 1583
Alignment:
Q  14 agtagtggagatagtggttgtacacatcgtacaattg 50  Q
    ||||||||||||||||||||||||| |||||||||||    
T  1619 agtagtggagatagtggttgtacacttcgtacaattg 1583  T

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Target: scaffold0414 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 7260 - 7221
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaa 47  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  7260 aaacagagtagtggagatagtggttgtacacttcgtacaa 7221  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 5713 - 5646
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||||| ||||  |||||||||| |||||||||||||| || || || || |||||||||||||||||    
T  5713 gagacaaaaacatagtagtggaggtagtggttgtacacttcatataaatgtactttgtcaacgctctt 5646  T

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Target: scaffold0334 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 7824 - 7858
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgta 35  Q
    |||||||||||||||||| ||||||||||||||||    
T  7824 gagacacaaactgagtagaggagatagtggttgta 7858  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 165056 - 164990
Alignment:
Q  2 agacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    ||||| |||| ||||||||||| ||||||| |||||| |||||||   | |||||||||||||||||    
T  165056 agacataaacagagtagtggaggtagtggtcgtacacttcgtacagacgtactttgtcaacgctctt 164990  T

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Target: scaffold0607 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6006 - 6043
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacac 38  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  6006 gagacaaaaacagagtagtggagatagtggttgtacac 6043  T

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Target: scaffold0908 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 3999 - 3939
Alignment:
Q  8 aaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgctctt 68  Q
    |||| ||| ||||||| ||||||| |||||| |||||||  || |||||||||||||||||    
T  3999 aaacagagaagtggaggtagtggtcgtacacttcgtacagatgtactttgtcaacgctctt 3939  T

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Target: scaffold0473 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2802 - 2738
Alignment:
Q  1 gagacacaaactgagtagtggagatagtggttgtacacatcgtacaattggactttgtcaacgct 65  Q
    |||||| |||| ||||||||||| |||||||||||||| || |||||  | ||| ||||||||||    
T  2802 gagacaaaaacagagtagtggagttagtggttgtacacttcatacaaacgtactatgtcaacgct 2738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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