View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0172_low_10 (Length: 330)

Name: NF0172_low_10
Description: NF0172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0172_low_10
NF0172_low_10
[»] chr4 (69 HSPs)
chr4 (3-321)||(40846098-40846415)
chr4 (5-287)||(45833395-45833676)
chr4 (1-321)||(12810973-12811289)
chr4 (5-296)||(6641685-6641972)
chr4 (74-287)||(15139296-15139510)
chr4 (11-266)||(37435387-37435639)
chr4 (5-287)||(14604737-14605017)
chr4 (1-241)||(23750519-23750756)
chr4 (2-287)||(12601099-12601381)
chr4 (1-287)||(16632437-16632720)
chr4 (1-250)||(29680410-29680658)
chr4 (13-220)||(19884711-19884916)
chr4 (1-223)||(55380287-55380508)
chr4 (9-223)||(56034579-56034792)
chr4 (1-215)||(19620962-19621175)
chr4 (5-236)||(22675402-22675630)
chr4 (5-287)||(17247245-17247524)
chr4 (1-200)||(19666369-19666567)
chr4 (1-187)||(37985541-37985726)
chr4 (1-223)||(3395587-3395808)
chr4 (1-187)||(9140909-9141094)
chr4 (1-236)||(14904236-14904470)
chr4 (2-236)||(19911760-19911994)
chr4 (11-217)||(10072942-10073146)
chr4 (129-241)||(23123555-23123667)
chr4 (25-220)||(13576012-13576204)
chr4 (10-220)||(413008-413215)
chr4 (25-236)||(3483742-3483952)
chr4 (74-287)||(14833465-14833673)
chr4 (75-224)||(41114663-41114811)
chr4 (25-202)||(11915721-11915896)
chr4 (245-321)||(55380499-55380575)
chr4 (5-64)||(17540396-17540455)
chr4 (5-185)||(29121371-29121550)
chr4 (162-287)||(22089745-22089869)
chr4 (5-65)||(6517486-6517546)
chr4 (5-220)||(54679931-54680141)
chr4 (245-287)||(8105893-8105935)
chr4 (5-287)||(10692852-10693117)
chr4 (5-287)||(10906618-10906883)
chr4 (5-65)||(3105469-3105529)
chr4 (5-65)||(8105638-8105698)
chr4 (5-65)||(16853504-16853564)
chr4 (5-65)||(17398724-17398784)
chr4 (273-321)||(37435300-37435348)
chr4 (5-65)||(56533112-56533172)
chr4 (10-49)||(8685509-8685548)
chr4 (245-287)||(3499493-3499535)
chr4 (245-287)||(14571248-14571290)
chr4 (14-63)||(16940026-16940075)
chr4 (75-119)||(11901257-11901301)
chr4 (5-65)||(22190847-22190907)
chr4 (25-65)||(38513899-38513939)
chr4 (10-65)||(1672395-1672450)
chr4 (10-65)||(1674870-1674925)
chr4 (274-321)||(14833678-14833725)
chr4 (278-321)||(16632728-16632771)
chr4 (245-288)||(17398528-17398571)
chr4 (10-53)||(17788109-17788152)
chr4 (25-63)||(3499704-3499742)
chr4 (5-63)||(20977458-20977516)
chr4 (245-287)||(22191062-22191104)
chr4 (245-287)||(55732017-55732059)
chr4 (245-286)||(6517709-6517750)
chr4 (245-285)||(3105284-3105324)
chr4 (273-321)||(19620871-19620919)
chr4 (5-65)||(25651154-25651214)
chr4 (273-321)||(29680337-29680385)
chr4 (243-287)||(40860895-40860939)
[»] scaffold0004 (5 HSPs)
scaffold0004 (2-287)||(220242-220525)
scaffold0004 (1-296)||(377373-377667)
scaffold0004 (3-224)||(244172-244390)
scaffold0004 (5-65)||(211405-211465)
scaffold0004 (228-296)||(244067-244135)
[»] chr2 (84 HSPs)
chr2 (1-321)||(22187886-22188205)
chr2 (1-321)||(10009535-10009853)
chr2 (1-236)||(39037511-39037745)
chr2 (1-287)||(23235004-23235289)
chr2 (1-286)||(22454809-22455093)
chr2 (1-287)||(30666986-30667271)
chr2 (1-321)||(18376704-18377009)
chr2 (1-286)||(21537067-21537351)
chr2 (1-287)||(20568568-20568853)
chr2 (1-223)||(25829131-25829352)
chr2 (1-236)||(25189395-25189629)
chr2 (1-321)||(23595371-23595670)
chr2 (1-224)||(13963859-13964081)
chr2 (1-223)||(19540413-19540634)
chr2 (1-287)||(24850483-24850769)
chr2 (3-287)||(9015189-9015469)
chr2 (1-321)||(24377098-24377403)
chr2 (1-266)||(25037098-25037362)
chr2 (1-266)||(25041205-25041469)
chr2 (10-321)||(38781405-38781713)
chr2 (5-287)||(22317594-22317877)
chr2 (1-220)||(30621213-30621431)
chr2 (1-220)||(30623834-30624052)
chr2 (1-287)||(40782474-40782751)
chr2 (1-220)||(41121605-41121822)
chr2 (11-282)||(22272139-22272407)
chr2 (1-266)||(24576032-24576295)
chr2 (129-284)||(22260530-22260683)
chr2 (1-215)||(28140509-28140722)
chr2 (1-321)||(23184114-23184407)
chr2 (25-220)||(20151921-20152114)
chr2 (111-261)||(7609067-7609216)
chr2 (5-220)||(6574009-6574223)
chr2 (1-187)||(24779340-24779525)
chr2 (10-220)||(44881173-44881381)
chr2 (5-185)||(28711618-28711797)
chr2 (5-65)||(31800926-31800986)
chr2 (5-209)||(26618998-26619200)
chr2 (257-316)||(25189621-25189680)
chr2 (5-65)||(1587072-1587132)
chr2 (5-150)||(6392634-6392779)
chr2 (75-211)||(18430835-18430970)
chr2 (10-223)||(19115089-19115300)
chr2 (5-65)||(28550957-28551017)
chr2 (5-65)||(44840435-44840495)
chr2 (228-287)||(28140454-28140513)
chr2 (10-65)||(30557360-30557415)
chr2 (5-65)||(22776327-22776387)
chr2 (5-65)||(22781705-22781765)
chr2 (5-65)||(22802461-22802521)
chr2 (5-65)||(31968082-31968142)
chr2 (5-65)||(35744039-35744099)
chr2 (14-65)||(14581525-14581576)
chr2 (5-60)||(33074227-33074282)
chr2 (11-65)||(3277037-3277091)
chr2 (11-61)||(28701272-28701322)
chr2 (245-287)||(33074465-33074507)
chr2 (275-321)||(40782757-40782803)
chr2 (258-304)||(41121538-41121584)
chr2 (249-321)||(13963777-13963848)
chr2 (273-321)||(39037424-39037472)
chr2 (5-65)||(40332088-40332148)
chr2 (25-65)||(45087223-45087263)
chr2 (10-65)||(22785694-22785749)
chr2 (10-65)||(34321975-34322030)
chr2 (274-321)||(38631240-38631287)
chr2 (245-287)||(1586876-1586918)
chr2 (245-287)||(22776149-22776191)
chr2 (245-287)||(22781527-22781569)
chr2 (245-287)||(22802697-22802739)
chr2 (245-287)||(28550762-28550804)
chr2 (245-287)||(30557123-30557165)
chr2 (279-321)||(30667280-30667322)
chr2 (245-287)||(35743821-35743863)
chr2 (245-287)||(40332302-40332344)
chr2 (245-287)||(44840645-44840687)
chr2 (245-294)||(3277245-3277294)
chr2 (250-287)||(6392864-6392901)
chr2 (1-34)||(22258198-22258231)
chr2 (25-65)||(23392707-23392747)
chr2 (5-65)||(31328005-31328065)
chr2 (5-65)||(31334726-31334786)
chr2 (247-287)||(31967887-31967927)
chr2 (243-287)||(34321740-34321784)
[»] chr7 (95 HSPs)
chr7 (1-321)||(16316399-16316716)
chr7 (1-223)||(41842212-41842432)
chr7 (1-321)||(39284419-39284723)
chr7 (1-236)||(21695400-21695634)
chr7 (1-321)||(15088519-15088824)
chr7 (4-287)||(10883047-10883329)
chr7 (1-286)||(11792906-11793191)
chr7 (10-287)||(15467924-15468200)
chr7 (1-237)||(13018431-13018664)
chr7 (1-287)||(13880103-13880388)
chr7 (5-287)||(28409042-28409322)
chr7 (1-287)||(12366624-12366907)
chr7 (5-287)||(22577897-22578176)
chr7 (5-266)||(21283270-21283528)
chr7 (1-287)||(11319404-11319689)
chr7 (1-223)||(13302809-13303030)
chr7 (5-236)||(44467067-44467298)
chr7 (1-287)||(13260499-13260774)
chr7 (1-223)||(2913546-2913767)
chr7 (1-220)||(21692286-21692504)
chr7 (106-287)||(13692445-13692624)
chr7 (1-236)||(19236969-19237202)
chr7 (1-184)||(13730652-13730834)
chr7 (5-223)||(13137833-13138050)
chr7 (1-223)||(13648728-13648949)
chr7 (5-220)||(33691653-33691867)
chr7 (5-223)||(24788144-24788361)
chr7 (5-220)||(23279900-23280113)
chr7 (1-250)||(29935272-29935517)
chr7 (1-221)||(2500037-2500256)
chr7 (1-236)||(30025904-30026138)
chr7 (5-287)||(9069565-9069847)
chr7 (19-188)||(13032045-13032213)
chr7 (1-198)||(5000784-5000981)
chr7 (11-215)||(30945304-30945505)
chr7 (5-215)||(30944271-30944478)
chr7 (25-287)||(13880611-13880875)
chr7 (5-211)||(13893949-13894153)
chr7 (170-287)||(14193241-14193358)
chr7 (25-220)||(9709745-9709937)
chr7 (25-220)||(28622299-28622491)
chr7 (131-215)||(4494634-4494718)
chr7 (1-236)||(331644-331877)
chr7 (25-286)||(12174216-12174476)
chr7 (191-301)||(13303026-13303136)
chr7 (1-93)||(16309975-16310066)
chr7 (11-220)||(48236845-48237051)
chr7 (5-65)||(16111979-16112039)
chr7 (11-220)||(33605694-33605901)
chr7 (5-287)||(35952562-35952843)
chr7 (162-215)||(9098205-9098258)
chr7 (252-321)||(24788359-24788428)
chr7 (5-185)||(14426550-14426729)
chr7 (5-65)||(1293033-1293093)
chr7 (106-185)||(13472555-13472635)
chr7 (5-287)||(4821477-4821756)
chr7 (231-293)||(13730560-13730622)
chr7 (247-296)||(9098109-9098158)
chr7 (5-123)||(14193117-14193234)
chr7 (25-123)||(9098284-9098381)
chr7 (273-321)||(13137747-13137795)
chr7 (5-65)||(14425450-14425510)
chr7 (5-65)||(19711108-19711168)
chr7 (245-321)||(21695629-21695705)
chr7 (257-321)||(41842130-41842194)
chr7 (273-321)||(44467337-44467385)
chr7 (273-321)||(48800464-48800512)
chr7 (274-321)||(2500313-2500360)
chr7 (10-65)||(19339345-19339400)
chr7 (25-59)||(13692374-13692408)
chr7 (245-287)||(30026133-30026175)
chr7 (5-62)||(27871721-27871778)
chr7 (5-65)||(2265614-2265674)
chr7 (273-321)||(4494760-4494808)
chr7 (5-65)||(8182933-8182993)
chr7 (247-287)||(8183172-8183212)
chr7 (273-321)||(11793194-11793242)
chr7 (273-321)||(30026178-30026226)
chr7 (5-65)||(48062915-48062975)
chr7 (10-53)||(4494585-4494628)
chr7 (257-304)||(21692509-21692556)
chr7 (245-288)||(27871936-27871979)
chr7 (257-296)||(29935241-29935280)
chr7 (245-288)||(48062703-48062746)
chr7 (245-287)||(1293190-1293232)
chr7 (245-287)||(5826190-5826232)
chr7 (245-287)||(7339774-7339816)
chr7 (245-287)||(14426756-14426798)
chr7 (246-316)||(16556577-16556647)
chr7 (246-316)||(16609015-16609085)
chr7 (245-287)||(30945263-30945305)
chr7 (129-217)||(15704445-15704531)
chr7 (5-62)||(24794813-24794870)
chr7 (245-286)||(44467293-44467334)
chr7 (273-321)||(5000678-5000726)
[»] scaffold0324 (1 HSPs)
scaffold0324 (1-316)||(9959-10271)
[»] chr5 (58 HSPs)
chr5 (1-284)||(23881066-23881347)
chr5 (1-287)||(21099558-21099842)
chr5 (10-287)||(642561-642836)
chr5 (1-287)||(17814967-17815250)
chr5 (1-321)||(23412809-23413112)
chr5 (1-236)||(9398649-9398872)
chr5 (1-172)||(12352763-12352933)
chr5 (1-287)||(19536155-19536439)
chr5 (1-237)||(6499238-6499471)
chr5 (1-223)||(89339-89560)
chr5 (5-266)||(7745569-7745827)
chr5 (1-223)||(21910555-21910776)
chr5 (1-250)||(21072131-21072378)
chr5 (1-220)||(21198925-21199141)
chr5 (1-223)||(6512348-6512566)
chr5 (5-315)||(20550898-20551190)
chr5 (1-236)||(41566338-41566572)
chr5 (1-236)||(26784353-26784587)
chr5 (11-182)||(33022673-33022843)
chr5 (5-211)||(25096753-25096960)
chr5 (5-211)||(25154723-25154930)
chr5 (200-321)||(12352637-12352758)
chr5 (10-205)||(13545455-13545641)
chr5 (5-215)||(31117880-31118088)
chr5 (5-220)||(11993891-11994103)
chr5 (245-321)||(25096629-25096704)
chr5 (245-321)||(25154599-25154674)
chr5 (5-220)||(42243683-42243896)
chr5 (5-217)||(14086462-14086673)
chr5 (5-65)||(9088972-9089032)
chr5 (1-65)||(29138480-29138544)
chr5 (5-65)||(30742983-30743043)
chr5 (5-65)||(3245515-3245575)
chr5 (5-65)||(4887025-4887085)
chr5 (245-321)||(6512266-6512342)
chr5 (5-65)||(28464413-28464473)
chr5 (5-65)||(30115911-30115971)
chr5 (5-64)||(28139610-28139669)
chr5 (250-287)||(14086406-14086443)
chr5 (247-287)||(4887250-4887290)
chr5 (5-65)||(10848776-10848836)
chr5 (5-65)||(11208060-11208119)
chr5 (257-321)||(21198840-21198904)
chr5 (243-287)||(23391483-23391527)
chr5 (5-65)||(25930230-25930290)
chr5 (5-65)||(33933270-33933330)
chr5 (245-284)||(28139813-28139852)
chr5 (245-288)||(30115744-30115787)
chr5 (245-287)||(28464218-28464260)
chr5 (245-287)||(29138262-29138304)
chr5 (273-321)||(7745465-7745513)
chr5 (257-301)||(9089182-9089226)
chr5 (273-321)||(9398562-9398610)
chr5 (243-287)||(10848988-10849032)
chr5 (5-65)||(15516972-15517032)
chr5 (129-220)||(15517095-15517184)
chr5 (5-65)||(32160769-32160829)
chr5 (5-65)||(35932080-35932140)
[»] chr6 (68 HSPs)
chr6 (1-287)||(23284567-23284852)
chr6 (10-287)||(13435544-13435820)
chr6 (1-294)||(13602175-13602467)
chr6 (10-287)||(15531485-15531761)
chr6 (1-202)||(15987236-15987437)
chr6 (1-287)||(24116831-24117116)
chr6 (5-287)||(9717850-9718131)
chr6 (11-287)||(21625114-21625385)
chr6 (78-301)||(25597558-25597781)
chr6 (1-233)||(20112614-20112846)
chr6 (1-223)||(12715344-12715566)
chr6 (1-223)||(19086161-19086372)
chr6 (11-287)||(19470683-19470955)
chr6 (1-250)||(19623982-19624228)
chr6 (5-215)||(29918024-29918232)
chr6 (5-220)||(32544272-32544486)
chr6 (11-203)||(10640364-10640555)
chr6 (7-284)||(26972091-26972366)
chr6 (5-215)||(14100373-14100582)
chr6 (1-223)||(15302203-15302424)
chr6 (1-181)||(18378317-18378496)
chr6 (5-304)||(26943583-26943867)
chr6 (16-236)||(18435574-18435793)
chr6 (25-215)||(19688793-19688980)
chr6 (5-181)||(20730671-20730846)
chr6 (10-220)||(22802153-22802360)
chr6 (28-221)||(34451595-34451787)
chr6 (1-66)||(25594071-25594136)
chr6 (1-182)||(16265116-16265296)
chr6 (5-217)||(15954710-15954919)
chr6 (245-321)||(19688979-19689055)
chr6 (5-65)||(22076489-22076549)
chr6 (10-65)||(21235137-21235192)
chr6 (5-65)||(12423268-12423328)
chr6 (257-321)||(15987469-15987533)
chr6 (5-65)||(16336134-16336194)
chr6 (5-65)||(16877220-16877280)
chr6 (5-220)||(19832962-19833175)
chr6 (231-296)||(10640288-10640353)
chr6 (5-65)||(12349000-12349060)
chr6 (257-321)||(18378528-18378592)
chr6 (273-321)||(19624253-19624301)
chr6 (5-65)||(20488000-20488060)
chr6 (5-65)||(21618251-21618311)
chr6 (5-65)||(33352008-33352068)
chr6 (274-321)||(12715245-12715292)
chr6 (134-220)||(21235248-21235332)
chr6 (245-287)||(19086379-19086421)
chr6 (245-287)||(33351806-33351848)
chr6 (13-65)||(17381536-17381588)
chr6 (273-321)||(19086441-19086489)
chr6 (273-321)||(23284854-23284902)
chr6 (273-321)||(24117119-24117167)
chr6 (278-321)||(13435828-13435871)
chr6 (274-321)||(34451494-34451541)
chr6 (245-287)||(17381659-17381701)
chr6 (245-287)||(19065904-19065946)
chr6 (5-63)||(19482759-19482817)
chr6 (245-287)||(19832879-19832921)
chr6 (245-287)||(32544497-32544539)
chr6 (246-287)||(16336384-16336425)
chr6 (273-321)||(14100283-14100331)
chr6 (11-63)||(17316609-17316661)
chr6 (5-65)||(19066100-19066160)
chr6 (273-321)||(20112524-20112572)
chr6 (243-287)||(20730581-20730625)
chr6 (265-301)||(22058412-22058448)
chr6 (247-287)||(34451546-34451586)
[»] chr3 (88 HSPs)
chr3 (1-321)||(49642600-49642919)
chr3 (1-287)||(14392878-14393161)
chr3 (4-287)||(29951310-29951592)
chr3 (4-287)||(30000464-30000746)
chr3 (12-287)||(52920419-52920692)
chr3 (5-287)||(6090738-6091019)
chr3 (1-284)||(13948338-13948620)
chr3 (1-287)||(15903200-15903486)
chr3 (1-287)||(20646156-20646442)
chr3 (5-284)||(20725093-20725368)
chr3 (5-287)||(28582112-28582394)
chr3 (1-287)||(31303388-31303676)
chr3 (3-223)||(17238858-17239077)
chr3 (5-321)||(12388697-12389025)
chr3 (1-180)||(41495001-41495179)
chr3 (1-223)||(37467335-37467556)
chr3 (10-236)||(38177566-38177791)
chr3 (1-223)||(12963021-12963242)
chr3 (5-220)||(2561194-2561408)
chr3 (10-223)||(49553425-49553637)
chr3 (5-220)||(16032531-16032743)
chr3 (10-287)||(18121493-18121770)
chr3 (1-167)||(13780576-13780741)
chr3 (5-223)||(12726166-12726383)
chr3 (5-182)||(40799880-40800056)
chr3 (1-236)||(16658541-16658775)
chr3 (13-223)||(14969341-14969550)
chr3 (12-211)||(19249361-19249558)
chr3 (5-220)||(47207712-47207925)
chr3 (11-220)||(47405362-47405568)
chr3 (1-223)||(19888880-19889100)
chr3 (10-215)||(18142696-18142900)
chr3 (5-236)||(11223569-11223797)
chr3 (25-187)||(13824095-13824256)
chr3 (11-287)||(46349717-46349991)
chr3 (142-287)||(25398147-25398290)
chr3 (11-220)||(20627372-20627578)
chr3 (1-66)||(22804115-22804180)
chr3 (210-287)||(41495184-41495261)
chr3 (5-65)||(11868275-11868335)
chr3 (5-65)||(25398348-25398408)
chr3 (10-220)||(2785075-2785283)
chr3 (5-140)||(12968312-12968446)
chr3 (5-65)||(14955433-14955493)
chr3 (5-121)||(53056765-53056880)
chr3 (233-287)||(13824265-13824319)
chr3 (11-65)||(46796460-46796514)
chr3 (247-315)||(12726090-12726158)
chr3 (5-65)||(21605747-21605807)
chr3 (12-60)||(23538264-23538312)
chr3 (5-177)||(29855415-29855587)
chr3 (273-321)||(52920695-52920743)
chr3 (10-65)||(21640878-21640933)
chr3 (76-223)||(26417616-26417762)
chr3 (10-65)||(33583240-33583295)
chr3 (245-287)||(24775390-24775432)
chr3 (245-287)||(40851188-40851230)
chr3 (245-287)||(49666288-49666330)
chr3 (257-321)||(38177509-38177574)
chr3 (245-286)||(46796266-46796307)
chr3 (273-321)||(6091022-6091070)
chr3 (269-321)||(16032766-16032818)
chr3 (5-65)||(21636763-21636823)
chr3 (5-65)||(24775627-24775687)
chr3 (5-65)||(30054310-30054370)
chr3 (273-321)||(31303679-31303727)
chr3 (273-321)||(37467592-37467640)
chr3 (257-321)||(40800100-40800164)
chr3 (25-65)||(50300249-50300289)
chr3 (278-321)||(15903494-15903537)
chr3 (228-287)||(16199683-16199742)
chr3 (228-287)||(22803972-22804031)
chr3 (10-65)||(49666498-49666553)
chr3 (257-287)||(9390964-9390994)
chr3 (245-287)||(11223792-11223834)
chr3 (245-287)||(11869297-11869339)
chr3 (245-287)||(12962973-12963015)
chr3 (245-287)||(14969558-14969600)
chr3 (245-287)||(21636552-21636594)
chr3 (245-287)||(30054114-30054156)
chr3 (249-287)||(33583494-33583532)
chr3 (249-287)||(33598114-33598152)
chr3 (245-287)||(50300446-50300488)
chr3 (5-62)||(5213583-5213640)
chr3 (273-321)||(17238775-17238823)
chr3 (5-65)||(22140770-22140830)
chr3 (273-321)||(22803922-22803970)
chr3 (273-321)||(41495264-41495312)
[»] chr1 (72 HSPs)
chr1 (1-287)||(33256146-33256429)
chr1 (1-287)||(33276318-33276601)
chr1 (5-287)||(22599975-22600256)
chr1 (1-315)||(19717526-19717837)
chr1 (3-287)||(20954266-20954549)
chr1 (5-287)||(22153863-22154144)
chr1 (1-236)||(21028795-21029029)
chr1 (1-236)||(26701973-26702207)
chr1 (1-321)||(28492177-28492482)
chr1 (1-223)||(12284425-12284646)
chr1 (11-287)||(35401821-35402094)
chr1 (1-321)||(1577869-1578171)
chr1 (1-223)||(10757423-10757645)
chr1 (5-287)||(38282573-38282853)
chr1 (9-321)||(48704214-48704538)
chr1 (5-287)||(2268537-2268814)
chr1 (11-220)||(32785798-32786005)
chr1 (1-215)||(22201601-22201814)
chr1 (5-236)||(1900351-1900581)
chr1 (11-287)||(22427151-22427425)
chr1 (11-287)||(23036322-23036595)
chr1 (1-287)||(21191672-21191943)
chr1 (14-220)||(17024825-17025029)
chr1 (1-196)||(12613700-12613892)
chr1 (1-223)||(30893094-30893316)
chr1 (5-182)||(39200890-39201066)
chr1 (5-185)||(29215803-29215982)
chr1 (11-182)||(2267101-2267271)
chr1 (5-223)||(36134196-36134410)
chr1 (10-182)||(22464706-22464878)
chr1 (10-202)||(16235174-16235365)
chr1 (110-240)||(7309928-7310058)
chr1 (10-220)||(2834701-2834908)
chr1 (5-66)||(30572203-30572264)
chr1 (5-205)||(25448443-25448640)
chr1 (5-287)||(48570026-48570305)
chr1 (5-65)||(21702820-21702880)
chr1 (5-65)||(35040172-35040232)
chr1 (5-65)||(46088995-46089055)
chr1 (5-58)||(10250992-10251045)
chr1 (273-321)||(30893352-30893400)
chr1 (10-65)||(2327454-2327509)
chr1 (245-288)||(46089224-46089267)
chr1 (11-118)||(18896559-18896665)
chr1 (275-321)||(20954196-20954242)
chr1 (247-296)||(12613579-12613628)
chr1 (273-321)||(12284729-12284777)
chr1 (5-65)||(14263465-14263525)
chr1 (5-65)||(21204937-21204997)
chr1 (13-65)||(42284642-42284694)
chr1 (5-65)||(44821559-44821619)
chr1 (10-65)||(7745104-7745159)
chr1 (274-321)||(16235053-16235100)
chr1 (10-65)||(21984607-21984662)
chr1 (274-321)||(36134465-36134512)
chr1 (245-287)||(2327218-2327260)
chr1 (193-223)||(12284648-12284678)
chr1 (245-287)||(12284684-12284726)
chr1 (5-63)||(19215618-19215676)
chr1 (245-287)||(21029024-21029066)
chr1 (245-287)||(21703057-21703099)
chr1 (5-63)||(23024794-23024852)
chr1 (245-287)||(23024989-23025031)
chr1 (245-287)||(42284847-42284889)
chr1 (245-287)||(44821354-44821396)
chr1 (10-51)||(7309830-7309871)
chr1 (5-65)||(21121078-21121138)
chr1 (5-65)||(21135174-21135234)
chr1 (75-119)||(21683157-21683201)
chr1 (273-321)||(22154164-22154212)
chr1 (247-287)||(25448343-25448383)
chr1 (5-65)||(37642254-37642314)
[»] chr8 (72 HSPs)
chr8 (25-287)||(33082876-33083135)
chr8 (1-287)||(39693530-39693815)
chr8 (1-321)||(17701740-17702057)
chr8 (1-321)||(18321011-18321315)
chr8 (1-287)||(16681176-16681459)
chr8 (5-286)||(19943234-19943516)
chr8 (1-236)||(19156191-19156425)
chr8 (1-287)||(29693310-29693595)
chr8 (1-287)||(19707501-19707783)
chr8 (5-264)||(16207305-16207563)
chr8 (1-287)||(20382267-20382550)
chr8 (1-286)||(24646333-24646617)
chr8 (1-287)||(16188979-16189262)
chr8 (1-224)||(602654-602876)
chr8 (1-295)||(17525592-17525885)
chr8 (1-223)||(12757698-12757919)
chr8 (3-287)||(17914456-17914739)
chr8 (1-223)||(18718996-18719217)
chr8 (129-321)||(22745609-22745801)
chr8 (12-283)||(23263488-23263757)
chr8 (5-287)||(17267473-17267751)
chr8 (1-202)||(43644891-43645090)
chr8 (30-241)||(18121026-18121236)
chr8 (1-250)||(17441716-17441963)
chr8 (1-223)||(18679810-18680031)
chr8 (5-220)||(30421368-30421581)
chr8 (7-287)||(21932884-21933164)
chr8 (5-220)||(23185166-23185378)
chr8 (74-287)||(20255439-20255649)
chr8 (5-287)||(17797421-17797701)
chr8 (5-207)||(18722597-18722798)
chr8 (5-207)||(18730942-18731143)
chr8 (5-207)||(18685348-18685549)
chr8 (5-220)||(15336028-15336240)
chr8 (5-220)||(15425093-15425305)
chr8 (5-220)||(15516397-15516609)
chr8 (5-287)||(9320567-9320849)
chr8 (12-209)||(22461588-22461783)
chr8 (16-209)||(19956289-19956482)
chr8 (1-66)||(25164065-25164130)
chr8 (5-65)||(40845479-40845539)
chr8 (10-185)||(1237641-1237815)
chr8 (10-65)||(22663120-22663175)
chr8 (11-65)||(22673783-22673837)
chr8 (5-65)||(6407725-6407785)
chr8 (5-65)||(14989543-14989603)
chr8 (11-234)||(24551279-24551499)
chr8 (245-287)||(18151552-18151594)
chr8 (245-287)||(18680037-18680079)
chr8 (245-286)||(22674015-22674056)
chr8 (5-65)||(18151738-18151798)
chr8 (243-287)||(24551524-24551568)
chr8 (5-65)||(45538531-45538591)
chr8 (274-321)||(17525550-17525597)
chr8 (273-304)||(19943519-19943550)
chr8 (257-296)||(19956213-19956252)
chr8 (190-287)||(3598218-3598316)
chr8 (245-287)||(6407938-6407980)
chr8 (245-287)||(13430523-13430565)
chr8 (245-287)||(14989347-14989389)
chr8 (245-287)||(19156420-19156462)
chr8 (245-287)||(21288616-21288658)
chr8 (245-287)||(36105447-36105489)
chr8 (245-287)||(40845260-40845302)
chr8 (245-287)||(43640011-43640053)
chr8 (250-287)||(24832943-24832980)
chr8 (129-220)||(6407839-6407927)
chr8 (5-65)||(13430720-13430780)
chr8 (273-321)||(16189282-16189330)
chr8 (273-321)||(19156465-19156513)
chr8 (5-65)||(43639782-43639842)
chr8 (5-65)||(45567993-45568053)
[»] scaffold0290 (2 HSPs)
scaffold0290 (1-287)||(18444-18729)
scaffold0290 (273-321)||(18393-18441)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-321)||(25764-26083)
[»] scaffold0771 (1 HSPs)
scaffold0771 (1-284)||(478-760)
[»] scaffold0120 (2 HSPs)
scaffold0120 (5-286)||(36599-36879)
scaffold0120 (5-286)||(42126-42406)
[»] scaffold0411 (1 HSPs)
scaffold0411 (1-287)||(12212-12497)
[»] scaffold0047 (3 HSPs)
scaffold0047 (1-220)||(9906-10123)
scaffold0047 (74-287)||(30299-30507)
scaffold0047 (274-321)||(30512-30559)
[»] scaffold0861 (1 HSPs)
scaffold0861 (16-287)||(4770-5040)
[»] scaffold0026 (4 HSPs)
scaffold0026 (1-287)||(60019-60302)
scaffold0026 (1-223)||(7929-8150)
scaffold0026 (74-315)||(151685-151906)
scaffold0026 (190-287)||(115712-115807)
[»] scaffold0084 (3 HSPs)
scaffold0084 (1-251)||(49335-49584)
scaffold0084 (1-236)||(32488-32722)
scaffold0084 (5-65)||(389-449)
[»] scaffold0359 (1 HSPs)
scaffold0359 (1-287)||(5515-5798)
[»] scaffold0005 (5 HSPs)
scaffold0005 (5-287)||(212361-212641)
scaffold0005 (74-287)||(6026-6234)
scaffold0005 (245-287)||(246086-246128)
scaffold0005 (274-321)||(5974-6021)
scaffold0005 (273-321)||(212644-212692)
[»] scaffold0116 (1 HSPs)
scaffold0116 (5-286)||(20795-21075)
[»] scaffold0227 (1 HSPs)
scaffold0227 (5-301)||(22683-22979)
[»] scaffold0146 (2 HSPs)
scaffold0146 (3-223)||(15122-15341)
scaffold0146 (273-321)||(15376-15424)
[»] scaffold0035 (3 HSPs)
scaffold0035 (1-287)||(19297-19580)
scaffold0035 (5-62)||(99252-99309)
scaffold0035 (75-116)||(29869-29910)
[»] scaffold0479 (1 HSPs)
scaffold0479 (5-315)||(9976-10269)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-266)||(14651-14913)
[»] scaffold0161 (3 HSPs)
scaffold0161 (1-220)||(9997-10216)
scaffold0161 (1-65)||(14816-14880)
scaffold0161 (273-321)||(9909-9957)
[»] scaffold0210 (1 HSPs)
scaffold0210 (11-223)||(1673-1884)
[»] scaffold0364 (3 HSPs)
scaffold0364 (1-220)||(6010-6227)
scaffold0364 (245-287)||(6236-6278)
scaffold0364 (273-321)||(6280-6328)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-266)||(1693-1955)
[»] scaffold0022 (7 HSPs)
scaffold0022 (1-286)||(159058-159356)
scaffold0022 (77-236)||(39503-39662)
scaffold0022 (77-236)||(137563-137722)
scaffold0022 (10-59)||(37414-37463)
scaffold0022 (10-59)||(135474-135523)
scaffold0022 (273-321)||(39702-39750)
scaffold0022 (273-321)||(137762-137810)
[»] scaffold1434 (1 HSPs)
scaffold1434 (74-287)||(611-822)
[»] scaffold0334 (1 HSPs)
scaffold0334 (28-287)||(9825-10081)
[»] scaffold0251 (1 HSPs)
scaffold0251 (3-236)||(7708-7940)
[»] scaffold0171 (3 HSPs)
scaffold0171 (5-223)||(27316-27533)
scaffold0171 (274-321)||(27217-27264)
scaffold0171 (245-287)||(27268-27310)
[»] scaffold0064 (2 HSPs)
scaffold0064 (5-208)||(43822-44023)
scaffold0064 (228-287)||(43728-43787)
[»] scaffold0243 (1 HSPs)
scaffold0243 (129-321)||(4782-4974)
[»] scaffold0426 (2 HSPs)
scaffold0426 (1-169)||(13574-13741)
scaffold0426 (245-287)||(13856-13898)
[»] scaffold0056 (5 HSPs)
scaffold0056 (12-284)||(36013-36281)
scaffold0056 (190-287)||(25498-25596)
scaffold0056 (245-287)||(34652-34694)
scaffold0056 (5-62)||(25712-25769)
scaffold0056 (5-65)||(34848-34908)
[»] scaffold0081 (1 HSPs)
scaffold0081 (5-209)||(40644-40846)
[»] scaffold0023 (1 HSPs)
scaffold0023 (11-218)||(103585-103791)
[»] scaffold0217 (4 HSPs)
scaffold0217 (5-223)||(19038-19255)
scaffold0217 (5-62)||(9567-9624)
scaffold0217 (243-287)||(9787-9831)
scaffold0217 (5-63)||(22177-22235)
[»] scaffold0261 (2 HSPs)
scaffold0261 (115-236)||(5813-5935)
scaffold0261 (271-321)||(5726-5776)
[»] scaffold0193 (3 HSPs)
scaffold0193 (1-215)||(15796-16011)
scaffold0193 (273-321)||(16070-16118)
scaffold0193 (228-287)||(16007-16066)
[»] scaffold0012 (1 HSPs)
scaffold0012 (5-287)||(215321-215601)
[»] scaffold0003 (1 HSPs)
scaffold0003 (5-220)||(89947-90159)
[»] scaffold0273 (1 HSPs)
scaffold0273 (5-223)||(5634-5849)
[»] scaffold0395 (1 HSPs)
scaffold0395 (195-286)||(13357-13448)
[»] scaffold0040 (1 HSPs)
scaffold0040 (11-223)||(1409-1619)
[»] scaffold0530 (1 HSPs)
scaffold0530 (14-66)||(2038-2090)
[»] scaffold0007 (1 HSPs)
scaffold0007 (106-236)||(143195-143325)
[»] scaffold1747 (1 HSPs)
scaffold1747 (5-66)||(1324-1385)
[»] scaffold1745 (1 HSPs)
scaffold1745 (5-66)||(26-87)
[»] scaffold0485 (1 HSPs)
scaffold0485 (178-266)||(9252-9338)
[»] scaffold0025 (3 HSPs)
scaffold0025 (243-304)||(74824-74885)
scaffold0025 (162-265)||(74730-74831)
scaffold0025 (11-58)||(74594-74641)
[»] scaffold0043 (1 HSPs)
scaffold0043 (11-287)||(78205-78464)
[»] scaffold1359 (3 HSPs)
scaffold1359 (5-185)||(580-759)
scaffold1359 (5-65)||(1799-1859)
scaffold1359 (245-287)||(511-553)
[»] scaffold0439 (1 HSPs)
scaffold0439 (10-220)||(6632-6839)
[»] scaffold0015 (2 HSPs)
scaffold0015 (5-65)||(60810-60870)
scaffold0015 (245-287)||(61033-61075)
[»] scaffold0176 (1 HSPs)
scaffold0176 (11-65)||(9168-9222)
[»] scaffold0387 (1 HSPs)
scaffold0387 (5-65)||(7388-7448)
[»] scaffold0280 (1 HSPs)
scaffold0280 (5-65)||(2774-2834)
[»] scaffold0249 (2 HSPs)
scaffold0249 (5-65)||(17809-17869)
scaffold0249 (245-287)||(17614-17656)
[»] scaffold0247 (1 HSPs)
scaffold0247 (5-65)||(25443-25503)
[»] scaffold0473 (2 HSPs)
scaffold0473 (245-288)||(2550-2593)
scaffold0473 (5-62)||(2738-2795)
[»] scaffold0275 (1 HSPs)
scaffold0275 (245-287)||(8513-8555)
[»] scaffold0066 (2 HSPs)
scaffold0066 (180-250)||(60729-60799)
scaffold0066 (273-321)||(60657-60705)
[»] scaffold0028 (1 HSPs)
scaffold0028 (11-65)||(5646-5700)
[»] scaffold0908 (1 HSPs)
scaffold0908 (5-65)||(3939-3999)
[»] scaffold0211 (1 HSPs)
scaffold0211 (5-65)||(15666-15726)
[»] scaffold0016 (1 HSPs)
scaffold0016 (243-287)||(941-985)
[»] scaffold0011 (2 HSPs)
scaffold0011 (245-285)||(65270-65310)
scaffold0011 (5-65)||(164990-165050)
[»] scaffold0414 (1 HSPs)
scaffold0414 (5-44)||(7221-7260)
[»] scaffold0471 (1 HSPs)
scaffold0471 (245-287)||(3564-3606)
[»] scaffold0527 (2 HSPs)
scaffold0527 (164-220)||(33-87)
scaffold0527 (164-220)||(8096-8150)
[»] scaffold1331 (1 HSPs)
scaffold1331 (25-65)||(1743-1783)
[»] scaffold0352 (1 HSPs)
scaffold0352 (5-65)||(865-925)
[»] scaffold0269 (1 HSPs)
scaffold0269 (5-65)||(7292-7352)
[»] scaffold0132 (1 HSPs)
scaffold0132 (5-65)||(38129-38189)
[»] scaffold0045 (2 HSPs)
scaffold0045 (243-287)||(87435-87479)
scaffold0045 (5-65)||(87644-87704)


Alignment Details
Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 3 - 321
Target Start/End: Original strand, 40846098 - 40846415
Alignment:
Q  3 acaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttg 102  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||||||||||||    
T  40846098 acaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaag-caagcatccaatgctttcaacttcatttg 40846196  T
Q  103 aattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagccttt-gaagctttaagtctctcatcttctgatg 201  Q
    ||||||||||||||||||| ||||| |||||||||||||| || || ||| ||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  40846197 aattagtcgttgcttcactttcctggtcttctgcaatgct-aggcgtgattaaatccattgaacagccttttgaagctttaagtctctcatcttctgatg 40846295  T
Q  202 aacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgctt 301  Q
    |||||||||||| |||||||||  | |||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||    
T  40846296 aacttcagcttccggtgatcttcagcttctgatgagatgcttctgatgaacttgtttctgatgacgtcatcacttcaggagcacttttcttcagatgctt 40846395  T
Q  302 caattttcctttttgatgat 321  Q
    |||  |||||||||| ||||    
T  40846396 caagcttcctttttgttgat 40846415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 45833395 - 45833676
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||         ||||||||||||| ||||| | | ||  ||    
T  45833395 aaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttaaaagaaa-aagcatccaatgcattcaaatactttcaaa 45833493  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||  ||||||| ||||| |   |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||||| |||||||||    
T  45833494 atagaagttgcttaactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaac 45833593  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |  ||||||||||||||||| | |||||||||||||| |||||| |||||| |||||||||| ||||||||||| ||||||||    
T  45833594 tagagcttctggtgatctttagcttctgatgagatgcttatgataaacttgcttctgatgacgtcatcacttcaagagcactt 45833676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 12811289 - 12810973
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||        |||||||||||||||||||| | | ||    
T  12811289 acacaaactgagtagtggagatagtggttgtacacttcgtacaattttactttgtcaacgctatt----agaacaagcatccaatgccttcaaatccttt 12811194  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || ||||||||||||||||||     ||||||||||||||||||||| |  ||||||| |||||| |||||||||||||||||||  ||||| || ||    
T  12811193 caaaatagtcgttgcttcactctttcagtcttctgcaatgcttagacgaaactaaatccattgaacaacctttgaagctttaagtcttgcatctcctaat 12811094  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgct 300  Q
    |||||  |||||||||||||||| |  | |||||||||||| | ||||||||||| || ||||||| | |||||||||| |||||||||  |||||||||    
T  12811093 gaactagagcttctggtgatcttctactactgatgagatgcttctgatgaacttgcttttgatgacgttatcacttcagaagcacttctgctcagatgct 12810994  T
Q  301 tcaattttcctttttgatgat 321  Q
     |||  |||||||||| ||||    
T  12810993 acaagcttcctttttgttgat 12810973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 5 - 296
Target Start/End: Original strand, 6641685 - 6641972
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||       |||| ||| ||||||||||| | | ||||||    
T  6641685 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagtatcaaatgccttcaaatccttttgaa 6641783  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
    |||| ||||| |||||||| |||||||||| ||||||| || |  ||| ||||||  |||||| ||||||||||||||| |||||||||||||||||||     
T  6641784 ttagccgttgtttcactcttctgatcttctacaatgct-aggcatgattaaatcctttgaacaacctttgaagctttaaatctctcatcttctgatgaaa 6641882  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcaga 296  Q
    |||||||||||||||  | ||| |||||||||| ||| | ||||||||||| || ||||||| ||||||||||||||||||||  |||||||    
T  6641883 ttcagcttctggtga--tattgcttctgatgaggtgcttctgatgaacttgcttatgatgacgtcatcacttcaggagcacttgacttcaga 6641972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 74 - 287
Target Start/End: Original strand, 15139296 - 15139510
Alignment:
Q  74 caagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagccttt 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||| |||||| |||||    
T  15139296 caagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctcctggtcttctgcaatgcttaaacgagattaaatccattgaacaaccttt 15139395  T
Q  174 gaagctttaagtctctcatcttctgatgaac-ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatc 272  Q
    ||| |||||||||| |||||||||||||||| || ||||||||||||||||  | |||||| ||| ||| | | ||||||||| ||| || |||||||||    
T  15139396 gaatctttaagtctatcatcttctgatgaacttttagcttctggtgatcttcagcttctgacgaggtgcttctaatgaacttgcttccgaagacatcatc 15139495  T
Q  273 acttcaggagcactt 287  Q
    |||||  ||||||||    
T  15139496 acttctagagcactt 15139510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 11 - 266
Target Start/End: Complemental strand, 37435639 - 37435387
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    |||||||||| || ||||||||||||||||||||| ||||| |||||||||||||        |||||||||||||||||||| | | ||  || |||||    
T  37435639 agtagtggaggtagtggttgtacacttcgtacaatagtactatgtcaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 37435541  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagc 210  Q
    ||||||||||||| |  |||||||||||||||| |||||||| ||||||| |||||| |||||||||||||||||||  ||||| |||||||||||||||    
T  37435540 gttgcttcactcttccaatcttctgcaatgcttggacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaacttcagc 37435441  T
Q  211 ttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgac 266  Q
    |||||||||||  |||  ||||||||||||| | ||||||||||| ||||||||||    
T  37435440 ttctggtgatc--ttgcctctgatgagatgcttctgatgaacttgcttctgatgac 37435387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 287
Target Start/End: Complemental strand, 14605017 - 14604737
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||| | | ||| ||    
T  14605017 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatccaatgctttcaaatccttttaaa 14604919  T
Q  105 t-tagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaa 203  Q
      |||| ||||||||||||| ||  ||||||||||||||||||||||||  ||||||  ||| |||||||||||||||||||||   |||| ||||||||    
T  14604918 aatagttgttgcttcactcttctagtcttctgcaatgcttagacgagattgaatccatagaatagcctttgaagctttaagtcttggatctcctgatgaa 14604819  T
Q  204 cttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
     || |||||||| |||||  ||| |||||||||||||| | ||||||||||| |||||||||| |||| |||||||||||||||    
T  14604818 gtttagcttctgatgatc--ttgcttctgatgagatgcttctgatgaacttgcttctgatgacgtcattacttcaggagcactt 14604737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 23750519 - 23750756
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||||       |||||||| |||||||| |||||||||    
T  23750519 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttg---acgcacttcataaaaacaagcatcaaatgcctttaacttcatt 23750615  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcc-tttgaagctttaagtctctcatcttctga 199  Q
    ||||  ||||||||||||||||||||| ||||||||| ||| ||| || ||| ||||||| |||||| || |||||||||||||||||  ||||| ||||    
T  23750616 tgaagcagtcgttgcttcactctcctggtcttctgcagtgc-taggcgtgattaaatccattgaacaaccttttgaagctttaagtcttgcatctcctga 23750714  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatgagatgc 241  Q
    |||||||||||||||||| ||||||   ||||||||||||||    
T  23750715 tgaacttcagcttctggttatctttaacttctgatgagatgc 23750756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 2 - 287
Target Start/End: Original strand, 12601099 - 12601381
Alignment:
Q  2 cacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcattt 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||       |||||||||||||||||||| | | ||     
T  12601099 cacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaa-caagcatccaatgccttcaaatcctttc 12601197  T
Q  102 gaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatg 201  Q
     || ||||||||| |||||| | |   |||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||  |||||   ||||    
T  12601198 aaaatagtcgttgattcactattcaagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgacgctttaagtcttgcatctcgagatg 12601297  T
Q  202 aacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    | ||| | ||||| ||||||  ||| |||||||||||||| | | |||||  || || ||||||||||||||||||||||||||||    
T  12601298 agctttaacttctagtgatc--ttgcttctgatgagatgcttcttatgaaaatgcttttgatgacatcatcacttcaggagcactt 12601381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 16632437 - 16632720
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||| | |||||| || ||||||||||||||||||||||||||||||||||||||||||       |||| ||||||||||||||| |   ||    
T  16632437 acacaaactgattggtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagaatccaatgccttcaaatctttt 16632535  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || ||||||||| |||||||| |   |||||||||||||||| ||||||| ||||||| |||||| |||||||||||||||||||  ||||| |||||    
T  16632536 caaaatagtcgttgattcactcttccagtcttctgcaatgcttatacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgat 16632635  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||| ||||||| ||||||  ||| |||||||||||||| | |||||| |||| ||||||||   |||||||||||| |||||||    
T  16632636 gaactttagcttctagtgatc--ttgcttctgatgagatgcttttgatgaccttgcttctgatggtgtcatcacttcagaagcactt 16632720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 29680658 - 29680410
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||| | | ||    
T  29680658 acacatactgagtagtggagataatgattgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatccaatgctttcaaatccttt 29680560  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||||| |   ||||||||||||||||||| |||| ||||||| |||||| |||||| ||||||||||||  ||||| ||| |    
T  29680559 caaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacaagattaaatccattgaacaacctttggagctttaagtcttgcatctcctggt 29680460  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatga 250  Q
     ||||  ||||||||||||||||  | |||||||||||||| | ||||||    
T  29680459 aaactagagcttctggtgatcttcagcttctgatgagatgcttctgatga 29680410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 13 - 220
Target Start/End: Original strand, 19884711 - 19884916
Alignment:
Q  13 tagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgt 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| | | ||  || |||||||    
T  19884711 tagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaactagtcgt 19884809  T
Q  113 tgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagctt 212  Q
    ||||||||| | |   |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||||| |||||||||| ||||||    
T  19884810 tgcttcacttttccagtcttctgcaatgcttagacgagattaaatcca-tgaacatcctttgaagctttaagtcttgcatctcctgatgaactacagctt 19884908  T
Q  213 ctggtgat 220  Q
    ||||||||    
T  19884909 ctggtgat 19884916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 55380287 - 55380508
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||       |||||||||||||| ||||| | | ||    
T  55380287 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttc-aaagaacaagcatccaatgctttcaaatccttt 55380385  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcc-tttgaagctttaagtctctcatcttctga 199  Q
      || |||| ||||||||||||| ||| |||||||||||| |||| |  ||| ||||||| ||||||||| |||||||||||||||||  ||||| || |    
T  55380386 caaaatagttgttgcttcactcttctggtcttctgcaatg-ttaggcatgattaaatccattgaacagccttttgaagctttaagtcttgcatctcctaa 55380484  T
Q  200 tgaacttcagcttctggtgatctt 223  Q
    |||||||||||||||| |||||||    
T  55380485 tgaacttcagcttctgatgatctt 55380508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 56034579 - 56034792
Alignment:
Q  9 tgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattag 108  Q
    ||||||||||||||| | |||||||| ||   |||||||||||||||||||||||||        ||| |||||||||||||||| ||  ||  || |||    
T  56034579 tgagtagtggagatagtagttgtacattttagacaattgtactttgtcaacgctctt-tgaagaacaaacatccaatgccttcaaattatttcaaaatag 56034677  T
Q  109 tcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttca 208  Q
    ||||||||||||||| |   ||||||||||||||| |||||||| ||||||| ||||||| ||||||||||||||||||  |||||||||||||||||||    
T  56034678 tcgttgcttcactcttccagtcttctgcaatgcttggacgagattaaatccattgaacagtctttgaagctttaagtcttgcatcttctgatgaacttca 56034777  T
Q  209 gcttctggtgatctt 223  Q
    |||||||||||||||    
T  56034778 gcttctggtgatctt 56034792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 19621175 - 19620962
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||       |||||||||||||| ||||| | | ||    
T  19621175 acacaaactgaatagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcatagaa-caagcatccaatgctttcaaatccttt 19621077  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || ||||||||||||||||   ||| |||| |||||||||| ||||||||  |||||| |||||| ||||||||||||||| |||  ||||| |||||    
T  19621076 caaaatagtcgttgcttcacttctctggtcttttgcaatgcttggacgagattgaatccattgaacaacctttgaagctttaactcttgcatctcctgat 19620977  T
Q  201 gaacttcagcttctg 215  Q
    |||||||||||||||    
T  19620976 gaacttcagcttctg 19620962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 5 - 236
Target Start/End: Complemental strand, 22675630 - 22675402
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||        |||||||| ||||||||||| | | ||  ||    
T  22675630 aaactgagtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctt-tgaagaacaagcatcaaatgccttcaaatcctttcaaa 22675532  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||||||||||||||| | ||  |||||||||||||||||||||||| ||||||| |||||||||||||||||||||  | |  ||||| || ||||||    
T  22675531 ctagtcgttgcttcacttttctagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagcttta--tgttgcatctcctaatgaac 22675434  T
Q  205 ttcagcttctggtgatcttttgattctgatga 236  Q
    | |||||||||| ||| ||||| |||||||||    
T  22675433 tgcagcttctggggattttttgcttctgatga 22675402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 17247245 - 17247524
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| |||||||||||  | |||||||||||||||||||||||||||||||||| | ||||        ||| ||| |||||||||||| | | ||  ||    
T  17247245 aaacagagtagtggaggcagtggttgtacacttcgtacaattgtactttgtcaatgttctt-tgaagaacaaacattcaatgccttcaaatcctttcaaa 17247343  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
    ||||||||||||||||| |||  |||||||||||||||||||||||||  |||||| |||||| | ||||||||||||||    |||||| |||||||||    
T  17247344 ttagtcgttgcttcactttcca-atcttctgcaatgcttagacgagattgaatccattgaacaacttttgaagctttaag--attcatctcctgatgaac 17247440  T
Q  205 ttcagcttctggtgatcttttgattctgatg-agatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    | |||||||||||||| ||  | |||||||| |  ||| | ||||||||| | |||||||||||||| ||||||||||||||||    
T  17247441 tgcagcttctggtgattttcagcttctgatgaacttgcttctgatgaactcgcttctgatgacatcaccacttcaggagcactt 17247524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 19666369 - 19666567
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||       |||| || |||||| ||||| | | ||    
T  19666369 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaactctcttc-aaagaacaagtattcaatgctttcaaatccttt 19666467  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||||| |   |||||||||||||||||||||||| ||||||| |||| | ||||| |||||||||||||  ||||| |||||    
T  19666468 caaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaataacctttcaagctttaagtcttgcatctcctgat 19666567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 37985726 - 37985541
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||       |||||||||||||||||||| | | ||    
T  37985726 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttc-aaagaacaagcatccaatgccttcaaatccttt 37985628  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtct 187  Q
      || |||| ||||||||||| |     |||||||| ||||||||| ||||| ||||||| |||||| |||||||||||||||||||    
T  37985627 caaaatagttgttgcttcactttttcagtcttctgcgatgcttagatgagattaaatccattgaacaacctttgaagctttaagtct 37985541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 3395587 - 3395808
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||       | |||||||||||| ||||| | | ||    
T  3395587 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttc-aaagaactagcatccaatgctttcaaatccttt 3395685  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||| |     | ||||||||||||||||||| ||  |||||| |||||| | ||||||| |||||||||  ||||| |||||    
T  3395686 caaaatagtcgttgcttcactttttcagttttctgcaatgcttagacgatatttaatccattgaacaacttttgaagatttaagtcttgcatctcctgat 3395785  T
Q  201 gaacttcagcttctggtgatctt 223  Q
    |||||  ||||||| ||||||||    
T  3395786 gaactatagcttctagtgatctt 3395808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 9140909 - 9141094
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||       |||||||||||||||||||| | | ||    
T  9140909 acacaaactgagtagtgaagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttc-aaagaacaagcatccaatgccttcaaatccttt 9141007  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtct 187  Q
      || |||||||||||| ||| | |   |||||| |||||||||||||||||  |||||| |||||| || ||||||||||||||||    
T  9141008 caaaatagtcgttgctttacttttccagtcttctacaatgcttagacgagattgaatccattgaacaacccttgaagctttaagtct 9141094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 14904470 - 14904236
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||| |||||||||||||||||  |||||||||||||||||| ||||||||||||||        |||||||||||| |||||| | | ||    
T  14904470 acacaaactgagtggtggagataatggttgtttacttcgtacaattgtactatgtcaacgctcttcaaagaat-aagcatccaatgtcttcaaatccttt 14904372  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || | | |||||||||||| | |   ||||||||||||| |||||||||| ||||||  |||| ||| |||||||||||| ||||  ||||| |||||    
T  14904371 caaaatggacgttgcttcacttttccagtcttctgcaatgcctagacgagattaaatcctttgaatagcttttgaagctttaggtcttgcatctcctgat 14904272  T
Q  201 gaacttcagcttctggtgatcttttgattctgatga 236  Q
    ||||| || ||||||||||||||  |||| ||||||    
T  14904271 gaactacaacttctggtgatcttcagattttgatga 14904236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 2 - 236
Target Start/End: Complemental strand, 19911994 - 19911760
Alignment:
Q  2 cacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcattt 101  Q
    ||||||||||||||||||| || ||||||||||||| |||||||| |||| |||||||||||||         ||||||||||||| ||||| | | ||     
T  19911994 cacaaactgagtagtggaggtagtggttgtacactttgtacaattatactatgtcaacgctctttcaaagaataagcatccaatgctttcaaatcctttc 19911895  T
Q  102 gaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatg 201  Q
     || ||||||||||||||||   ||| |||| |||||||||| ||||||||  |||| | |||||| ||||| |||||||||||||  ||||| ||||||    
T  19911894 aaaatagtcgttgcttcactgctctggtcttttgcaatgcttggacgagattgaatctattgaacaacctttaaagctttaagtcttgcatctcctgatg 19911795  T
Q  202 aacttcagcttctggtgatcttttgattctgatga 236  Q
    |||| || |||||| |||||||  | |||||||||    
T  19911794 aactacaacttctgatgatcttcagcttctgatga 19911760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 217
Target Start/End: Original strand, 10072942 - 10073146
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||        ||||| |||||||||||||| | | ||  || |||      
T  10072942 agtagtggagatagtggttgtacacttcgtacatttgtactttgtcaacgctctt-tgaataacaagcctccaatgccttcaaatcctttcaaactagca 10073040  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagc 210  Q
    ||||||||||| | |   |||||||| ||||||| ||||||| |||||| ||||||| |||||||||||||||||||  ||||| |||||||||| | ||    
T  10073041 gttgcttcacttttccagtcttctgctatgcttaaacgagattaaatcc-atgaacaacctttgaagctttaagtcttgcatctcctgatgaactactgc 10073139  T
Q  211 ttctggt 217  Q
    |||||||    
T  10073140 ttctggt 10073146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 129 - 241
Target Start/End: Original strand, 23123555 - 23123667
Alignment:
Q  129 tcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgat 228  Q
    |||||| |||| |||||||||||| |||| || ||||||  ||||||||||||||||||  ||||| |||||||||||||||||||||||||||| || |    
T  23123555 tcttctacaatacttagacgagattaaattcattgaacaatctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttctgct 23123654  T
Q  229 tctgatgagatgc 241  Q
    |||||||||||||    
T  23123655 tctgatgagatgc 23123667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 25 - 220
Target Start/End: Complemental strand, 13576204 - 13576012
Alignment:
Q  25 tggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctc 124  Q
    ||||| ||||||||||||| ||||||| |||||||||||||        |||||||| ||||||||||| | | ||  || ||| ||||||||||||||     
T  13576204 tggttttacacttcgtacagttgtactatgtcaacgctctt-tgaagaacaagcatctaatgccttcaaatcctttcaaactaggcgttgcttcactctt 13576106  T
Q  125 ctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgat 220  Q
    |   |||||||||||||||||||||||| ||||||| ||||||| |||||||||||||  | |  ||||| |||||||||| ||||||||||||||    
T  13576105 ccagtcttctgcaatgcttagacgagattaaatccattgaacaggctttgaagcttta--tgttgcatctcctgatgaactgcagcttctggtgat 13576012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 413008 - 413215
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    |||||||||||  | ||||||||||||||||||||| |||||||||||||||||||        ||| ||| |||||||||||| | | ||  ||||||     
T  413008 gagtagtggaggcagtggttgtacacttcgtacaatcgtactttgtcaacgctctt-tgaagaacaaacattcaatgccttcaaatcctttcaaattagc 413106  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
    |||||||||||| | |   ||||||||||||||||||||||||  |||||| |||||| | ||||||||||||||  |   |||| |||||||||| |||    
T  413107 cgttgcttcacttttcgagtcttctgcaatgcttagacgagattgaatccattgaacaacttttgaagctttaag--ttgaatctcctgatgaactgcag 413204  T
Q  210 cttctggtgat 220  Q
    |||||||||||    
T  413205 cttctggtgat 413215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 3483742 - 3483952
Alignment:
Q  25 tggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctc 124  Q
    ||||||| | |||||||||||||||||||||||||||||||         ||||||||||||||||||| | | ||  || |||||||||||||||| |     
T  3483742 tggttgtgcgcttcgtacaattgtactttgtcaacgctctttgaagaat-aagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactttt 3483840  T
Q  125 ctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcttt 224  Q
    |   |||||||||||||||||||||||| ||||||| |||| ||  |||||||||||||||||  |||||  | |||||||  | ||||||||||||||     
T  3483841 ccagtcttctgcaatgcttagacgagattaaatccattgaatagtttttgaagctttaagtcttgcatctcttaatgaactataacttctggtgatcttc 3483940  T
Q  225 tgattctgatga 236  Q
     | |||||||||    
T  3483941 agcttctgatga 3483952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 74 - 287
Target Start/End: Original strand, 14833465 - 14833673
Alignment:
Q  74 caagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagccttt 173  Q
    |||||||||||||| ||||| | | ||  || |||||||||||||||||| |   ||||||||||||||||||||||||  |||| | |||||| |||||    
T  14833465 caagcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattgaatctattgaacatccttt 14833564  T
Q  174 gaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatca 273  Q
    ||||||||||||||  ||||| |||||||| | || ||||||| ||||||  | ||||     ||||| | | |||||| || |||||||||| | ||||    
T  14833565 gaagctttaagtcttgcatctcctgatgaattacaacttctggagatcttcagcttct-----gatgcttcttatgaacctgcttctgatgactttatca 14833659  T
Q  274 cttcaggagcactt 287  Q
    ||||||||||||||    
T  14833660 cttcaggagcactt 14833673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 224
Target Start/End: Complemental strand, 41114811 - 41114663
Alignment:
Q  75 aagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttg 174  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||| ||| ||  |||| |||||||   || |  ||| ||||| | |||||| ||||||    
T  41114811 aagcatccaatgccttcaaattcatttgaaatagccgttgcttcattcttctagtcttttgcaatgac-aggcttgattaaatcaattgaacaacctttg 41114713  T
Q  175 aagctttaagtctctcatcttctgatgaacttcagcttctggtgatcttt 224  Q
    |||||| || ||||||| |||||||||| |||||||| ||| ||||||||    
T  41114712 aagcttcaattctctcagcttctgatgatcttcagctcctgatgatcttt 41114663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 202
Target Start/End: Original strand, 11915721 - 11915896
Alignment:
Q  25 tggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctc 124  Q
    ||||||||||||| |||||||||| ||||  |||||||||||        ||||||||||||||||||| | |||||||| ||||||||||||||||||     
T  11915721 tggttgtacactttgtacaattgtccttttccaacgctcttcaaagaat-aagcatccaatgccttcaaatccatttgaaatagtcgttgcttcactctt 11915819  T
Q  125 ctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatga 202  Q
     |  ||||||||||||  | | || ||| |||||   ||| ||||||||||||||| || ||||||| ||||||||||    
T  11915820 ttagtcttctgcaatg-atgggcgtgattaaatcatttgagcagcctttgaagcttcaattctctcagcttctgatga 11915896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 55380499 - 55380575
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||| |||| |||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||| ||||    
T  55380499 tgatgatcttgcttctgatgacgtcatcacttcaggagcacttctcttcagacgcttcaagcttcctttttgttgat 55380575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 17540396 - 17540455
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctct 64  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||    
T  17540396 aaacagagtagtggagataatggttgtacacttcgtacaattgtcctttttcaacactct 17540455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 185
Target Start/End: Original strand, 29121371 - 29121550
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||  |||||||||||||||||||        |||||||||| ||||||||| | | ||  ||    
T  29121371 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt-taaagaacaagcatccagtgccttcaaatcctttcaaa 29121469  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagt 185  Q
     |||||||||||||||| |     |||||||||||  ||||||||| |  |||||| | |||||| |||||||| ||||||    
T  29121470 atagtcgttgcttcactttttcagtcttctgcaatctttagacgaggttgaatccattaaacagcttttgaagccttaagt 29121550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 162 - 287
Target Start/End: Original strand, 22089745 - 22089869
Alignment:
Q  162 tgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctg 261  Q
    |||||| |||||||||||| || ||| |||||||||||||| ||| ||||||||||||||||    |||||||||| | | | ||||| ||||| |||      
T  22089745 tgaacaacctttgaagctt-aattctttcatcttctgatgatctttagcttctggtgatcttcaacttctgatgaggtacttctgatgcacttgcttcga 22089843  T
Q  262 atgacatcatcacttcaggagcactt 287  Q
    ||||| | ||||||||||||||||||    
T  22089844 atgacgttatcacttcaggagcactt 22089869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 6517486 - 6517546
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  6517486 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 6517546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 54679931 - 54680141
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||  |||||||||||| ||||||        ||| |||||||||||||||| | | ||  ||    
T  54679931 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctctt-tgaagaacaaacatccaatgccttcaaatcctttcaaa 54680029  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||| ||||||||||| | |   |||||||||||  ||||||||| |  |  ||| | |||||| ||||||||||||||  |  ||||| |||||||||    
T  54680030 atagttgttgcttcacttttccagtcttctgcaatcattagacgagtttga--ccattaaacagcttttgaagctttaag--ttgcatctcctgatgaac 54680125  T
Q  205 ttcagcttctggtgat 220  Q
    | ||||||||||||||    
T  54680126 tgcagcttctggtgat 54680141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 8105893 - 8105935
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  8105893 tgatgaacttgcttctgatgacatcatcacttcaggagcactt 8105935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 10692852 - 10693117
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || |||||||||||||| |||||  ||||||||| |||||||||        |||||||||||||||||||| | | ||  ||    
T  10692852 aaacagagtagtggaggtagtggttgtacacttcatacaaacgtactttgtaaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaa 10692950  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||| ||||||||||| | |   |||||||||||  ||||||||| |  |||||  | |||| | |||||||||||||||  |  |||| |||||||||    
T  10692951 atagttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacaacttttgaagctttaagttgc--atctcctgatgaac 10693048  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    | ||||||||||||||        ||| |      || | ||||||||||| |||||||||| ||||||||||||||||||||    
T  10693049 tacagcttctggtgat--------tctca------gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 10693117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 10906618 - 10906883
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || |||||||||||||| |||||  ||||||||| |||||||||        |||||||||||||||||||| | | ||  ||    
T  10906618 aaacagagtagtggaggtagtggttgtacacttcatacaaacgtactttgtaaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaa 10906716  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||| ||||||||||| | |   |||||||||||  ||||||||| |  |||||  | |||| | |||||||||||||||  |  |||| |||||||||    
T  10906717 atagttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacaacttttgaagctttaagttgc--atctcctgatgaac 10906814  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    | ||||||||||||||        ||| |      || | ||||||||||| |||||||||| ||||||||||||||||||||    
T  10906815 tacagcttctggtgat--------tctca------gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 10906883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 3105529 - 3105469
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||||||||||   |||| |||||||||||||    
T  3105529 aaacagagtagtggagatagtggttgtacacttcgtacaaacatactatgtcaacgctctt 3105469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 8105638 - 8105698
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || |||||||||| |||||||||  |||||||||||||||||||    
T  8105638 aaacagagtagtggaggtagtggttgtacatttcgtacaaacgtactttgtcaacgctctt 8105698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 16853504 - 16853564
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || |||||||||||||| ||||  ||||||||||||||||||||    
T  16853504 aaacagagtagtggaggtagtggttgtacacttcatacagatgtactttgtcaacgctctt 16853564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 17398784 - 17398724
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || ||||||||||||||||||||  ||||| |||||||||||||    
T  17398784 aaacagagtagtggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 17398724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 37435348 - 37435300
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  37435348 acttcaggagcacttctcttcagatgcttcaagcttcctttttgttgat 37435300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 56533172 - 56533112
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||  || ||||||||||||||||||||  |||||||||||||||||||    
T  56533172 aaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt 56533112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 8685548 - 8685509
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgta 49  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  8685548 gagtagtggagatagtggttgtacacttcgtacaattgta 8685509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 3499535 - 3499493
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| ||||||||||||||||||||||| |||||||    
T  3499535 tgatgaacttgcttctgatgacatcatcacttcagaagcactt 3499493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 14571248 - 14571290
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  14571248 tgatgaacttgcttctgatgacgtcatcacttcaggagcactt 14571290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 16940026 - 16940075
Alignment:
Q  14 agtggagataatggttgtacacttcgtacaattgtactttgtcaacgctc 63  Q
    |||||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  16940026 agtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctc 16940075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 11901257 - 11901301
Alignment:
Q  75 aagcatccaatgccttcaacttcatttgaattagtcgttgcttca 119  Q
    |||||||||||||||||||  || |||||||||||||||||||||    
T  11901257 aagcatccaatgccttcaaaatcttttgaattagtcgttgcttca 11901301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 22190847 - 22190907
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||  || ||||||||||||||||||||  ||||| |||||||||||||    
T  22190847 aaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 22190907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 38513899 - 38513939
Alignment:
Q  25 tggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  38513899 tggttgtacacttcgtacaatcgtactatgtcaacgctctt 38513939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 1672395 - 1672450
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    ||||||||||| || ||||||||||||||||||||  ||| |||||||||| ||||    
T  1672395 gagtagtggaggtagtggttgtacacttcgtacaaacgtattttgtcaacgttctt 1672450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 1674870 - 1674925
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    ||||||||||| || ||||||||||||||||||||  ||| |||||||||| ||||    
T  1674870 gagtagtggaggtagtggttgtacacttcgtacaaacgtattttgtcaacgttctt 1674925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 321
Target Start/End: Original strand, 14833678 - 14833725
Alignment:
Q  274 cttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||| ||||    
T  14833678 cttcaggagcacttcgcttcagatgcttcaagttttctttttgttgat 14833725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 16632728 - 16632771
Alignment:
Q  278 aggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||||||||||  |||||||||| ||||    
T  16632728 aggagcacttctcttcagatgcttcaagcttcctttttgttgat 16632771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 17398571 - 17398528
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcacttc 288  Q
    ||||||||||| |||||||||| ||||||||||| |||||||||    
T  17398571 tgatgaacttgcttctgatgacgtcatcacttcaagagcacttc 17398528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 17788152 - 17788109
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtacttt 53  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||    
T  17788152 gagtagtggagatagtggttgtacacatcgtacaattgtccttt 17788109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 3499742 - 3499704
Alignment:
Q  25 tggttgtacacttcgtacaattgtactttgtcaacgctc 63  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  3499742 tggttgtacacttcgtacaaatgtactatgtcaacgctc 3499704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 20977458 - 20977516
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctc 63  Q
    |||| |||||||| ||||| ||||||||||||||||||||  | ||| |||||||||||    
T  20977458 aaacagagtagtgcagatagtggttgtacacttcgtacaaacgcactatgtcaacgctc 20977516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 22191062 - 22191104
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||    
T  22191062 tgatgaacttgcttctgatgacgtcatcacttcatgagcactt 22191104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 55732017 - 55732059
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||| |||| |||||||| ||||||||||||||||||||||    
T  55732017 tgatgaccttgcttctgatggcatcatcacttcaggagcactt 55732059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 286
Target Start/End: Original strand, 6517709 - 6517750
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcact 286  Q
    ||||||||||| |||||||||| ||||||||||| |||||||    
T  6517709 tgatgaacttgcttctgatgacgtcatcacttcaagagcact 6517750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 3105324 - 3105284
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcac 285  Q
    ||||||||||| || ||||||| ||||||||||||||||||    
T  3105324 tgatgaacttgcttttgatgacgtcatcacttcaggagcac 3105284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 19620919 - 19620871
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||| ||||||||||||||| ||  |||||||||| ||||    
T  19620919 acttcaggagcacgtctcttcagatgctttaagcttcctttttgttgat 19620871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 25651214 - 25651154
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || ||||||||||||| ||||||  |||||  ||||||||||||    
T  25651214 aaacagagtagtggaggtagtggttgtacactttgtacaaacgtactacgtcaacgctctt 25651154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 29680385 - 29680337
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||| ||||||||||||||| ||||||  |||||||||| ||||    
T  29680385 acttcaggaacacttctcttcagatacttcaagcttcctttttgttgat 29680337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 40860895 - 40860939
Alignment:
Q  243 tatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||    
T  40860895 tatgatgaactagcttctgatgacgtcatcacttcagaagcactt 40860939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 180; Significance: 4e-97; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 2 - 287
Target Start/End: Original strand, 220242 - 220525
Alignment:
Q  2 cacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcattt 101  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||| |||||||    
T  220242 cacaaactgagtagtggaggtagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaataa-caagcatccaatgc-ttcaaattcattt 220339  T
Q  102 gaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatg 201  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  220340 gaattagccgttgcttcactctcctggtcttctgcaatgcttagacgagattaaaaccaatgaacagcctttgaagctttaagtctctcatctcctgatg 220439  T
Q  202 aacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||||||||||||||  | |||||||||| ||| | ||||||||||| |||||||||| |||| |||||||||||||||    
T  220440 aacttcagcttctggtgatcttcagcttctgatgaggtgcttctgatgaacttgcttctgatgacgtcattacttcaggagcactt 220525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 377667 - 377373
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||       |||||||||||||||||||| | | ||    
T  377667 acacaaactgagtagtggagatagtggttgtacacttggtacaattgtactttgtcaatgctcttcaaagaa-caagcatccaatgccttcaaatcc-tt 377570  T
Q  101 tgaat-tagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctga 199  Q
    | ||| |||||||||||||||||| | | |||||||||||||||||||||||| ||||||| | |||| | ||||||| |||||||||  ||||| ||||    
T  377569 tcaatatagtcgttgcttcactcttccggtcttctgcaatgcttagacgagattaaatccattcaacaacatttgaagttttaagtcttgcatctcctga 377470  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcaga 296  Q
    ||||||  | ||||||||||||||  | |||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  377469 tgaactataacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactactcttcaga 377373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 224
Target Start/End: Complemental strand, 244390 - 244172
Alignment:
Q  3 acaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttg 102  Q
    |||||| ||||||||||| || |||||||||||||||||||||||| |||| ||||||||||||       ||||||||||||| |||||| | | ||||    
T  244390 acaaacagagtagtggaggtagtggttgtacacttcgtacaattgtcctttttcaacgctcttc-aaagaacaagcatccaatgtcttcaaatccttttg 244292  T
Q  103 aattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatga 202  Q
    ||||||| ||||||||||||| ||| |||||||||| ||  || || ||| |||||   ||||||||||||||| ||| || ||||||||||||| ||||    
T  244291 aattagttgttgcttcactcttctggtcttctgcaacgc-caggcgtgattaaatcttttgaacagcctttgaaacttcaattctctcatcttct-atga 244194  T
Q  203 acttcagcttctggtgatcttt 224  Q
     |||||||| ||| ||||||||    
T  244193 tcttcagctcctgatgatcttt 244172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 211405 - 211465
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || | |||||| |||||||||||  ||||| |||||||||||||    
T  211405 aaacagagtagtggaggtagtagttgtatacttcgtacaaacgtactatgtcaacgctctt 211465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 244135 - 244067
Alignment:
Q  228 ttctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcaga 296  Q
    |||||||||| | | | ||||||||||| || ||||||| ||||||||||| ||||||||  |||||||    
T  244135 ttctgatgaggtacttttgatgaacttgcttttgatgacgtcatcacttcatgagcacttgacttcaga 244067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 163; Significance: 5e-87; HSPs: 84)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 22188205 - 22187886
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||       |||||||||||||||||||| |  |||    
T  22188205 acacaaactgagtagtggagatagtggttgtacacttcgtacaattatactttgttaacgctcttcaaagaa-caagcatccaatgccttcaaatctatt 22188107  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||| |||||||||||||     ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||  ||| | |||||    
T  22188106 caaaatagttgttgcttcactctttcagtcttctgcaatacttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatgtcctgat 22188007  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgct 300  Q
    |||||||| ||||||||||||||  | |||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  22188006 gaacttcaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttctcttcagatgct 22187907  T
Q  301 tcaattttcctttttgatgat 321  Q
    ||||  |||||||||| ||||    
T  22187906 tcaagcttcctttttgctgat 22187886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 10009853 - 10009535
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| |||||       |||||||||||||| ||||| | | ||    
T  10009853 acacaaactgagtagtggagatagtggttgtacatttcgtacaattgtactatgtcaacgttcttcaaagaa-caagcatccaatgctttcaaatccttt 10009755  T
Q  101 tgaattagtcgttgcttcactc-tcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctga 199  Q
      || |||| |||||||||||| || || |||| |||||||||| ||||||||  |||||| ||||||||| ||||||||||||||||  ||||| ||||    
T  10009754 caaaatagttgttgcttcactcctcttggtcttttgcaatgcttggacgagattgaatccattgaacagcccttgaagctttaagtcttgcatctcctga 10009655  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgc 299  Q
    |||||||||||||||||||||||||   |||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  10009654 tgaacttcagcttctggtgatctttc--ttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttctcttcagatgc 10009557  T
Q  300 ttcaattttcctttttgatgat 321  Q
    |||||  |||||||||| ||||    
T  10009556 ttcaagcttcctttttgttgat 10009535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 39037745 - 39037511
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||    
T  39037745 acacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaag-caagcatctaatgccttcaacttcatt 39037647  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    |||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  39037646 tgaattagccgttgcttcactttcctaatcttctgcaatgcttagacgagatcaaatccaatgaacaacctttgaagttttaagtctctcatcttctgat 39037547  T
Q  201 gaacttcagcttctggtgatcttttgattctgatga 236  Q
     ||||| | |||| |||||||||  | |||||||||    
T  39037546 caactttaacttccggtgatcttcagcttctgatga 39037511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 23235004 - 23235289
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||        ||||||||||||||||||| ||| ||    
T  23235004 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacactcttcaaagaat-aagcatccaatgccttcaaattcttt 23235102  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||| ||||| |   |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||  |||||  ||||    
T  23235103 caaaatagtcgttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatctcatgat 23235202  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||  ||||||||||||| ||  | |||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||||    
T  23235203 gaactagagcttctggtgattttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 23235289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 22455093 - 22454809
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||    
T  22455093 acacaaactgagtagtggaggtactggttgtacacttcgtacaattgtactttgtcaacgcttttcaaaaag-caagcatccaatgccttcaacttcatt 22454995  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagccttt-gaagctttaagtctctcatcttctga 199  Q
    |||||||   ||||||||||||| ||| |||||||||||| || | || ||| ||||||| |||||| ||||| ||||||||||||||||||||||||||    
T  22454994 tgaattaactgttgcttcactcttctggtcttctgcaatg-ttgggcgtgattaaatccattgaacacccttttgaagctttaagtctctcatcttctga 22454896  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcact 286  Q
     |||||||||||||||||||||||  | |||||||||| ||| | |||||| |||| |||||| ||| | ||||||||| |||||||    
T  22454895 agaacttcagcttctggtgatcttcagcttctgatgaggtgcttctgatgagcttgcttctgacgacgttatcacttcaagagcact 22454809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 30666986 - 30667271
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| | | ||    
T  30666986 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagat-caagcatccaatgccttcaaatccttt 30667084  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||| ||| |   |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||| |||  ||||| |||||    
T  30667085 caaaatagtcgttgcttcattcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaattcttgcatctcctgat 30667184  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||| || |||||| |  ||||  | |||||||||||||| | ||| ||||||| |||||||||| ||||||||||||||||||||    
T  30667185 gaactacaacttctgatattcttcagcttctgatgagatgcttctgacgaacttgcttctgatgacgtcatcacttcaggagcactt 30667271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 18377009 - 18376704
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| | | ||    
T  18377009 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatccaatgccttcaaatccttt 18376911  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||| |||| |||||| |    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||  ||    
T  18376910 caaaatagtagttgattcactattaaaatcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtctctcatcttcaaat 18376811  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgct 300  Q
    |||||||| |||||||||||||| || |||              ||||||||||  |||||||||| ||||||||||||||||| || ||||||||||||    
T  18376810 gaacttcaacttctggtgatcttctgcttc--------------tgatgaacttacttctgatgacgtcatcacttcaggagcatttttcttcagatgct 18376725  T
Q  301 tcaattttcctttttgatgat 321  Q
    ||||  |||||||||| ||||    
T  18376724 tcaagcttcctttttgttgat 18376704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 21537351 - 21537067
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||| |||   | ||    
T  21537351 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaag-caagcatccaatgcctccaaaaccttt 21537253  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||||| ||| |||||||||||| ||| ||||||| ||||||| |||||| |||||||||||||||||||  ||||| |||||    
T  21537252 caaaatagtcgttgcttcactcttctggtcttctgcaatgtttaaacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgat 21537153  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcact 286  Q
    |||||||| ||||| |||||||||   |||||||||| ||| | || ||| |||| |||||||||| |||| ||||||||||||||    
T  21537152 gaacttcatcttctagtgatctttaacttctgatgaggtgcttctggtgagcttgcttctgatgacgtcattacttcaggagcact 21537067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 20568853 - 20568568
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| | | ||    
T  20568853 acacaaactgagtagtggggatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatccaatgccttcaaatccttt 20568755  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || | || ||||||||||||| |   |||||||||||||||||||||||| |||||||  ||||||||||| |||||||||||||  ||||| |||||    
T  20568754 caaaattgttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccatggaacagcctttaaagctttaagtcttgcatctcctgat 20568655  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||| |||||||||||||||||    |||| ||||||||| | ||||||||||| |||  ||||| ||||||| ||| ||||||||    
T  20568654 gaactacagcttctggtgatcttgaacttcttatgagatgcttctgatgaacttgcttcaaatgacgtcatcacctcatgagcactt 20568568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 25829131 - 25829352
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| | | ||    
T  25829131 acacaaaatgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatccaatgccttcaaatccttt 25829229  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||||| |   |||||||||||||||||||||||| ||||||| |||||| ||||||||||| |||||||  ||||| |||||    
T  25829230 caaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacatcctttgaagctctaagtcttgcatctcctgat 25829329  T
Q  201 gaacttcagcttctggtgatctt 223  Q
    |||||| ||||||||||||||||    
T  25829330 gaactttagcttctggtgatctt 25829352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 25189395 - 25189629
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||| |||||||||||| || |||||||||| |||||||||||||||||||||||||||||||       |||| ||||||||||||||||||||||    
T  25189395 acacaaattgagtagtggaggtagtggttgtacatttcgtacaattgtactttgtcaacgctcttcaaaaag-caagaatccaatgccttcaacttcatt 25189493  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    |||||||||| |||||||||||||||| ||||||||||||| |||  | ||| ||||||| |||||| ||||||||||||||||||||||||||||| ||    
T  25189494 tgaattagtcattgcttcactctcctggtcttctgcaatgc-taggtgtgattaaatccattgaacaacctttgaagctttaagtctctcatcttctaat 25189592  T
Q  201 gaac-ttcagcttctggtgatcttttgattctgatga 236  Q
     ||| || |||||| |||||||||  | |||||||||    
T  25189593 aaacttttagcttcaggtgatcttcagcttctgatga 25189629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 23595670 - 23595371
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||| |||| || ||||| ||||||||||||||||||||||||||||||||  ||       |||| ||||||||||||||| ||||||    
T  23595670 acacaaactgagtagaggaggtagtggttctacacttcgtacaattgtactttgtcaacgct--tcagagaa-caagaatccaatgccttcaaattcatt 23595574  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    ||||||||||||||||||||||| ||| ||||||||||||| |||  | ||| ||||||  |||||| ||||||||||||||| ||| ||||||||||||    
T  23595573 tgaattagtcgttgcttcactcttctggtcttctgcaatgc-taggtgtgattaaatcctttgaacaacctttgaagctttaattctttcatcttctgat 23595475  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgct 300  Q
    || |||||||||||||||| |  ||| |||||||||| |||               |||||||||| |||||||||||||||||||| ||||||||||||    
T  23595474 gatcttcagcttctggtgaac--ttgcttctgatgaggtgc---------------ttctgatgacgtcatcacttcaggagcacttttcttcagatgct 23595392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 13964081 - 13963859
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||| ||    
T  13964081 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatccaatgccttcaaattcttt 13963983  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || ||||||||||||||||||     |||||| ||||||||||||||||| ||||||| |||||| ||||||||||||||| |||  ||||| |||||    
T  13963982 caaaatagtcgttgcttcactctttcagtcttctacaatgcttagacgagattaaatccattgaacaacctttgaagctttaaatcttgcatctactgat 13963883  T
Q  201 gaacttcagcttctggtgatcttt 224  Q
    |||||  ||||||| |||||||||    
T  13963882 gaactagagcttctagtgatcttt 13963859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 19540413 - 19540634
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||        |||||||||||| |||||||   | ||    
T  19540413 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctctt-taaagaacaagcatccaataccttcaaaaccttt 19540511  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
     ||| ||| |||||||||||||||||  |||||||||||||||||| ||||| ||||||| |||||| | |||||||||||||||||  |||||  ||||    
T  19540512 cgaaatagccgttgcttcactctcctagtcttctgcaatgcttagatgagattaaatccattgaacaacatttgaagctttaagtcttgcatctcatgat 19540611  T
Q  201 gaacttcagcttctggtgatctt 223  Q
    |||||||||||||||||||||||    
T  19540612 gaacttcagcttctggtgatctt 19540634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 24850769 - 24850483
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||| |||||||||||||  || |||||||||| |||||||| ||||||||||||||||||||||       |||||||||||||| || || | | ||    
T  24850769 acacacactgagtagtggatgtagtggttgtacatttcgtacacttgtactttgtcaacgctcttcaaagaa-caagcatccaatgctttgaaatccttt 24850671  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagccttt-gaagctttaagtctctcatcttctga 199  Q
      || || ||||||||||||||| ||| ||||| ||||||| |||||||||| ||||||| |||||| ||||| ||||||||||||||  ||||| ||||    
T  24850670 caaaatattcgttgcttcactcttctggtcttcagcaatgcgtagacgagattaaatccattgaacaaccttttgaagctttaagtcttgcatctcctga 24850571  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    || |||||||| ||||||||||||| | |||||||||| ||| | ||||||||||| |||||| ||| |||| |||||||||||||||    
T  24850570 tgtacttcagcatctggtgatctttagcttctgatgaggtgcttctgatgaacttgcttctgacgacgtcattacttcaggagcactt 24850483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 3 - 287
Target Start/End: Complemental strand, 9015469 - 9015189
Alignment:
Q  3 acaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttg 102  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||        ||||||||||||| ||||| | | ||      
T  9015469 acaaactgagtagtggagatagtggttgtacac--cgtacaattgtactttgtcaacgctcttcaaagaat-aagcatccaatgctttcaaatcctttca 9015373  T
Q  103 aattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatga 202  Q
    || |||| |||| |||||||| |   ||||||||||||||||||| |||| ||||||| |||||| |||||||||||||||||||  ||||| |||||||    
T  9015372 aaatagttgttgtttcactcttccagtcttctgcaatgcttagacaagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatga 9015273  T
Q  203 acttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||| || |||||| |||||| || |||||||||| ||  | ||||||||||| |||||||||| |||||||||||||| |||||    
T  9015272 actttagtttctgg-gatcttctgcttctgatgagttgtttctgatgaacttgcttctgatgacgtcatcacttcaggatcactt 9015189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 24377098 - 24377403
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||       ||||||||||||||  ||||   | ||    
T  24377098 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaa-caagcatccaatgctctcaaaaccttt 24377196  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagccttt-gaagctttaagtctctcatcttctga 199  Q
      || |||||||||||||||||| ||| |||||||||||||| || || ||| ||||||| |||||| ||||| ||||||||||||||  |||||  |||    
T  24377197 caaaatagtcgttgcttcactcttctggtcttctgcaatgct-aggcgtgattaaatccattgaacaaccttttgaagctttaagtcttgcatctcttga 24377295  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgc 299  Q
    ||||||||||||||||||||||||| | |||              ||||||||||  |||||||||| ||||||||||||||||||||||||||||||||    
T  24377296 tgaacttcagcttctggtgatctttagcttc--------------tgatgaactttcttctgatgacgtcatcacttcaggagcacttctcttcagatgc 24377381  T
Q  300 ttcaattttcctttttgatgat 321  Q
    ||| |  |||||||||| ||||    
T  24377382 ttctagcttcctttttgttgat 24377403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 25037362 - 25037098
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||       ||| |||||||||| ||||| | | ||    
T  25037362 acacaaactgagtagtggagatagtggttgtacacttcgaacaattgtactttgtcaacgcttttcaaagaa-caaacatccaatgctttcaaatccttt 25037264  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      ||||||||||| | ||||||| |   ||||||||||||||| ||| ||||  |||||| |||||| |||||||||||||||||||  ||||| |||||    
T  25037263 caaattagtcgttacatcactcttccagtcttctgcaatgcttcgacaagattgaatccattgaacaacctttgaagctttaagtcttgcatctcctgat 25037164  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgac 266  Q
    ||||| || ||||||||||||||  | |||||||||||||| | ||||||||||| ||||||||||    
T  25037163 gaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgac 25037098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 25041469 - 25041205
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||       ||| |||||||||| ||||| | | ||    
T  25041469 acacaaactgagtagtggagatagtggttgtacacttcgaacaattgtactttgtcaacgcttttcaaagaa-caaacatccaatgctttcaaatccttt 25041371  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      ||||||||||| | ||||||| |   ||||||||||||||| ||| ||||  |||||| |||||| |||||||||||||||||||  ||||| |||||    
T  25041370 caaattagtcgttacatcactcttccagtcttctgcaatgcttcgacaagattgaatccattgaacaacctttgaagctttaagtcttgcatctcctgat 25041271  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgac 266  Q
    ||||| || ||||||||||||||  | |||||||||||||| | ||||||||||| ||||||||||    
T  25041270 gaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgac 25041205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 10 - 321
Target Start/End: Original strand, 38781405 - 38781713
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    ||||||||||  || |||||||||||||||||||||||||||||||||||||||||        ||| ||| |||||||||||| | | ||  || ||||    
T  38781405 gagtagtggatgtagtggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaatcattcaatgccttcaaatcctttcaaaatagt 38781503  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
     ||||||||||| | |   |||||| || || ||||||||||| ||||| | |||||| |||||||||||||||||||  |||| ||||||||    ||     
T  38781504 tgttgcttcacttttccagtcttctacattgtttagacgagattaaatcaattgaacaacctttgaagctttaagtcttgcatcctctgatgaga--cat 38781601  T
Q  210 cttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttc 309  Q
    ||||||||||||||  | |||||||||||||| | ||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||  |||    
T  38781602 cttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcgcttctcttcagatgcttcaagcttc 38781701  T
Q  310 ctttttgatgat 321  Q
    ||||||| ||||    
T  38781702 ctttttgttgat 38781713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 22317594 - 22317877
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    ||||||| |||||||| || |||||||| ||||||||||||||||||||||||||||||||        ||||||||||||||||| || | | ||  ||    
T  22317594 aaactgaatagtggaggtagtggttgtatacttcgtacaattgtactttgtcaacgctctt-tgaagaacaagcatccaatgcctttaaatcctttcaaa 22317692  T
Q  105 t-tagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaa 203  Q
      |||||||||||||||||| ||  |||| ||||||||||||| ||||| |||||||||||| |||||||||||||||||||||  |||||  |||||||    
T  22317693 aatagtcgttgcttcactcttctagtcttatgcaatgcttagatgagattaaatccaatgaaaagcctttgaagctttaagtcttgcatctcttgatgaa 22317792  T
Q  204 cttcagcttctggtgatcttttgattctgatg-agatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
     |  ||||||||||||| ||  | |||||||| |  ||| ||||||||||||| || ||||||| ||| ||||||||||||||||    
T  22317793 atagagcttctggtgattttcagcttctgatgtacttgcttatgatgaacttgcttatgatgacgtcaccacttcaggagcactt 22317877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 30621213 - 30621431
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||       ||| |||||||||||||||| | | ||    
T  30621213 acacaaactgagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgctcttc-aaagatcaaacatccaatgccttcaaatccttt 30621311  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||| ||||||||||| |   |||||||||||||||| ||||||| ||||||| |||||| |||||||| |||||| |||  ||||| |||||    
T  30621312 caaaatagtcgctgcttcactcttccagtcttctgcaatgcttacacgagattaaatccattgaacaacctttgaacctttaattcttgcatctcctgat 30621411  T
Q  201 gaacttcagcttctggtgat 220  Q
    | ||| || ||||| |||||    
T  30621412 gcactacaacttctagtgat 30621431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 30623834 - 30624052
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||       ||| |||||||||||||||| | | ||    
T  30623834 acacaaactgagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgctcttc-aaagatcaaacatccaatgccttcaaatccttt 30623932  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||| ||||||||||| |   |||||||||||||||| ||||||| ||||||| |||||| |||||||| |||||| |||  ||||| |||||    
T  30623933 caaaatagtcgctgcttcactcttccagtcttctgcaatgcttacacgagattaaatccattgaacaacctttgaacctttaattcttgcatctcctgat 30624032  T
Q  201 gaacttcagcttctggtgat 220  Q
    | ||| || ||||| |||||    
T  30624033 gcactacaacttctagtgat 30624052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 40782474 - 40782751
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||       ||| |||||||||| ||||| | | ||    
T  40782474 acacaaactaagtattggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttc-aaagaacaaacatccaatgctttcaaatccttt 40782572  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||||  ||| |||| |||||||||| ||||||||  |||||| ||||     |||  |||| |||||||  ||||| |||||    
T  40782573 caaaatagtcgttgcttcactcctctggtcttttgcaatgcttggacgagattgaatccattgaa----attt--agctctaagtcttgcatctcctgat 40782666  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||| || ||||||||||||||  ||| ||||||||| |||| | || |||||||| |||||||||| ||||||||||||||||||||    
T  40782667 gaaatttagcttctggtgatc--ttgcttctgatgaaatgcttctggtgaacttgcttctgatgacgtcatcacttcaggagcactt 40782751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 41121822 - 41121605
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||| ||||||||||| || |||||||||| |||| |||||||||||||||||| |||||||       |||  ||||||||||||||| | | ||    
T  41121822 acacaaacagagtagtggaggtagtggttgtacatttcgcacaattgtactttgtcaatgctcttcaaagag-caataatccaatgccttcaaatccttt 41121724  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    |||||||||| |||||||||||  |  ||||||||||||||| || || ||| ||||||  |||||||||||||||||||||| |||| || ||||||||    
T  41121723 tgaattagtctttgcttcactcatccaatcttctgcaatgct-aggcgtgattaaatcctttgaacagcctttgaagctttaattctcacagcttctgat 41121625  T
Q  201 gaacttcagcttctggtgat 220  Q
    || |||||||||||||||||    
T  41121624 gatcttcagcttctggtgat 41121605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 282
Target Start/End: Original strand, 22272139 - 22272407
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    ||||||||||||| |||||||||||||| ||||||| | |||| ||||| |||| |        ||||||||||||||||||| | ||||||||||||||    
T  22272139 agtagtggagatagtggttgtacacttcttacaattttcctttttcaactctctccaacgaaaaaagcatccaatgccttcaaatccatttgaattagtc 22272238  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagc 210  Q
     |||||||| ||| |   ||||||||||||  |||||| ||| |||||   |||||| |||||||| ||  || ||||||| |||||||||| |||||||    
T  22272239 attgcttcattcttccagtcttctgcaatg-atagacgtgattaaatcatttgaacaacctttgaaactccaattctctcagcttctgatgatcttcagc 22272337  T
Q  211 ttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggag 282  Q
    |||||||||  | ||| |||||||||| ||  | ||||||||||| |||| ||||| |||||||||||||||    
T  22272338 ttctggtga--tgttgcttctgatgaggtgtttctgatgaacttgtttctaatgacgtcatcacttcaggag 22272407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 24576032 - 24576295
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||| ||||||       ||| || |||||||||| || | | ||    
T  24576032 acacaaactaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaactctcttcaacgaa-caaacaaccaatgcctttaaatccttt 24576130  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatc-aaatccaatgaacagcctttgaagctttaagtctctcatcttctga 199  Q
      || |||| ||||||||||| | |   |||||||||||||||||| |||||  ||||||| |||||| ||||||||||||||||| |  ||||| || |    
T  24576131 caaaatagttgttgcttcacttttccagtcttctgcaatgcttagatgagatttaaatccattgaacaacctttgaagctttaagtattgcatctcctaa 24576230  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgac 266  Q
    ||||||| ||||||||||||||  ||| || |||||| |||| | ||||||||| | ||||||||||    
T  24576231 tgaactttagcttctggtgatc--ttgcttatgatgatatgcttctgatgaactagcttctgatgac 24576295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 129 - 284
Target Start/End: Original strand, 22260530 - 22260683
Alignment:
Q  129 tcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgat 228  Q
    |||||||||||||||||||||||| ||||||| |||||| | ||||| |||||||||||  ||||| ||||||| ||| | ||||||||||||  ||  |    
T  22260530 tcttctgcaatgcttagacgagattaaatccattgaacaacttttgacgctttaagtcttgcatctcctgatgagctttaacttctggtgatc--ttcct 22260627  T
Q  229 tctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagca 284  Q
    ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||    
T  22260628 tctgatgagatgcttttgatgaacttgcttctgatgacgtcatcacttcaggagca 22260683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 28140722 - 28140509
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| || | |||||||| ||||||||||||| ||||||||||||||       |||||||||||||  ||||| | | ||    
T  28140722 acacaaactgagtagtggagatagtgatggtacactttgtacaattgtactatgtcaacgctcttcaaagaa-caagcatccaatgttttcaaatccttt 28140624  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||| ||||||||||||   ||||||| |||||||||| ||||||||  |||||| |||||| ||||||||| |||||||||  ||||| | |||    
T  28140623 caaaatagttgttgcttcactccaatgatcttttgcaatgcttggacgagattgaatccattgaacaacctttgaagttttaagtcttgcatctcccgat 28140524  T
Q  201 gaacttcagcttctg 215  Q
    |||||||||||||||    
T  28140523 gaacttcagcttctg 28140509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 23184407 - 23184114
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||| |||| || ||||| ||||||||||||||||||||||||||||||  ||||         || ||||||||||||||| ||||||    
T  23184407 acacaaactgagtagaggaggtagtggttctacacttcgtacaattgtactttgtcaacg--cttcagagaac--agaatccaatgccttcaaattcatt 23184312  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    ||||||||||| ||||||||||| ||| |||||||| |||| |||  | |||  |||||  |||||| |||||||||| |||| ||| ||||||||||||    
T  23184311 tgaattagtcg-tgcttcactcttctggtcttctgc-atgc-taggtgtgat-taatcctttgaacaacctttgaagc-ttaattct-tcatcttctgat 23184218  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgct 300  Q
    || |||||||||||||||| |  ||| |||||||||| |||               |||||||||| |||||||||||||||||||| ||||||||||||    
T  23184217 gatcttcagcttctggtgaac--ttgcttctgatgaggtgc---------------ttctgatgacgtcatcacttcaggagcacttttcttcagatgct 23184135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 25 - 220
Target Start/End: Complemental strand, 20152114 - 20151921
Alignment:
Q  25 tggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctc 124  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| | | ||  || ||  |||||||||||| |     
T  20152114 tggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaactaaccgttgcttcactttt 20152016  T
Q  125 ctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgat 220  Q
    |   |||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| | |  ||||| ||||||| || ||||||||||||||    
T  20152015 ccagtcttctgcaatgcttagacgagattaaatccattgaacaacttttgaagctttaa-tgttgcatctcctgatgagctgcagcttctggtgat 20151921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 261
Target Start/End: Original strand, 7609067 - 7609216
Alignment:
Q  111 gttgcttcactc-tcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
    |||||||||||| || || |||| || ||||||| ||||||||  |||||| ||||||||| ||||||||||||||||  ||||| ||||||||||| ||    
T  7609067 gttgcttcactcctcttggtcttttgtaatgcttggacgagattgaatccattgaacagcccttgaagctttaagtcttgcatctcctgatgaactttag 7609166  T
Q  210 cttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctg 261  Q
    ||||||||||||  ||| |||||||||||||| | ||||||||||| |||||    
T  7609167 cttctggtgatc--ttgcttctgatgagatgcttctgatgaacttgcttctg 7609216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 6574223 - 6574009
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaa-ttgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttga 103  Q
    |||| ||||||||||| || |||||||||||||||||||| |||||||||||||||||||||        ||| |||||||||||||||| | | ||  |    
T  6574223 aaacagagtagtggaggtagtggttgtacacttcgtacaatttgtactttgtcaacgctctt-tgaagaacaaacatccaatgccttcaaatcctttcaa 6574125  T
Q  104 attagtcgttgcttcactctcctgatcttctgcaatgc-ttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatga 202  Q
    | |||||||||||||||| | |   ||||||||||||| ||||||||||| ||||| | |||||| ||||||||||||||  | |  |||||||||||||    
T  6574124 actagtcgttgcttcacttttccagtcttctgcaatgcattagacgagattaaatcaattgaacaacctttgaagcttta--tgttgcatcttctgatga 6574027  T
Q  203 acttcagcttctggtgat 220  Q
    ||| || ||||| |||||    
T  6574026 actgcaacttctagtgat 6574009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 24779340 - 24779525
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||| ||||||       ||| ||||| |||| ||||| | | ||    
T  24779340 acacaaactgagtagtggagatagtggttatacacttcatacaattgtactatgtcaacactcttc-aaagaacaaacatccgatgctttcaaatccttt 24779438  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtct 187  Q
      || |||||||||||||||||  ||| |||| | |||||||| ||||||||  |||||| |||||| |||||||||||| ||||||    
T  24779439 caaaatagtcgttgcttcactcctctggtctttttcaatgcttggacgagattgaatccattgaacaacctttgaagcttcaagtct 24779525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 44881173 - 44881381
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    |||||||||||||| |||||||||||||||||||||||| |||| ||||| ||| ||        || ||||||||||||||||   ||||||||||||     
T  44881173 gagtagtggagatagtggttgtacacttcgtacaattgtcctttttcaactctc-tccaacaaaaaaacatccaatgccttcaaacccatttgaattagc 44881271  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
     | ||||||| ||| |   ||||||||||||  |||||| ||| || ||   ||||||||||||||||||| || | ||||| |||||||||| ||||||    
T  44881272 tgctgcttcattcttccagtcttctgcaatg-atagacgtgattaagtcatttgaacagcctttgaagcttcaattatctcagcttctgatgatcttcag 44881370  T
Q  210 cttctggtgat 220  Q
    ||| |||||||    
T  44881371 cttttggtgat 44881381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 185
Target Start/End: Complemental strand, 28711797 - 28711618
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||  ||||||| |||||||||||        |||||||||||||||||||| |||||| |||    
T  28711797 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttttcaacgctctt-tgaagaacaagcatccaatgccttcaaattcattcgaa 28711699  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagt 185  Q
     |||||||||||| ||| | |   |||||||||||  |||||| || |  |||||| | |||||| |||||||| ||||||    
T  28711698 atagtcgttgctttacttttccagtcttctgcaatctttagacaaggttgaatccattaaacagcttttgaagccttaagt 28711618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 31800986 - 31800926
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  31800986 aaacagagtagtggagatagtggttgtacacttcgtacaaatgtactttgtcaacgctctt 31800926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 209
Target Start/End: Complemental strand, 26619200 - 26618998
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| |||||||||||||| |||||||||||||||||||||||| |||| |||||| || ||        |||||| |||||||||||| ||| ||||||    
T  26619200 aaacagagtagtggagatagtggttgtacacttcgtacaattgtcctttttcaacgttc-tccaaagaataagcattcaatgccttcaaattcttttgaa 26619102  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||| ||||||||| ||| |   ||||||||||||  ||| || ||| |||||   |||||| |||||||||||| || ||| ||| |||||| ||| |    
T  26619101 atagttgttgcttcattcttccagtcttctgcaatg-ataggcgtgattaaatcatttgaacaacctttgaagcttcaattctttcagcttctgttgatc 26619003  T
Q  205 ttcag 209  Q
    |||||    
T  26619002 ttcag 26618998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 257 - 316
Target Start/End: Original strand, 25189621 - 25189680
Alignment:
Q  257 ttctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttcctttttg 316  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||  ||||||||||    
T  25189621 ttctgatgacatcatcacttcaggagcacttttgttcagatgcttcaagcttcctttttg 25189680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 1587132 - 1587072
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  1587132 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 1587072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 6392634 - 6392779
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||  ||||||||||||  |||||||||||||||||||        |||||||||||||| ||||| | | ||  ||    
T  6392634 aaacagagtagtggaggtagtggttgcgcacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaa 6392733  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgag 150  Q
     |||||||||||||||| | |   ||||||||||| ||||||||||    
T  6392734 atagtcgttgcttcacttttccagtcttctgcaatccttagacgag 6392779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 18430970 - 18430835
Alignment:
Q  75 aagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttg 174  Q
    |||||| |||||||||||| ||| |||||||||| ||||||||||  || ||  |||||||||||| | || || ||| ||| |   |||||| ||||||    
T  18430970 aagcattcaatgccttcaaattcttttgaattagccgttgcttcatgcttctagtcttctgcaatgat-aggcgtgattaaaacatttgaacaacctttg 18430872  T
Q  175 aagctttaagtctctcatcttctgatgaacttcagct 211  Q
    ||||||||| ||| ||| |||||||||| ||||||||    
T  18430871 aagctttaattctttcagcttctgatgatcttcagct 18430835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 223
Target Start/End: Original strand, 19115089 - 19115300
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    |||||||||||||| |||||||||||||||||||||||| |||| ||||| ||| ||        | ||||||| || |||||  | ||| |||||||||    
T  19115089 gagtagtggagatagtggttgtacacttcgtacaattgtcctttttcaacactc-tccaacgaataggcatccactggcttcacatccatctgaattagt 19115187  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
     ||||||||| ||| |   |||||||||||   ||| |||||| |||| |  |||||| |||||||||||| || ||| ||| |||||||||| ||||||    
T  19115188 tgttgcttcattcttccagtcttctgcaat-agtaggcgagattaaattctttgaacaacctttgaagcttcaattctttcagcttctgatgatcttcag 19115286  T
Q  210 cttctggtgatctt 223  Q
    |  ||| |||||||    
T  19115287 cacctgatgatctt 19115300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 28551017 - 28550957
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  28551017 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 28550957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 44840435 - 44840495
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  44840435 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 44840495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 28140513 - 28140454
Alignment:
Q  228 ttctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||||||||| | ||||||||||| || ||||||| ||||||||||||||||||||    
T  28140513 ttctgatgagatgcttctgatgaacttgcttttgatgacgtcatcacttcaggagcactt 28140454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 30557415 - 30557360
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    ||||||||||| || ||||||||||||||||||||  |||||||||||||||||||    
T  30557415 gagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt 30557360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 22776387 - 22776327
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||| |||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  22776387 aaacagagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 22776327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 22781765 - 22781705
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||| |||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  22781765 aaacagagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 22781705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 22802461 - 22802521
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || ||||||||||||||||||||  ||||||||||||| |||||    
T  22802461 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaactctctt 22802521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 31968142 - 31968082
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||| | |||||||||||||    
T  31968142 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctctt 31968082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 35744099 - 35744039
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    ||||||||||||||||||| | |||||||| |||||||||  ||||| |||||||||||||    
T  35744099 aaactgagtagtggagatagtagttgtacatttcgtacaaacgtactatgtcaacgctctt 35744039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 14581525 - 14581576
Alignment:
Q  14 agtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  14581525 agtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 14581576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 33074227 - 33074282
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacg 60  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||| | ||||||||    
T  33074227 aaacagagtagtggagatagtggttgtacacttcgtacaatcgtattatgtcaacg 33074282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 3277037 - 3277091
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    ||||||||||||| ||||||||||||||||||||  ||||| | |||||||||||    
T  3277037 agtagtggagatagtggttgtacacttcgtacaaacgtactatatcaacgctctt 3277091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 28701322 - 28701272
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgc 61  Q
    |||||||||| |||||||||||||||||||||||   ||||||||||||||    
T  28701322 agtagtggaggtaatggttgtacacttcgtacaaacttactttgtcaacgc 28701272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 33074465 - 33074507
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  33074465 tgatgaacttgcttctgatgacgtcatcacttcaggagcactt 33074507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 321
Target Start/End: Original strand, 40782757 - 40782803
Alignment:
Q  275 ttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||    
T  40782757 ttcaggagcacttctcttcagatgcttcaagcttcctttttgttgat 40782803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 41121584 - 41121538
Alignment:
Q  258 tctgatgacatcatcacttcaggagcacttctcttcagatgcttcaa 304  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||||    
T  41121584 tctgatgacgtcatcacttcaggagcacctttcttcagatgcttcaa 41121538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 13963848 - 13963777
Alignment:
Q  249 gaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||| |||||||||| | |||||||||||||||||||| |||||||| |||||   ||||||||| ||||    
T  13963848 gaacttgcttctgatgacgt-atcacttcaggagcacttcttttcagatgtttcaaacgtcctttttgttgat 13963777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 39037472 - 39037424
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||| ||||||||||||||||||||||||  |||||||||| ||||    
T  39037472 acttcagtagcacttctcttcagatgcttcaagcttcctttttgttgat 39037424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 40332088 - 40332148
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||| ||||| || ||||||||||||||||||||  ||||| |||||||||||||    
T  40332088 aaacagagtaatggagttagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 40332148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 45087263 - 45087223
Alignment:
Q  25 tggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  45087263 tggttgtacacttcgtacaaacgtactttgtcaacgctctt 45087223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 22785749 - 22785694
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||||||||||||| ||||| ||||||| ||||||  ||||| |||||||||||||    
T  22785749 gagtagtggagatagtggttatacactttgtacaaaagtactatgtcaacgctctt 22785694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 34322030 - 34321975
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||||||| ||||| |||||||||||||| |||||  ||||| |||||||||||||    
T  34322030 gagtagtgaagatagtggttgtacacttcatacaaacgtactatgtcaacgctctt 34321975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 321
Target Start/End: Original strand, 38631240 - 38631287
Alignment:
Q  274 cttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||||||||||||||  ||| |||||| ||||    
T  38631240 cttcaggagcacttctcttcagatgcttcaagcttcatttttgttgat 38631287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 1586918 - 1586876
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||    
T  1586918 tgatgaacttgtttctgatgacgtcatcacttcatgagcactt 1586876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 22776191 - 22776149
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||| ||||| ||||||||||||||||||||    
T  22776191 tgatgaacttgcttctaatgacgtcatcacttcaggagcactt 22776149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 22781569 - 22781527
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||| ||||| ||||||||||||||||||||    
T  22781569 tgatgaacttgcttctaatgacgtcatcacttcaggagcactt 22781527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 22802697 - 22802739
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||| |||| |||||||||| ||||||||||||||||||||    
T  22802697 tgatgaccttgcttctgatgacgtcatcacttcaggagcactt 22802739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 28550804 - 28550762
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| || ||||||| ||||||||||||||||||||    
T  28550804 tgatgaacttgcttatgatgacgtcatcacttcaggagcactt 28550762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 30557165 - 30557123
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| |||||| |||||||||||||    
T  30557165 tgatgaacttgcttctgatgacgtcatcaattcaggagcactt 30557123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 321
Target Start/End: Original strand, 30667280 - 30667322
Alignment:
Q  279 ggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||||||||||||||  |||||||||| ||||    
T  30667280 ggagcacttctcttcagatgcttcaagcttcctttttgttgat 30667322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 35743863 - 35743821
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||||||||||||| | ||||||||    
T  35743863 tgatgaacttgcttctgatgacatcatcactttaagagcactt 35743821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 40332302 - 40332344
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| || ||||||| ||||||||||||||||||||    
T  40332302 tgatgaacttgcttatgatgacgtcatcacttcaggagcactt 40332344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 44840645 - 44840687
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||| |||| |||||||||| ||||||||||||||||||||    
T  44840645 tgatgatcttgcttctgatgacgtcatcacttcaggagcactt 44840687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 3277245 - 3277294
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcacttctcttca 294  Q
    ||||||||||| |||| ||||| ||||||||||||||||| || ||||||    
T  3277245 tgatgaacttgcttctaatgacgtcatcacttcaggagcagttttcttca 3277294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 287
Target Start/End: Original strand, 6392864 - 6392901
Alignment:
Q  250 aacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  6392864 aacttgcttctgatgacgtcatcacttcaggagcactt 6392901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 22258198 - 22258231
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  22258198 acacaaactgagtagtggagatagtggttgtaca 22258231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 23392747 - 23392707
Alignment:
Q  25 tggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    ||||||||||||||||||| |||||||  ||||||||||||    
T  23392747 tggttgtacacttcgtacagttgtactaggtcaacgctctt 23392707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 31328065 - 31328005
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || |||||||||||||||| | |   ||||||||||||||||||    
T  31328065 aaacagagtagtggaggtagtggttgtacacttcgttcgaacatactttgtcaacgctctt 31328005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 31334786 - 31334726
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || |||||||||||||||| | |   ||||||||||||||||||    
T  31334786 aaacagagtagtggaggtagtggttgtacacttcgttcgaacatactttgtcaacgctctt 31334726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 31967927 - 31967887
Alignment:
Q  247 atgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||| |||||||||  ||||||||||||||||||||    
T  31967927 atgaacttgcttctgatgatgtcatcacttcaggagcactt 31967887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 34321784 - 34321740
Alignment:
Q  243 tatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||| || | |||||||||| ||||||||||||||||||||    
T  34321784 tatgatgatctcgcttctgatgacgtcatcacttcaggagcactt 34321740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 152; Significance: 2e-80; HSPs: 95)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 16316716 - 16316399
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||       ||||||||||||| |||||| | | ||    
T  16316716 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatttcaacgctcttcaaagaa-caagcatccaatggcttcaaatccttt 16316618  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||  ||||||||||||| ||| ||||||||||| |||||||| ||| ||||||| |||||| |||||||||||||||||||  ||||  |||||    
T  16316617 caaaatagctgttgcttcactcttctggtcttctgcaattcttagacgtgattaaatccattgaacaacctttgaagctttaagtcttgcatcccctgat 16316518  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgct 300  Q
    |||||||| ||||||||||||  ||| |||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||    
T  16316517 gaacttcaacttctggtgatc--ttgcttctgatgagatgcttctgatgaacttgcttctgatgacatcatcacttcaggagcacttctctttagacgct 16316420  T
Q  301 tcaattttcctttttgatgat 321  Q
    ||||  |||||||||| ||||    
T  16316419 tcaagcttcctttttgttgat 16316399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 41842432 - 41842212
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||| || || ||||||||||||||||||||||||||| ||||||||| |||        |||| |||||||| |||||||||||||    
T  41842432 acacaaactgagtagtgcaggtagtggttgtacacttcgtacaattgtactctgtcaacgcactt-taaaaaacaagtatccaatgtcttcaacttcatt 41842334  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||    
T  41842333 tgaattagtcgttgcttcactctcctgatcttatgcagtgcttagacgagatcaaatcaaatgaacaacctttgaagc-ttaagtctctcatcttctgat 41842235  T
Q  201 gaacttcagcttctggtgatctt 223  Q
    |||||||||||||||||||||||    
T  41842234 gaacttcagcttctggtgatctt 41842212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 39284723 - 39284419
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||       ||| |||||||||||||||| ||||||    
T  39284723 acacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caaacatccaatgccttcaaattcatt 39284625  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    |||||||||||||| |||||||| ||| ||||| |||||||| || || ||| ||||||  |||||||||||||||||||| | ||||||||||||||||    
T  39284624 tgaattagtcgttgtttcactcttctggtcttcagcaatgct-aggcgtgattaaatcctttgaacagcctttgaagctttgattctctcatcttctgat 39284526  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgct 300  Q
    || ||||||||||||||||||||  | |||              ||||||||||| |||||||||| ||||||||||||||| |||| ||||||||  ||    
T  39284525 gatcttcagcttctggtgatcttcagcttc--------------tgatgaacttgcttctgatgacgtcatcacttcaggagtacttttcttcagacact 39284440  T
Q  301 tcaattttcctttttgatgat 321  Q
    ||||  |||||||||| ||||    
T  39284439 tcaagcttcctttttgttgat 39284419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 21695400 - 21695634
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| |   ||    
T  21695400 acacaaactgagtagttgaggtactggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatccaatgccttcaaatcattt 21695498  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    |||| |||||||||||||||||| ||| |||||||||||||||||||||||| ||||||| |||||| | |||||||||||||||||  |||||  ||||    
T  21695499 tgaaatagtcgttgcttcactcttctggtcttctgcaatgcttagacgagattaaatccattgaacaacttttgaagctttaagtcttgcatctcttgat 21695598  T
Q  201 gaacttcagcttctggtgatcttttgattctgatga 236  Q
    |||||||||||||||||||||||  | |||||||||    
T  21695599 gaacttcagcttctggtgatcttcagcttctgatga 21695634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 15088519 - 15088824
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||| |||||| | | ||    
T  15088519 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctt-aaaagaacaagcatccaatgtcttcaaatccttt 15088617  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || ||||||||||||||||||     |||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||  ||||| |||||    
T  15088618 caaaatagtcgttgcttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttacgtcttgcatctcctgat 15088717  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgct 300  Q
    ||| |  ||||||||||||||||                || ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  15088718 gaattagagcttctggtgatctt--------------cagcttatgatgaacttgcttctgatgacgtcatcacttcaggagcacttctcttcagatgct 15088803  T
Q  301 tcaattttcctttttgatgat 321  Q
    ||||  |||||||||| ||||    
T  15088804 tcaagcttcctttttgttgat 15088824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 4 - 287
Target Start/End: Complemental strand, 10883329 - 10883047
Alignment:
Q  4 caaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttga 103  Q
    ||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||       || ||||||||||||||||| | | ||  |    
T  10883329 caaactgagtagtggaggtagtgattgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caggcatccaatgccttcaaatcctttcaa 10883231  T
Q  104 attagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaa 203  Q
    | |||||||||||||||||| |   ||||||| |||| ||||||||||| ||||||| |||||| |||||||| ||||||||||  ||||| ||||||||    
T  10883230 aatagtcgttgcttcactcttccagtcttctgaaatgattagacgagattaaatccattgaacaacctttgaaactttaagtcttgcatctcctgatgaa 10883131  T
Q  204 cttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    || |||||||||||||||||  | |||||||| ||||| | ||||||||||| |||||| ||| || |||||||||||||||||    
T  10883130 ctacagcttctggtgatcttcagcttctgatgggatgcttctgatgaacttgcttctgacgacgtcgtcacttcaggagcactt 10883047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 11792906 - 11793191
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||| ||||| ||||| | | ||    
T  11792906 acacaaactaagtggtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatcaaatgctttcaaatgcttt 11793004  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || ||||||||||||||||||  || ||||  |||||||||||||||||| || |||| |||||| ||||| |||||||||||||  ||||| |||||    
T  11793005 caaaatagtcgttgcttcactcttatggtctttcgcaatgcttagacgagattaagtccattgaacaacctttaaagctttaagtcttgcatctcctgat 11793104  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttg-attctgatgacatcatcacttcaggagcact 286  Q
    |||||||||||||||||||||||| | |||||||||||||  |||||||||||||  || | ||||| ||||||||| |||||||||    
T  11793105 gaacttcagcttctggtgatctttagcttctgatgagatgtttatgatgaacttgctttttaatgacgtcatcactttaggagcact 11793191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 10 - 287
Target Start/End: Original strand, 15467924 - 15468200
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||        |||||||||||||||||||| | | ||| || ||||    
T  15467924 gagtagtggaggtaatggttgtacacctcgtacaattgtactttgtcaacgctctt-tgaagaacaagcatccaatgccttcaaatccttttaaaatagt 15468022  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
    ||||| |||||||| |   ||||||||| ||| |||||||||| ||||| | |||||| |||||||||||||||||||  ||||| ||||||||||  ||    
T  15468023 cgttgattcactcttccagtcttctgcattgcctagacgagattaaatctattgaacaccctttgaagctttaagtcttgcatctcctgatgaactagag 15468122  T
Q  210 cttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||| |||||  |  ||||||||||||| ||||||||||||| |||||||||| ||||||||||| ||||||||    
T  15468123 cttctggtaatcttcagcatctgatgagatgcatatgatgaacttgcttctgatgacgtcatcacttcaagagcactt 15468200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 13018664 - 13018431
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||||    
T  13018664 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaatcca-gcatccaatgccttcaacttcatt 13018566  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcc-tttgaagctttaagtctctcatcttctga 199  Q
    | || |||||||||||||||||||||  ||||||||||| | | | || ||| ||||||| ||||||||| ||||||||||||||  |||| |||||  |    
T  13018565 taaaatagtcgttgcttcactctcctagtcttctgcaatac-tgggcgtgattaaatccattgaacagccttttgaagctttaag--tctcgtcttcata 13018469  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatgag 237  Q
    |||||||||||||||||||||||| || ||||||||||    
T  13018468 tgaacttcagcttctggtgatcttctgcttctgatgag 13018431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 13880103 - 13880388
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||        ||||||| ||||||||||| | | ||    
T  13880103 acacaaagtgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaat-aagcatctaatgccttcaaatccttt 13880201  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||||  |   |||||||||||||||||||||||| || |||| ||||||||||||||||||||| ||||  ||  | |||||    
T  13880202 caaaatagtcgttgcttcactcgtcgagtcttctgcaatgcttagacgagattaagtccattgaacagcctttgaagctttatgtcttgcaattcctgat 13880301  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||  |||||||  |||||||  | |||||||||||||| | ||||||||||| |||||||||  ||||||||||||||||||||    
T  13880302 gaactagagcttctcatgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgatgtcatcacttcaggagcactt 13880388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 28409042 - 28409322
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||        ||| |||||||||||||||| | | ||  ||    
T  28409042 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaaacatccaatgccttcaaatcctttcaaa 28409140  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     || | ||||||||||||| ||  |||||||||||| ||||||||||| ||||||| |||||| |||||||||| ||| ||||  |||||  ||||||||    
T  28409141 ataattgttgcttcactcttctagtcttctgcaatgtttagacgagattaaatccattgaacaacctttgaagccttatgtcttgcatctcttgatgaac 28409240  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    || |||||||||||| || ||| |||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||||    
T  28409241 tttagcttctggtga-ctgttgcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 28409322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 12366907 - 12366624
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||| ||||| |||||||| || |||||||| |||||||||||||||||| ||||||||||||||       ||  |||||||||| ||||| | | ||    
T  12366907 acacagactgattagtggaggtagtggttgtatacttcgtacaattgtactatgtcaacgctcttcaaagaa-cagacatccaatgctttcaaatccttt 12366809  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||| |||||||||||||||   |||||||||||||||| ||||||| ||||||| ||||||||| |||||||||||||| |  || || |||||    
T  12366808 caaaatagttgttgcttcactctcccagtcttctgcaatgcttaaacgagattaaatccattgaacagcccttgaagctttaagttttgcacctcctgat 12366709  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||||||||||| |  ||| |||||||||||||| | |||||||||||||||||||||  ||||||||||||||||||||    
T  12366708 gaacttcagcttctggtgacc--ttgcttctgatgagatgcttttgatgaacttgattctgatgatgtcatcacttcaggagcactt 12366624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 5 - 287
Target Start/End: Complemental strand, 22578176 - 22577897
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||        ||| ||| |||||||||||| | | ||  ||    
T  22578176 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt-ttaagaacaatcattcaatgccttcaaatcctttcaaa 22578078  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||| |||||||||||||     |||||||||||||||| ||||||| ||||| | |||||| |||||||||||||||||||  ||||| |||||||||    
T  22578077 atagttgttgcttcactcttacagtcttctgcaatgcttaaacgagattaaatctattgaacaccctttgaagctttaagtcttgcatctcctgatgaac 22577978  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||||||||||||  |||  ||||||||||||| | |||||| |||| |||| ||||| ||||||||||||||||||||    
T  22577977 ttcagcttctggtgatc--ttgcctctgatgagatgcttctgatgaccttgcttctaatgacgtcatcacttcaggagcactt 22577897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 266
Target Start/End: Complemental strand, 21283528 - 21283270
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| | | ||  ||    
T  21283528 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaataacaagcatccaatgccttcaaatcctttcaaa 21283430  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     | | |||||||| ||||| |   |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||| | |||||||||    
T  21283429 atggacgttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatatcctgatgaac 21283330  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgac 266  Q
    |||| ||||||||||||  ||| |||||||||||| | | ||||||||||||||||||||||    
T  21283329 ttcaacttctggtgatc--ttgcttctgatgagattcttctgatgaacttgattctgatgac 21283270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 11319404 - 11319689
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||       || ||||||||||| ||||| | | ||    
T  11319404 acacaaactgagtagtggagatagtggttgtacacttcgtgcaattgtaatttgtcaacgctcttcaaaaaa-cacgcatccaatgcattcaaatccttt 11319502  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||| ||| |||||||||     ||||||||||||||||||| |||| ||||||| |||||| |||||||||||| ||||||  |||||  ||||    
T  11319503 caaaatagttgttacttcactctttcagtcttctgcaatgcttagacaagattaaatccattgaacatcctttgaagcttgaagtcttgcatctcttgat 11319602  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    || || || ||||||||||||||  | |||||||||||||| | ||||||||||| || | ||||| ||||||||||||||||||||    
T  11319603 gacctacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttttaatgacgtcatcacttcaggagcactt 11319689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 13302809 - 13303030
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||       |||||||| ||||||||||| | | ||    
T  13302809 acacaaactgagtagtggtgatagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaa-caagcatctaatgccttcaaatccttt 13302907  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||||| ||  |||||| |||||||||||||| || ||||||| |||||| |||||||||||||||||||  ||||| || ||    
T  13302908 caaaatagtcgttgcttcactcttctagtcttctacaatgcttagacgatattaaatccattgaacaacctttgaagctttaagtcttgcatctcctaat 13303007  T
Q  201 gaacttcagcttctggtgatctt 223  Q
    ||||| |||||||||||||||||    
T  13303008 gaactacagcttctggtgatctt 13303030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 5 - 236
Target Start/End: Original strand, 44467067 - 44467298
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||||||||||||||||| |||||        |||||||||||||||||||| | | ||  ||    
T  44467067 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacactctt-taaagaacaagcatccaatgccttcaaatcctttcaaa 44467165  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcc-tttgaagctttaagtctctcatcttctgatgaa 203  Q
     |||||||||||||||||| ||  |||||||||||||||||||||||| ||||||| |||||| || |||||||||||||||||  ||||| ||||||||    
T  44467166 atagtcgttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattgaacaaccttttgaagctttaagtcttgcatctcctgatgaa 44467265  T
Q  204 cttcagcttctggtgatcttttgattctgatga 236  Q
    ||||||||| ||||||||||  | |||||||||    
T  44467266 cttcagcttttggtgatcttcagcttctgatga 44467298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 13260774 - 13260499
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||| | |||| |||||||       |||||||||||||| ||||      |     
T  13260774 acacaaactgggtagtggagatagtggttgtacacttcgtacaattgtactatctcaatgctcttccaagaa-caagcatccaatgctttca------ta 13260682  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
     |||| ||| ||||||| ||||  ||| ||||| ||||||||| |||||||| ||||||| | ||||| ||||| ||||||||||||  ||||| |||||    
T  13260681 agaat-agttgttgctttactcctctggtcttccgcaatgcttggacgagattaaatccatt-aacagtctttggagctttaagtcttgcatctcctgat 13260584  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||| ||||||||||||||||  | |||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  13260583 gaactttagcttctggtgatctt--gcttctaatgagatgcttatgatgaacttgcttctgatgacatcatcacttcaggagcactt 13260499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 2913767 - 2913546
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| | | ||    
T  2913767 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttc-aaagaacaagcatccaatgccttcaaatccttt 2913669  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || ||||||||||| |||| | ||  ||||||||| || ||||| ||||| |||| || |||||||||||||||| |||||||||  ||||| |||||    
T  2913668 caaaatagtcgttgctccacttttctagtcttctgcattgtttagatgagattaaattcattgaacagcctttgaagatttaagtcttgcatctcctgat 2913569  T
Q  201 gaacttcagcttctggtgatctt 223  Q
    ||||| ||| |||||||||||||    
T  2913568 gaactacagtttctggtgatctt 2913546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 21692286 - 21692504
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||       |||||||||||||||||||| | | ||    
T  21692286 acacaaactgagtagtggaggtagtggttgtacacttcatacaattgtactttgtcaacgctcttcaaagaa-caagcatccaatgccttcaaatccttt 21692384  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      ||  ||||||||||||||||| ||| |||||||||||||||||| ||||| |||  || |||| | | |||||||||||||||||  ||||| || ||    
T  21692385 caaaacagtcgttgcttcactcttctggtcttctgcaatgcttagaagagattaaaatcattgaataacttttgaagctttaagtcttgcatctcctaat 21692484  T
Q  201 gaacttcagcttctggtgat 220  Q
    ||||||||||||||| ||||    
T  21692485 gaacttcagcttctgatgat 21692504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 106 - 287
Target Start/End: Original strand, 13692445 - 13692624
Alignment:
Q  106 tagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaact 205  Q
    |||| ||||||||||||| |   |||||||||||||||| ||||||| ||||||| |||||| |||||||||||||||||||  ||||||||||||| ||    
T  13692445 tagttgttgcttcactcttccagtcttctgcaatgcttatacgagattaaatccattgaacaacctttgaagctttaagtcttacatcttctgatgagct 13692544  T
Q  206 tcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    | ||||||||||||||  ||| |||||| ||||||| | ||||||||||| |||||||||  ||||||||||||||||||||    
T  13692545 ttagcttctggtgatc--ttgcttctgaagagatgcttctgatgaacttgcttctgatgatgtcatcacttcaggagcactt 13692624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 19237202 - 19236969
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||| ||||||||||| || ||||||||||||||||| ||||||| |||||||||||||||        |||||||||||||||||||| | | ||    
T  19237202 acacaaacagagtagtggaggtagtggttgtacacttcgtataattgtagtttgtcaacgctctt-tgaagaacaagcatccaatgccttcaaatccttt 19237104  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || ||| |||||||||||||| ||| |||||||||||||| ||||||||| ||||||  |||||||||||||||||||||| |||||||||||||| |    
T  19237103 caaagtagccgttgcttcactcttctggtcttctgcaatgct-agacgagattaaatcctttgaacagcctttgaagctttaactctctcatcttctggt 19237005  T
Q  201 gaacttcagcttctggtgatcttttgattctgatga 236  Q
     | |||||||| ||  |||||||  | |||||||||    
T  19237004 aatcttcagctcctaatgatcttcagcttctgatga 19236969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 13730834 - 13730652
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||| |   ||    
T  13730834 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttc-aaagaacaagcatccaatgcattcaaatctttt 13730736  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaag 184  Q
      || ||| ||||||||||||||  |  |||| ||||||||||||||||||| ||||||| |||||| ||||||||||||||||    
T  13730735 caaaatagccgttgcttcactcttttagtcttatgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaag 13730652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 13138050 - 13137833
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| |   ||  ||    
T  13138050 aaactgagtaatggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttc-aaagaacaagcatccaatgccttcaaatcttttcaaa 13137952  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||| |||||||||||||     |||||||||||||||||||||||| ||||||| |||  | |||||||||||||||||||  ||||| || ||||||    
T  13137951 atagttgttgcttcactctttcagtcttctgcaatgcttagacgagattaaatccattgattaacctttgaagctttaagtcttgcatctccttatgaac 13137852  T
Q  205 ttcagcttctggtgatctt 223  Q
    |  ||||||||||||||||    
T  13137851 tagagcttctggtgatctt 13137833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 13648728 - 13648949
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||       ||||||||||||| ||| || | | ||    
T  13648728 acacaaattgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagat-caagcatccaatgtctttaaatccttt 13648826  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || ||| ||||||||||||||     |||||||||||||||||||| ||| ||||||| |||||| | |||||||||||||||||| ||||| |||||    
T  13648827 caaaatagccgttgcttcactctttcagtcttctgcaatgcttagacgcgattaaatccattgaacatcttttgaagctttaagtctcgcatctcctgat 13648926  T
Q  201 gaacttcagcttctggtgatctt 223  Q
    || ||| |||||||| |||||||    
T  13648927 gagctttagcttctgttgatctt 13648949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 33691867 - 33691653
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||| |||||||||||||||||||||||||||||||||||        |||||||| || ||||| || ||| ||  ||    
T  33691867 aaacagagtagtggaggtagtggttatacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaagcatctaacgcctttaaattctttcaaa 33691769  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||||||||||||||||| |   |||||||||||||||||||||||| ||||||| | ||||||||||||||||||| ||||  ||||| |||||||||    
T  33691768 atagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccatttaacagcctttgaagctttatgtcttgcatctcctgatgaac 33691669  T
Q  205 ttcagcttctggtgat 220  Q
    |  |||||||||||||    
T  33691668 tagagcttctggtgat 33691653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 24788144 - 24788361
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||||||||||||||||  |||||        |||||| ||||||||||||| | | ||  ||    
T  24788144 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaattctctt-tgaagaacaagcacccaatgccttcaaatcctttcaaa 24788242  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     || ||||||||||||||| ||  |||||||||||||||||| || || ||||| | |||||| |||||||||||||||||||  ||||| || ||||||    
T  24788243 atattcgttgcttcactcttctagtcttctgcaatgcttagatgatattaaatctattgaacaacctttgaagctttaagtcttgcatctcctaatgaac 24788342  T
Q  205 ttcagcttctggtgatctt 223  Q
    |||||||||||||||||||    
T  24788343 ttcagcttctggtgatctt 24788361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 23280113 - 23279900
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| | | ||  ||    
T  23280113 aaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaa 23280015  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     ||| ||||||| |||| | |   |||||| |||||||||||| |||| |||||| ||||| |||||||||||||||||||||  ||||| |||||||||    
T  23280014 ctagccgttgctccacttttccagtcttctacaatgcttagacaagattaaatcc-atgaatagcctttgaagctttaagtcttgcatctcctgatgaac 23279916  T
Q  205 ttcagcttctggtgat 220  Q
    | || |||||||||||    
T  23279915 tacaacttctggtgat 23279900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 29935517 - 29935272
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||        |||||||||||||| ||||| | | ||    
T  29935517 acacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctctt-taaagaacaagcatccaatgctttcaaatccttt 29935419  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||||| ||| |||||||||||| |||   | ||| ||||  | |||||| ||||||||  |||||||||  ||||| |||||    
T  29935418 caaaatagtcgttgcttcactcttctggtcttctgcaatg-ttaagtgtgattaaatatattgaacaacctttgaaattttaagtcttgcatctcctgat 29935320  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatga 250  Q
    |||||| ||||||||||||||  ||| |||||||||||||| | ||||||    
T  29935319 gaactttagcttctggtgatc--ttgcttctgatgagatgcttctgatga 29935272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 2500037 - 2500256
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||| ||||||        ||||||||||||| ||||| | | ||    
T  2500037 acacaaactgagtagtggagaaagtggttgtacactttgtacaattgtactttgtcaactctcttcaaaggat-aagcatccaatgctttcaaatccttt 2500135  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||| ||||||||||||| |   |||||||||||||||||||||||| ||||||| |||||| | |||||||||||||||||  ||||| ||||     
T  2500136 caaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacatttgaagctttaagtcttgcatctcctgaa 2500235  T
Q  201 gaacttcagcttctggtgatc 221  Q
     |||   ||||||||||||||    
T  2500236 aaacaagagcttctggtgatc 2500256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 30025904 - 30026138
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||| ||| ||    
T  30025904 acacaaactgagtagtagagatattggttgtacacttcgtacaattgtactttgtcaacgctctt-aaaagaacaagcatcgaatgccttcaa-ttcttt 30026001  T
Q  101 t-gaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctga 199  Q
    |  || ||| ||||||||||||||     |||||||| ||||||| ||||||  ||||||| ||| |||| |||||||||||||||||  |||||  |||    
T  30026002 tcaaaatagccgttgcttcactctttcagtcttctgcgatgcttatacgagactaaatccattgaccagcgtttgaagctttaagtcttgcatctcttga 30026101  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatga 236  Q
    ||||||  ||||||||||||||||  | |||||||||    
T  30026102 tgaactagagcttctggtgatcttcagcttctgatga 30026138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 9069565 - 9069847
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||| |||| |        ||||||| ||||||||| || | | ||  ||    
T  9069565 aaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaatgctcct-tgaagaacaagcatacaatgcctttaaatcctttcaaa 9069663  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||||||||||||||||| |   ||||||||||||||||||||| || ||||||  |||||| ||||||||||||||||| |  ||||| ||||||||     
T  9069664 atagtcgttgcttcactcttccagtcttctgcaatgcttagacgatattaaatcccttgaacaacctttgaagctttaagttttgcatctcctgatgaaa 9069763  T
Q  205 ttcagcttctggtgatcttttgattctgatg-agatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |  ||||||||||||| ||  | |||||||| |  ||  | |||| |||||| |||||||||| ||| |||||||| |||||||    
T  9069764 tagagcttctggtgattttcagcttctgatgaacttgtttctgataaacttgcttctgatgacgtcaccacttcagaagcactt 9069847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 13032213 - 13032045
Alignment:
Q  19 agataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgttgcttc 118  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||       || ||||| |||| ||||||||||||||||| |||| ||||||||    
T  13032213 agatagtggttgtacacttcgtacaattatactttgtcaacgctcttcaaaaagcca-gcatctaatgtcttcaacttcatttgaaatagttgttgcttc 13032115  T
Q  119 actctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcc-tttgaagctttaagtctc 188  Q
    ||||||||| ||||||||||| | ||| || ||| ||||||| |||||| || ||||||||||||||||||    
T  13032114 actctcctggtcttctgcaatac-taggcgtgattaaatccattgaacaaccatttgaagctttaagtctc 13032045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 5000981 - 5000784
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||       ||||||| |||||| ||||| | | ||    
T  5000981 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgttcttc-aaagaacaagcattcaatgctttcaaatccttt 5000883  T
Q  101 tgaattagtcgttgcttcac-tctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctg 198  Q
      || ||||||||||||||| |||| || |||| |||||||||| | ||||||  |||||| |||||| ||||||||||| |||||||  |||||||||    
T  5000882 caaaatagtcgttgcttcacttctcttggtcttttgcaatgcttgggcgagattgaatccattgaacaacctttgaagctctaagtcttgcatcttctg 5000784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 215
Target Start/End: Complemental strand, 30945505 - 30945304
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| | | ||  || ||||     
T  30945505 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaggaacaagcatccaatgccttcaaatcctttcaaaatagtt 30945407  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagc 210  Q
    ||||||||||| | |  ||||||| |||| |||||||||||| ||||||  |||||| ||||||||||||||||  |  ||||| |||||||||| ||||    
T  30945406 gttgcttcacttttccaatcttctacaatacttagacgagattaaatccgttgaacaacctttgaagctttaag--ttgcatctcctgatgaactgcagc 30945309  T
Q  211 ttctg 215  Q
    |||||    
T  30945308 ttctg 30945304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 30944478 - 30944271
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||||||| |||||||||||||||         ||||||||||||||||||| | | ||  ||    
T  30944478 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtattttgtcaacgctctttgaagaat-aagcatccaatgccttcaaatcctttcaaa 30944380  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||| ||||||||||| | |  |||||||||||| |||||||||||| ||||||  |||||| ||||||||||||||||  |  ||||| |||||||||    
T  30944379 atagttgttgcttcacttttccaatcttctgcaatacttagacgagattaaatccgttgaacaacctttgaagctttaag--ttgcatctcctgatgaac 30944282  T
Q  205 ttcagcttctg 215  Q
    | |||||||||    
T  30944281 tgcagcttctg 30944271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 287
Target Start/End: Original strand, 13880611 - 13880875
Alignment:
Q  25 tggttgtac-acttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgttgcttcactct 123  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||       |||||||||| ||||||||| | | |||||||||||||||||||||||||    
T  13880611 tggttgtaccacttcgtacaattgtcctttttcaacgctcttcaaagaa-caagcatccagtgccttcaaatccttttgaattagtcgttgcttcactct 13880709  T
Q  124 cctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaa--gtctctcatcttctgatgaacttcagcttctggtgatc 221  Q
     ||  ||||||||||||| ||| || ||| |||||   ||||||||||||||||||||||   |||||| |||||||||||  |||| || ||| |||      
T  13880710 tctagtcttctgcaatgc-taggcgtgattaaatcttttgaacagcctttgaagctttaattctctctcctcttctgatgatgttcaactcctgatgaaa 13880808  T
Q  222 ttttgattctgatga-gatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
       || ||||  ||| | ||| | ||||||||||| |||||||||| ||||||||||||||||||||    
T  13880809 aactgcttctagtgatgttgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 13880875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 211
Target Start/End: Complemental strand, 13894153 - 13893949
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||| | |||||||||| |||| |||| ||| ||        ||| ||| |||||||||||| | | ||||||    
T  13894153 aaacagagtagtggaggtagtggttgtacacgttgtacaattgtcctttttcaatgctttt-taaagaacaaacattcaatgccttcaaatccttttgaa 13894055  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
    |||| |||||||||||||| ||| ||||||||||||| ||| || ||| ||||||  |||||| ||||||||||||||||| | |||||||||||||| |    
T  13894054 ttagccgttgcttcactcttctggtcttctgcaatgc-taggcgtgattaaatcctttgaacaacctttgaagctttaagtatttcatcttctgatgatc 13893956  T
Q  205 ttcagct 211  Q
    |||||||    
T  13893955 ttcagct 13893949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 14193241 - 14193358
Alignment:
Q  170 ctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatc 269  Q
    ||||||||||||||||||  |||||  |||||||||  ||||| |||||||||| || ||||||| |||||| ||||||||||||| |||||||||| ||    
T  14193241 ctttgaagctttaagtcttgcatctcttgatgaactagagcttatggtgatcttctgcttctgataagatgcttatgatgaacttgcttctgatgacgtc 14193340  T
Q  270 atcacttcaggagcactt 287  Q
    ||||||||||||||||||    
T  14193341 atcacttcaggagcactt 14193358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 25 - 220
Target Start/End: Complemental strand, 9709937 - 9709745
Alignment:
Q  25 tggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctc 124  Q
    ||||| ||||||||||||| ||||||| |||||||||||||        |||||||| ||||||||||| | | ||  || ||| ||||||||||||||     
T  9709937 tggttttacacttcgtacagttgtactatgtcaacgctctt-tgaagaacaagcatctaatgccttcaaatcctttcaaactaggcgttgcttcactctt 9709839  T
Q  125 ctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgat 220  Q
    |   |||||||||||||||||||||||| ||||||| ||||||| |||||||||||||  | |  ||||| |||||||||| ||||||||||||||    
T  9709838 ccagtcttctgcaatgcttagacgagattaaatccattgaacaggctttgaagcttta--tgttgcatctcctgatgaactgcagcttctggtgat 9709745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 25 - 220
Target Start/End: Complemental strand, 28622491 - 28622299
Alignment:
Q  25 tggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctc 124  Q
    ||||||||||| ||||||||||||||||||||||||| |||        ||| |||||||||||||||| | | ||  |||||| |||||||||||| |     
T  28622491 tggttgtacacctcgtacaattgtactttgtcaacgccctt-tgaaaaacaaacatccaatgccttcaaatcctttcaaattagccgttgcttcactttt 28622393  T
Q  125 ctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgat 220  Q
    ||  | ||||||||||||||||||||||  |||||| |||||| | ||||||||||||||  |  ||||| |||||||||| ||||||||||||||    
T  28622392 ctagtattctgcaatgcttagacgagattgaatccattgaacaacttttgaagctttaag--ttgcatctcctgatgaactgcagcttctggtgat 28622299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 4494634 - 4494718
Alignment:
Q  131 ttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctg 215  Q
    |||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||||| ||||||||||||||||||||    
T  4494634 ttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttctg 4494718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 331644 - 331877
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||| ||||||||| || ||||||||||||||||||| |||||||||||||||||| ||         ||||||||||||||||||  | | ||    
T  331644 acacaaactgtgtagtggaggtagtggttgtacacttcgtacatttgtactttgtcaacgctttt--gagcaataagcatccaatgccttcagatccttt 331741  T
Q  101 -tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctga 199  Q
       || |||  ||||||||||||| |   ||||||||||||||| |||||  |  ||||||   |||| |||||||||||||||||| | ||||| ||||    
T  331742 caaaaatagctgttgcttcactcttccagtcttctgcaatgcttggacgaccttgaatccataaaacaacctttgaagctttaagtc-cgcatctcctga 331840  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatga 236  Q
    || |||||||||||||||||||||  | |||||||||    
T  331841 tggacttcagcttctggtgatcttcagcttctgatga 331877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 286
Target Start/End: Complemental strand, 12174476 - 12174216
Alignment:
Q  25 tggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctc 124  Q
    ||||||||||||||||||||  |||||||||||||||||||        |||||||||||||| ||||| | | ||  || |||||||||||||||| |     
T  12174476 tggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagtcgttgcttcactttt 12174377  T
Q  125 ctgatcttctgcaatgcttagacgagatcaaatccaat-gaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgatctt 223  Q
    |   ||||||||||| |||||||||| |  ||||| ||  |||||| |||||||| |||||  |  |||| ||||||||||| |||||||||||||| ||    
T  12174376 ccagtcttctgcaatccttagacgaggttgaatcccataaaacagcttttgaagc-ttaag--ttgcatcctctgatgaactgcagcttctggtgatttt 12174280  T
Q  224 ttgattctgat-gagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcact 286  Q
    | | |||||||  |  ||| | ||||||||| | || ||||||| |||||||||||||||||||    
T  12174279 tagcttctgataaacttgcttctgatgaactcgcttttgatgacgtcatcacttcaggagcact 12174216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 301
Target Start/End: Original strand, 13303026 - 13303136
Alignment:
Q  191 atcttctgatgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctc 290  Q
    |||||| | ||| |||||||||||| |||||||  | |||||||||||||| | ||||||| ||| |||| ||||| |||||||||||||||||||||||    
T  13303026 atcttcaggtgatcttcagcttctgatgatcttcagcttctgatgagatgcttctgatgaagttgcttctaatgacgtcatcacttcaggagcacttctc 13303125  T
Q  291 ttcagatgctt 301  Q
    |||||| ||||    
T  13303126 ttcagacgctt 13303136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 16310066 - 16309975
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaa 93  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||       ||||||||||||||||||||    
T  16310066 acacaaactgagtagtgtagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttc-aaagaacaagcatccaatgccttcaa 16309975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 48237051 - 48236845
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||         |||||||  |||||||||| | | ||  || | |||    
T  48237051 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaagaataagcatctgatgccttcaaatcctttcaaacttgtc 48236953  T
Q  111 gttgcttca-ctctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
    ||||||||| || | | | |||| |||||||||||||||||||  |||||| |||||| | ||||||||||||||  |  ||||| |||||||||| |||    
T  48236952 gttgcttcaccttttcag-tcttatgcaatgcttagacgagattgaatccattgaacaacttttgaagctttaag--ttgcatctcctgatgaactgcag 48236856  T
Q  210 cttctggtgat 220  Q
    |||||||||||    
T  48236855 cttctggtgat 48236845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 16112039 - 16111979
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16112039 aaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctt 16111979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 33605694 - 33605901
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    ||||||| || || ||||||||||||||||||||| |||||||||||||||||||        |||||||||||||||||||| | | ||  || |||||    
T  33605694 agtagtgaaggtagtggttgtacacttcgtacaatcgtactttgtcaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 33605792  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcc-tttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
     |||||||| | | |   || |||||| |||||||||||||| ||||||  |||| |||| ||||||||||||  | |  ||||| |||||||||| |||    
T  33605793 attgcttcaattttccagtcatctgcattgcttagacgagattaaatccgttgaaaagccttttgaagcttta--tgttgcatctcctgatgaactgcag 33605890  T
Q  210 cttctggtgat 220  Q
    |||||||||||    
T  33605891 cttctggtgat 33605901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 287
Target Start/End: Complemental strand, 35952843 - 35952562
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||| ||||| || ||||||||||||||||||||  |||||||||||||||||||        ||| |||||||||||||||| | | ||  ||    
T  35952843 aaacagagtaatggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt-tgatgaacaaacatccaatgccttcaaatcctttcaaa 35952745  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaat-ccaatgaacagcctttgaagctttaagtctctcatcttctgatgaa 203  Q
     |||||||||||||||| | |   |||||| |||| |||||||||| |  ||| ||| | |||||| |||||||| |||||  |  |||| |||||||||    
T  35952744 atagtcgttgcttcacttttccagtcttcttcaatccttagacgaggttgaatcccattaaacagcttttgaagccttaag--ttgcatcctctgatgaa 35952647  T
Q  204 cttcagcttctggtgatcttttgattctgat-gagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    || || ||||||||||| ||| | |||||||  |  ||| | ||||||| ||| |||||||| | |||||||||||||| |||||    
T  35952646 ctgcaacttctggtgatttttagcttctgataaacttgcttctgatgaatttgcttctgatgtcgtcatcacttcaggaacactt 35952562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 9098258 - 9098205
Alignment:
Q  162 tgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctg 215  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  9098258 tgaacagcctttgaagctttaattctctcatcttctgatgatcttcagcttctg 9098205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 321
Target Start/End: Original strand, 24788359 - 24788428
Alignment:
Q  252 cttgattctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||  |||| ||||| ||||    
T  24788359 cttgcttctgatgacgtcatcacttcaggagcacttctcttcagatgcttcaagcttccattttgttgat 24788428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 185
Target Start/End: Original strand, 14426550 - 14426729
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||| ||||||  |||||||||||||||||||        |||||||||||||||||||| | | ||  ||    
T  14426550 aaacagagtagtggaggtagtggttgtacacttagtacaaacgtactttgtcaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaa 14426648  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagt 185  Q
     |||||||||||||||| | |   |||||||||||  ||||| ||| |  |||||| | |||||| | |||||||||||||    
T  14426649 atagtcgttgcttcacttttccagtcttctgcaatctttagatgagtttgaatccattaaacagcttctgaagctttaagt 14426729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 1293033 - 1293093
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  1293033 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 1293093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 185
Target Start/End: Complemental strand, 13472635 - 13472555
Alignment:
Q  106 tagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcc-tttgaagctttaagt 185  Q
    |||| |||||||||||||  ||||||||| ||||||||||||||||| ||||||| |||||| || ||| |||||||||||    
T  13472635 tagttgttgcttcactcttatgatcttctacaatgcttagacgagattaaatccattgaacaaccttttaaagctttaagt 13472555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 4821477 - 4821756
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||  ||||||| |||||||||||        ||||||||||||||||||||  || ||  ||    
T  4821477 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttttcaacgctctt-tgaagaacaagcatccaatgccttcaa-atctttcaaa 4821574  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     ||| ||||||| |||| | ||  ||||||| |||  ||||||||| |  |||    | |||||| ||||||||||||||| | | |||| | |||||||    
T  4821575 atagccgttgctccacttttctagtcttctgtaatctttagacgagtttgaatttgttaaacagcttttgaagctttaagt-tgt-atctccggatgaac 4821672  T
Q  205 ttcagcttctggtgatcttttgattctgatg-agatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    | |||||||||||||| ||  | |||||| | |  ||| | |||||| |||| || ||||||| ||||||||||||||||||||    
T  4821673 tgcagcttctggtgattttcagcttctgacgaacttgcttctgatgaccttgcttttgatgacgtcatcacttcaggagcactt 4821756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 13730622 - 13730560
Alignment:
Q  231 tgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttc 293  Q
    ||||||||||| | | ||||||||| || ||||||| ||||||||||||||||||||||||||    
T  13730622 tgatgagatgcttctaatgaacttgtttatgatgacgtcatcacttcaggagcacttctcttc 13730560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 296
Target Start/End: Complemental strand, 9098158 - 9098109
Alignment:
Q  247 atgaacttgattctgatgacatcatcacttcaggagcacttctcttcaga 296  Q
    ||||||||| |||||||||||||||||||||||||||||||  |||||||    
T  9098158 atgaacttgcttctgatgacatcatcacttcaggagcacttgacttcaga 9098109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 14193117 - 14193234
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||| ||| || ||||||||||||||||||| ||||||||||| |||||||||        ||||||| |||||||||||| | | ||  ||    
T  14193117 aaacagagtagtagaggtagtggttgtacacttcgtacacttgtactttgttaacgctctt-tgaagaacaagcattcaatgccttcaaatcctttcaaa 14193215  T
Q  105 ttagtcgttgcttcactct 123  Q
     ||||||||||||||||||    
T  14193216 atagtcgttgcttcactct 14193234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 9098381 - 9098284
Alignment:
Q  25 tggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgttgcttcactct 123  Q
    |||||||||||||||||||||||| |||| ||||||||||||       ||| |||| ||||| ||||| | | |||||||||| ||||||||||||||    
T  9098381 tggttgtacacttcgtacaattgtcctttttcaacgctcttc-aaagaacaaacatctaatgcattcaaatccttttgaattagccgttgcttcactct 9098284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 13137795 - 13137747
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  13137795 acttcaggagcacttctcttcagatgcttcaagcttcctttttgttgat 13137747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 14425450 - 14425510
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||| | |||||||||||||    
T  14425450 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtaatatgtcaacgctctt 14425510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 19711168 - 19711108
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||| ||| ||||||||||||||||||||  |||||||||||| ||||||    
T  19711168 aaacagagtagtggaaatagtggttgtacacttcgtacaaacgtactttgtcaatgctctt 19711108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 21695629 - 21695705
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||| || ||||||| ||||||||||| ||||||||||||||| | | |||||  |||||||||| ||||    
T  21695629 tgatgaacttgcttatgatgacgtcatcacttcaagagcacttctcttcaaacgattcaagcttcctttttgttgat 21695705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 41842194 - 41842130
Alignment:
Q  257 ttctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||  |||||||||||||||||||| ||||||||||| ||||  |||||||||| ||||    
T  41842194 ttctgatgatttcatcacttcaggagcacttttcttcagatgcatcaagcttcctttttgttgat 41842130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 44467337 - 44467385
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  44467337 acttcaggagcacttctcttcagatgcttcaaacttcctttttgttgat 44467385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 48800512 - 48800464
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  48800512 acttcaggagcacttctcttcagatgcttcaagcttcctttttgttgat 48800464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 321
Target Start/End: Original strand, 2500313 - 2500360
Alignment:
Q  274 cttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||    
T  2500313 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgat 2500360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 19339400 - 19339345
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    ||||||||||| || ||||||||||||||||||||  ||||| |||||||||||||    
T  19339400 gagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 19339345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 13692374 - 13692408
Alignment:
Q  25 tggttgtacacttcgtacaattgtactttgtcaac 59  Q
    |||||||||||||||||||||||||||||||||||    
T  13692374 tggttgtacacttcgtacaattgtactttgtcaac 13692408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 30026133 - 30026175
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  30026133 tgatgaacttgcttctgatgacgtcatcacttcaggagcactt 30026175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 27871721 - 27871778
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgct 62  Q
    |||| ||||||||||| || ||||||||||||||||||||  ||||| ||||||||||    
T  27871721 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgct 27871778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 2265674 - 2265614
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||| ||||||| || ||||||||||||||||||||  ||||| |||||||||||||    
T  2265674 aaacagagcagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 2265614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 4494760 - 4494808
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||| |||||||||||  |||||||||| ||||    
T  4494760 acttcaggagcacttctctttagatgcttcaagcttcctttttgttgat 4494808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 8182933 - 8182993
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| |||||||||||||||||||   ||| | |||||||||||||    
T  8182933 aaacagagtagtggagatagtggttgtacacttcgtacagacgtattatgtcaacgctctt 8182993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 8183172 - 8183212
Alignment:
Q  247 atgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  8183172 atgaacttgcttctgatgacgtcatcacttcaggagcactt 8183212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 11793194 - 11793242
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||||| ||||||||||||||  |||||||||| ||||    
T  11793194 acttcaggagcacttcttttcagatgcttcaagcttcctttttgttgat 11793242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 30026178 - 30026226
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||| ||||||||||||||||||||||||  |||||||||| ||||    
T  30026178 acttcagaagcacttctcttcagatgcttcaagcttcctttttgttgat 30026226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 48062975 - 48062915
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||| |||||||| ||||||||| ||||||||||  ||||| |||||||||||||    
T  48062975 aaacagagtaatggagatagtggttgtacgcttcgtacaaacgtactatgtcaacgctctt 48062915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 4494585 - 4494628
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtacttt 53  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||    
T  4494585 gagtagtggaggtagcggttgtacacttcgtacaattgtacttt 4494628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 304
Target Start/End: Original strand, 21692509 - 21692556
Alignment:
Q  257 ttctgatgacatcatcacttcaggagcacttctcttcagatgcttcaa 304  Q
    |||||||||||||||||||||| ||||||||  ||||||| |||||||    
T  21692509 ttctgatgacatcatcacttcatgagcactttgcttcagacgcttcaa 21692556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 27871936 - 27871979
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcacttc 288  Q
    ||||||||||| |||||||||| |||| ||||||||||||||||    
T  27871936 tgatgaacttgcttctgatgacgtcattacttcaggagcacttc 27871979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 29935280 - 29935241
Alignment:
Q  257 ttctgatgacatcatcacttcaggagcacttctcttcaga 296  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  29935280 ttctgatgacatcatcacttcaggagcacttgacttcaga 29935241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 48062746 - 48062703
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcacttc 288  Q
    ||||||||||| |||||||| | |||||||||||||||||||||    
T  48062746 tgatgaacttgcttctgatggcgtcatcacttcaggagcacttc 48062703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 1293190 - 1293232
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| ||||||| || ||||||||||||||||||||    
T  1293190 tgatgaacttgcttctgataacgtcatcacttcaggagcactt 1293232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 5826190 - 5826232
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| |||| |||||||||||||||    
T  5826190 tgatgaacttgcttctgatgacttcattacttcaggagcactt 5826232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 7339816 - 7339774
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||    
T  7339816 tgatgaacttgcttctgatgacgtcaccacttcaggagcactt 7339774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 14426756 - 14426798
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||    
T  14426756 tgatgaacttgcttctgatgacgtcaccacttcaggagcactt 14426798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 16556647 - 16556577
Alignment:
Q  246 gatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttcctttttg 316  Q
    |||| ||||| |||||||||| ||| ||||||||||||| || |||||||| |||| ||  ||||||||||    
T  16556647 gatgtacttgcttctgatgacgtcaccacttcaggagcagttttcttcagacgctttaagcttcctttttg 16556577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 316
Target Start/End: Original strand, 16609015 - 16609085
Alignment:
Q  246 gatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttcctttttg 316  Q
    |||| ||||| |||||||||| ||| ||||||||||||| || |||||||| |||| ||  ||||||||||    
T  16609015 gatgtacttgcttctgatgacgtcaccacttcaggagcagttttcttcagacgctttaagcttcctttttg 16609085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 30945305 - 30945263
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||    
T  30945305 tgatgaacttgcttctgatgacgtcaccacttcaggagcactt 30945263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 15704531 - 15704445
Alignment:
Q  129 tcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggt 217  Q
    |||||||||||  ||||||||| |  |||||  | |||||| ||||||||||||||| ||  ||||||||||||||| || ||||||||    
T  15704531 tcttctgcaatctttagacgagtttgaatccgttaaacagcttttgaagctttaagtttc--atcttctgatgaactacaacttctggt 15704445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 24794870 - 24794813
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgct 62  Q
    |||| ||||||||||  || ||||||||||||||||||||  ||||| ||||||||||    
T  24794870 aaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgct 24794813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 286
Target Start/End: Original strand, 44467293 - 44467334
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcact 286  Q
    ||||||||||| |||||||| | |||||||||||||||||||    
T  44467293 tgatgaacttgcttctgatggcgtcatcacttcaggagcact 44467334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 5000726 - 5000678
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||| |||||||||||||||| |||||  |||||||||| ||||    
T  5000726 acttcaggatcacttctcttcagatgtttcaaacttcctttttgttgat 5000678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 151; Significance: 7e-80; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 9959 - 10271
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||       |||||||| ||||||||||| ||||||    
T  9959 acacaaactgagtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaa-caagcatcgaatgccttcaaattcatt 10057  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcc-tttgaagctttaagtctctcatcttctga 199  Q
    |||||||| ||||||||||||||  || |||||||||||||| || || ||| ||||||| ||||||||| ||||||||||||||||||| |||||||||    
T  10058 tgaattagccgttgcttcactcttatggtcttctgcaatgct-aggcgtgattaaatccattgaacagccatttgaagctttaagtctcttatcttctga 10156  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgc 299  Q
    |||||||||||||||||||| |||| | |||| ||  | || || |||||||||||| ||||||||| |||||||||||||||||||| |||||||| ||    
T  10157 tgaacttcagcttctggtgaactttagcttcttatatggtg-ctctgatgaacttga-tctgatgacgtcatcacttcaggagcacttttcttcagacgc 10254  T
Q  300 ttcaattttcctttttg 316  Q
    |||||  ||||||||||    
T  10255 ttcaagcttcctttttg 10271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 7e-80; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 23881066 - 23881347
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||||||||||||    
T  23881066 acacaaactaagtagtggagatagtggttgtacacttcgtacaattgcactttgtcaacgctcttcaaaaag-caagcatccaatgccttcaacttcatt 23881164  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcc-tttgaagctttaagtctctcatcttctga 199  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||| || ||| ||||||| | |||| || ||||||||||| |||||||||||||||||    
T  23881165 tgaattagtcgttgcttcactctcctggtcttctgcaatgc-taggcgtgattaaatccattaaacaaccttttgaagcttt-agtctctcatcttctga 23881262  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagca 284  Q
    ||||||||||||||||||| ||||  | |||||||||| ||| | |||||| |||| |||||||||  |||||||||||||||||    
T  23881263 tgaacttcagcttctggtgttcttcagcttctgatgaggtgcttctgatgaccttgcttctgatgatgtcatcacttcaggagca 23881347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 21099842 - 21099558
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||| |||||       ||||||||||||||||||| |||||||    
T  21099842 acacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtaaacgttcttcaaaagg-caagcatccaatgccttcagcttcatt 21099744  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    ||||||||| |||||||||||||| || |||| || |||||| || |  ||| ||||||| | |||||||||||||||||||||||||| ||||||||||    
T  21099743 tgaattagttgttgcttcactctcttggtcttttgtaatgct-aggcatgattaaatccatttaacagcctttgaagctttaagtctctgatcttctgat 21099645  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||| ||||||||||||| ||  | |||||||||| ||| | ||||||||||| |||||||||| ||||||||||||||||||||    
T  21099644 gaactttagcttctggtgattttcagcttctgatgaggtgcttttgatgaacttgcttctgatgacgtcatcacttcaggagcactt 21099558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 287
Target Start/End: Complemental strand, 642836 - 642561
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| |||||||||||     
T  642836 gagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaaaa-caagcatccaatgccttcaactttatttgaattagc 642738  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
    ||||| |||||||||||||||||||| |||||| ||  | ||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||     
T  642737 cgttgtttcactctcctgatcttctgtaatgct-aggtgtgattaaatccattgaacaacctttgaagctttaagtctctcatcttctgatgaactgcaa 642639  T
Q  210 cttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
     |||||||||||||  |  ||| ||||| ||| | ||||||||||| |||||||||| |||||||||||| |||||||    
T  642638 tttctggtgatcttcagcatctcatgaggtgcttctgatgaacttgcttctgatgacgtcatcacttcagaagcactt 642561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 17814967 - 17815250
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||       |||||||| ||||| ||||| | | ||    
T  17814967 acacaaactgagtagtggagatagtggttgtacactccgtacaattgtactttgtcaacgctcttcaaagaa-caagcatctaatgctttcaaatccttt 17815065  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
       | |||||||||||||||||| |   |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||  |||||  ||||    
T  17815066 cagaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatctcttgat 17815165  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||| || ||||||||||||||  ||| |||||||||||||| | ||||||||||| | |||||||| ||||||||||||||||||||    
T  17815166 gaaatttagcttctggtgatc--ttgcttctgatgagatgcttctgatgaacttgctactgatgacgtcatcacttcaggagcactt 17815250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 23413112 - 23412809
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||       |||||||||||||| ||||| | | ||    
T  23413112 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaaaaa-caagcatccaatgctttcaaatccttt 23413014  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || || ||||||||||||||| ||| ||||||||||||||| || ||||| ||||||| |||||| |||||||||||||||||||  ||||| |||||    
T  23413013 caaaataatcgttgcttcactcttctggtcttctgcaatgcttggatgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgat 23412914  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgct 300  Q
    ||||||||||||||||||||||                ||| | ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  23412913 gaacttcagcttctggtgatct----------------tgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttctcttcagatgct 23412830  T
Q  301 tcaattttcctttttgatgat 321  Q
    ||||  |||||||||| ||||    
T  23412829 tcaagcttcctttttgttgat 23412809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 9398872 - 9398649
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||        |||||| |||||||||||||||||||    
T  9398872 acacaaactgagtagtggagatagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaaaagt-aagcattcaatgccttcaacttcatt 9398774  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    |||||||||||||||| |||||||||||||||           |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  9398773 tgaattagtcgttgctccactctcctgatctt-----------agacgagatcaaatccaatgaacaacctttgaacctttaagtctctcatcttctgat 9398685  T
Q  201 gaacttcagcttctggtgatcttttgattctgatga 236  Q
    |||||||| ||||||||||||||  | |||||||||    
T  9398684 gaacttcaacttctggtgatcttgagcttctgatga 9398649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 12352933 - 12352763
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||| |||||||||    
T  12352933 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaaatg-caagcatccaatgcctttaacttcatt 12352835  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctt 172  Q
    |||||||| | ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12352834 tgaattagccattgcttcaccctcctgatcttctgcaatgcttagacaagatcaaatccaatgaacagcctt 12352763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 19536439 - 19536155
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||       ||| |||||||||| ||||| | ||||    
T  19536439 acacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaa-caaacatccaatgctttcaaatccatt 19536341  T
Q  101 tgaattagtcgttgcttcactc-tcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctga 199  Q
      ||  |||||||||||||||| |  || |||| |||||||||| ||||||||  |||||| ||||||||| ||||||||||||||||  ||||| ||||    
T  19536340 caaaaaagtcgttgcttcactccttttggtcttttgcaatgcttggacgagattgaatccattgaacagcccttgaagctttaagtcttgcatctcctga 19536241  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||| |||||| | ||||  ||| |||||||||||||| | ||||||||||  |||||||||| ||||||||||||||||||||    
T  19536240 tgaacttctgcttcttgcgatc--ttgcttctgatgagatgcttctgatgaacttacttctgatgacgtcatcacttcaggagcactt 19536155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 6499238 - 6499471
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||||||||||    
T  6499238 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttc-aaaaagcaagcatccgatgccttcaacttcatt 6499336  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcc-tttgaagctttaagtctctcatcttctga 199  Q
    |||| |||  ||||||||||||||||| ||||||||||| | | |  | ||| ||||||| |||||| || ||||||||||||||  ||||||||||  |    
T  6499337 tgaaatagatgttgcttcactctcctggtcttctgcaatac-tgggtgtgattaaatccattgaacaaccttttgaagctttaag--tctcatcttcata 6499433  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatgag 237  Q
    |||||||||||||||||||||||| || ||||||||||    
T  6499434 tgaacttcagcttctggtgatcttctgcttctgatgag 6499471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 89560 - 89339
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||       ||||||| |||||| ||||| ||| ||    
T  89560 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaatgctcttcaaagaa-caagcatgcaatgctttcaaattcttt 89462  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||||| ||| ||||||||||| |||||||||||| ||||||| |||||| | ||||||||||||||| |  ||||| |||||    
T  89461 caaaatagtcgttgcttcactcttctggtcttctgcaattcttagacgagattaaatccattgaacaacttttgaagctttaagttttgcatctcctgat 89362  T
Q  201 gaacttcagcttctggtgatctt 223  Q
    ||||| || ||||||||||||||    
T  89361 gaactacaacttctggtgatctt 89339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 5 - 266
Target Start/End: Complemental strand, 7745827 - 7745569
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| | | ||  ||    
T  7745827 aaaccgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaa 7745729  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||| ||||||||||||| ||  |||||| |||||||| || | ||| ||||||| |||||| |||||||||||||||||||  ||||| |||||| ||    
T  7745728 atagttgttgcttcactcttctagtcttctccaatgcttggatgcgattaaatccattgaacaacctttgaagctttaagtcttacatctcctgatgtac 7745629  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgac 266  Q
    |||||||||| ||||||  ||| |||||||||||||| | ||||||||||| |||| |||||    
T  7745628 ttcagcttcttgtgatc--ttgcttctgatgagatgcttttgatgaacttgcttcttatgac 7745569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 21910555 - 21910776
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| | | ||    
T  21910555 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttc-aaagaacaagcatccaatgccttcaaatccttt 21910653  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || || ||||||||||||| | |   |||| || |||||||||||||||| ||||| | | |||||||||||| |||||||||||  ||||| |||||    
T  21910654 caaaataatcgttgcttcacttttccagtcttttgtaatgcttagacgagattaaatcaattcaacagcctttgacgctttaagtcttgcatctcctgat 21910753  T
Q  201 gaacttcagcttctggtgatctt 223  Q
    |||||| ||||||||||||||||    
T  21910754 gaactttagcttctggtgatctt 21910776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 21072378 - 21072131
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||       |||||||||||||| ||||| | | ||    
T  21072378 acacaaactgagtagtagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaa-caagcatccaatgctttcaaatccttt 21072280  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||| ||||||||||||| ||| ||||||||||||||  || | ||| |||||||  ||||| ||||| |||||||||||||  ||||| |||||    
T  21072279 caaaatagttgttgcttcactcttctggtcttctgcaatgctgtga-gtgattaaatccatagaacaaccttttaagctttaagtcttgcatctcctgat 21072181  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatga 250  Q
    |||||||||||||||||||||||  | |||||||||||||| | ||||||    
T  21072180 gaacttcagcttctggtgatcttcagcttctgatgagatgcttctgatga 21072131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 21199141 - 21198925
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||| |||       | |||||||||||||||||| ||||||    
T  21199141 acacaaactgagtagtggaggtagtgattgtacacttcgtacaattgtactttgtcaacgct-ttccaaagaacgagcatccaatgccttcaaattcatt 21199043  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    |||||||| ||||||| || | | ||| ||||||||| | || || || ||| ||||||  |||||| ||||||||||||||||||||||||||||||||    
T  21199042 tgaattagccgttgct-catttttctggtcttctgcagtact-aggcgtgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgat 21198945  T
Q  201 gaacttcagcttctggtgat 220  Q
    ||||||||||| ||||||||    
T  21198944 gaacttcagctcctggtgat 21198925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 6512566 - 6512348
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||       |||||   |||||||||||| | | ||    
T  6512566 acacaaactgagtagtgaagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagc---caatgccttcaaatccttt 6512471  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||||| |   ||||| |||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||||| |||||    
T  6512470 caaaatagtcgttgcttcactcttccagtcttcagcaatgcttagacgagattaaatccactgaacaacctttgaagctttaagtcttgcatctcctgat 6512371  T
Q  201 gaacttcagcttctggtgatctt 223  Q
    ||||| || ||||| ||||||||    
T  6512370 gaactacaacttctagtgatctt 6512348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 5 - 315
Target Start/End: Original strand, 20550898 - 20551190
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||||||| |||||||||||||||        |||||||||||||||||||| |   ||  ||    
T  20550898 aaacagagtagtggaggtagtggttgtacacttcgtacaattgta-tttgtcaacgctctt-taaagaacaagcatccaatgccttcaaatcttttcaaa 20550995  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcc-tttgaagctttaagtctctcatcttctgatgaa 203  Q
     |||||||||||||||||| ||  | |||||||||||||||||||||| ||| ||| |||||| || |||||||||||||||||  ||||| ||||||||    
T  20550996 atagtcgttgcttcactcttctagttttctgcaatgcttagacgagattaaaaccattgaacaaccttttgaagctttaagtcttgcatctcctgatgaa 20551095  T
Q  204 cttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgcttca 303  Q
    |||||||                 |||||||||||||| | | |||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  20551096 cttcagc-----------------ttctgatgagatgcttctaatgagcttgcttctgatgacgtcatcacttcaggagcacttctcttcagatgcttca 20551178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 41566572 - 41566338
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||        || |||||||||||||||| | | ||    
T  41566572 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatatcaacgctcttcaaagaataaa-catccaatgccttcaaatccttt 41566474  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || ||| |||||||||||| | ||  |||||||||||||||||||||||| ||||||| |||| ||| |||||||||||||||||  ||||| |||||    
T  41566473 caaaatagacgttgcttcacttttctagtcttctgcaatgcttagacgagattaaatccattgaatagcttttgaagctttaagtcttgcatctcctgat 41566374  T
Q  201 gaacttcagcttctggtgatcttttgattctgatga 236  Q
    ||||| || |||||| |||||||  | |||||||||    
T  41566373 gaactacaacttctgatgatcttcagcttctgatga 41566338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 26784353 - 26784587
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||        ||||||||| | | | ||| | | ||    
T  26784353 acacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaat-aagcatccagttcttccaaatccttt 26784451  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || ||||||||||||||||   ||| |||| |||||||||| ||||||||  |||||| |||||||||||| ||||||||| |||  ||||| ||| |    
T  26784452 caaaatagtcgttgcttcactgctctggtcttttgcaatgcttggacgagattgaatccattgaacagcctttaaagctttaaatcttgcatctcctgct 26784551  T
Q  201 gaacttcagcttctggtgatcttttgattctgatga 236  Q
    ||||| |||||||||||||||||  | |||||||||    
T  26784552 gaactacagcttctggtgatcttcagcttctgatga 26784587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 182
Target Start/End: Original strand, 33022673 - 33022843
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||        ||| |||||||||||||||| | | ||  || |||||    
T  33022673 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaaacatccaatgccttcaaatcctttcaaactagtc 33022771  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagcttta 182  Q
    ||||||||||| | |   |||||||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  33022772 gttgcttcacttttccagtcttctgcaatgcttagatgagattaaatccattgaacagcctttgaagcttta 33022843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 5 - 211
Target Start/End: Complemental strand, 25096960 - 25096753
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgt---caacgctcttcnnnnnnncaagcatccaatgccttcaacttcattt 101  Q
    |||| ||||||||||| || |||||||||||||||||||||||| |||| |   ||||||||||        ||||||||||||| |||||| | | |||    
T  25096960 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtccttttttttcaacgctctt-taaagaacaagcatccaatgtcttcaaatcctttt 25096862  T
Q  102 gaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatg 201  Q
    |||||| ||||||||||||||| ||| ||||||||||||| ||| ||  || ||||||  |||||| ||||||||||||||||||||| ||||| |||||    
T  25096861 gaattaatcgttgcttcactcttctggtcttctgcaatgc-taggcgtaattaaatcctttgaacaacctttgaagctttaagtctcttatcttatgatg 25096763  T
Q  202 aacttcagct 211  Q
    | ||||||||    
T  25096762 atcttcagct 25096753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 5 - 211
Target Start/End: Complemental strand, 25154930 - 25154723
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgt---caacgctcttcnnnnnnncaagcatccaatgccttcaacttcattt 101  Q
    |||| ||||||||||| || |||||||||||||||||||||||| |||| |   ||||||||||        ||||||||||||| |||||| | | |||    
T  25154930 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtccttttttttcaacgctctt-taaagaacaagcatccaatgtcttcaaatcctttt 25154832  T
Q  102 gaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatg 201  Q
    |||||| ||||||||||||||| ||| ||||||||||||| ||| ||  || ||||||  |||||| ||||||||||||||||||||| ||||| |||||    
T  25154831 gaattaatcgttgcttcactcttctggtcttctgcaatgc-taggcgtaattaaatcctttgaacaacctttgaagctttaagtctcttatcttatgatg 25154733  T
Q  202 aacttcagct 211  Q
    | ||||||||    
T  25154732 atcttcagct 25154723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 200 - 321
Target Start/End: Complemental strand, 12352758 - 12352637
Alignment:
Q  200 tgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgc 299  Q
    ||||||||||||||||||||||||  | |||||||||||||| | ||||||||||| || ||||||| |||  |||||||||||||||||||||||||||    
T  12352758 tgaacttcagcttctggtgatcttcagcttctgatgagatgcttttgatgaacttgcttttgatgacgtcagtacttcaggagcacttctcttcagatgc 12352659  T
Q  300 ttcaattttcctttttgatgat 321  Q
    |||||  |||||||||| ||||    
T  12352658 ttcaagcttcctttttgttgat 12352637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 205
Target Start/End: Complemental strand, 13545641 - 13545455
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    ||||||||||| |  ||||||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||| | | ||  || ||||    
T  13545641 gagtagtggaggtggtggttgtacacttcgtacacttgtactttgtcaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaagtagt 13545543  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaact 205  Q
     |||||||||||||        ||||||||||||||||||||| || |||| |||||| |||||||||||||||||||  ||||| ||||||||||    
T  13545542 tgttgcttcactct--------tctgcaatgcttagacgagattaagtccattgaacaacctttgaagctttaagtcttgcatctcctgatgaact 13545455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 215
Target Start/End: Original strand, 31117880 - 31118088
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||  || ||| ||||||||||||||| ||||||||||||||| |||||        |||||||||||||||||||| ||| ||  ||    
T  31117880 aaacagagtagtggaagtagtggatgtacacttcgtacatttgtactttgtcaacactctt-tgaagaacaagcatccaatgccttcaaattctttcaaa 31117978  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcc-tttgaagctttaagtctctcatcttctgatgaa 203  Q
    ||||||||||||||||| | |   |||||||||||||||||||||| | ||||||  | |||| || ||||||||||||  | |  ||||| ||||||||    
T  31117979 ttagtcgttgcttcacttttccagtcttctgcaatgcttagacgagtttaaatccgttaaacaaccttttgaagcttta--tgttgcatctcctgatgaa 31118076  T
Q  204 cttcagcttctg 215  Q
    || |||||||||    
T  31118077 ctgcagcttctg 31118088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 11993891 - 11994103
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||  || |||||||||||||||||||   |||||||||||||||||||        |||||||||||||| ||||| | | ||  ||    
T  11993891 aaacagagtagtggaagtagtggttgtacacttcgtacatacgtactttgtcaacgctctt-tgaagaacaagcatccaatgctttcaaatcccttcaaa 11993989  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
    |||| |||||||||||| | |   ||||||||||| |||||||||| |  |||||  |||||| | |||||| ||||||||  |  |||| |||||||||    
T  11993990 ttagccgttgcttcactattccagtcttctgcaatccttagacgagtttgaatccgttgaacatcttttgaaactttaagttgc--atctcctgatgaac 11994087  T
Q  205 ttcagcttctggtgat 220  Q
    | ||||||||||||||    
T  11994088 tacagcttctggtgat 11994103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 25096704 - 25096629
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||  |||||| ||| ||||    
T  25096704 tgatgaacttgcttctgatgacgtcatcacttcaggagcactt-tcttcagatgcttcaaacttccttcttgttgat 25096629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 25154674 - 25154599
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||  |||||| ||| ||||    
T  25154674 tgatgaacttgcttctgatgacgtcatcacttcaggagcactt-tcttcagatgcttcaaacttccttcttgttgat 25154599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 42243683 - 42243896
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||  ||| |||||||||||||||        ||| |||| |||| |||||| | | ||  ||    
T  42243683 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtattttgtcaacgctcttttaaggaacaaacatcaaatgtcttcaaatcctttcaaa 42243782  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||| ||||||||||| | |   |||||||||||  ||||||||| |  |||||  | |||||| ||||||||||||||  |  ||||| |||||||||    
T  42243783 atagttgttgcttcacttttccagtcttctgcaatttttagacgagtttgaatccgttaaacagcttttgaagctttaag--ttgcatctcctgatgaac 42243880  T
Q  205 ttcagcttctggtgat 220  Q
    | ||||||||||||||    
T  42243881 tacagcttctggtgat 42243896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 217
Target Start/End: Complemental strand, 14086673 - 14086462
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| ||  |||||||||||||||||||  |||||||||||||||||||        |||||||||||||| ||||| |   ||  ||    
T  14086673 aaacagagtagtggaggtagcggttgtacacttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcattcaaatcacttcaaa 14086574  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaat-ccaatgaacagcctttgaagctttaagtctctcatcttctgatgaa 203  Q
     ||| |||||||||||| | |   ||||||||||| |||||||||| |  ||| ||| | |||||| |||||||| |||||  |  |||| |||||||||    
T  14086573 atagccgttgcttcacttttccagtcttctgcaatccttagacgaggttgaatcccattaaacagcttttgaagccttaag--ttgcatcctctgatgaa 14086476  T
Q  204 cttcagcttctggt 217  Q
    || |||||||||||    
T  14086475 ctgcagcttctggt 14086462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 9088972 - 9089032
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  9088972 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 9089032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29138544 - 29138480
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||||||| |||||||||||||| ||||||||||||||||||||  ||||| || ||||||||||    
T  29138544 acacaaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgacaacgctctt 29138480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 30742983 - 30743043
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || ||||||||||||||||||||  |||||||||||||||||||    
T  30742983 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt 30743043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 3245575 - 3245515
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||| |||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  3245575 aaacagagtactggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 3245515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 4887025 - 4887085
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || |||||||||||||||||||   |||||||||||||||||||    
T  4887025 aaacagagtagtggaggtagtggttgtacacttcgtacacacgtactttgtcaacgctctt 4887085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 6512342 - 6512266
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||| |||||||||| |||||||||||||| || ||||||||||| || | ||  |||||||||| ||||    
T  6512342 tgatgaacttgcttctgatgacgtcatcacttcaggaacatttctcttcagacgccttaagcttcctttttgttgat 6512266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 28464473 - 28464413
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||| |||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  28464473 aaacagagtagtagagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 28464413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 30115971 - 30115911
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| |||||||||| |||||||||  ||||| |||||||||||||    
T  30115971 aaacagagtagtggagatagtggttgtacatttcgtacaaacgtactatgtcaacgctctt 30115911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 28139610 - 28139669
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctct 64  Q
    |||| |||||||||||||| ||||||||||||||||||||   |||| ||||||||||||    
T  28139610 aaacagagtagtggagatagtggttgtacacttcgtacaaacatactatgtcaacgctct 28139669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 287
Target Start/End: Complemental strand, 14086443 - 14086406
Alignment:
Q  250 aacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||| |||||||||||||||||||||||||||||||    
T  14086443 aacttgcttctgatgacatcatcacttcaggagcactt 14086406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 287
Target Start/End: Original strand, 4887250 - 4887290
Alignment:
Q  247 atgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  4887250 atgaacttgcttctgatgacgtcatcacttcaggagcactt 4887290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 10848776 - 10848836
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||| ||||||  ||| | |||||||||||||    
T  10848776 aaacagagtagtggagatagtggttgtacactttgtacaaacgtattatgtcaacgctctt 10848836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 11208119 - 11208060
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || ||||| |||||||||||| || |||||||||||||||||||    
T  11208119 aaacagagtagtggaggtagtggttatacacttcgtac-atagtactttgtcaacgctctt 11208060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 21198904 - 21198840
Alignment:
Q  257 ttctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||| ||||| ||||||||||| |  ||||||||||||||||  |||||||||| ||||    
T  21198904 ttctgatgacgtcatcgcttcaggagcagtattcttcagatgcttcaagcttcctttttgttgat 21198840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 23391527 - 23391483
Alignment:
Q  243 tatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||||| |||||||||| |||||||||||| |||||||    
T  23391527 tatgatgaacttgcttctgatgacgtcatcacttcagaagcactt 23391483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 25930290 - 25930230
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||| |||||| |||||||||| |||||||||  ||||| |||||||||||||    
T  25930290 aaacagagtagtagagatagtggttgtacaattcgtacaaacgtactatgtcaacgctctt 25930230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 33933270 - 33933330
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || ||||||||||||||||||||  ||||| | |||||||||||    
T  33933270 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactatatcaacgctctt 33933330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 284
Target Start/End: Original strand, 28139813 - 28139852
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagca 284  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  28139813 tgatgaacttggttctgatgacgtcatcacttcaggagca 28139852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 30115787 - 30115744
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcacttc 288  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||    
T  30115787 tgatgaacttgcttctaatgacgtcatcacttcaggagcacttc 30115744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 28464260 - 28464218
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||| |||||| |||||||||| ||||||||||||||||||||    
T  28464260 tgataaacttgcttctgatgacgtcatcacttcaggagcactt 28464218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 29138304 - 29138262
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| |||||||| |||||||||||    
T  29138304 tgatgaacttgcttctgatgacgtcatcactacaggagcactt 29138262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 7745513 - 7745465
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||| ||||||||||||||||||| |||||||  |||||||||| ||||    
T  7745513 actttaggagcacttctcttcagacgcttcaagcttcctttttgttgat 7745465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 301
Target Start/End: Original strand, 9089182 - 9089226
Alignment:
Q  257 ttctgatgacatcatcacttcaggagcacttctcttcagatgctt 301  Q
    |||||||||| ||||||||||||||||| || |||||||| ||||    
T  9089182 ttctgatgacgtcatcacttcaggagcagttttcttcagacgctt 9089226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 9398610 - 9398562
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||| |||||||||||||| |||||||||  |||||||||| ||||    
T  9398610 acttcagcagcacttctcttcaaatgcttcaagcttcctttttgttgat 9398562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 10848988 - 10849032
Alignment:
Q  243 tatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||||| || ||||||  ||||||||||||||||||||    
T  10848988 tatgatgaacttgcttttgatgatgtcatcacttcaggagcactt 10849032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 15516972 - 15517032
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || ||||||||||||||||||||  ||||| || |||| |||||    
T  15516972 aaacagagtagtggaggtagtggttgtacacttcgtacaaaagtactatgccaacactctt 15517032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 15517095 - 15517184
Alignment:
Q  129 tcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgat 220  Q
    |||||||||||  ||||||||| |  |||||  |||||| | |||||||||||||||  |  ||||||||||||||| || |||||||||||    
T  15517095 tcttctgcaatctttagacgagtttgaatccgttgaacaacttttgaagctttaagttgc--atcttctgatgaactacaacttctggtgat 15517184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 32160769 - 32160829
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || |||| ||||||||||||||   || ||||||||||||||||    
T  32160769 aaacagagtagtggaggtagtggtcgtacacttcgtacatacgttctttgtcaacgctctt 32160829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 35932140 - 35932080
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||  || ||||||||||||||||||||  ||||| ||||||| |||||    
T  35932140 aaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacactctt 35932080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 1e-78; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 23284567 - 23284852
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||| | | ||    
T  23284567 acacaaactgagtagtggagataatggttatacacttcgtacaattgtactttgtcaacgctcttcaaggaa-caagcattcaatgccttcaaatccttt 23284665  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || ||| |||||||||||| | ||| |||||||||||||||||||||||| ||||||| |||||| | |||||||||||||||||  ||||| |||||    
T  23284666 caaaataggcgttgcttcacttttctggtcttctgcaatgcttagacgagattaaatccattgaacaacatttgaagctttaagtcttgcatctcctgat 23284765  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||||||||| | |||||| || |||||||||||||| | | ||||||||| ||||||||||||||||||||||| |||||||    
T  23284766 gaacttcagcttctagcgatcttctgcttctgatgagatgcttctaatgaacttgcttctgatgacatcatcacttcagaagcactt 23284852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 287
Target Start/End: Original strand, 13435544 - 13435820
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||| |||       ||| ||| |||||| ||||| | | ||  || ||||    
T  13435544 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgcttttcaaagaa-caatcattcaatgctttcaaatcctttcaaaatagt 13435642  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
    |||||||||||||| |  ||||||||||||||||| ||||||| ||||||| |||| | |||||||||||||||||||  ||||| ||||||||||||||    
T  13435643 cgttgcttcactcttccaatcttctgcaatgcttaaacgagattaaatccattgaaaatcctttgaagctttaagtcttgcatctcctgatgaacttcag 13435742  T
Q  210 cttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||| |||||||||| || |||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||||    
T  13435743 cttatggtgatcttctgcttctgatgagatgcttttgatgaacttgcttctgatgacgtcatcacttcaggagcactt 13435820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 13602175 - 13602467
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||| |||||        ||||||||||||||||||| ||||||    
T  13602175 acacaaactgagtagtggagatagtggttatacacttcttacaattgtattttgtcaacgttcttcaaagaat-aagcatccaatgccttcaa-ttcatt 13602272  T
Q  101 tgaat-tagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctga 199  Q
    | ||  |||| ||||||||||||| |   ||||||||||||||||||| |||| ||||||| |||||| |||||||||||||||||||  ||||| ||||    
T  13602273 tcaaaatagtggttgcttcactcttccagtcttctgcaatgcttagacaagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctga 13602372  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttca 294  Q
    ||||||  ||||||| ||||||||  | || ||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  13602373 tgaactatagcttcttgtgatcttcggcttttgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttctcttca 13602467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 287
Target Start/End: Complemental strand, 15531761 - 15531485
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    ||||||||||| || ||||||||| |||||||||||||||||||||||||||||||        |||||||||||||||||||| | | ||  || ||      
T  15531761 gagtagtggaggtagtggttgtacgcttcgtacaattgtactttgtcaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaaataac 15531663  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
    ||||| || ||||| ||  |||||||||||||||||||||||| |||| || |||||| ||||| |||||||||||||  |||||||||||||||| ||     
T  15531662 cgttgttttactcttctagtcttctgcaatgcttagacgagattaaattcattgaacaacctttcaagctttaagtcttgcatcttctgatgaactacaa 15531563  T
Q  210 cttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||||||||| ||||||||||||||||| | ||||||||||| ||||||| |  |||||||||||||| |||||    
T  15531562 cttctggtgatcttatgattctgatgagatgcttctgatgaacttgcttctgattatgtcatcacttcaggatcactt 15531485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 15987236 - 15987437
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| | | ||    
T  15987236 acacaaactgagtaatggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatccaatgccttcaaatccctt 15987334  T
Q  101 tgaat-tagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctga 199  Q
    | ||  ||||| |||||||||||| ||| |||||||||||||||||||||||| ||||||| |||||| ||||||||||| |||||||||||||||||||    
T  15987335 ttaaaatagtcattgcttcactcttctggtcttctgcaatgcttagacgagattaaatccattgaacatcctttgaagctctaagtctctcatcttctga 15987434  T
Q  200 tga 202  Q
    |||    
T  15987435 tga 15987437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 24116831 - 24117116
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||       |||||||||||||| ||||| | | ||    
T  24116831 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttc-aaagaacaagcatccaatgctttcaaatccttt 24116929  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcc-tttgaagctttaagtctctcatcttctga 199  Q
      || ||  || | ||||||||  ||| |||| |||||||||| ||||||||  |||||| ||||||||| |||||||||||||||||  ||||||||||    
T  24116930 caaaataaccgctacttcactcctctggtcttttgcaatgcttggacgagattgaatccattgaacagccttttgaagctttaagtcttgcatcttctga 24117029  T
Q  200 tgaacttcagcttctggtgatcttttgattctga-tgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||| ||||||||||||  ||| |||| |  ||||||| | ||||||||||| |||||||||| ||||||||||||||||||||    
T  24117030 tgaacttcatcttctggtgatc--ttgcttctaaccgagatgcttctgatgaacttgtttctgatgacgtcatcacttcaggagcactt 24117116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 9717850 - 9718131
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||        |||||||| |||||||| || | | ||  ||    
T  9717850 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaagcatcaaatgcctttaaatcctttcaaa 9717948  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||| ||||||||||||| |   |||||| ||||| ||||||||||| ||||||| |||||| |||||||||||||||||||  ||||| |||||||||    
T  9717949 atagttgttgcttcactcttccagtcttctacaatgtttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaac 9718048  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |  ||||||| |||||||||   |||||||| ||||| |||||| |||||| |||||||||| ||||||||||| ||||||||    
T  9718049 tagagcttctagtgatctttaacttctgatgggatgcttatgataaacttgcttctgatgacgtcatcacttcaagagcactt 9718131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 11 - 287
Target Start/End: Original strand, 21625114 - 21625385
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||        ||||||| |||||||||||| | | ||| || ||| |    
T  21625114 agtagtggagatagtggttgtacacttcgtacaattgtactttgttaacgctctt-tgaagaacaagcatgcaatgccttcaaatgc-tttcaaatagcc 21625211  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagc 210  Q
    ||||||| ||||| |  ||||||||||||||||||||||||| ||||||| |||||| ||||||||||| |||||||  ||||| |||||||    || |    
T  21625212 gttgctttactcttccaatcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctgtaagtcttgcatctcctgatga--gacaac 21625309  T
Q  211 ttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||||||||  | |||||||||||||| |||||||||||||  ||||||| | ||||||||||||||||||||    
T  21625310 ttctggtgatcttcagcttctgatgagatgcttatgatgaacttgcctctgatg-cgtcatcacttcaggagcactt 21625385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 78 - 301
Target Start/End: Original strand, 25597558 - 25597781
Alignment:
Q  78 catccaatgccttcaacttcatttgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaag 177  Q
    |||||||||||||||| | | || ||| ||| ||| |||||||||| |   |||||| ||||||||||||||||| ||||||| |||||| |||||||||    
T  25597558 catccaatgccttcaaatcctttcgaaatagccgtcgcttcactcttccagtcttctacaatgcttagacgagattaaatccattgaacatcctttgaag 25597657  T
Q  178 ctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttc 277  Q
    ||||||||||  ||| | |||||||||| || ||||||||||||||  | || ||||||||||| | ||||||||||| ||| |||||| ||||||||||    
T  25597658 ctttaagtcttgcatgtcctgatgaactacaacttctggtgatcttcagcttatgatgagatgcttctgatgaacttgcttcagatgacgtcatcacttc 25597757  T
Q  278 aggagcacttctcttcagatgctt 301  Q
    ||||||||||||||||||||||||    
T  25597758 aggagcacttctcttcagatgctt 25597781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 20112846 - 20112614
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||       |||||||||||||| ||||| | | ||    
T  20112846 acacaaactgagtagtggagatagtggttgtacatttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatccaatgctttcaaatccttt 20112748  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcc-tttgaagctttaagtctctcatcttctga 199  Q
      || |||||||||||||| ||| | | |||||||||||||||||| ||||| ||||||| |||||| || ||| |||||||||||||  |||||  |||    
T  20112747 caaaatagtcgttgcttcattcttccggtcttctgcaatgcttagaagagattaaatccattgaacaacctttttaagctttaagtcttgcatctcttga 20112648  T
Q  200 tgaacttcagcttctggtgatcttttgattctga 233  Q
    |||||||||||||| |||||||||| | ||||||    
T  20112647 tgaacttcagcttcaggtgatctttagcttctga 20112614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 12715566 - 12715344
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||        | |||| |||||| ||||| | ||||    
T  12715566 acacaaactgagtagtggagatagtggttctacacttcgtacaattgtactttgtcaacgctcttcaaagaat-aggcatacaatgctttcaaat-catt 12715469  T
Q  101 tgaat-tagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcc-tttgaagctttaagtctctcatcttctg 198  Q
    | ||  ||||||||||||||||||    ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||  ||||| |||    
T  12715468 tcaaaatagtcgttgcttcactctttcaatcttctgcaatgcttagacgagattaaatccattgaacagccttttgaagctttaagtcttgcatctcctg 12715369  T
Q  199 atgaacttcagcttctggtgatctt 223  Q
    ||||||| || ||||| ||||||||    
T  12715368 atgaactacaacttctagtgatctt 12715344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 19086161 - 19086372
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||       |||||||||||||| |||||           
T  19086161 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaa-caagcatccaatgctttcaa------- 19086252  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaa-cagcctttgaagctttaagtctctcatcttctga 199  Q
       | ||||||||||||||||||||   ||||||||||| |||||||||||| ||||||| |||| ||||| ||| ||||||||||||  ||||| ||||    
T  19086253 ---aatagtcgttgcttcactctcccagtcttctgcaatacttagacgagattaaatccattgaatcagcccttg-agctttaagtcttgcatctcctga 19086348  T
Q  200 tgaacttcagcttctggtgatctt 223  Q
    ||||||||||||||||||||||||    
T  19086349 tgaacttcagcttctggtgatctt 19086372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 11 - 287
Target Start/End: Original strand, 19470683 - 19470955
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    |||||||||| || |||||||| ||||||||||||||| |||| || ||||||| |       |||||||||||||||||||| | | ||||||||||||    
T  19470683 agtagtggaggtagtggttgtaaacttcgtacaattgtcctttttccacgctctgcaaagaa-caagcatccaatgccttcaaatccttttgaattagtc 19470781  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagc 210  Q
    ||||||||| ||| ||| |||| |||||||| ||| || ||| |||||   |||||| |||||||||||| |  ||||||||||| |||||| ||||| |    
T  19470782 gttgcttcattcttctggtcttgtgcaatgc-taggcgtgattaaatctgttgaacaacctttgaagcttcagttctctcatcttttgatgatcttcaac 19470880  T
Q  211 ttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||| ||||  | ||| |||||||||| ||| | ||||||||||| |||||||||| ||||||||| ||||||||||    
T  19470881 ttcttgtga--tgttgcttctgatgaggtgcttctgatgaacttgcttctgatgacgtcatcactttaggagcactt 19470955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 19623982 - 19624228
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactt-tgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcat 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||  ||| |||||||| |       ||| |||||||||| ||||| | | |    
T  19623982 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactagtgt-aacgctct-ccaaagaacaatcatccaatgctttcaaatcctt 19624079  T
Q  100 ttgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctga 199  Q
    |   | |||||||||||||||||  ||| |||| |||||||||| ||||||||  |||||| |||||| |||||||||||||||| ||  ||||| ||||    
T  19624080 tcagaatagtcgttgcttcactcctctggtcttttgcaatgcttggacgagattgaatccattgaacaacctttgaagctttaagacttgcatctcctga 19624179  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatga 250  Q
    ||||||||||||||||||||||  ||| |||||||||||||| | ||||||    
T  19624180 tgaacttcagcttctggtgatc--ttgtttctgatgagatgcttctgatga 19624228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 215
Target Start/End: Original strand, 29918024 - 29918232
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||        ||||||||  |||||||||| |   ||  ||    
T  29918024 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaagcatctgatgccttcaaatcttttcaaa 29918122  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||||||||||||||| | |  ||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||  ||||| |||||||||    
T  29918123 ctagtcgttgcttcacttttccaatcttctgcaatgcttagacgagattaaatcc-atgaacaacctttgaagctttaagtcttgcatctcctgatgaac 29918221  T
Q  205 ttcagcttctg 215  Q
    | |||||||||    
T  29918222 tacagcttctg 29918232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 32544272 - 32544486
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||         || ||||||||||||| || | | ||  ||    
T  32544272 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataaa-catccaatgcctttaaatcctttcaaa 32544370  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     ||| |||||||||||||| |   |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||||| |||||||||    
T  32544371 atagacgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaac 32544470  T
Q  205 ttcagcttctggtgat 220  Q
    |  ||||| |||||||    
T  32544471 tagagcttatggtgat 32544486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 10640555 - 10640364
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgt-caacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    |||||||||| || |||||||||||||||||||||||| |||| | |||||||||||       |||||||| ||||||||||| | | |||||||||||    
T  10640555 agtagtggaggtagtggttgtacacttcgtacaattgtccttttttcaacgctcttcaaagaa-caagcatctaatgccttcaaatccttttgaattagt 10640457  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaa 203  Q
    |||||||||||||| ||| ||||||||||||| ||| || ||| ||||||  |||||| ||||||||||||||| ||||||| |||||||||||    
T  10640456 cgttgcttcactcttctggtcttctgcaatgc-taggcgtgattaaatcctttgaacaacctttgaagctttaattctctcagcttctgatgaa 10640364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 7 - 284
Target Start/End: Complemental strand, 26972366 - 26972091
Alignment:
Q  7 actgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaatt 106  Q
    |||||||||||||| || |||||||||||||||  ||||||||||||||||||||||||        ||| ||||||||||||| || | | ||  || |    
T  26972366 actgagtagtggaggtagtggttgtacacttcg--caattgtactttgtcaacgctctt-tgaagaacaaacatccaatgcctttaaatcctttcaaaat 26972270  T
Q  107 agtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaactt 206  Q
    ||| ||||||||||||| |   |||||||||||||||||||||||| ||||||| |||||| | |||||||||||||||||  ||||| |||||||| |     
T  26972269 agttgttgcttcactcttcaagtcttctgcaatgcttagacgagattaaatccattgaacaacatttgaagctttaagtcttgcatctcctgatgaaata 26972170  T
Q  207 cagcttctggtgatcttttgattctgatg-agatgcctatgatgaacttgattctgatgacatcatcacttcaggagca 284  Q
     ||||||||||||| || || |||||||| |  ||| | | || |||||| |||||||||| ||| || ||||||||||    
T  26972169 gagcttctggtgattttctgcttctgatgaacttgcttctaataaacttgcttctgatgacgtcaccatttcaggagca 26972091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 14100582 - 14100373
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||| |||||||||||||||||||||||         ||||||||||||||||||| | | ||  ||    
T  14100582 aaacagagtagtggaggtagtggttgtacacttcgtataattgtactttgtcaacgctctttaaagaag-aagcatccaatgccttcaaatcctttcaaa 14100484  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||| ||| ||||||||| |   |||||| ||||||||||| ||||| ||||||| |||||| |||||||| ||||||||||  ||||| |||||||||    
T  14100483 atagttgtttcttcactcttccagtcttctacaatgcttagatgagattaaatccattgaacatcctttgaaactttaagtcttgcatctcctgatgaac 14100384  T
Q  205 ttcagcttctg 215  Q
    |||||||||||    
T  14100383 ttcagcttctg 14100373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 15302203 - 15302424
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||| |||||||||||||||||| ||||||||||||| ||||||||||||  ||||||||||||||       ||||||||||||||||| || | | ||    
T  15302203 acactaactgagtagtggagatagtggttgtacactttgtacaattgtacaatgtcaacgctcttcaaagaa-caagcatccaatgcctttaaatccttt 15302301  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || ||| |||||||||||| | |   |||||||||||| ||||||||||| ||||||| |||||| ||||||| |||||||||||  ||||| || ||    
T  15302302 caaaatagccgttgcttcacttttccagtcttctgcaatgtttagacgagattaaatccattgaacaacctttgacgctttaagtcttgcatctcctaat 15302401  T
Q  201 gaacttcagcttctggtgatctt 223  Q
    || ||| ||||| ||||||||||    
T  15302402 gagctttagcttttggtgatctt 15302424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 18378317 - 18378496
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||       || ||||||||||||||||| | | ||    
T  18378317 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttatcaacgctcttc-aaagaacatgcatccaatgccttcaaatccttt 18378415  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagcttt 181  Q
      || |||| ||||||| ||||| |   |||| |||||| ||||||||||||  |||||| |||||| || ||||||||||    
T  18378416 caaaatagttgttgcttgactcttccagtcttttgcaatacttagacgagatttaatccattgaacaaccgttgaagcttt 18378496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 304
Target Start/End: Original strand, 26943583 - 26943867
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||  || |||||||||||||||||||||||||||| | |||||||||||       |||||||||||||||||| | | |  |||||    
T  26943583 aaacagagtagtggaagtagtggttgtacacttcgtacaattgtacttcgccaacgctcttcaaagaa-caagcatccaatgccttctaatcctattgaa 26943681  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||  ||||||||||||| ||  |||||||||||||| ||||  ||| ||||||           ||||||| | ||| ||||||||| |||||||| |    
T  26943682 atagcggttgcttcactcttctagtcttctgcaatgct-agacatgattaaatcc-----------tttgaagttataattctctcatcatctgatgatc 26943769  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgcttcaa 304  Q
    |||||||| | ||||| ||  | |||| ||||| ||| | ||| ||||||| |||||||||| ||||||||||||||||||||  |||||||||||||||    
T  26943770 ttcagcttttagtgatgtt--gcttctaatgaggtgcttctgacgaacttgcttctgatgacgtcatcacttcaggagcactttccttcagatgcttcaa 26943867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 236
Target Start/End: Original strand, 18435574 - 18435793
Alignment:
Q  16 tggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgttgc 115  Q
    ||||| || ||||||||||||| ||||| |||||||||||||||||||||        |||||||||||||||||||| | | ||  || ||||||||||    
T  18435574 tggaggtagtggttgtacactttgtacacttgtactttgtcaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgc 18435672  T
Q  116 ttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctg 215  Q
    |||||| | ||  |||| || ||| |||||||||||| ||||||| |||| | ||||  |||||||||||||  ||||| ||||||||||  |||||||     
T  18435673 ttcacttttctagtcttttgaaattcttagacgagattaaatccattgaataaccttcaaagctttaagtcttgcatctcctgatgaactagagcttcta 18435772  T
Q  216 gtgatcttttgattctgatga 236  Q
    ||||||||  | |||||||||    
T  18435773 gtgatcttcagcttctgatga 18435793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 215
Target Start/End: Original strand, 19688793 - 19688980
Alignment:
Q  25 tggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctc 124  Q
    ||||| |||||||||||||||||||||||||||||||||||        ||| |||||||||||||||| | | ||  || ||||| ||||||||||||     
T  19688793 tggttatacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaaacatccaatgccttcaaatcctttcaaaatagtccttgcttcactctt 19688891  T
Q  125 ctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctg 215  Q
    |   | |||| |||||||| |||||||  ||||||| |||||| ||||||||||||||||  || ||||| ||||||||||||||||||||    
T  19688892 ccagttttctacaatgcttggacgagaataaatccattgaacaacctttgaagctttaag--tcgcatctcctgatgaacttcagcttctg 19688980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 181
Target Start/End: Complemental strand, 20730846 - 20730671
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||| ||||||| || ||||||||||||| |||||||||||||||||||||||||||        ||| |||||||||||||||| | | ||  ||    
T  20730846 aaacagagcagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctt-tgaagaacaaacatccaatgccttcaaatcctttcaaa 20730748  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagcttt 181  Q
     |||||||||||||||| | |   ||||||||||| |||||| ||||| ||||||  ||||||||||||||||||||    
T  20730747 ctagtcgttgcttcacttttccagtcttctgcaatacttagatgagattaaatcccttgaacagcctttgaagcttt 20730671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 22802153 - 22802360
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    ||||||||||| || ||||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||| || ||| ||  || | ||    
T  22802153 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgttaacgctctt-tgaagaacaagcatccaatgcctttaaattctttcaaacttgt 22802251  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
    ||||| |||||| | |   || |||||||||||||||| | || ||||||| |||||| ||||||||||||||  | |  ||||| |||||||||| ||     
T  22802252 cgttgtttcacttttccagtcgtctgcaatgcttagacaatattaaatccattgaacaacctttgaagcttta--tgttgcatctcctgatgaactacaa 22802349  T
Q  210 cttctggtgat 220  Q
    |||||||||||    
T  22802350 cttctggtgat 22802360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 34451787 - 34451595
Alignment:
Q  28 ttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctcctg 127  Q
    |||||||||| |||||||||||||||||||||||| |||        | |||| |||||| ||||| | |  |  |||||||||||||||||||||        
T  34451787 ttgtacactttgtacaattgtactttgtcaacgcttttcaaagaat-aggcatacaatgctttcaaatcctctcaaattagtcgttgcttcactctttca 34451689  T
Q  128 atcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgatc 221  Q
     ||||||||||||||||||||| |   |||||| ||||||||||||||| ||||||||||  ||||| ||||||||||  ||||||||||||||    
T  34451688 gtcttctgcaatgcttagacgatactgaatccattgaacagcctttgaatctttaagtcttgcatctcctgatgaactagagcttctggtgatc 34451595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25594071 - 25594136
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttc 66  Q
    |||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||| ||||    
T  25594071 acacaaactgagtagtggaggtagtggttgtacatttcgtacaattgtactttgtcaacgcgcttc 25594136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 16265296 - 16265116
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||| ||||||||||| || |||||| |||||||||||||||||||||| |||||||||||        |||||||||||||| |||||   | ||    
T  16265296 acacaaacagagtagtggaggtagtggttgcacacttcgtacaattgtactttctcaacgctctt-tgaagaacaagcatccaatgcattcaa-aacctt 16265199  T
Q  101 tgaat-tagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagcttta 182  Q
    | ||| || ||||||||||||| | |   || | ||||||||||||| ||||| ||||||| |||||| ||||| ||||||||    
T  16265198 tcaatctactcgttgcttcacttttccagtcctgtgcaatgcttagatgagattaaatccattgaacaacctttcaagcttta 16265116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 217
Target Start/End: Original strand, 15954710 - 15954919
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||  |||||||||||||||||||        ||||||| |||||||||||| | | ||  ||    
T  15954710 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt-tgaataacaagcattcaatgccttcaaatcctttcaaa 15954808  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
    ||||||||||||||| | | |   |||||||||||  ||||| ||| |  |||||  | |||||| ||||||||||||||  |  |||||  ||||||||    
T  15954809 ttagtcgttgcttcatttttccagtcttctgcaatctttagaagagtttgaatccgttaaacagcttttgaagctttaag--ttgcatctcttgatgaac 15954906  T
Q  205 ttcagcttctggt 217  Q
    | |||||||||||    
T  15954907 tacagcttctggt 15954919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 19688979 - 19689055
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||| |||||| ||| |||||||||||||||||| |||||||||| |||||||  |||||||||| ||||    
T  19688979 tgatgaacttgcttctgacgacgtcatcacttcaggagcacatctcttcagacgcttcaaacttcctttttgttgat 19689055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 22076549 - 22076489
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| |||||||||||||||||||| |||||| |||||||||||||    
T  22076549 aaacagagtagtggagatagtggttgtacacttcgtacaaatgtactatgtcaacgctctt 22076489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 21235137 - 21235192
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    ||||||||||| || |||||||||||||| ||||||||||||||||||||||||||    
T  21235137 gagtagtggaggtagtggttgtacacttcatacaattgtactttgtcaacgctctt 21235192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 12423268 - 12423328
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  12423268 aaacagagtagtggagatagtggttgtacacttcgtacaaaggtactatgtcaacgctctt 12423328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 15987469 - 15987533
Alignment:
Q  257 ttctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||||||  |||||||||| ||||    
T  15987469 ttctgatgacgtcatcacgtcaggagcacttttcttcagatgcttcaagcttcctttttgttgat 15987533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 16336134 - 16336194
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||| ||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  16336134 aaacagagtagtgtagatagtggttgtacacttcgtacaatcgtactatgtcaacgctctt 16336194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 16877220 - 16877280
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || ||||||||||||||||||||  |||||||||||||||||||    
T  16877220 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt 16877280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 19833175 - 19832962
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || || |||||||||||||||||  ||||| |||||||||||||        |||||||||||||| ||||| | | ||  ||    
T  19833175 aaacagagtagtggaggtagtgcttgtacacttcgtacaaacgtactatgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaa 19833076  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||||||||||||||| | |   |||||||||||  ||||| ||| |  |||||  | |||||| ||| ||||||||||  |  ||||| |||||||||    
T  19833075 atagtcgttgcttcacttttccagtcttctgcaatctttagatgagtttgaatccgttaaacagcttttaaagctttaag--ttgcatctcctgatgaac 19832978  T
Q  205 ttcagcttctggtgat 220  Q
    | || |||||||||||    
T  19832977 tacatcttctggtgat 19832962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 10640353 - 10640288
Alignment:
Q  231 tgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcaga 296  Q
    ||||||| ||| | ||||||||||| |||||||||| ||||||||||||||||||||  |||||||    
T  10640353 tgatgaggtgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttgacttcaga 10640288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 12349000 - 12349060
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||| ||||||  ||||| |||||||||||||    
T  12349000 aaacagagtagtggagatagtggttgtacactttgtacaaacgtactatgtcaacgctctt 12349060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 18378528 - 18378592
Alignment:
Q  257 ttctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||||||||||||||||||| ||| | || ||  |||||||||| ||||    
T  18378528 ttctgatgacatcatcacttcaggagcacttctcttaagacgttttaagcttcctttttgttgat 18378592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 19624253 - 19624301
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  19624253 acttcaggagcacttctcttcagatgcttcaagcttcctttttgttgat 19624301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 20488060 - 20488000
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || |||||||| |||||||||||  |||||||||||||||||||    
T  20488060 aaacagagtagtggaggtagtggttgtaaacttcgtacaaacgtactttgtcaacgctctt 20488000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 21618251 - 21618311
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || ||||||||||||||||||||  ||||| |||||||||||||    
T  21618251 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 21618311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 33352068 - 33352008
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| || |||||||||||||||||  ||||| |||||||||||||    
T  33352068 aaacagagtagtggagatagtgattgtacacttcgtacaaacgtactatgtcaacgctctt 33352008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 12715292 - 12715245
Alignment:
Q  274 cttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||    
T  12715292 cttcaggagcacttctcttcagatgcttcaagcttcctttttgttgat 12715245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 21235248 - 21235332
Alignment:
Q  134 tgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgat 220  Q
    ||||||||||||||||||| ||||||| |||||| ||||| ||||||||  | |  ||||| |||||||||| |||||||| |||||    
T  21235248 tgcaatgcttagacgagattaaatccattgaacaacctttaaagcttta--tgttgcatctcctgatgaactgcagcttctagtgat 21235332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 19086379 - 19086421
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  19086379 tgatgaacttgcttctgatgacgtcatcacttcaggagcactt 19086421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 33351848 - 33351806
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||||||||||||||| ||||||||    
T  33351848 tgatgaacttgcttctgatgacatcatcacttcaagagcactt 33351806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 17381536 - 17381588
Alignment:
Q  13 tagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||||||| || || |||||||||||||||||  |||||||||||||||||||    
T  17381536 tagtggaggtagtgattgtacacttcgtacaaacgtactttgtcaacgctctt 17381588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 19086441 - 19086489
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||||||| |||||||  |||||||||| ||||    
T  19086441 acttcaggagcacttctcttcagacgcttcaagcttcctttttgttgat 19086489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 23284854 - 23284902
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||||||||| |||||  |||||||||| ||||    
T  23284854 acttcaggagcacttctcttcagatgtttcaagcttcctttttgttgat 23284902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 24117119 - 24117167
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||||||||||||||||| ||  |||||||||| ||||    
T  24117119 acttcaggagcacttctcttcagatgctttaagcttcctttttgttgat 24117167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 13435828 - 13435871
Alignment:
Q  278 aggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||||||||||  |||||||||| ||||    
T  13435828 aggagcacttctcttcagatgcttcaagcttcctttttgttgat 13435871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 34451541 - 34451494
Alignment:
Q  274 cttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||| ||||||||||||||||||||  |||||||||| ||||    
T  34451541 cttcaggagcgcttctcttcagatgcttcaagcttcctttttgctgat 34451494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 17381659 - 17381701
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||    
T  17381659 tgatgaacttgcttctgatgacgtcaccacttcaggagcactt 17381701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 19065946 - 19065904
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| |||||||||||| |||||||    
T  19065946 tgatgaacttgcttctgatgacgtcatcacttcagaagcactt 19065904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 19482759 - 19482817
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctc 63  Q
    |||| |||||||| ||||| ||||||||||||||||||||  | ||| |||||||||||    
T  19482759 aaacagagtagtgcagatagtggttgtacacttcgtacaaacgcactatgtcaacgctc 19482817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 19832921 - 19832879
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||| |||| |||||||||| ||||||||||||||||||||    
T  19832921 tgatgaccttgcttctgatgacgtcatcacttcaggagcactt 19832879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 32544497 - 32544539
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||||||  ||||||||||||| ||||||||||||||||    
T  32544497 tgatgaacttgcatctgatgacatcaccacttcaggagcactt 32544539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Original strand, 16336384 - 16336425
Alignment:
Q  246 gatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||| |||| |||||||||| ||||||||||||||||||||    
T  16336384 gatgaccttgcttctgatgacgtcatcacttcaggagcactt 16336425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 14100331 - 14100283
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||| |||||||| ||||||||||||  |||||||||| ||||    
T  14100331 acttcaggagtacttctctccagatgcttcaagcttcctttttgttgat 14100283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 17316661 - 17316609
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctc 63  Q
    ||||||| ||||| ||||||||||||||||||||  | ||| |||||||||||    
T  17316661 agtagtgcagatagtggttgtacacttcgtacaaacgcactatgtcaacgctc 17316609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 19066160 - 19066100
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||  || ||||||||||||||||||||   |||| |||||||||||||    
T  19066160 aaacagagtagtggaagtagtggttgtacacttcgtacaaacatactatgtcaacgctctt 19066100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 20112572 - 20112524
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||| ||||||||||||||| |||||||||||  |||||||||| ||||    
T  20112572 actttaggagcacttctctttagatgcttcaagcttcctttttgttgat 20112524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 20730625 - 20730581
Alignment:
Q  243 tatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||||| |||||||||| |||  |||||||||||||||    
T  20730625 tatgatgaacttgcttctgatgacgtcactacttcaggagcactt 20730581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 22058448 - 22058412
Alignment:
Q  265 acatcatcacttcaggagcacttctcttcagatgctt 301  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  22058448 acatcatcacttcaggagcaattctcttcagacgctt 22058412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 34451586 - 34451546
Alignment:
Q  247 atgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||| |||||||||| |||||||||||| |||||||    
T  34451586 atgaacttgcttctgatgacgtcatcacttcagaagcactt 34451546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 4e-78; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 49642919 - 49642600
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||        ||| |||||||||||||||| | | ||    
T  49642919 acacaaactgagtagtggagatagtggttgtacactttgtacaattgtactttgtcaacgctctt-aaaagaacaatcatccaatgccttcaaatccttt 49642821  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||||| |   |||||||||||||||||||||||| ||||| | |||||| |||||||||||||||||||  ||||| |||||    
T  49642820 caaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatctattgaacaacctttgaagctttaagtcttgcatctcctgat 49642721  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgct 300  Q
    ||||| || ||||||||||||||  | |||| ||||||||| | |||||| |||| |||||||  | |||||||||||||||||||||||||||||||||    
T  49642720 gaactacaacttctggtgatcttcagcttctaatgagatgcttctgatgaccttgcttctgattgcgtcatcacttcaggagcacttctcttcagatgct 49642621  T
Q  301 tcaattttcctttttgatgat 321  Q
    ||||  |||||||||| ||||    
T  49642620 tcaagcttcctttttgttgat 49642600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 14393161 - 14392878
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||| | | ||    
T  14393161 acacaaactaagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatccaatgctttcaaatccttt 14393063  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || ||||||||| |||||||| ||| |||||||||||||||||||||||| ||||||| |||||| |||||||| ||||||||||   |||| || ||    
T  14393062 caaaatagtcgttgtttcactcttctggtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaaactttaagtcttgtatctcctaat 14392963  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||||||||| ||||||  ||| || ||||||||||| |||||||| |||| |||||||||| ||||||||||||||||||||    
T  14392962 gaacttcagcttctagtgatc--ttgcttttgatgagatgcttatgatgatcttgcttctgatgacgtcatcacttcaggagcactt 14392878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 4 - 287
Target Start/End: Complemental strand, 29951592 - 29951310
Alignment:
Q  4 caaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttga 103  Q
    |||||||||| ||||||||| ||||||||||||| ||||||||||||||||| ||| ||||||       |||||||||||||||||||| | | ||  |    
T  29951592 caaactgagtggtggagatagtggttgtacactttgtacaattgtactttgttaactctcttcaaagaa-caagcatccaatgccttcaaatcctttcaa 29951494  T
Q  104 attagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaa 203  Q
    | |||| ||||||||||||  ||| |||||| ||||||||||||||||| ||||||| |||| | |||||||||||||||||||||| ||||||||||||    
T  29951493 aatagttgttgcttcactcctctggtcttctacaatgcttagacgagattaaatccattgaaaaacctttgaagctttaagtctctcgtcttctgatgaa 29951394  T
Q  204 cttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| ||||||||  | ||||||| || ||| | ||||||||||| |||||| ||| ||||||||||||||||||||    
T  29951393 cttcagcttctagtgatcttcagcttctgataaggtgcttctgatgaacttgcttctgaagacgtcatcacttcaggagcactt 29951310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 4 - 287
Target Start/End: Complemental strand, 30000746 - 30000464
Alignment:
Q  4 caaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttga 103  Q
    |||||||||| ||||||||| ||||||||||||| ||||||||||||||||| ||| ||||||       |||||||||||||||||||| | | ||  |    
T  30000746 caaactgagtggtggagatagtggttgtacactttgtacaattgtactttgttaactctcttcaaagaa-caagcatccaatgccttcaaatcctttcaa 30000648  T
Q  104 attagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaa 203  Q
    | |||| ||||||||||||  ||| |||||| ||||||||||||||||| ||||||| |||| | |||||||||||||||||||||| ||||||||||||    
T  30000647 aatagttgttgcttcactcctctggtcttctacaatgcttagacgagattaaatccattgaaaaacctttgaagctttaagtctctcgtcttctgatgaa 30000548  T
Q  204 cttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| ||||||||  | ||||||| || ||| | ||||||||||| |||||| ||| ||||||||||||||||||||    
T  30000547 cttcagcttctagtgatcttcagcttctgataaggtgcttctgatgaacttgcttctgaagacgtcatcacttcaggagcactt 30000464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 52920419 - 52920692
Alignment:
Q  12 gtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcg 111  Q
    ||||| ||| || |||||||| ||||||||||||| || |||||||||||||||        |||||||| ||||||||||| | | ||| ||||||| |    
T  52920419 gtagtagaggtagtggttgtatacttcgtacaattttaatttgtcaacgctctt-taaagaacaagcatcaaatgccttcaaatac-tttaaattagttg 52920516  T
Q  112 ttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagct 211  Q
    |||||||||||| ||  |||||||||||||||||||||||| ||||||| ||| ||||||||||| ||||||||||  ||||| ||||||||||||||||    
T  52920517 ttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattgagcagcctttgaaactttaagtcttgcatctcctgatgaacttcagct 52920616  T
Q  212 tctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||||  | |||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||||    
T  52920617 tctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 52920692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 6090738 - 6091019
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||||| ||| ||        ||||||| |||||||||||| | | ||  ||    
T  6090738 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaaagctttt-taaagaacaagcattcaatgccttcaaatcctttcaaa 6090836  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
    ||||  ||||||||||||| ||  |||||||||||||||||||||||| ||||||| ||| || ||||||||| |||||||||  ||||| |||||||||    
T  6090837 ttagatgttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattgagcaacctttgaagttttaagtcttgcatctcctgatgaac 6090936  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||||||||||| || |||||||||||||| | ||||||||||| |||||||||| |||| |||||| ||||||||    
T  6090937 ttcagcttctggtgatcttctgcttctgatgagatgcttttgatgaacttgcttctgatgacgtcataacttcatgagcactt 6091019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 13948338 - 13948620
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||       |||||||||||||||||||| | | ||    
T  13948338 acacaacctgagtaatggagataatggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaa-caagcatccaatgccttcaaatccttt 13948436  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||| | |   |||||||||||||||||||||||| ||||| | |||||| ||||||| |||||||||||  ||||| |||||    
T  13948437 caaaatagtcgttgcttcactattccagtcttctgcaatgcttagacgagattaaatcaattgaacatcctttgacgctttaagtcttgcatctcctgat 13948536  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagca 284  Q
    || ||| ||||||||||||||||  | |||||||||||||| | |||| |||||| |||||||||| ||||||||||| |||||    
T  13948537 gagctttagcttctggtgatcttcagcttctgatgagatgcttctgataaacttgcttctgatgacgtcatcacttcatgagca 13948620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 15903200 - 15903486
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||        |||||| |||||| ||||| | | ||    
T  15903200 acacaaactgagtagtggagatagttgttgtacacttcgtacaattgtactttgtcaatgctcttcaaagaacaaagcatgcaatgctttcaaatccttt 15903299  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||||| ||  ||||||| ||||||||||||||||  |||||| |||||||| |||||||||||||||||  ||||| |||||    
T  15903300 caaaatagtcgttgcttcactcttctagtcttctgtaatgcttagacgagattgaatccattgaacagcgtttgaagctttaagtcttgcatctcctgat 15903399  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
     || | |||||| ||||||||||  | |||||||||||||  | ||||||||||| |||||||||| |||||||||||| |||||||    
T  15903400 aaattacagcttttggtgatcttcagcttctgatgagatggttctgatgaacttgcttctgatgacgtcatcacttcagaagcactt 15903486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 20646156 - 20646442
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||       |||||||||||||| ||||| | | ||    
T  20646156 acacaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaa-caagcatccaatgctttcaaatccttt 20646254  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaa-gctttaagtctctcatcttctga 199  Q
      || ||| |||||||||||||| ||| |||||| |||||||| |||||||| |||| || |||||||||||| || |||||||||||  ||||| ||||    
T  20646255 caaaatagacgttgcttcactcttctggtcttctacaatgcttggacgagatgaaatacattgaacagccttttaaagctttaagtcttgcatctcctga 20646354  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||| || ||||||||||||||  | |||||||||||||| | ||||||||||| |||||||||| ||||||||||| || |||||    
T  20646355 tgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcatgaacactt 20646442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 5 - 284
Target Start/End: Original strand, 20725093 - 20725368
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| |||||||||||||| |  ||||||||||||||||||||| |||| ||||||||||||       ||||||||||||| |||||| | | ||||||    
T  20725093 aaacagagtagtggagatagttattgtacacttcgtacaattgtcctttttcaacgctcttcaagaaa-caagcatccaatgtcttcaaatccttttgaa 20725191  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||| ||| | |||   |||||||||||||||||||||| ||||||| ||| |||||| |    
T  20725192 ttagtcgttgcttcactcttctggtcttctgcaatgc-tagacgtgattagatcttttgaacagcctttgaagctttaattctctcagcttatgatgatc 20725290  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagca 284  Q
    |||||||||||||||| |||   || ||||||| ||| ||||||||||||| |||||||||||||||||||||| |||||    
T  20725291 ttcagcttctggtgatgttt--cttttgatgaggtgcttatgatgaacttgcttctgatgacatcatcacttcaagagca 20725368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 28582112 - 28582394
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||        ||||||||||||||| | || | | ||  ||    
T  28582112 aaactgagtagtggaggtagtggttgtacacttcgtacaattgtattttgtcaacgctctt-tgaagaacaagcatccaatgccattaaatcctttcaaa 28582210  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||||||||||||||||| |  |||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||  ||||| ||||||||     
T  28582211 atagtcgttgcttcactcttccaatcttctgcaatgcatagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatctcctgatgaaa 28582310  T
Q  205 ttcagcttctggtgatcttttgattctgatg-agatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |  ||||||||||||| ||  | |||| ||| |  ||| | ||||||||||| |||||||||| ||| ||||||||||||||||    
T  28582311 tagagcttctggtgattttcagcttctaatgtacttgcttctgatgaacttgcttctgatgacgtcaccacttcaggagcactt 28582394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 31303388 - 31303676
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||       ||| |||| |||| |||||| | | ||    
T  31303388 acacaaactgagtagtggagatagttgttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caaacatcaaatgtcttcaaatccttt 31303486  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||| ||| |||||||||     |||||||||||||||||||||||| |||| || |||||| ||||| ||||||||||||| |||||| ||||     
T  31303487 caaaatagttgttccttcactctttcagtcttctgcaatgcttagacgagattaaattcattgaacaacctttaaagctttaagtctttcatctcctgag 31303586  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattc---tgatgacatcatcacttcaggagcactt 287  Q
     ||||  ||||||||||||||||  | |||||||||||||| | ||||||||||| |||   ||||||| ||||||||||||||||||||    
T  31303587 taactagagcttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgatgacgtcatcacttcaggagcactt 31303676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 223
Target Start/End: Complemental strand, 17239077 - 17238858
Alignment:
Q  3 acaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttg 102  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||       ||| |||||||||| ||||| | | ||      
T  17239077 acaaactaagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctattcaaagaa-caatcatccaatgctttcaaatcctttca 17238979  T
Q  103 aattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatga 202  Q
    || |||||| ||||||||||| ||| |||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||  ||||| || |||     
T  17238978 aaatagtcgatgcttcactcttctggtcttctgcaatgcttagacgagattaaatccattgatcagcctttgaagctttaagtcttgcatctccttatgc 17238879  T
Q  203 acttcagcttctggtgatctt 223  Q
    |||||| ||||||||||||||    
T  17238878 acttcatcttctggtgatctt 17238858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 321
Target Start/End: Complemental strand, 12389025 - 12388697
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||        |||||||||||||||| || ||| ||||||    
T  12389025 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtcctttgccaacgctcttcaaagaag-aagcatccaatgccttaaaattcttttgaa 12388927  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
    |||||||| |||||||| | ||||||||||||||| | |||||  ||| ||||||  |||||| ||||||||||||||||||||||||||||| |||| |    
T  12388926 ttagtcgtagcttcactgttctgatcttctgcaattc-tagacatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttcttatgatc 12388828  T
Q  205 ttcagcttctggtga---------tc------ttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttct 289  Q
    |||||||  || |||         ||      | ||| |||||||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||| |    
T  12388827 ttcagctcttgatgaaaaactgcttctagtgatgttgcttctgatgaggtgcttatgatgaacttgcttctgatgacgtcatcacttcaggagcactt-t 12388729  T
Q  290 cttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||  |||||| ||| ||||    
T  12388728 cttcagatgcttcaagcttccttcttgttgat 12388697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 41495001 - 41495179
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| | | ||    
T  41495001 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttc-aaagaacaagcatccaatgccttcaaatccttt 41495099  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctt 180  Q
      || |||||||||||||||||| |   |||||||||||| ||||||||||| ||||||| |||||||||||||||||||    
T  41495100 caaaatagtcgttgcttcactcttccagtcttctgcaatgtttagacgagattaaatccattgaacagcctttgaagctt 41495179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 37467335 - 37467556
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| | | ||    
T  37467335 acacaaactgggtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttc-aaagaacaagcatccaatgccttcaaatccttt 37467433  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||||| |   |||||| ||||||||||| ||||| ||||||| ||||||  |||||||| ||||||| |  ||||| |||||    
T  37467434 caaaatagtcgttgcttcactcttccagtcttctacaatgcttagatgagattaaatccattgaacaagctttgaagatttaagttttgcatctcctgat 37467533  T
Q  201 gaacttcagcttctggtgatctt 223  Q
    ||||| | |||||||||||||||    
T  37467534 gaactactgcttctggtgatctt 37467556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 10 - 236
Target Start/End: Complemental strand, 38177791 - 38177566
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| | | ||  || ||||    
T  38177791 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt-taaagaacaagcatccaatgccttcaaatcctttcaaaatagt 38177693  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
     ||||||||||||| |  |||||||||| |||| ||||||||| |||| || |||||| |||||||||||||||||||  ||||| || || ||||  ||    
T  38177692 tgttgcttcactcttccaatcttctgcattgctcagacgagattaaattcattgaacaacctttgaagctttaagtcttgcatctcctaataaactagag 38177593  T
Q  210 cttctggtgatcttttgattctgatga 236  Q
    |||||| ||||||| || |||||||||    
T  38177592 cttctgatgatcttctgcttctgatga 38177566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 12963242 - 12963021
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||       |||||||||||||| |||||   | |     
T  12963242 acacatactgagtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacactcttcaaagaa-caagcatccaatgctttcaaaaccttc 12963144  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    | || |||| |||||||||||||||   ||||||||| ||||||||| |||| ||||||  |||||| || ||||||||||||||||  ||||| |||||    
T  12963143 taaaatagttgttgcttcactctcccagtcttctgcattgcttagacaagattaaatcccttgaacaacccttgaagctttaagtcttgcatctcctgat 12963044  T
Q  201 gaacttcagcttctggtgatctt 223  Q
    ||||| || ||||||||||||||    
T  12963043 gaactacaacttctggtgatctt 12963021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 2561194 - 2561408
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||| |||||||||||||||| ||||        ||||||||||||  |||||| | | ||  ||    
T  2561194 aaacagagtagtggaggtagtggttgtacacttcgtacacttgtactttgtcaacgatctt-tgaagaacaagcatccaatttcttcaaatcctttcaaa 2561292  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||| ||||||||||||| |   |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||||| |||||||||    
T  2561293 atagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaac 2561392  T
Q  205 ttcagcttctggtgat 220  Q
    |  |||||||||||||    
T  2561393 tagagcttctggtgat 2561408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 10 - 223
Target Start/End: Complemental strand, 49553637 - 49553425
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||| |       ||| |||||||||||||||| | | ||  || ||||    
T  49553637 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctct-ctgaagaacaaacatccaatgccttcaaatcctttcaaaatagt 49553539  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
    |  |||||||||||    ||||||||||||||||||||||  | ||||| | | ||||||||||||| ||||||||||  ||||| |||||||||||| |    
T  49553538 cactgcttcactctttcaatcttctgcaatgcttagacgatgttaaatctattaaacagcctttgaaactttaagtcttgcatctcctgatgaacttcgg 49553439  T
Q  210 cttctggtgatctt 223  Q
    ||||||||||||||    
T  49553438 cttctggtgatctt 49553425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 16032531 - 16032743
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||||| |||||||       |||||||||||||||||||| | | ||  ||    
T  16032531 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaatgctcttc-aaagaacaagcatccaatgccttcaaatcctttcaaa 16032629  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     ||||||||| | |||||||||| ||||||||| ||  ||| |  ||| ||||||  |||||| ||||||||||||||||||||||||||||||||| ||    
T  16032630 atagtcgttgatacactctcctggtcttctgcagtg-ataggcatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatg-ac 16032727  T
Q  205 ttcagcttctggtgat 220  Q
    |||| |||| ||||||    
T  16032728 ttcaacttcgggtgat 16032743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 287
Target Start/End: Complemental strand, 18121770 - 18121493
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    ||||||||||| || ||||||||||||||||||||||||||||||| |||||||||         |||||| ||||||||| || | | ||  || ||||    
T  18121770 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtaaacgctctttgaagaaa-aagcattcaatgcctttaaatcctttcaaaatagt 18121672  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
     ||||||||||||| |   |||||||||||||| | |||||||  |||||| |||||| ||||||||||||||| |||  ||||| ||||||||||  ||    
T  18121671 tgttgcttcactcttccagtcttctgcaatgctcaaacgagattgaatccattgaacaacctttgaagctttaaatcttgcatctcctgatgaactagag 18121572  T
Q  210 cttctggtgatcttttgattctgatg-agatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||||||| | || ||||| |  ||| | ||||||||||| |||||||||  ||| ||| ||||||||||||    
T  18121571 cttctggtgatctttagcttatgatgaacttgcttttgatgaacttgcttctgatgatgtcaccacgtcaggagcactt 18121493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 13780741 - 13780576
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| | | ||    
T  13780741 acacaaactgagtcgtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttc-aaataacaagcatccaatgccttcaaatccttt 13780643  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaaca 167  Q
      || ||||||||||||||||||     |||||||||||||||||||||||| |||| || ||||||    
T  13780642 caaaatagtcgttgcttcactctttcagtcttctgcaatgcttagacgagattaaattcattgaaca 13780576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 12726383 - 12726166
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||| ||||||||||||||||| ||| |||||         ||||||||||||| ||||| | | ||  ||    
T  12726383 aaacagagtagtggaggtagtggttgtacactttgtacaattgtactttgttaactctctttaaagagt-aagcatccaatgctttcaaatcctttcaaa 12726285  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||||||| ||||||||| ||  |||||||||| |||||||||||||  |||||| |||| |||||||||||||||||||||   |||| |||||||||    
T  12726284 atagtcgttacttcactcttctagtcttctgcaaagcttagacgagattgaatccattgaatagcctttgaagctttaagtcttgaatctcctgatgaac 12726185  T
Q  205 ttcagcttctggtgatctt 223  Q
    |||| ||||| ||||||||    
T  12726184 ttcaacttcttgtgatctt 12726166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 182
Target Start/End: Original strand, 40799880 - 40800056
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||        |||| ||||||| ||||||| | | ||  ||    
T  40799880 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaagtatccaattccttcaaatactttcaaa 40799978  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagcttta 182  Q
     ||||||||||||| || | |   |||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  40799979 ctagtcgttgcttcgcttttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagcttta 40800056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 16658775 - 16658541
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||| |||||||||| || ||||||||||||||||||||||||| | ||||||||||||||        ||||||||||||| ||||| | | ||    
T  16658775 acacaaactaagtagtggaggtagtggttgtacacttcgtacaattgtattatgtcaacgctcttcaaagaat-aagcatccaatgctttcaaatccttt 16658677  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || ||||||||||||||||   ||| |||| || ||||||| ||||||||  |||| | |||||| ||||||||| || ||||||  ||||| |||||    
T  16658676 caaaatagtcgttgcttcactgctctggtcttttgtaatgcttggacgagattgaatcaattgaacaacctttgaagtttcaagtcttgcatctcctgat 16658577  T
Q  201 gaacttcagcttctggtgatcttttgattctgatga 236  Q
    ||||| || ||||||||||||||  | |||||||||    
T  16658576 gaactacaacttctggtgatcttcagcttctgatga 16658541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 223
Target Start/End: Original strand, 14969341 - 14969550
Alignment:
Q  13 tagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgt 112  Q
    ||||||||||| ||||||||||||||||| || ||||||||||||||||| ||         |||||||||||||| |||| | | ||  || |||| ||    
T  14969341 tagtggagatagtggttgtacacttcgtaaaaatgtactttgtcaacgctatttgaagaat-aagcatccaatgccatcaaatcctttcaaaatagttgt 14969439  T
Q  113 tgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagctt 212  Q
    ||||| ||||| |   |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||| | || |||||||  |||||    
T  14969440 tgctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatatcctcatgaactagagctt 14969539  T
Q  213 ctggtgatctt 223  Q
    |||||||||||    
T  14969540 ctggtgatctt 14969550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 211
Target Start/End: Complemental strand, 19249558 - 19249361
Alignment:
Q  12 gtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcg 111  Q
    |||||||||  | |||||||||||||||||||||||| || | ||| ||||||||       ||| |||||||||||||||| | | ||||||||||  |    
T  19249558 gtagtggagtaagtggttgtacacttcgtacaattgtcctatttcagcgctcttcaaagaa-caaacatccaatgccttcaaatccttttgaattagctg 19249460  T
Q  112 ttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagct 211  Q
    |||||||||||| ||| |||||||||||||| || || ||| |||||   |||||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  19249459 ttgcttcactcttctggtcttctgcaatgct-aggcgtgattaaatcgtttgaacaacctttgaagctttaagtctctcatcttctaatgatcttcagct 19249361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 47207712 - 47207925
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcattt-ga 103  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||  ||||||  |    
T  47207712 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaagcatccaatgccttcaa-atcatttcaa 47207809  T
Q  104 attagtcgttgcttcactctcctgatcttctgcaatgc-ttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatga 202  Q
    | ||| |||||||||||| | |   ||||||||||||| ||||||||||| ||||||| |||||| ||||||||| ||||  | |  ||||| |||||||    
T  47207810 actagccgttgcttcacttttccagtcttctgcaatgctttagacgagattaaatccattgaacaacctttgaagtttta--tgttgcatctcctgatga 47207907  T
Q  203 acttcagcttctggtgat 220  Q
    ||| ||||||||||||||    
T  47207908 actgcagcttctggtgat 47207925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 47405568 - 47405362
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||| |||||        ||| |||| ||||||||||| | | ||  || ||||     
T  47405568 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacactctt-tgaagaacaaacatcaaatgccttcaaatcctttcaaactagtt 47405470  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagc 210  Q
    ||||||||| | | |   |||||||||||||||||||||||| ||||||| |||||||||||||||||||||  | |  |||||  ||||||||| ||||    
T  47405469 gttgcttcatttttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagcttta--tgttgcatctcgtgatgaactgcagc 47405372  T
Q  211 ttctggtgat 220  Q
    ||||||||||    
T  47405371 ttctggtgat 47405362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 19889100 - 19888880
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||| | ||||||  || |||       |||||||||||||| ||||| | | ||    
T  19889100 acacaaactgag--gtggagatagtggttgtacacttcgtacaattgtaatatgtcaatcctattcaaagaa-caagcatccaatgctttcaaatccttt 19889004  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacag-cctttgaagctttaagtctctcatcttctga 199  Q
      || |||||||||||||||||  ||| |||| |||||||||| ||||||||  |||||| ||||||| | ||| |||||||||||||  |||||  |||    
T  19889003 caaaatagtcgttgcttcactcatctggtcttttgcaatgcttggacgagattgaatccattgaacagtctttttaagctttaagtcttgcatctcttga 19888904  T
Q  200 tgaacttcagcttctggtgatctt 223  Q
    ||||||| ||||||| ||||||||    
T  19888903 tgaactttagcttctagtgatctt 19888880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 215
Target Start/End: Complemental strand, 18142900 - 18142696
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    ||||||||||| || ||||||||||||||||||||||||||||||| |||||||||         |||||| ||||||||| || | | ||  || ||||    
T  18142900 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgtaaacgctctt-tgaagaaaaagcattcaatgcctttaaatcctttcaaaatagt 18142802  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
     ||||||||||||| |   |||||||||||||| | |||||||  |||||| |||| ||||||||||||||||| |||  ||||| ||||||||||  ||    
T  18142801 tgttgcttcactcttccagtcttctgcaatgctcaaacgagattgaatccattgaatagcctttgaagctttaaatcttgcatctcctgatgaactagag 18142702  T
Q  210 cttctg 215  Q
    ||||||    
T  18142701 cttctg 18142696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 5 - 236
Target Start/End: Original strand, 11223569 - 11223797
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| |||||||||||||| ||||||||||||||||||||   ||||||||||||||||||        |||||||||||||||||||| | | ||  ||    
T  11223569 aaacagagtagtggagatagtggttgtacacttcgtacaaacatactttgtcaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaa 11223667  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||||||||||||||| |     ||||||||||||| ||||||||||  || ||| |||||||| |||||||||  |||| | | |||| |||||||||    
T  11223668 atagtcgttgcttcactttttcagtcttctgcaatgcatagacgagattgaacccattgaacagcttttgaagctcaaagt-tgt-atctcctgatgaac 11223765  T
Q  205 ttcagcttctggtgatcttttgattctgatga 236  Q
    | | |||||||||||| ||  |||||||||||    
T  11223766 tgctgcttctggtgattttcagattctgatga 11223797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 13824095 - 13824256
Alignment:
Q  25 tggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcattt-gaattagtcgttgcttcactct 123  Q
    |||||||||||||||||||||||||||||||||||||||||        ||| ||||||||||||||||  ||||||  || |||| |||||||||||||    
T  13824095 tggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaaacatccaatgccttcaa-atcatttcaaaatagttgttgcttcactct 13824192  T
Q  124 cctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtct 187  Q
     |   |||||| || || ||||||||||| ||||||| |||||| |||||||||||||||||||    
T  13824193 tccagtcttcttcattgtttagacgagattaaatccattgaacaacctttgaagctttaagtct 13824256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 287
Target Start/End: Complemental strand, 46349991 - 46349717
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    ||||||||||  | ||||||||||||||||||||| |||||||||||| | ||| |       |||||||||||||||||||| | | ||  ||||||||    
T  46349991 agtagtggaggcagtggttgtacacttcgtacaatcgtactttgtcaatgttct-ctgaagaacaagcatccaatgccttcaaatcctttcaaattagtc 46349893  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagc 210  Q
    ||||||||||| | |   ||||||||||||||||||||||||   ||| | |||||| | |||||||  ||||||  ||  ||| |||||||||| || |    
T  46349892 gttgcttcacttttccagtcttctgcaatgcttagacgagattggatcaattgaacaacttttgaagtcttaagttgct--tctcctgatgaactgcaac 46349795  T
Q  211 ttctggtgatcttttgattctgatg-agatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||||| ||  | |||| ||| |  ||| | ||||||||| | |||||||||| ||| ||||||||||||||||    
T  46349794 ttctggtgattttcagcttctaatgaacttgcttctgatgaactcgcttctgatgacgtcaccacttcaggagcactt 46349717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 287
Target Start/End: Complemental strand, 25398290 - 25398147
Alignment:
Q  142 ttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgattctgatgagatgc 241  Q
    ||||||||||| |||| || |||||| |||||||||||||||||||  |||||| ||||||    || |||||| |||||||  | |||| |||||||||    
T  25398290 ttagacgagattaaattcattgaacaacctttgaagctttaagtcttgcatcttatgatgaga--caacttctgatgatcttcagcttctaatgagatgc 25398193  T
Q  242 ctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
     | ||||||||||| |||||||||| || |||||||||||||||||    
T  25398192 ttctgatgaacttgcttctgatgacgtcgtcacttcaggagcactt 25398147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 20627578 - 20627372
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    |||||||||| || ||||||||||||||||||||  |||||||||||||||||||        |||||||||||||||||||| | ||||  || ||||     
T  20627578 agtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt-tgataaacaagcatccaatgccttcaaatccattcaaaatagtt 20627480  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagc 210  Q
    ||||||||||| | |   |||||||||||  ||||||||| |  |||||| | |||| | ||||||||||||||  |  ||||| |||||||||| || |    
T  20627479 gttgcttcacttttccagtcttctgcaatcattagacgagtttgaatccattaaacatcttttgaagctttaag--ttgcatctcctgatgaactgcaac 20627382  T
Q  211 ttctggtgat 220  Q
    ||||||||||    
T  20627381 ttctggtgat 20627372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22804180 - 22804115
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttc 66  Q
    ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  22804180 acacaaattgagtagtggagatagtggttttacacttcgtacaattgtactttgtcaacgctcttc 22804115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 287
Target Start/End: Original strand, 41495184 - 41495261
Alignment:
Q  210 cttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||||||  | |||||||||||||| | ||||||||||| |||||||||||||||||||||| ||||||||    
T  41495184 cttctggtgatcttcagtttctgatgagatgcttctgatgaacttgcttctgatgacatcatcacttcatgagcactt 41495261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 11868275 - 11868335
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || ||||||||||||||||||||| |||||||||||||||||||    
T  11868275 aaacagagtagtggaggtagtggttgtacacttcgtacaatcgtactttgtcaacgctctt 11868335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 25398408 - 25398348
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || |||||||||||||||||||||||| ||||||||||||||||    
T  25398408 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtgctttgtcaacgctctt 25398348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 2785075 - 2785283
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    ||||||||||| || ||||||||||||||||||||  ||||| |||||||||||||        |||||||||||||| ||||| | | ||  || ||||    
T  2785075 gagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagt 2785174  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
     ||||||||||| | |   |||||||||||  ||||||||| |  |||||  | |||| | ||||||||||||||  |  ||||| |||||||||| ||     
T  2785175 tgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacaacttttgaagctttaag--ttgcatctcctgatgaactacaa 2785272  T
Q  210 cttctggtgat 220  Q
    |||||||||||    
T  2785273 cttctggtgat 2785283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 12968312 - 12968446
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| |||||||||||||| ||||||||||||||||| |||||| ||||  ||||| |||||        ||| ||||||||||||||| ||| ||||||    
T  12968312 aaacagagtagtggagatagtggttgtacacttcgtataattgtccttttccaacgttcttcaaagaat-aagtatccaatgccttcaaattcttttgaa 12968410  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatg 140  Q
    ||||||||| |||||  || ||  ||||||||||||    
T  12968411 ttagtcgttacttcatgcttctagtcttctgcaatg 12968446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 14955433 - 14955493
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || ||||||||||||||||||||  |||||||||||||||||||    
T  14955433 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt 14955493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 53056880 - 53056765
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||  ||||||||| |||||||||        |||||||||||||||||||| | | ||  ||    
T  53056880 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtaaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaa 53056782  T
Q  105 ttagtcgttgcttcact 121  Q
     ||||||||||||||||    
T  53056781 atagtcgttgcttcact 53056765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 287
Target Start/End: Original strand, 13824265 - 13824319
Alignment:
Q  233 atgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||| | ||||||||||| |||||||||| ||||||||||||||||||||    
T  13824265 atgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 13824319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 46796514 - 46796460
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    ||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  46796514 agtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 46796460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 315
Target Start/End: Complemental strand, 12726158 - 12726090
Alignment:
Q  247 atgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttccttttt 315  Q
    ||||||||| ||||||| || ||||||||||||||||| ||||||| |||| ||||||  |||||||||    
T  12726158 atgaacttgtttctgataacgtcatcacttcaggagcaattctctttagatccttcaagcttccttttt 12726090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 21605807 - 21605747
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||| | |||||||||||||    
T  21605807 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctctt 21605747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 23538312 - 23538264
Alignment:
Q  12 gtagtggagataatggttgtacacttcgtacaattgtactttgtcaacg 60  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||||||    
T  23538312 gtagtggagatagtggttgtacacttcgtacaattgtcctttttcaacg 23538264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 177
Target Start/End: Original strand, 29855415 - 29855587
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||  ||||| |||||||||| ||        |||||||||||||||||||| ||| ||  ||    
T  29855415 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactctgtcaacgct-ttttgaagaacaagcatccaatgccttcaaattctttcaaa 29855513  T
Q  105 ttagtcgttgcttcactctcctga-tcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaag 177  Q
     ||| |||||||||||| |  | | |||||||||||  ||||||||| |  |||||| | |||||| |||||||    
T  29855514 ctagccgttgcttcactttttttagtcttctgcaatctttagacgaggttgaatccattaaacagcttttgaag 29855587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 52920695 - 52920743
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  52920695 acttcaggagcacttctcttcagatgcttcaagcttcctttttgttgat 52920743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 21640878 - 21640933
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||||||||||||| ||||||||||||||||| ||  ||||| |||||||||||||    
T  21640878 gagtagtggagatagtggttgtacacttcgtaaaaacgtactatgtcaacgctctt 21640933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 223
Target Start/End: Complemental strand, 26417762 - 26417616
Alignment:
Q  76 agcatccaatgccttcaacttcatttgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttga 175  Q
    |||||||||||||||||| ||| |||||||||| |||||||||| ||| ||  ||||||| ||||  ||| || ||| ||| |   ||||||  ||||||    
T  26417762 agcatccaatgccttcaaattcttttgaattagccgttgcttcattcttctagtcttctggaatg-ataggcgtgattaaaacatttgaacaaactttga 26417664  T
Q  176 agctttaagtctctcatcttctgatgaacttcagcttctggtgatctt 223  Q
    ||||| || ||| ||| |||||||||| ||||| || ||| |||||||    
T  26417663 agcttcaattctttcagcttctgatgatcttcaactcctgatgatctt 26417616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 33583240 - 33583295
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    ||||| ||||| || ||||||||||||||||||||  |||||||||||||||||||    
T  33583240 gagtattggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt 33583295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 24775432 - 24775390
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| ||||||||||||||||||||||| |||||||    
T  24775432 tgatgaacttgcttctgatgacatcatcacttcagaagcactt 24775390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 40851188 - 40851230
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  40851188 tgatgaacttgcttctgatgacgtcatcacttcaggagcactt 40851230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 49666330 - 49666288
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  49666330 tgatgaacttgcttctgatgacgtcatcacttcaggagcactt 49666288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 38177574 - 38177509
Alignment:
Q  257 ttctgatgacatcatcacttcaggagcacttctc-ttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||| ||||| ||||||||||||||||| |||||||| |||||  |||||||||| ||||    
T  38177574 ttctgatgacgtcatctcttcaggagcacttctcattcagatgtttcaagcttcctttttgttgat 38177509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 286
Target Start/End: Complemental strand, 46796307 - 46796266
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcact 286  Q
    ||||||||||| |||||||||| |||||||||||||||||||    
T  46796307 tgatgaacttgcttctgatgacgtcatcacttcaggagcact 46796266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 6091022 - 6091070
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||||||||||||||||||||  ||| |||||| ||||    
T  6091022 acttcaggagcacttctcttcagatgcttcaagcttcatttttgttgat 6091070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 321
Target Start/End: Original strand, 16032766 - 16032818
Alignment:
Q  269 catcacttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||||||| ||||||||||||||||  ||| |||||| ||||    
T  16032766 catcacttcaggagcacttttcttcagatgcttcaagcttcatttttgttgat 16032818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 21636823 - 21636763
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||  || ||||||||||||||||||||  ||||| |||||||||||||    
T  21636823 aaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 21636763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 24775687 - 24775627
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||  || ||||||||||||||||||||  |||||||||||| ||||||    
T  24775687 aaacagagtagtggatgtagtggttgtacacttcgtacaaacgtactttgtcaaagctctt 24775627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 30054370 - 30054310
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || |||||||||| |||||||||  ||||| |||||||||||||    
T  30054370 aaacagagtagtggagttagtggttgtacatttcgtacaaacgtactatgtcaacgctctt 30054310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 31303679 - 31303727
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||||||||||||||||| ||  |||||||||| ||||    
T  31303679 acttcaggagcacttctcttcagatgctttaagcttcctttttgttgat 31303727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 37467592 - 37467640
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||| ||||||||||||||||  |||||||||| ||||    
T  37467592 acttcaggagcacttatcttcagatgcttcaagcttcctttttgttgat 37467640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 40800100 - 40800164
Alignment:
Q  257 ttctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||| ||| |||||||||||||||| |||||||| |||| ||  |||||||||| ||||    
T  40800100 ttctgatgacgtcaccacttcaggagcacttttcttcagacgctttaagcttcctttttgttgat 40800164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 50300249 - 50300289
Alignment:
Q  25 tggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  50300249 tggttgtacacttcgtacaaacgtactttgtcaacgctctt 50300289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 15903494 - 15903537
Alignment:
Q  278 aggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||||||||||  |||||||||| ||||    
T  15903494 aggagcacttctcttcagatgcttcaagcttcctttttgttgat 15903537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 16199742 - 16199683
Alignment:
Q  228 ttctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||||| ||| | | ||||||||| |||||||||| |||||| |||||||||||||    
T  16199742 ttctgatgaggtgcttcttatgaacttgcttctgatgacgtcatcagttcaggagcactt 16199683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 22804031 - 22803972
Alignment:
Q  228 ttctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||||||||| | ||| ||||||| || ||||||| ||||||||| ||||||||||    
T  22804031 ttctgatgagatgcttctgaggaacttgcttttgatgacgtcatcactttaggagcactt 22803972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 49666553 - 49666498
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||||||||||||| ||||||||||||||||||||  ||| | |||||| ||||||    
T  49666553 gagtagtggagatagtggttgtacacttcgtacaaacgtaatatgtcaatgctctt 49666498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 287
Target Start/End: Complemental strand, 9390994 - 9390964
Alignment:
Q  257 ttctgatgacatcatcacttcaggagcactt 287  Q
    |||||||||||||||||||||||||||||||    
T  9390994 ttctgatgacatcatcacttcaggagcactt 9390964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 11223792 - 11223834
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||    
T  11223792 tgatgaacttgcttctgatgacgtcaccacttcaggagcactt 11223834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 11869297 - 11869339
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||    
T  11869297 tgatgaaattgcttctgatgacatcaccacttcaggagcactt 11869339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 12963015 - 12962973
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||    
T  12963015 tgatgaacttgcttctgatgacgtcatcacttcaagagcactt 12962973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 14969558 - 14969600
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| || ||||||| ||||||||||||||||||||    
T  14969558 tgatgaacttgcttatgatgacgtcatcacttcaggagcactt 14969600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 21636594 - 21636552
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||| |||| |||||||||| ||||||||||||||||||||    
T  21636594 tgatgaccttgcttctgatgacgtcatcacttcaggagcactt 21636552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 30054156 - 30054114
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||    
T  30054156 tgatgaacttgcttctgatgacgtcatcacttcatgagcactt 30054114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 33583494 - 33583532
Alignment:
Q  249 gaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  33583494 gaacttgtttctgatgacgtcatcacttcaggagcactt 33583532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 33598114 - 33598152
Alignment:
Q  249 gaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  33598114 gaacttgtttctgatgacgtcatcacttcaggagcactt 33598152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 50300446 - 50300488
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| |||| |||||||||||||||    
T  50300446 tgatgaacttgcttctgatgacgtcattacttcaggagcactt 50300488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 5213583 - 5213640
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgct 62  Q
    |||| ||||||||||| || ||||||||||||||||||||  |||||  |||||||||    
T  5213583 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactacgtcaacgct 5213640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 17238823 - 17238775
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||||||| |||| ||  |||||||||| ||||    
T  17238823 acttcaggagcacttctcttcagacgctttaagcttcctttttgttgat 17238775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 22140770 - 22140830
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || ||||| |||||||||||||   ||||| |||||||||||||    
T  22140770 aaacagagtagtggaggtagtggttatacacttcgtacatacgtactatgtcaacgctctt 22140830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 22803970 - 22803922
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||||| ||| |||||  |||||||||| ||||    
T  22803970 acttcaggagcacttctcttcaaatgtttcaagcttcctttttgttgat 22803922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 41495264 - 41495312
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||| ||||||||||||||||||||| ||  |||||||||| ||||    
T  41495264 acttcagaagcacttctcttcagatgctttaagcttcctttttgttgat 41495312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 7e-77; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 33256429 - 33256146
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||| | | ||    
T  33256429 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaa-caagcatccaatgccttcaaatccttt 33256331  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    | || |||||||||||||||||| |   |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||||| ||| |    
T  33256330 taaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgtt 33256231  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||| ||||||||||||||  ||| |||||||||||||| | ||||||||||| ||||||| |  ||||||||||||||||||||    
T  33256230 gaactttagcttctggtgatc--ttgcttctgatgagatgcttctgatgaacttgcttctgataatgtcatcacttcaggagcactt 33256146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 33276601 - 33276318
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||       |||||||||||||||||||| | | ||    
T  33276601 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaa-caagcatccaatgccttcaaatccttt 33276503  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    | || |||||||||||||||||| |   |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||||| ||| |    
T  33276502 taaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctggt 33276403  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||| ||||||||||||||  ||| |||||||||||||| | ||||||||||| ||||||| |  ||||||||||||||||||||    
T  33276402 gaactttagcttctggtgatc--ttgcttctgatgagatgcttctgatgaacttgcttctgataatgtcatcacttcaggagcactt 33276318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 5 - 287
Target Start/End: Complemental strand, 22600256 - 22599975
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| | | ||  ||    
T  22600256 aaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaa 22600158  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     ||||||||| || ||||| |   ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||  ||||| |||||||||    
T  22600157 atagtcgttgttttactcttccagtcttctgcaatgcttagacaagattaaatccattgaacagcctttgaagctttaagtcttgcatctcctgatgaac 22600058  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |  ||||||||||||||||| | |||||||||||||| | |||| |||||| |||||||||  ||||||||||||||||||||    
T  22600057 tagagcttctggtgatctttagcttctgatgagatgcttctgataaacttgcttctgatgatgtcatcacttcaggagcactt 22599975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 19717526 - 19717837
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||| | |||||| || | ||||||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||| | | ||    
T  19717526 acacaaactgatttgtggagttagttgttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatccgatgccttcaaatccttt 19717624  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||||| |   || |||||||||||| |||||||| ||||||| |||||| |||||||||||||||||||  ||||| |  ||    
T  19717625 caaaatagtcgttgcttcactcttccagtcctctgcaatgcttcgacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctccatat 19717724  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgct 300  Q
    |||||| ||||||||||||||  ||| |||||||||||||| | ||||||||||| || ||||||| ||||||||||||||||||||||||||||| |||    
T  19717725 gaactttagcttctggtgatc--ttgcttctgatgagatgcttctgatgaacttgcttatgatgacgtcatcacttcaggagcacttctcttcagacgct 19717822  T
Q  301 tcaattttccttttt 315  Q
    | ||  |||||||||    
T  19717823 ttaagcttccttttt 19717837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 3 - 287
Target Start/End: Complemental strand, 20954549 - 20954266
Alignment:
Q  3 acaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttg 102  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||        |||| |||||||| ||||| | | ||      
T  20954549 acaaactgagtagtggagatagtggttgtacacttggtacaattgtactttgtcaacgctcttcaaagaat-aagcctccaatgctttcaaatcctttca 20954451  T
Q  103 aattagtcgttgcttcactct-cctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatg 201  Q
    || | | | |||||||||||| |||| |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||||| ||||||    
T  20954450 aaatggccattgcttcactcttcctg-tcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatg 20954352  T
Q  202 aacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||  ||||||||||||||||  | |||||||||||||| | |||||||||||| ||||||||| ||||||||||||||||||||    
T  20954351 aactagagcttctggtgatcttcagcttctgatgagatgcttctgatgaacttgaatctgatgacgtcatcacttcaggagcactt 20954266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 22153863 - 22154144
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||       ||| |||||||||| ||||| | | ||  ||    
T  22153863 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caatcatccaatgctttcaaatcctttcaaa 22153961  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
    ||||| ||||||||||| | ||  |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||||| |||||||||    
T  22153962 ttagttgttgcttcactattctagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatctcctgatgaac 22154061  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||||||||||| |  |||| ||||||||| | | | ||||||| |||| ||||| ||||||||| |||| |||||    
T  22154062 ttcagcttctggtgatcttctacttcttatgagatgcttctaaggaacttgcttctaatgacgtcatcactttaggaacactt 22154144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 21028795 - 21029029
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||| ||||||||       |||||||||||||||||||||||||||    
T  21028795 acacaaactgagtagtggagatagtggctgtacacttcatacaattgtactttgtcagcgctcttcaaaaag-caagcatccaatgccttcaacttcatt 21028893  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    |||||||||||||||||||||||  || ||||||||||||||| || ||||| |||| || |||||| | | |||||||||||||||||||| |||| ||    
T  21028894 tgaattagtcgttgcttcactcttatggtcttctgcaatgcttggatgagattaaattcattgaacaacatatgaagctttaagtctctcatattctaat 21028993  T
Q  201 gaacttcagcttctggtgatcttttgattctgatga 236  Q
    ||  |||||||||||||||||||  | |||||||||    
T  21028994 gatattcagcttctggtgatcttcagcttctgatga 21029029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 26702207 - 26701973
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||| ||| |||||||||| || ||||||||||||||||||||||||||||||||| | ||||||       |||| ||||||||||||||||||||||    
T  26702207 acacatactaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcatcactcttcaaaaag-caagaatccaatgccttcaacttcatt 26702109  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    ||||||| | ||||||||||||||||| |||||||||||||| | |||||||  ||||||   ||||||||||||||||||||||||| |||||||||||    
T  26702108 tgaattaattgttgcttcactctcctggtcttctgcaatgctcaaacgagattgaatccatataacagcctttgaagctttaagtctcccatcttctgat 26702009  T
Q  201 gaacttcagcttctggtgatcttttgattctgatga 236  Q
    |||||| ||||||||||||||||  | |||||||||    
T  26702008 gaactttagcttctggtgatcttcagtttctgatga 26701973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 28492482 - 28492177
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||       |||||||||||||||||||| | | ||    
T  28492482 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctattcaaagaa-caagcatccaatgccttcaaatccttt 28492384  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||| ||||||||||||| ||  ||||||||||||||||||||| || ||||||| |||||| |||||||||||||||||||  ||||| |||||    
T  28492383 caaaatagttgttgcttcactcttctagtcttctgcaatgcttagacgatattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgat 28492284  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgct 300  Q
    ||||| || ||||||  ||||||  | |||              ||||||||||| |||||||||| ||||||||| ||||||||||||||||||| |||    
T  28492283 gaactacaacttctgaagatcttcagcttc--------------tgatgaacttgcttctgatgacgtcatcacttgaggagcacttctcttcagacgct 28492198  T
Q  301 tcaattttcctttttgatgat 321  Q
    | ||  |||||||||| ||||    
T  28492197 ttaagcttcctttttgttgat 28492177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 12284425 - 12284646
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||| ||||||||||| || |||||||||||||||||||||||| ||||||||||||||       |||||||||||||| ||||| | | ||    
T  12284425 acacaaactgattagtggagatagtgtttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaa-caagcatccaatgctttcaaatccttt 12284523  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||||  ||| |||| |||||||||| ||||||||  |||||| |||||| ||||||||||| |||||||  |||||||||||    
T  12284524 caaaatagtcgttgcttcactcctctggtcttttgcaatgcttggacgagattgaatccattgaacaacctttgaagctctaagtcttgcatcttctgat 12284623  T
Q  201 gaacttcagcttctggtgatctt 223  Q
    |||||||||||||||||||||||    
T  12284624 gaacttcagcttctggtgatctt 12284646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 11 - 287
Target Start/End: Original strand, 35401821 - 35402094
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    |||||||||| || ||||||||||||| |||||||||||||||||||||||||||        |||||||||||||||||||| | | ||  || |||||    
T  35401821 agtagtggaggtagtggttgtacactttgtacaattgtactttgtcaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaaatagtc 35401919  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagc 210  Q
    ||||||||||| | |   ||||||| | || ||| ||||||| ||||||| ||||||| ||||||||||||||||||  |||||||||||||    ||||    
T  35401920 gttgcttcacttttccagtcttctgtattgtttaaacgagattaaatccattgaacagtctttgaagctttaagtcttgcatcttctgatgaga--cagc 35402017  T
Q  211 ttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||||||||  | |||||||||||||| | ||||||||||| |||||||||  ||||||||||||||||||||    
T  35402018 ttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgaggtcatcacttcaggagcactt 35402094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 1577869 - 1578171
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||        |||||||||||||| ||||| ||| ||    
T  1577869 acacaaactgagtagtggagatagtggttgtacacttagtacaattatactttgtcaacgctctt-aaaagaacaagcatccaatgctttcaaattcttt 1577967  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||||| |   |||||||||||||||||||||||| ||||| | |||||| ||||||||||| |||||||  ||||| |||||    
T  1577968 caaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatctattgaacaacctttgaagctctaagtcttgcatctcctgat 1578067  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgct 300  Q
     ||||| ||||||| ||||||  ||| |||||| ||||               || |||||||||| |||||||||||||||||||||||||||||||||    
T  1578068 aaactttagcttcttgtgatc--ttgcttctgacgaga---------------tgtttctgatgacgtcatcacttcaggagcacttctcttcagatgct 1578150  T
Q  301 tcaattttcctttttgatgat 321  Q
    | ||  |||||||||| ||||    
T  1578151 ttaagcttcctttttgttgat 1578171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 10757423 - 10757645
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||       ||| |||||||||| ||||| | | ||    
T  10757423 acacaaactgagtagtgaagatagtggttgtacacttcgtacaattgtactttgtcaatgctcttcaaagaa-caatcatccaatgctttcaaatccttt 10757521  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcc-tttgaagctttaagtctctcatcttctga 199  Q
      || |||| ||||||||||||| ||||| |||||||||||||||||||||| ||||||| |||||| || |||||||||||||||||  ||||| ||||    
T  10757522 caaaatagttgttgcttcactcttctgattttctgcaatgcttagacgagattaaatccattgaacaaccttttgaagctttaagtcttgcatctcctga 10757621  T
Q  200 tgaacttcagcttctggtgatctt 223  Q
    ||||||||||||| || |||||||    
T  10757622 tgaacttcagcttttgatgatctt 10757645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 38282573 - 38282853
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||        ||||||| ||||||||| || | | ||  ||    
T  38282573 aaacagagtagtggagatagtggttgta-acttcgtacaattgtactttgtcaacgctctt-tgaagaacaagcattcaatgcctttaaatcctttcaaa 38282670  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     ||  |||||||||||||| |   |||||||| ||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||||| |||||||||    
T  38282671 atacccgttgcttcactcttccagtcttctgcgatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaac 38282770  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |  ||||| ||||||||||| |  ||||||||||||| | |||| |||||| |||||||||  |||| |||||||||||||||    
T  38282771 tagagcttttggtgatctttagcatctgatgagatgcttctgataaacttgcttctgatgaggtcattacttcaggagcactt 38282853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 9 - 321
Target Start/End: Original strand, 48704214 - 48704538
Alignment:
Q  9 tgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattag 108  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||       |||||||||| ||||||||| | | ||  || |||    
T  48704214 tgagtagtggagacattggttgtacacttcgtacaattgtactttgtcaacgttcttcaaagaa-caagcatccagtgccttcaaatcctttcaaaatag 48704312  T
Q  109 tcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttca 208  Q
    | |||| |||||||| |   ||||||||| |||||| ||||||| ||||||| |||||| |||||||||||||||||||  ||||||||||||||||| |    
T  48704313 ttgttgtttcactcttccagtcttctgcattgcttaaacgagattaaatccattgaacaacctttgaagctttaagtcttgcatcttctgatgaacttta 48704412  T
Q  209 gcttctggtgatcttttgattctgatgagatgcctatgatgaact---------------tgattctgatgacatcatcacttcaggagcacttctcttc 293  Q
    ||||||||||||||   | |||||||||||||| | |||||||||               || |||||||||| |||||||||||||||||||||||||     
T  48704413 gcttctggtgatcta--gcttctgatgagatgcttctgatgaactagcttctgatgaccttgtttctgatgacgtcatcacttcaggagcacttctcttt 48704510  T
Q  294 agatgcttcaattttcctttttgatgat 321  Q
    |||||||||||  ||| |||||| ||||    
T  48704511 agatgcttcaagcttcatttttgttgat 48704538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 2268537 - 2268814
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||        ||||||| |||||||||||| | ||||| ||    
T  2268537 aaacagagtagtcgaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt-tgacgaacaagcattcaatgccttcaaat-catttcaa 2268634  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
      | | ||||||| ||||| |   |||||| ||||| ||||||||||| ||||||| |||||| |||||||||| ||||||||  ||||| || ||||||    
T  2268635 --aatagttgcttaactcttccagtcttctacaatgattagacgagattaaatccattgaacaacctttgaagccttaagtcttgcatctcctaatgaac 2268732  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    || ||||||| ||||| | ||| |||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||||    
T  2268733 tttagcttctagtgat-tgttgcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 2268814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 32786005 - 32785798
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| | | ||  || |||||    
T  32786005 agtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctt-ttaagaacaagcatccaatgccttcaaatcctttcaaactagtc 32785907  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagc 210  Q
    ||||||||||| | |   |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  |||||  ||||||||| || |    
T  32785906 gttgcttcacttttccagtcttctgcaatgcttagacgagattaaatcca-tgaacaacctttgaagctttaagtcttgcatctcatgatgaactacaac 32785808  T
Q  211 ttctggtgat 220  Q
    |||| |||||    
T  32785807 ttctagtgat 32785798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 22201814 - 22201601
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| | | ||    
T  22201814 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttc-atagaacaagcatccaatgccttcaaatccttt 22201716  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||| ||||||| ||| |     |||||||||||||||||||||||| |||| || ||| |||||||||  |||||||||||  ||||| |||||    
T  22201715 caaaatagttgttgctttactttttcagtcttctgcaatgcttagacgagattaaatgcattgagcagcctttgtcgctttaagtcttgcatctcctgat 22201616  T
Q  201 gaacttcagcttctg 215  Q
    || ||| ||||||||    
T  22201615 gagctttagcttctg 22201601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 5 - 236
Target Start/End: Original strand, 1900351 - 1900581
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || |||||||||||||| ||||| ||||||||||||||||||||        ||||||| ||||||||| || | | ||  ||    
T  1900351 aaacagagtagtggaggtagtggttgtacacttcttacaactgtactttgtcaacgctctt-tgaagaacaagcattcaatgcctttaaatcctttcaaa 1900449  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||||||||||||||||| |   |||||||||||||||||||||||| ||||||| |||| | |||||||||||||||||||  ||||| |||||||||    
T  1900450 atagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaataacctttgaagctttaagtcttgcatctcctgatgaac 1900549  T
Q  205 ttcagcttctggtgatcttttgattctgatga 236  Q
    |  | ||||||| ||||||| | |||||||||    
T  1900550 tagatcttctggcgatctttagcttctgatga 1900581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 287
Target Start/End: Complemental strand, 22427425 - 22427151
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||| ||        |||||||||||||||||||| | | ||  || |||||    
T  22427425 agtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctttt-ttaagaacaagcatccaatgccttcaaatcctttcaaactagtc 22427327  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagc 210  Q
    ||||||||||| | |   |||||||||||||||||||||||| ||||| | ||||||| |||||||||||||  | |  ||||| ||||||||||  |||    
T  22427326 gttgcttcacttttccagtcttctgcaatgcttagacgagattaaatctattgaacagtctttgaagcttta--tgttgcatctcctgatgaactggagc 22427229  T
Q  211 ttctggtgatcttttgattctgatg-agatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||||| ||  | |||||||| |  ||| | || |  ||||| |||||||||||||| ||||||||||||||||    
T  22427228 ttctggtgattttcagcttctgatgaacttgcttctggtagacttgcttctgatgacatcaccacttcaggagcactt 22427151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 11 - 287
Target Start/End: Complemental strand, 23036595 - 23036322
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    ||||| |||| || |||||||||||||||||||||||| ||||||  ||||||||        ||||||||||||| |||||| | | ||  || ||||     
T  23036595 agtagaggaggtagtggttgtacacttcgtacaattgttctttgttgacgctctt-tgaagaacaagcatccaatgtcttcaaatcctttcaaaatagtt 23036497  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagc 210  Q
    |||| |||||| |  |  ||||||||| |  ||||||||||| ||||||| |||| |||||||||||||||||||||  |||||||||||||    ||||    
T  23036496 gttgtttcacttttttagtcttctgcattatttagacgagattaaatccattgaatagcctttgaagctttaagtcttgcatcttctgatgaga--cagc 23036399  T
Q  211 ttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||||||||  | |||||||||||||| | ||||||| ||| |||||||||  ||||||||||||||||||||    
T  23036398 ttctggtgatcttcagcttctgatgagatgcttctgatgaaattgcttctgatgatgtcatcacttcaggagcactt 23036322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 21191943 - 21191672
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||| ||||||||||| || |||||||||||||||||||||||||||||| |||||||||||       |||||||||||||||||||| | | ||    
T  21191943 acacaaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgccaacgctcttc-aaagaacaagcatccaatgccttcaaatccttt 21191845  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    ||||||||  ||||||||||||| ||| |||||||||||| || |  | ||| |||| |  |||||| ||||||||||||||| | ||           |    
T  21191844 tgaattagctgttgcttcactcttctggtcttctgcaatg-ttgggtgtgattaaatactttgaacaacctttgaagctttaaatgtc-----------t 21191757  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||||||||| ||||  | ||| |||||||||||||| |  |||||||||| |||||||||| ||||||||||||||| ||||    
T  21191756 gaacttcagcttcttgtga--tattgtttctgatgagatgcttcagatgaacttgcttctgatgacgtcatcacttcaggaggactt 21191672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 17025029 - 17024825
Alignment:
Q  14 agtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgtt 113  Q
    ||||||| || ||||||||||||||||||||||||  ||| |||||||||||        |||||||||||||||||||| | | |||||||||||||||    
T  17025029 agtggaggtagtggttgtacacttcgtacaattgtcatttttcaacgctctt-taaagaacaagcatccaatgccttcaaatccttttgaattagtcgtt 17024931  T
Q  114 gcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttc 213  Q
    ||||||||||  || |||| ||||||| |||  || ||| ||||||  ||||||| | |||||||||||| ||||||| |||||||||| ||||||||||    
T  17024930 gcttcactcttatggtcttttgcaatg-ttatgcgtgattaaatcctttgaacagacattgaagctttaattctctcagcttctgatgatcttcagcttc 17024832  T
Q  214 tggtgat 220  Q
    |||||||    
T  17024831 tggtgat 17024825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 12613892 - 12613700
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||| |||||||| || || |||||||||||||||||||||||||||||| |||||||||||       |||||| ||||||| ||||| | | ||    
T  12613892 acacaaacagagtagtgaaggtagtggttgtacacttcgtacaattgtactttgccaacgctcttcaaagaa-caagcaaccaatgctttcaaat-cttt 12613795  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttc 196  Q
    |||||||| |||||||||||||| ||| ||||||||||||| ||| || ||| |||||   |||||| ||||||||||||||| ||||||||||||    
T  12613794 tgaattagccgttgcttcactcttctggtcttctgcaatgc-taggcgtgattaaatcttttgaacaacctttgaagctttaaatctctcatcttc 12613700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 30893094 - 30893316
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||       |||||||| | ||| ||||| | | ||    
T  30893094 acacaaacttagtagtggagatagtggttgtacacttcgtacaattgtactatgtcagcgctattcaaagaa-caagcatctagtgctttcaaatccttt 30893192  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcc-tttgaagctttaagtctctcatcttctga 199  Q
      || ||| | |||||||||||  |||||||| |||||||||| ||||||||  ||||||||||||| || |||||| ||||||||||  ||||| ||||    
T  30893193 caaaatagcctttgcttcactcctctgatcttttgcaatgcttggacgagattgaatccaatgaacaaccttttgaaactttaagtcttgcatctcctga 30893292  T
Q  200 tgaacttcagcttctggtgatctt 223  Q
    ||||||| ||||| ||||||||||    
T  30893293 tgaactttagcttttggtgatctt 30893316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 182
Target Start/End: Complemental strand, 39201066 - 39200890
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||        ||||||||||||| |||||| | | ||  ||    
T  39201066 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaagcatccaatgtcttcaaatcctttcaaa 39200968  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagcttta 182  Q
     ||| ||||||||||||||     |||||||||||||||| | ||||| ||||||| |||||||| ||||||||||||    
T  39200967 ctagccgttgcttcactctttcagtcttctgcaatgcttacatgagattaaatccattgaacagcttttgaagcttta 39200890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 185
Target Start/End: Original strand, 29215803 - 29215982
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || || |||||||||||||||||||||||||||| | |||||||        |||||||||||||||||||| | | ||  ||    
T  29215803 aaacagagtagtggagctagtgattgtacacttcgtacaattgtactttgttatcgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaa 29215901  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagt 185  Q
     ||| |||||||||||| | ||  |||| ||||||||||||||||||| ||||||| | |||| |||||||||||||||||    
T  29215902 ctagccgttgcttcacttttctagtcttttgcaatgcttagacgagattaaatccattaaacaacctttgaagctttaagt 29215982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 182
Target Start/End: Original strand, 2267101 - 2267271
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    |||||||||| || |||||||||||||| |||||||| |||||| ||||||||||        ||| |||||||||||||||| ||| ||  || ||||     
T  2267101 agtagtggaggtagtggttgtacacttcatacaattgcactttgacaacgctctt-tgaagaacaaacatccaatgccttcaaattctttcaaactagtt 2267199  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagcttta 182  Q
    ||||||||||| | |   |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  2267200 gttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagcttta 2267271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 36134196 - 36134410
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||        ||||||||||||| |||||| | | ||  ||    
T  36134196 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaagcatccaatg-cttcaaatcctttcaaa 36134293  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||| |||||| |||| | |   ||||||||| || ||||| ||||| ||||||| |||||| |||||||| ||||||||||   ||||||||||||      
T  36134294 atagttgttgctccacttttccagtcttctgcattgtttagatgagattaaatccattgaacaacctttgaaactttaagtcttgtatcttctgatga-- 36134391  T
Q  205 ttcagcttctggtgatctt 223  Q
      |||||||||||||||||    
T  36134392 gacagcttctggtgatctt 36134410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 182
Target Start/End: Complemental strand, 22464878 - 22464706
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcattt-gaattag 108  Q
    ||||||||||| || ||| ||||||||||||||| |||||||||||||||||||||        ||||||||||||||||||||  ||||||  ||||||    
T  22464878 gagtagtggaggtagtggatgtacacttcgtacacttgtactttgtcaacgctctt-tgaagaacaagcatccaatgccttcaa-atcatttcaaattag 22464781  T
Q  109 tcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcc-tttgaagcttta 182  Q
    ||||||||||||| | |   |||||||||||||||||| ||||| ||||||  |||||| || ||||||||||||    
T  22464780 tcgttgcttcacttttccagtcttctgcaatgcttagatgagattaaatccgttgaacaaccttttgaagcttta 22464706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 16235365 - 16235174
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    ||||||||||| || | ||||||||||||||||||||||||||||||||| |||||        ||||||| |||||||||||| | | ||  || ||||    
T  16235365 gagtagtggaggtagttgttgtacacttcgtacaattgtactttgtcaacactctt-tggagaacaagcattcaatgccttcaaatcctttcaaaatagt 16235267  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatga 202  Q
    |||||||||||| | |   ||||||||| || ||||||||||| ||||| | |||||| ||||||||| ||||| |||  |||||| ||||||    
T  16235266 cgttgcttcacttttccagtcttctgcattgtttagacgagattaaatcaattgaacaacctttgaagttttaaatcttgcatcttatgatga 16235174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 240
Target Start/End: Original strand, 7309928 - 7310058
Alignment:
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
    ||||||||||||||  |  ||||||||||| ||||||||| |   |||||| |||||||| |||||||||||||||||  ||||| ||||||| ||| ||    
T  7309928 cgttgcttcactcttatagtcttctgcaatccttagacgacactgaatccattgaacagcttttgaagctttaagtcttgcatctcctgatgagctttag 7310027  T
Q  210 cttctggtgatcttttgattctgatgagatg 240  Q
    ||| ||||||||||  | |||||||||||||    
T  7310028 cttatggtgatcttcagcttctgatgagatg 7310058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 2834701 - 2834908
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    |||||||||||  | |||||||||| |||||||||| |||||||||||||| ||||        |||||||||||||||||||| | | ||  ||||||     
T  2834701 gagtagtggaggcagtggttgtacaattcgtacaatcgtactttgtcaacgttctt-tgaagaacaagcatccaatgccttcaaatcctttcaaattagc 2834799  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
    |||||||||||| |     |||||  |||||||||||||||||  |||||| |||||| | || |||||||||||  |  ||||| | |||||||| |||    
T  2834800 cgttgcttcactttttcagtcttcaacaatgcttagacgagattgaatccattgaacaactttggaagctttaag--ttgcatctcccgatgaactgcag 2834897  T
Q  210 cttctggtgat 220  Q
    |||||||||||    
T  2834898 cttctggtgat 2834908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 30572203 - 30572264
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttc 66  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  30572203 aaacagagtagtggagatagtggttgtacacttcgtacaatcgtactatgtcaacgctcttc 30572264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 205
Target Start/End: Complemental strand, 25448640 - 25448443
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||  |||||||||||||||||||         ||||||||||||||||||| | | ||  ||    
T  25448640 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt-tgaagaataagcatccaatgccttcaaatcctttcaaa 25448542  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||||| ||||||||| | |   |||||||||||  ||||||||| |  |||||  | |||||| ||||||||||||||  |  |||||||||||||||    
T  25448541 atagtcgctgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacagcttttgaagctttaag--ttgcatcttctgatgaac 25448444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 287
Target Start/End: Complemental strand, 48570305 - 48570026
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||         ||||||||||||||||  | | | |   ||    
T  48570305 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt-tgaagaataagcatccaatgccttttaatccttccaaa 48570207  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     ||||||||| |  ||| | ||  ||||||||||| |||||||||| |  |||||  | |||||| |||||| |||||||  |  ||||| ||||||||     
T  48570206 atagtcgttgttatacttttctagtcttctgcaat-cttagacgagtttgaatccgttaaacagcttttgaaactttaag--ttgcatctcctgatgaat 48570110  T
Q  205 ttcagcttctggtgatcttttgattctgatgaga-tgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    | ||||||||||||||  |  | ||||||| | | ||| ||||||||||||| |||||||||| |||||| |||||||||||||    
T  48570109 tacagcttctggtgattctcagcttctgataaaattgcttatgatgaacttgtttctgatgacgtcatcatttcaggagcactt 48570026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 21702820 - 21702880
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  21702820 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 21702880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 35040172 - 35040232
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || ||||||||||||||||||||  |||||||||||||||||||    
T  35040172 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt 35040232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 46088995 - 46089055
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  46088995 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 46089055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 10250992 - 10251045
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaa 58  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  10250992 aaacagagtagtggagataatggttgtacacttcgtacaaacgtactatgtcaa 10251045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 30893352 - 30893400
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||||||||||||||| |||||| |||| ||||    
T  30893352 acttcaggagcacttctcttcagatgcttcaagtttcctctttgttgat 30893400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 2327509 - 2327454
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    ||||||||||| || ||||||||||||||||||||  |||||||||||| ||||||    
T  2327509 gagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctctt 2327454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 46089224 - 46089267
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcacttc 288  Q
    ||||||||||| |||||||||| |||||||||||||||||||||    
T  46089224 tgatgaacttgcttctgatgacgtcatcacttcaggagcacttc 46089267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 18896665 - 18896559
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    |||||||||| || |||||||||||||||||||| ||| ||||  ||||| ||| |        ||||||||||||||||||| ||| |||||||||| |    
T  18896665 agtagtggaggtagtggttgtacacttcgtacaactgtccttttccaacgttctccaaagact-aagcatccaatgccttcaaattcttttgaattagcc 18896567  T
Q  111 gttgcttc 118  Q
    ||||||||    
T  18896566 gttgcttc 18896559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 20954242 - 20954196
Alignment:
Q  275 ttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||    
T  20954242 ttcaggagcacttctcttcagatgcttcaagcttcctttttgttgat 20954196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 296
Target Start/End: Complemental strand, 12613628 - 12613579
Alignment:
Q  247 atgaacttgattctgatgacatcatcacttcaggagcacttctcttcaga 296  Q
    ||||||||| |||||||||| ||||||||||||||||||||  |||||||    
T  12613628 atgaacttgcttctgatgacgtcatcacttcaggagcacttgacttcaga 12613579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 12284729 - 12284777
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||||||||| |||||  |||||||||| ||||    
T  12284729 acttcaggagcacttctcttcagatgtttcaagcttcctttttgttgat 12284777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 14263525 - 14263465
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || ||||||||||||||||||||  || ||||| ||||||||||    
T  14263525 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtgctttgccaacgctctt 14263465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 21204997 - 21204937
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||  || ||||||||||||||||||||  ||||| |||||||||||||    
T  21204997 aaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 21204937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 42284642 - 42284694
Alignment:
Q  13 tagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||||||| || ||||||||||||||||||||  ||||| |||||||||||||    
T  42284642 tagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 42284694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 44821619 - 44821559
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| | ||||||||||||||||||  ||||| ||||||| |||||    
T  44821619 aaacagagtagtggagatagtagttgtacacttcgtacaaacgtactatgtcaacactctt 44821559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 7745159 - 7745104
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    ||||||||||| || ||||||||||||| ||| ||  |||||||||||||||||||    
T  7745159 gagtagtggaggtagtggttgtacactttgtataaacgtactttgtcaacgctctt 7745104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 16235100 - 16235053
Alignment:
Q  274 cttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||| ||||||||||||||  |||||||||| ||||    
T  16235100 cttcaggagcacttcttttcagatgcttcaagcttcctttttgttgat 16235053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 21984607 - 21984662
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    ||||||||||  || ||||||||||||||||||||  ||||| |||||||||||||    
T  21984607 gagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 21984662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 321
Target Start/End: Original strand, 36134465 - 36134512
Alignment:
Q  274 cttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||| ||||||||||||||||||||  |||||||||| ||||    
T  36134465 cttcaggagcgcttctcttcagatgcttcaagcttcctttttgttgat 36134512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 2327260 - 2327218
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| |||||||||||| |||||||    
T  2327260 tgatgaacttgcttctgatgacgtcatcacttcagaagcactt 2327218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 223
Target Start/End: Original strand, 12284648 - 12284678
Alignment:
Q  193 cttctgatgaacttcagcttctggtgatctt 223  Q
    |||||||||||||||||||||||||||||||    
T  12284648 cttctgatgaacttcagcttctggtgatctt 12284678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 12284684 - 12284726
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| |||||||||||| |||||||    
T  12284684 tgatgaacttgcttctgatgacgtcatcacttcagaagcactt 12284726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 19215618 - 19215676
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctc 63  Q
    |||| |||||||| ||||| |||||||||||||||||||||   ||| |||||||||||    
T  19215618 aaacagagtagtgcagatagtggttgtacacttcgtacaatcacactatgtcaacgctc 19215676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 21029024 - 21029066
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| || ||||||| ||||||||||||||||||||    
T  21029024 tgatgaacttgcttttgatgacgtcatcacttcaggagcactt 21029066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 21703057 - 21703099
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||  ||||||||||||||||||||    
T  21703057 tgatgaacttgcttctgatgatgtcatcacttcaggagcactt 21703099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 23024794 - 23024852
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctc 63  Q
    |||| |||||||| ||||| ||||||||||||||||||||  | ||| |||||||||||    
T  23024794 aaacagagtagtgcagatagtggttgtacacttcgtacaaacgcactatgtcaacgctc 23024852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 23024989 - 23025031
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| |||||||||||| |||||||    
T  23024989 tgatgaacttgcttctgatgacgtcatcacttcagaagcactt 23025031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 42284847 - 42284889
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| |||||||||||| |||||||    
T  42284847 tgatgaacttgcttctgatgacgtcatcacttcagaagcactt 42284889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 44821396 - 44821354
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||| |||||| |||||||||| ||||||||||||||||||||    
T  44821396 tgataaacttgcttctgatgacgtcatcacttcaggagcactt 44821354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 7309830 - 7309871
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtact 51  Q
    ||||| ||||| || |||||||||||||||||||||||||||    
T  7309830 gagtattggaggtagtggttgtacacttcgtacaattgtact 7309871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 21121138 - 21121078
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||  || ||||||||||| ||||||||  ||||| |||||||||||||    
T  21121138 aaacagagtagtggaagtagtggttgtacacgtcgtacaaacgtactatgtcaacgctctt 21121078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 21135234 - 21135174
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||  || ||||||||||||||||||||  ||||| ||||||| |||||    
T  21135234 aaacagagtagtggatttagtggttgtacacttcgtacaaacgtactatgtcaacactctt 21135174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 21683201 - 21683157
Alignment:
Q  75 aagcatccaatgccttcaacttcatttgaattagtcgttgcttca 119  Q
    ||||||||||||||||| | ||| |||||| ||||||||||||||    
T  21683201 aagcatccaatgccttctaattcctttgaaatagtcgttgcttca 21683157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 22154164 - 22154212
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||||||| |||||||  ||| |||||| ||||    
T  22154164 acttcaggagcacttctcttcagacgcttcaagcttcatttttgttgat 22154212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 25448383 - 25448343
Alignment:
Q  247 atgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||| |||||||||| ||||||||||||||| ||||    
T  25448383 atgaacttgcttctgatgacgtcatcacttcaggagtactt 25448343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 37642254 - 37642314
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||  || ||||||||||||||||| ||  ||||| |||||||||||||    
T  37642254 aaacagagtagtggaagtagtggttgtacacttcgtataaacgtactatgtcaacgctctt 37642314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 4e-72; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 25 - 287
Target Start/End: Original strand, 33082876 - 33083135
Alignment:
Q  25 tggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctc 124  Q
    ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| | | ||  || ||||||||||||||||||     
T  33082876 tggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactctt 33082974  T
Q  125 ctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcttt 224  Q
    |||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||||| ||||||||||||||||||||||||||  |    
T  33082975 ctgatcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatc--t 33083072  T
Q  225 tgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    || |||||||||| ||| |  |||||||||| |||| ||||| ||||||||||| ||||||||    
T  33083073 tgcttctgatgagttgcttcagatgaacttgtttctaatgacgtcatcacttcaagagcactt 33083135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 39693530 - 39693815
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||| | | ||    
T  39693530 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatccaatgctttcaaatccttt 39693628  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || ||||| |||||||||||| |   ||||||||||||||||||||||||  |||||| |||||| |||||||||||||||||||  ||||| |||||    
T  39693629 caaaatagtcattgcttcactcttccagtcttctgcaatgcttagacgagattgaatccattgaacaacctttgaagctttaagtcttgcatctcctgat 39693728  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    || || || ||||||||||||||  | ||||||||| |||| | ||||||||||| |||||||||| ||||||||||||| ||||||    
T  39693729 gagctacaacttctggtgatcttcagcttctgatgacatgcttttgatgaacttgtttctgatgacgtcatcacttcaggtgcactt 39693815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 17701740 - 17702057
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||||||| || |||||||| ||||||||||||| ||||||| ||||||||||         | ||||||||||||||||| | | ||    
T  17701740 acacaaactgagtagtggaggtagtggttgtaaacttcgtacaattatactttgccaacgctcttaaaggaatta-gcatccaatgccttcaaatccttt 17701838  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||| ||||||||||||| |||||||||||||||||||||||||||| |||| || |||||| ||||||||||||||||||||||||||||||||    
T  17701839 caaaatagttgttgcttcactcttctgatcttctgcaatgcttagacgagattaaattcattgaacaacctttgaagctttaagtctctcatcttctgat 17701938  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgct 300  Q
    ||||||||||||||||||||| | || |||||| ||| ||| | ||||||||||| ||| |  | |||  | ||||||| ||||||||||||||||||||    
T  17701939 gaacttcagcttctggtgatcatctgcttctgaagaggtgcttctgatgaacttgcttcaggag-cat-ttgacttcagaagcacttctcttcagatgct 17702036  T
Q  301 tcaattttcctttttgatgat 321  Q
    ||||  |||||||||| ||||    
T  17702037 tcaagcttcctttttgttgat 17702057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 18321315 - 18321011
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||| |||| | | ||    
T  18321315 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgcccttcaaagaa-caagcatccaatgccctcaaatccttt 18321217  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||  |||||||||||||  || |||  ||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||||| |||||    
T  18321216 gaaaatagctgttgcttcactcttttggtctcatgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgat 18321117  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgct 300  Q
    ||||||||||||||||||||||| |  ||||||||||||||               |||||||||| |||||||||||||||||||||||||||||||||    
T  18321116 gaacttcagcttctggtgatcttctacttctgatgagatgc---------------ttctgatgacgtcatcacttcaggagcacttctcttcagatgct 18321032  T
Q  301 tcaattttcctttttgatgat 321  Q
    ||||  ||| |||||| ||||    
T  18321031 tcaagcttcttttttgttgat 18321011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 16681459 - 16681176
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||| | |||||| ||||||||||||||||||||||||||| ||||||||||||||       |||||||| ||||||||||| | | ||    
T  16681459 acacaaactgagtactagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaa-caagcatctaatgccttcaaatccttt 16681361  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || ||| |||||||||||||| |   |||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||  ||||| |||||    
T  16681360 caaactagacgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctctaagtcttgcatctcctgat 16681261  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||| ||||||| ||||||  ||| || ||||||||||| | ||||||||||| |||||||||| ||||||||||| ||||||||    
T  16681260 gaactttagcttctagtgatc--ttgcttatgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcatgagcactt 16681176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 5 - 286
Target Start/End: Original strand, 19943234 - 19943516
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || |||||||||||||||||||||| ||||||||||||||| ||        |||||||||||||||||||| | | ||  ||    
T  19943234 aaacagagtagtggaggtagtggttgtacacttcgtacaattttactttgtcaacgctttttaaaggaacaagcatccaatgccttcaaatcctttcaaa 19943333  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagccttt-gaagctttaagtctctcatcttctgatgaa 203  Q
     |||| ||||||||||||| |   |||||||||||||||||||||||| ||||||| |||| ||||||| ||||||||||||||  ||||| ||||||||    
T  19943334 atagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaatagccttttgaagctttaagtcttgcatctcctgatgaa 19943433  T
Q  204 cttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcact 286  Q
    ||||||||||| ||||||||| | |||||||||||||| | ||||||||||| ||| |||| | |||||||||||||||||||    
T  19943434 cttcagcttctagtgatctttagcttctgatgagatgcttctgatgaacttgcttccgatgtcgtcatcacttcaggagcact 19943516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 19156191 - 19156425
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||       |||||||||||||||||||| | | ||    
T  19156191 acacaaactgagtagtggagatagtggttgtacatttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatccaatgccttcaaatccttt 19156289  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      ||||||||||||||||||||| ||  ||||||||||||| |||||||||| ||||||| |||||||||||||||||||||| |||  |||||  ||||    
T  19156290 caaattagtcgttgcttcactcttctagtcttctgcaatgcatagacgagattaaatccattgaacagcctttgaagctttaattcttgcatctcttgat 19156389  T
Q  201 gaacttcagcttctggtgatcttttgattctgatga 236  Q
    ||||| || ||||||||||||||  | |||||||||    
T  19156390 gaactacaacttctggtgatcttcagcttctgatga 19156425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 29693310 - 29693595
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||       ||||||| |||||| ||||| | | ||    
T  29693310 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaaagctcttcaaagaa-caagcatacaatgctttcaaatccttt 29693408  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||| |||||||||||||     |||||||||||||||||||||||| |||| || | ||||| ||||| ||||||||||||  ||||| || ||    
T  29693409 caaaatagtggttgcttcactctttcagtcttctgcaatgcttagacgagattaaattcattaaacagtctttggagctttaagtcttgcatctcctaat 29693508  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||| || ||| ||||||||||  | || ||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||||    
T  29693509 gaactacaacttatggtgatcttcagcttatgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 29693595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 19707501 - 19707783
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||| |||  || |||||||||||||||||||||||||||||||||||| |||||       ||| ||| |||||||||||| ||||||    
T  19707501 acacaaactgagtagaggatgtagtggttgtacacttcgtacaattgtactttgtcaacgttcttcaaagaa-caaccattcaatgccttcaaattcatt 19707599  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    |||||||| |||||||||||||| ||| |||||||||||| ||||    ||| || |||  |||||||||||||||||||||| ||| ||||||||||||    
T  19707600 tgaattagccgttgcttcactcttctggtcttctgcaatg-ttaggaatgattaagtcctttgaacagcctttgaagctttaattctttcatcttctgat 19707698  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    || ||||||||||||| ||||  ||| |||| ||||| ||| | | ||||||||| |||||||||  ||||||||||||||||||||    
T  19707699 gatcttcagcttctggcgatc--ttgcttctaatgaggtgcttctaatgaacttgcttctgatgatgtcatcacttcaggagcactt 19707783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 5 - 264
Target Start/End: Original strand, 16207305 - 16207563
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| | | ||  ||    
T  16207305 aaacagagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaa 16207403  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||| ||||||| ||||| |   |||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||  ||||| |||||||||    
T  16207404 atagtagttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcgtttgaagctttaagtcttgcatctcctgatgaac 16207503  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatg 264  Q
    |  ||||||||||||||||| | |||| ||||||||| | |||| |||||| ||| ||||    
T  16207504 tagagcttctggtgatctttagcttctaatgagatgcttctgataaacttgcttcagatg 16207563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 20382550 - 20382267
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||       ||| |||||| | | ||||| | | ||    
T  20382550 acacaaactgattagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaa-caaacatccactactttcaaatccttt 20382452  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
       | ||| |||||||||||||  ||  |||| |||||||| | ||||||||  |||||| ||||||||||||||||||||||| ||  ||||| |||||    
T  20382451 cagaatagccgttgcttcactcctctagtcttttgcaatgcatggacgagattgaatccattgaacagcctttgaagctttaagacttgcatctcctgat 20382352  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||||||||||||||||  ||| |||||||||||||| | ||||||||||| || ||||||| ||||||||||||||||||||    
T  20382351 gaacttcagcttctggtgatc--ttgcttctgatgagatgcttctgatgaacttgcttttgatgacgtcatcacttcaggagcactt 20382267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 24646333 - 24646617
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||        ||||||||||||||| ||| | | ||    
T  24646333 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacactcttcaaagaat-aagcatccaatgcctgcaaatccttt 24646431  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||  |||||| ||||||  |  |||| ||||||||||||||||||| ||||| | |||||| ||||||||||||||| |||  |||||  ||||    
T  24646432 caaaatagctgttgctacactcttttagtcttatgcaatgcttagacgagattaaatcaattgaacaacctttgaagctttaactcttgcatctcttgat 24646531  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcact 286  Q
    |||||  ||||||||||||||||  | ||||||| |||||| | ||||||||||| |||||||||| |||||||||||| ||||||    
T  24646532 gaactagagcttctggtgatcttcagcttctgataagatgcttctgatgaacttgcttctgatgacgtcatcacttcagaagcact 24646617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 16188979 - 16189262
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||| | ||||    
T  16188979 acacatactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttagaagaat-aagcatccaatgccttcaaat-catt 16189076  T
Q  101 tgaat-tagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctga 199  Q
    | ||  |||||||||||||||||| |   |||||||||||| || |||||||| ||||||| | |||| |||||||||||||||||||  ||||| || |    
T  16189077 tcaaaatagtcgttgcttcactcttccagtcttctgcaatggttggacgagattaaatccattaaacaacctttgaagctttaagtcttgcatctcctaa 16189176  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||| |||||||||||||  ||| |||| ||||||| | | ||||||||||| |||||||||  ||||||||  ||||||||||    
T  16189177 tgaacttcggcttctggtgatc--ttgcttctaatgagatacttctgatgaacttgcttctgatgatgtcatcactctaggagcactt 16189262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 602876 - 602654
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||| | | ||    
T  602876 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatccaatgctttcaaatccttt 602778  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || ||||| |||||||||||| |   ||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||||  ||| | |||||    
T  602777 caaaatagtcattgcttcactcttcaagtcttctgcaatgcttagacgagattgaatccaatgaacaacctttgaagttttaagtcttgcatttcctgat 602678  T
Q  201 gaacttcagcttctggtgatcttt 224  Q
    |||||| ||||||| |||||||||    
T  602677 gaactttagcttcttgtgatcttt 602654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 17525885 - 17525592
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||       |||||||||||||| ||||| | | ||    
T  17525885 acacaaactgagtagtgaagatagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaa-caagcatccaatgctttcaaatccttt 17525787  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagccttt-gaagctttaagtctctcatcttctga 199  Q
      || |||| |||| |||||||| |   ||||||||| ||||||||||| || ||||||| |||||| ||||| |||| |||||||||  ||||| ||||    
T  17525786 caaaatagttgttgtttcactcttccagtcttctgcagtgcttagacgatattaaatccattgaacaaccttttgaagatttaagtcttgcatctcctga 17525687  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatc-atcacttcaggagcacttctcttcag 295  Q
    |||||| ||| |||||||||||  ||| |||||||||||||| | ||| ||||||| |||||||||  || |||||||||||||||||| |||||||    
T  17525686 tgaactacagtttctggtgatc--ttgcttctgatgagatgcttctgacgaacttgcttctgatgatgtcaatcacttcaggagcacttgtcttcag 17525592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 12757919 - 12757698
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| | | ||    
T  12757919 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttc-aaagaacaagcatccaatgccttcaaatccttt 12757821  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||| |||||||||||||     |||||||||||||||||||||||| ||||||| |||||| ||||| ||| |||||||||  ||||| |||||    
T  12757820 caaaatagttgttgcttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacatcctttaaagttttaagtcttgcatctcctgat 12757721  T
Q  201 gaacttcagcttctggtgatctt 223  Q
    |||||  |||| |||||||||||    
T  12757720 gaactagagctactggtgatctt 12757698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 3 - 287
Target Start/End: Original strand, 17914456 - 17914739
Alignment:
Q  3 acaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttg 102  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||| | | ||      
T  17914456 acaaattgagtagtggagatagtggttatacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatctaatgccttcaaatcctttca 17914554  T
Q  103 aattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatga 202  Q
    || |||| |||||||||||||     |||||||||||||||||||||||| ||||||| |||||| | ||||||||||||| |||  || || || ||||    
T  17914555 aaatagttgttgcttcactcttacagtcttctgcaatgcttagacgagattaaatccattgaacaacttttgaagctttaactcttgcaactcctaatga 17914654  T
Q  203 acttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
     || || ||||| ||||||||  | |||||||||||||| | ||||||||||| |||| ||||| |||| |||||| ||||||||    
T  17914655 gctacaacttctagtgatcttcagcttctgatgagatgcttctgatgaacttgcttctaatgacgtcattacttcaagagcactt 17914739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 18718996 - 18719217
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||       |||||||||||||| ||||| | |  |    
T  18718996 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactatgacaacgctcttcaaagaa-caagcatccaatgctttcaaatcctat 18719094  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||||  ||| |||| ||||||||||  |||||||  |||||| |||||||||||||||||| |||||||  ||||||||||     
T  18719095 caaaatagtcgttgcttcactcctctggtcttttgcaatgcttgaacgagattgaatccactgaacagcctttgaagctctaagtcttgcatcttctgaa 18719194  T
Q  201 gaacttcagcttctggtgatctt 223  Q
    |||||| ||||||||||||||||    
T  18719195 gaacttaagcttctggtgatctt 18719217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 129 - 321
Target Start/End: Original strand, 22745609 - 22745801
Alignment:
Q  129 tcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgat 228  Q
    |||||| ||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||||| ||||||||||  ||||||||||||||||  | |    
T  22745609 tcttctacaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactagagcttctggtgatcttcagct 22745708  T
Q  229 tctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||| | ||||||||||| |||||| ||| ||||||||||| |||||||||||||||||  ||| ||  |||||||||| ||||    
T  22745709 tctgatgagatgcttctgatgaacttgcttctgacgacgtcatcacttcatgagcacttctcttcagacactttaagcttcctttttgttgat 22745801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 12 - 283
Target Start/End: Complemental strand, 23263757 - 23263488
Alignment:
Q  12 gtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcg 111  Q
    ||||||||| || |||||||||||||||||||| ||||||||||||||||||||        ||| |||||||||||||||| | | ||  || |||||     
T  23263757 gtagtggaggtagtggttgtacacttcgtacaactgtactttgtcaacgctctt-tgaagaacaaacatccaatgccttcaaatcctttcaaaatagtca 23263659  T
Q  112 ttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagct-ttaagtctctcatcttctgatgaacttcagc 210  Q
    ||| |||||||| ||  ||||||||| || ||||||||||| ||||| | |||||| ||||||||| | |||||| |  ||||| |||||||||||||||    
T  23263658 ttgtttcactcttctagtcttctgcattgtttagacgagattaaatctattgaacaacctttgaagttcttaagttttgcatctcctgatgaacttcagc 23263559  T
Q  211 ttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagc 283  Q
    ||||| |||||||  | |||||||||| ||| | ||||||||||| |||||||||| ||||||||||||||||    
T  23263558 ttctgatgatctt--gcttctgatgaggtgcttctgatgaacttgcttctgatgacgtcatcacttcaggagc 23263488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 17267473 - 17267751
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||| |||||| |||||||       |||||||| ||||| ||||| | | ||  ||    
T  17267473 aaactgagtagtggagatagtggttgtacaattcgtacaattgtactatgtcaatgctcttcaaagaa-caagcatctaatgctttcaaatcctttcaaa 17267571  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||  ||||||||||||    | |||| |||||||||| ||||||||  || ||| |||||| |||||||||||||||||||  |||||  ||||||||    
T  17267572 atagctgttgcttcactcctgcggtcttttgcaatgcttggacgagattgaa-ccattgaacaacctttgaagctttaagtcttgcatctcttgatgaac 17267670  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||||||||||||  ||| |||||||||||||| | ||||||||||| |||| || || |||||||||||| |||||||    
T  17267671 ttcagcttctggtgatc--ttgcttctgatgagatgcttttgatgaacttgcttctaataacgtcatcacttcagaagcactt 17267751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 43644891 - 43645090
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||| ||||||||||| || ||||||||||||||||||||||||||||| | ||||||||||       |||||||||||||||||||| ||||||    
T  43644891 acacaaaccgagtagtggaggtagtggttgtacacttcgtacaattgtactttattaacgctcttcaaagaa-caagcatccaatgccttcaaattcatt 43644989  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    |||||||| |||| ||||||||| ||| ||||||||||||| ||| || ||| |||||   |||||| ||||||||||||| | |||||||||||| |||    
T  43644990 tgaattagccgtttcttcactcttctggtcttctgcaatgc-taggcgtgattaaatcatttgaacaacctttgaagctttgattctctcatcttccgat 43645088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 30 - 241
Target Start/End: Complemental strand, 18121236 - 18121026
Alignment:
Q  30 gtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctcctgat 129  Q
    |||||||||||||||||||||||||| || ||||||        ||||||||||||||||| || | | ||  || |||  ||||||||||||| ||  |    
T  18121236 gtacacttcgtacaattgtactttgttaatgctctt-tgaagaacaagcatccaatgcctttaaatcctttcaaaatagcagttgcttcactcttctagt 18121138  T
Q  130 cttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgatt 229  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||  ||||| ||||||||||  ||||||||||||||||| | ||    
T  18121137 cttctgcaatgcttagacgagattaaatccattgaacagcctttgaaactttaagtcttgcatctcctgatgaactagagcttctggtgatctttagctt 18121038  T
Q  230 ctgatgagatgc 241  Q
    ||||||||||||    
T  18121037 ctgatgagatgc 18121026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 17441963 - 17441716
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||        ||||||||||||| ||||| | | ||    
T  17441963 acacaaaatgagtagtggagatagtggttgtacacttagtacaattgtactttgtcaacgctcttcaaagaat-aagcatccaatgc-ttcaaatccttt 17441866  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||| | ||| |   |||||||||||||||||| ||||| || |||| |||||| ||||| |||||||||||||  ||||| |||||    
T  17441865 caaaatagtcgttgctttagtcttccagtcttctgcaatgcttagaggagattaagtccattgaacaacctttaaagctttaagtcttgcatctcctgat 17441766  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatga 250  Q
    |||||  ||||||||||||||||  | ||||||| |||||| | ||||||    
T  17441765 gaactagagcttctggtgatcttcagcttctgattagatgcttctgatga 17441716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 18679810 - 18680031
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||       |||||||||||||| ||||| | |  |    
T  18679810 acacaaactgagtagtagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttc-aaagaacaagcatccaatgctttcaaatcctat 18679908  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||| ||||  ||| |||| |||||||||||||||||||  |||||| |||||  ||||||||||| |||||||  |||||||||||    
T  18679909 caaaatagtcgttgctttactcctctggtcttttgcaatgcttagacgagattgaatccactgaactacctttgaagctctaagtcttgcatcttctgat 18680008  T
Q  201 gaacttcagcttctggtgatctt 223  Q
    ||| |  ||||||| ||||||||    
T  18680009 gaaatgaagcttctagtgatctt 18680031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 30421581 - 30421368
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnn-caagcatccaatgccttcaacttcatttga 103  Q
    |||| ||||||||||| || |||||||| |||||||||||| |||||||||||||||||||         |||||||||||||||||||| | ||||  |    
T  30421581 aaacagagtagtggaggtagtggttgtaaacttcgtacaat-gtactttgtcaacgctctttgaaaagaacaagcatccaatgccttcaaatccattcaa 30421483  T
Q  104 attagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaa 203  Q
    | |||||||||||||||| | |   |||||||||||||||||||||||| ||||||| |||||||||||||||||||||  | |  ||||||||||||||    
T  30421482 actagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagcttta--tgttgcatcttctgatgaa 30421385  T
Q  204 cttcagcttctggtgat 220  Q
    || ||||||||||||||    
T  30421384 ctgcagcttctggtgat 30421368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 7 - 287
Target Start/End: Original strand, 21932884 - 21933164
Alignment:
Q  7 actgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaatt 106  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||        ||||||| ||||||||| || | | ||  || |    
T  21932884 actgagtagtggaggtagtggttgtacacttcgtacaattttactttgtcaacgctctt-tgaaaaacaagcatacaatgcctttaaatcctttcaaaat 21932982  T
Q  107 agtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaactt 206  Q
    || ||||| ||||||||     |||| ||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||||| |||||||| |     
T  21932983 agccgttgtttcactctttcagtcttatgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaaata 21933082  T
Q  207 cagcttctggtgatcttttgattctgatg-agatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
     ||||||||||||| ||  | |||||||| |  ||| | |||| |||||  |||||||||| ||| ||||||||||||||||    
T  21933083 gagcttctggtgattttcagcttctgatgaacttgcttctgataaacttccttctgatgacgtcaccacttcaggagcactt 21933164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 23185378 - 23185166
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||| ||||||| || |||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||| | | ||  ||    
T  23185378 aaacagagcagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaat-aagcatccaatgccttcaaatcctttcaaa 23185280  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||||||||||||||| | |   |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||  | |  ||||| |||||||||    
T  23185279 ctagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagcttta--tgttgcatctcctgatgaac 23185182  T
Q  205 ttcagcttctggtgat 220  Q
    | ||||||||||||||    
T  23185181 tgcagcttctggtgat 23185166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 74 - 287
Target Start/End: Complemental strand, 20255649 - 20255439
Alignment:
Q  74 caagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagccttt 173  Q
    |||||||||||||||||||| | | ||  || |||||||||||||||| | |   ||||||| |||||||||||||||| ||||||| ||||||||||||    
T  20255649 caagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgtaatgcttagacgagattaaatccattgaacagccttt 20255550  T
Q  174 gaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatca 273  Q
    || |||||||||||  ||   ||| |||| ||| | ||||||||||||||  | |||||||||||| | | ||||||||||  || ||||||| ||||||    
T  20255549 gacgctttaagtcttgca---tctaatgagctttatcttctggtgatcttcagcttctgatgagatacttctgatgaacttccttatgatgacgtcatca 20255453  T
Q  274 cttcaggagcactt 287  Q
    ||||||||||||||    
T  20255452 cttcaggagcactt 20255439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 17797421 - 17797701
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| | | ||  ||    
T  17797421 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaagcatccaatgccttcaattcctttcaaa 17797519  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     ||| |||||| ||||| | |   ||||||| |||| |||||||||||  |||||| |||||| | ||||| ||||||||  |  ||||| ||||||| |    
T  17797520 ctagccgttgcatcacttttccagtcttctgtaatggttagacgagattgaatccattgaacaacttttgaggctttaag--ttgcatctcctgatgagc 17797617  T
Q  205 ttcagcttctggtgatcttttgattctgatg-agatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    | |||||||||||||| ||  | |||||||| |  ||| | ||||||| ||| |||||||||| ||| || |||||||||||||    
T  17797618 tgcagcttctggtgattttcagcttctgatgaacttgcttctgatgaatttgcttctgatgacgtcaccatttcaggagcactt 17797701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 5 - 207
Target Start/End: Complemental strand, 18722798 - 18722597
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||        ||||||| ||||||||||| ||| ||  ||    
T  18722798 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaat-aagcatctaatgccttcaaattctttcaaa 18722700  T
Q  105 ttagtcgttgcttcactctcctgatcttc-tgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaa 203  Q
     |||||||||||||||||| ||  ||||| |||||||| ||| || ||| ||||||  ||||||| ||||||||| |||| ||| ||||||||||||||     
T  18722699 atagtcgttgcttcactcttcttgtcttcttgcaatgc-tagccgtgattaaatcctttgaacagtctttgaagcattaactctttcatcttctgatgat 18722601  T
Q  204 cttc 207  Q
    ||||    
T  18722600 cttc 18722597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 5 - 207
Target Start/End: Complemental strand, 18731143 - 18730942
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||        ||||||| ||||||||||| ||| ||  ||    
T  18731143 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaat-aagcatctaatgccttcaaattctttcaaa 18731045  T
Q  105 ttagtcgttgcttcactctcctgatcttc-tgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaa 203  Q
     |||||||||||||||||| ||  ||||| |||||||| ||| || ||| ||||||  ||||||| ||||||||| |||| ||| ||||||||||||||     
T  18731044 atagtcgttgcttcactcttcttgtcttcttgcaatgc-tagccgtgattaaatcctttgaacagtctttgaagcattaactctttcatcttctgatgat 18730946  T
Q  204 cttc 207  Q
    ||||    
T  18730945 cttc 18730942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 207
Target Start/End: Complemental strand, 18685549 - 18685348
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||        ||||||| ||||||||||| ||| ||  ||    
T  18685549 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttcaaaaaat-aagcatctaatgccttcaaattctttcaaa 18685451  T
Q  105 ttagtcgttgcttcactctcctgatcttc-tgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaa 203  Q
     |||| ||||||||||||| ||| ||||| |||||||| |||||| ||| | ||||  ||||||| ||||||||| |||| ||| | ||||||||||||     
T  18685450 atagttgttgcttcactcttctggtcttcttgcaatgc-tagacgtgattatatcctttgaacagtctttgaagcattaactcttttatcttctgatgat 18685352  T
Q  204 cttc 207  Q
    ||||    
T  18685351 cttc 18685348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 15336240 - 15336028
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||  |||||||||||||||||||         ||||||||||||||||||| | | ||  ||    
T  15336240 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt-tgacgaataagcatccaatgccttcaaatcctttcaaa 15336142  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||||||||||||||| ||    |||||||||||  ||||||||| |  | |||| | |||| | ||||||||||||||  |  ||||| |||||||||    
T  15336141 atagtcgttgcttcactttctcagtcttctgcaatctttagacgagtttgattccattaaacaacttttgaagctttaag--ttgcatctcctgatgaac 15336044  T
Q  205 ttcagcttctggtgat 220  Q
    | ||||||||||||||    
T  15336043 tacagcttctggtgat 15336028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 15425305 - 15425093
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||  |||||||||||||||||||         ||||||||||||||||||| | | ||  ||    
T  15425305 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt-tgacgaataagcatccaatgccttcaaatcctttcaaa 15425207  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||||||||||||||| ||    |||||||||||  ||||||||| |  | |||| | |||| | ||||||||||||||  |  ||||| |||||||||    
T  15425206 atagtcgttgcttcactttctcagtcttctgcaatctttagacgagtttgattccattaaacaacttttgaagctttaag--ttgcatctcctgatgaac 15425109  T
Q  205 ttcagcttctggtgat 220  Q
    | ||||||||||||||    
T  15425108 tacagcttctggtgat 15425093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 15516609 - 15516397
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||  |||||||||||||||||||         ||||||||||||||||||| | | ||  ||    
T  15516609 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt-tgacgaataagcatccaatgccttcaaatcctttcaaa 15516511  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||||||||||||||| ||    |||||||||||  ||||||||| |  | |||| | |||| | ||||||||||||||  |  ||||| |||||||||    
T  15516510 atagtcgttgcttcactttctcagtcttctgcaatctttagacgagtttgattccattaaacaacttttgaagctttaag--ttgcatctcctgatgaac 15516413  T
Q  205 ttcagcttctggtgat 220  Q
    | ||||||||||||||    
T  15516412 tacagcttctggtgat 15516397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 9320567 - 9320849
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || |||||||||||||||||||| | ||||||||||||||||||         ||||||||||||| ||||| | | ||  ||    
T  9320567 aaacagagtagtggaggtagtggttgtacacttcgtacaaatatactttgtcaacgctcttttgaagaataagcatccaatgcgttcaaatcctttcaaa 9320666  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaa-tgaacagcctttgaagctttaagtctctcatcttctgatgaa 203  Q
     || | ||||||||||| | |   |||||||||||  ||||||||| |  ||||||| | |||||| |||||||| |||||  |  |||| |||||||||    
T  9320667 ataattgttgcttcacttttccagtcttctgcaatctttagacgaggttgaatccaattaaacagcttttgaagccttaag--ttgcatcctctgatgaa 9320764  T
Q  204 cttcagcttctggtgatcttttgattctgat-gagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    || |||||||||||||| ||| | |||||||  |  ||| | ||||||||| | |||||||||| ||| |||| ||| |||||||    
T  9320765 ctgcagcttctggtgatttttagcttctgataaacttgcttctgatgaactcgcttctgatgacgtcaccactacagaagcactt 9320849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 209
Target Start/End: Complemental strand, 22461783 - 22461588
Alignment:
Q  12 gtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcg 111  Q
    |||||||||||| ||||||| |||| ||||||||||| |||| ||||| |||| |        ||||||||||||||||||| | |||||||||||||||    
T  22461783 gtagtggagatagtggttgtgcactccgtacaattgtcctttttcaactctctccaacgaat-aagcatccaatgccttcaaatccatttgaattagtcg 22461685  T
Q  112 ttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
    |||||||| ||| ||  ||||||||||||  ||  | |||| ||||||   ||||| |||||||||||| || ||  ||| |||||||||| ||||||    
T  22461684 ttgcttcattcttctagtcttctgcaatg-atatgctagattaaatccttcgaacaacctttgaagcttaaattcgttcagcttctgatgatcttcag 22461588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 209
Target Start/End: Complemental strand, 19956482 - 19956289
Alignment:
Q  16 tggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgttgc 115  Q
    ||||| || |||||||||| || |||||||||| |||| ||||||||||||        ||| ||||||||||||||| | | || ||||||||||||||    
T  19956482 tggaggtagtggttgtacaattagtacaattgtcctttttcaacgctcttcaatgaaa-aagtatccaatgccttcaaatcctttagaattagtcgttgc 19956384  T
Q  116 ttcactctcctgatcttctgcaatgcttagacgagatcaaatcc-aatgaacagcctttgaagctttaagtc-tctcatcttctgatgaacttcag 209  Q
    |||||||| |||||||||| |||| | ||| |||| | ||||||   |||||||  ||||||||||||| || ||||| |||||||||| ||||||    
T  19956383 ttcactcttctgatcttctacaatac-taggcgaggttaaatccttttgaacagtatttgaagctttaattcttctcagcttctgatgatcttcag 19956289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25164065 - 25164130
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttc 66  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||| || |||| ||||||    
T  25164065 acacaaattgagtagtggagatagtggttgtacacttcgtacaattgtactatgacaacactcttc 25164130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 40845539 - 40845479
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  40845539 aaacagagtagtggagatagtggttgtacacttcgtacaatcgtactatgtcaacgctctt 40845479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 185
Target Start/End: Original strand, 1237641 - 1237815
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    ||||||||||| || ||||||||||||||| ||||  |||||||||||||||||||        |||  ||||||||||||||| | | ||  || ||||    
T  1237641 gagtagtggaggtagtggttgtacacttcgcacaaaagtactttgtcaacgctctt-tgaagaacaaatatccaatgccttcaaatcctttcaaaatagt 1237739  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagt 185  Q
    |||||||||||| | | | |||||||||||  ||||||||| |  |||||| | |||||| |||||||| ||||||    
T  1237740 cgttgcttcacttttccggtcttctgcaatctttagacgaggttgaatccattaaacagcttttgaagccttaagt 1237815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 22663120 - 22663175
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  22663120 gagtagtggagatattggttgtacacttcgtacaaacgtactatgtcaacgctctt 22663175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 22673783 - 22673837
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    ||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  22673783 agtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 22673837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 6407725 - 6407785
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||||||| ||  ||||| |||||||||||||    
T  6407725 aaacagagtagtggagatagtggttgtacacttcgtagaaacgtactatgtcaacgctctt 6407785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 14989603 - 14989543
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| |||||||||| |||||||||  ||||| |||||||||||||    
T  14989603 aaacagagtagtggagatagtggttgtacaattcgtacaaacgtactatgtcaacgctctt 14989543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 234
Target Start/End: Original strand, 24551279 - 24551499
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    |||||||||| || ||||||||||||||||||||  ||||| ||| |||||||||        |||||||||||||||||||| |   ||  || |||||    
T  24551279 agtagtggaggtagtggttgtacacttcgtacaaacgtactatgttaacgctctt-tgaagaacaagcatccaatgccttcaaatcttttcaaaatagtc 24551377  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagc 210  Q
    ||||||||||| | |   |||||||||||  ||||||||| |  |||||| | |||| | |||||||| |||||  |  ||||   ||||||||| ||||    
T  24551378 gttgcttcacttttccagtcttctgcaatctttagacgaggttgaatccattaaacaacttttgaagccttaag--ttgcatcccatgatgaactgcagc 24551475  T
Q  211 ttctggtgatcttttgattctgat 234  Q
    |||||||||| ||| | |||||||    
T  24551476 ttctggtgatttttggcttctgat 24551499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 18151594 - 18151552
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  18151594 tgatgaacttgcttctgatgacgtcatcacttcaggagcactt 18151552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 18680037 - 18680079
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  18680037 tgatgaacttgcttctgatgacgtcatcacttcaggagcactt 18680079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 286
Target Start/End: Original strand, 22674015 - 22674056
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcact 286  Q
    ||||||||||| |||||||||| |||||||||||||||||||    
T  22674015 tgatgaacttgcttctgatgacgtcatcacttcaggagcact 22674056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 18151798 - 18151738
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| |||||||||| |||||||||  ||||| |||||| ||||||    
T  18151798 aaacagagtagtggagatagtggttgtacaattcgtacaaacgtactatgtcaatgctctt 18151738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 24551524 - 24551568
Alignment:
Q  243 tatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  24551524 tatgatgaactcgcttctgatgacgtcatcacttcaggagcactt 24551568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 45538591 - 45538531
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || ||||||||||||||||||||  ||  |||||||||||||||    
T  45538591 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtgatttgtcaacgctctt 45538531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 17525597 - 17525550
Alignment:
Q  274 cttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||| ||||||||||||||| ||| |||||| ||||    
T  17525597 cttcaggagcacttcttttcagatgcttcaatcttcatttttgttgat 17525550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 304
Target Start/End: Original strand, 19943519 - 19943550
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaa 304  Q
    ||||||||||||||||||||||||||||||||    
T  19943519 acttcaggagcacttctcttcagatgcttcaa 19943550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 19956252 - 19956213
Alignment:
Q  257 ttctgatgacatcatcacttcaggagcacttctcttcaga 296  Q
    |||||||||| |||||||||||||||||||| ||||||||    
T  19956252 ttctgatgacgtcatcacttcaggagcacttgtcttcaga 19956213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 287
Target Start/End: Complemental strand, 3598316 - 3598218
Alignment:
Q  190 catcttctgatgaacttcagcttctggtgatcttttgattctgatgagat-gcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||| |||||||||| || |||||||||||  |  | |||||||||  | || |||||||| |||| |||||| ||| ||||||||||||||||||||    
T  3598316 catctcctgatgaactacaacttctggtgattctcagcttctgatgaacttgcttatgatgaccttgcttctgacgacgtcatcacttcaggagcactt 3598218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 6407938 - 6407980
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| || ||||||| ||||||||||||||||||||    
T  6407938 tgatgaacttgcttttgatgacgtcatcacttcaggagcactt 6407980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 13430565 - 13430523
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| |||| |||||||||||||||    
T  13430565 tgatgaacttgcttctgatgacgtcattacttcaggagcactt 13430523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 14989389 - 14989347
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||||||||| ||||||||||    
T  14989389 tgatgaacttgcttctgatgacgtcatcactttaggagcactt 14989347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 19156420 - 19156462
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||  ||||||||||||||||||||    
T  19156420 tgatgaacttgcttctgatgatgtcatcacttcaggagcactt 19156462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 21288616 - 21288658
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| |||||||||||| |||||||    
T  21288616 tgatgaacttgcttctgatgacgtcatcacttcagaagcactt 21288658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 36105447 - 36105489
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||| |||| |||||||||| ||||||||||||||||||||    
T  36105447 tgatgaccttgcttctgatgacgtcatcacttcaggagcactt 36105489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 40845302 - 40845260
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||| |||| |||||||||| ||||||||||||||||||||    
T  40845302 tgatgaccttgcttctgatgacgtcatcacttcaggagcactt 40845260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 43640011 - 43640053
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||    
T  43640011 tgatgaacttgcttctgatgacgtcatcacttcatgagcactt 43640053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 287
Target Start/End: Complemental strand, 24832980 - 24832943
Alignment:
Q  250 aacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  24832980 aacttgcttctgatgacgtcatcacttcaggagcactt 24832943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 6407839 - 6407927
Alignment:
Q  129 tcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgat 220  Q
    ||||||||||| |||||||||| |  |||||  | |||||| |||||||||||||||  |  |||| |||||||||| ||||||||||||||    
T  6407839 tcttctgcaat-cttagacgagtttgaatcctttaaacagcttttgaagctttaagttgc--atctcctgatgaactgcagcttctggtgat 6407927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 13430780 - 13430720
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||  || ||||||||||||||||||||  ||||| ||||||| |||||    
T  13430780 aaacagagtagtggaagtagtggttgtacacttcgtacaaacgtactatgtcaacactctt 13430720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 16189282 - 16189330
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||| ||||||||||||||||| |||||||  |||||||||| ||||    
T  16189282 acttcaagagcacttctcttcagacgcttcaagcttcctttttgttgat 16189330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 19156465 - 19156513
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||||||| |||| ||  |||||||||| ||||    
T  19156465 acttcaggagcacttctcttcagacgctttaagcttcctttttgttgat 19156513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 43639782 - 43639842
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| |||||||||||||||| |||  |||   |||||||||||||    
T  43639782 aaacagagtagtggagatagtggttgtacacttcgtgcaaacgtaacatgtcaacgctctt 43639842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 45568053 - 45567993
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||| || || |||| ||||||||||||||   |||||||||||||||||||    
T  45568053 aaacagagtagtgaaggtagtggtcgtacacttcgtacagaagtactttgtcaacgctctt 45567993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 137; Significance: 2e-71; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 18729 - 18444
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||       |||| ||||||||||||||| | | ||    
T  18729 acacaaactgagtagtggagatagtggttgtacacttcgtaaaattgtactttgtcaacgctcttcaaagaa-caagtatccaatgccttcaaatccttt 18631  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||||| |   |||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||    ||| |||||    
T  18630 caaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaaatcttgtgtctcctgat 18531  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||| |||||||||||||||||  | || ||||||||||| | ||||||||||| |||||||||| ||||||||||| ||||||||    
T  18530 gaactgcagcttctggtgatcttcagcttatgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcatgagcactt 18444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 18441 - 18393
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  18441 acttcaggagcacttctcttcagatgcttcaagcttcctttttgttgat 18393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 26083 - 25764
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||| |||||| |||||||||||||| |||||||||||| ||||||| ||||||       |||||||||||||||||||| | | ||    
T  26083 acacaaactgagtagtcgagatagtggttgtacacttcatacaattgtactatgtcaaccctcttcaaagaa-caagcatccaatgccttcaaatccttt 25985  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||| | |   |||| ||||||||||||||||||| ||||||| |||||| ||||||| |||||||||||  ||||| |||||    
T  25984 caaaatagtcgttgcttcacttttccagtcttttgcaatgcttagacgagattaaatccattgaacaacctttgacgctttaagtcttgcatctcctgat 25885  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgct 300  Q
    || ||| ||||||||||||||||  | |||||||||||||  | | |||||| || |||||||||| ||||||||||||||||||||||||||||| ||     
T  25884 gagctttagcttctggtgatcttcagcttctgatgagatgtttttcatgaacgtgcttctgatgacgtcatcacttcaggagcacttctcttcagacgcc 25785  T
Q  301 tcaattttcctttttgatgat 321  Q
    | ||| |||||||||| ||||    
T  25784 ttaatcttcctttttgttgat 25764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 478 - 760
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||       |||||||||||||||||||| | | ||    
T  478 acacaacctgagtaatggagataatggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaa-caagcatccaatgccttcaaatccttt 576  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||| | |   |||||||||||||||||||||||| ||||| | |||||| ||||||| |||||||||||  ||||| |||||    
T  577 caaaatagtcgttgcttcactattccagtcttctgcaatgcttagacgagattaaatcaattgaacatcctttgacgctttaagtcttgcatctcctgat 676  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagca 284  Q
    || ||| ||||||||||||||||  | |||||||||||||| | |||| |||||| |||||||||| ||||||||||| |||||    
T  677 gagctttagcttctggtgatcttcagcttctgatgagatgcttctgataaacttgcttctgatgacgtcatcacttcatgagca 760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 286
Target Start/End: Complemental strand, 36879 - 36599
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||| ||| || |||||||||||||||||||||||| |||||||||| |||||        |||||||||||||||||||| | | ||  ||    
T  36879 aaacagagtagtagaggtagtggttgtacacttcgtacaattgttctttgtcaacactctt-taaagaacaagcatccaatgccttcaaatcctttcaaa 36781  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
    ||||||||||||||||| | ||  || ||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||  |||||  ||||||||    
T  36780 ttagtcgttgcttcacttttctagtcatctgcaatgcttagacgagattaaattcattgagcagcctttgaagctttaagtcttgcatctcttgatgaac 36681  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcact 286  Q
    |||||||||| |||||||| || |||||||||||||| | | ||||||||| |||||||||| |||||||||||||||||||    
T  36680 ttcagcttctagtgatcttctgcttctgatgagatgcttctaatgaacttgcttctgatgacgtcatcacttcaggagcact 36599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 286
Target Start/End: Original strand, 42126 - 42406
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||| ||| || |||||||||||||||||||||||| |||||||||| |||||        |||||||||||||||||||| | | ||  ||    
T  42126 aaacagagtagtagaggtagtggttgtacacttcgtacaattgttctttgtcaacactctt-taaagaacaagcatccaatgccttcaaatcctttcaaa 42224  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
    ||||||||||||||||| | ||  || ||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||  |||||  ||||||||    
T  42225 ttagtcgttgcttcacttttctagtcatctgcaatgcttagacgagattaaattcattgagcagcctttgaagctttaagtcttgcatctcttgatgaac 42324  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcact 286  Q
    |||||||||| |||||||| || |||||||||||||| | | ||||||||| |||||||||| |||||||||||||||||||    
T  42325 ttcagcttctagtgatcttctgcttctgatgagatgcttctaatgaacttgcttctgatgacgtcatcacttcaggagcact 42406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 12212 - 12497
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||| ||||| ||| ||    
T  12212 acacaatctgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaat-aagcatccaatgctttcaaattcttt 12310  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||| ||||||||||||| |   |||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||    ||| |||||    
T  12311 caaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaattcattgaacagcctttgaagctttaagtcttgtgtctcctgat 12410  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||  |||||||||||||| |    |||||||||||||| | ||||||||||| |||||||||| ||||||  ||||||||||||    
T  12411 gaactagagcttctggtgatcctcaacttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcagctcaggagcactt 12497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 122; Significance: 1e-62; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 9906 - 10123
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||  |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||| ||||||    
T  9906 acacaaacatagtagtggaggtagtggttttacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatctaatgccttcaaattcatt 10004  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    |||||||||||||| | |||||| |||||||||||||||||| ||||| ||| ||||||   ||||||||||||||||||||||| ||||||||||||||    
T  10005 tgaattagtcgttgttgcactcttctgatcttctgcaatgct-agacgtgattaaatccttagaacagcctttgaagctttaagtttctcatcttctgat 10103  T
Q  201 gaacttcagcttctggtgat 220  Q
    ||||||||||||||||||||    
T  10104 gaacttcagcttctggtgat 10123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 74 - 287
Target Start/End: Original strand, 30299 - 30507
Alignment:
Q  74 caagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagccttt 173  Q
    |||||||||||||| ||||| | | ||  || |||||||||||||||||| |   ||||||||||||||||||||||||  |||| | |||||| |||||    
T  30299 caagcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattgaatctattgaacatccttt 30398  T
Q  174 gaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatca 273  Q
    ||||||||||||||  ||||| |||||||| | || ||||||| ||||||  | ||||     ||||| | | |||||| || |||||||||| | ||||    
T  30399 gaagctttaagtcttgcatctcctgatgaattacaacttctggagatcttcagcttct-----gatgcttcttatgaacctgcttctgatgactttatca 30493  T
Q  274 cttcaggagcactt 287  Q
    ||||||||||||||    
T  30494 cttcaggagcactt 30507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 321
Target Start/End: Original strand, 30512 - 30559
Alignment:
Q  274 cttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||| ||||    
T  30512 cttcaggagcacttcgcttcagatgcttcaagttttctttttgttgat 30559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 119; Significance: 9e-61; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 16 - 287
Target Start/End: Complemental strand, 5040 - 4770
Alignment:
Q  16 tggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgttgc 115  Q
    ||||| || |||||||||||||| |||||||||||||||||||||||||         ||| |||||||||||||||| | | ||  || ||||||| ||    
T  5040 tggaggtagtggttgtacacttcatacaattgtactttgtcaacgctcta-taaagaacaaacatccaatgccttcaaatcctttcaaaatagtcgtcgc 4942  T
Q  116 ttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctg 215  Q
    ||||||||     |||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||||||||||||||||  ||||||||    
T  4941 ttcactctttcagtcttctacaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatcttctgatgaactagagcttctg 4842  T
Q  216 gtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||  | || ||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  4841 gtgatcttcagcttatgatgagatgcttctgatgaacttgcttctgatgacatcatcacttcaggagcactt 4770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 118; Significance: 3e-60; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 60019 - 60302
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||  |||||| ||||||||||||||||||||||||||| ||||||||||||||       ||||||||||||| |||||| | | ||    
T  60019 acacaaactgagtagaagagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaa-caagcatccaatggcttcaaatccttt 60117  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||| | |   ||||||||||| ||| |||||||| ||||||| |||||| |||||||||||||||||||  |||||||||||    
T  60118 caaaatagtcgttgcttcacttttccagtcttctgcaattcttggacgagattaaatccattgaacatcctttgaagctttaagtcttgcatcttctgat 60217  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||| ||||||||||||||  ||| |||| ||||||||| | | |||||||||  ||||||||| ||||||| ||||||||||||    
T  60218 gaactttagcttctggtgatc--ttgcttcttatgagatgcttctaatgaacttgcatctgatgacgtcatcacatcaggagcactt 60302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 7929 - 8150
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||       |||||||||||||  ||||| | | ||    
T  7929 acacaaacttcgtagtggagatagtggttgtacacttcgtacaattgtactatgtcaacgctcttcaaagaa-caagcatccaatgaattcaaatccttt 8027  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||||||||||| |     |||||| |||||||| |||||||| ||||||| |||||| ||||||||||||||||| |  ||||| |||||    
T  8028 caaaatagtcgttgcttcacttttacagtcttctacaatgcttggacgagattaaatccattgaacaacctttgaagctttaagttttgcatctcctgat 8127  T
Q  201 gaacttcagcttctggtgatctt 223  Q
    |||||| |||||||||| |||||    
T  8128 gaactttagcttctggttatctt 8150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 74 - 315
Target Start/End: Complemental strand, 151906 - 151685
Alignment:
Q  74 caagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagccttt 173  Q
    |||||||| ||||||||||| |||||||||||||| ||||| |||||  | ||| |||||| |||| || ||  | ||| ||||||  |||||| |||||    
T  151906 caagcatctaatgccttcaaattcatttgaattagccgttgtttcacgtttctggtcttctacaatact-aggtgtgattaaatcctttgaacaaccttt 151808  T
Q  174 gaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatca 273  Q
    |||||||||||||||||||||||||                 ||||||||  | |||| ||||| ||| | ||||||||||| |||||||||| ||||||    
T  151807 gaagctttaagtctctcatcttctg-----------------gtgatctt--gcttctcatgaggtgcttctgatgaacttgcttctgatgacgtcatca 151727  T
Q  274 cttcaggagcacttctcttcagatgcttcaattttccttttt 315  Q
    |||||||||||||  ||||||||||||||||| |||||||||    
T  151726 cttcaggagcactattcttcagatgcttcaatcttccttttt 151685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 190 - 287
Target Start/End: Original strand, 115712 - 115807
Alignment:
Q  190 catcttctgatgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||| ||||||||| ||||||||||||||||||  | |||||||||||||| | |||| |||||| || ||||||| ||||||||||||||||||||    
T  115712 catctcctgatgaacatcagcttctggtgatctt--gcttctgatgagatgcttctgataaacttgcttttgatgacgtcatcacttcaggagcactt 115807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 117; Significance: 1e-59; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 49335 - 49584
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| | | ||    
T  49335 acacaaactgagtagtggagatagttgttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatccaatgccttcaaatccttt 49433  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||| ||||||||||||| |  ||||||||||||||||||||||||| ||||||| ||||||  ||||||||||||||| ||  ||||| |||||    
T  49434 caaaatagtagttgcttcactcttcaaatcttctgcaatgcttagacgagattaaatccattgaacaaactttgaagctttaagacttgcatctcctgat 49533  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaa 251  Q
    ||||| || ||||||||||||||  | |||||||||||||| | |||||||    
T  49534 gaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaa 49584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 32488 - 32722
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||| ||||| ||||| | | ||    
T  32488 acacaaactgagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatcaaatgcattcaaatccttt 32586  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||||||| ||||||||| |   |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||  ||||| |||||    
T  32587 caaaatagtcgttacttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagtctttgaagctttaagtcttgcatctcctgat 32686  T
Q  201 gaacttcagcttctggtgatcttttgattctgatga 236  Q
    ||||| ||  || ||||||||||| | |||||||||    
T  32687 gaactacaagttgtggtgatctttagcttctgatga 32722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 449 - 389
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || |||| ||||||||||||||   |||||||||||||||||||    
T  449 aaacagagtagtggaggtagtggtcgtacacttcgtacagacgtactttgtcaacgctctt 389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 5798 - 5515
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||  | | ||    
T  5798 acacaaactgagtagtggagatagtagttgtacacttcgtacaattgtactttgtcaacgctctt-aaaagaacaagcatccaatgccttcatatccttt 5700  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||  |||||| |||||| |  ||||||| |||| ||| |||||||| ||||||| |||||| ||||||||||| |||||||  ||||| |||||    
T  5699 caaaatagatgttgctccactcttccaatcttctacaatacttggacgagattaaatccattgaacaacctttgaagctctaagtcttgcatctcctgat 5600  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||||| |||||||  ||| ||||  |||||||| | ||||||||||| |||||||||| ||||||||||||||||||||    
T  5599 gaacttcagcttcaggtgatc--ttgcttctagtgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 5515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 115; Significance: 2e-58; HSPs: 5)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 212361 - 212641
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||| | | ||| ||    
T  212361 aaacagagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagaa-caagcatccaatgctttcaaatccttttaaa 212459  T
Q  105 t-tagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaa 203  Q
      |||| ||||||||||||| ||  ||||||||||||||||||||||||  ||||||  ||| |||||||||||||||||||||   |||| ||||||||    
T  212460 aatagttgttgcttcactcttctagtcttctgcaatgcttagacgagattgaatccatagaatagcctttgaagctttaagtcttggatctcctgatgaa 212559  T
Q  204 cttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
     || |||||||| |||||  ||| |||||||||||||| | ||||||||||| |||||||||| |||| |||||||||||||||    
T  212560 gtttagcttctgatgatc--ttgcttctgatgagatgcttctgatgaacttgcttctgatgacgtcattacttcaggagcactt 212641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 74 - 287
Target Start/End: Complemental strand, 6234 - 6026
Alignment:
Q  74 caagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagccttt 173  Q
    |||||||||||||| ||||| | | ||  || |||||||||||||||||| |   ||||||||||||||||||||||||  |||| | |||||| |||||    
T  6234 caagcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattgaatctattgaacatccttt 6135  T
Q  174 gaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatca 273  Q
    ||||||||||||||  ||||| |||||||| | || ||||||| ||||||  | ||||     ||||| | | |||||| || |||||||||| | ||||    
T  6134 gaagctttaagtcttgcatctcctgatgaattacaacttctggagatcttcagcttct-----gatgcttcttatgaacctgcttctgatgactttatca 6040  T
Q  274 cttcaggagcactt 287  Q
    ||||||||||||||    
T  6039 cttcaggagcactt 6026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 246128 - 246086
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  246128 tgatgaacttgcttctgatgacgtcatcacttcaggagcactt 246086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 6021 - 5974
Alignment:
Q  274 cttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||| ||||    
T  6021 cttcaggagcacttcgcttcagatgcttcaagttttctttttgttgat 5974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 212644 - 212692
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||||||| | |||||  |||||||||| ||||    
T  212644 acttcaggagcacttctcttcagacgtttcaagcttcctttttgttgat 212692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 5 - 286
Target Start/End: Complemental strand, 21075 - 20795
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||         ||||||||||||||||||| | | ||  ||    
T  21075 aaacagagtagtggagatagtggttgtacacttcgtacaattgtacttggtcgacgctctttgaagaat-aagcatccaatgccttcaaatcctttcaaa 20977  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |   |||||||||||||| ||  |||||||||||||||||||||||| ||||| | |||||| |||||||||||||||||||  |||||  ||||||||    
T  20976 atgaccgttgcttcactcttctagtcttctgcaatgcttagacgagattaaatcaattgaacaacctttgaagctttaagtcttgcatctcttgatgaac 20877  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcact 286  Q
    |||| ||| ||||||||||  | |||| ||||||||| | ||||||||||| |||||||||| |||||||||||||||||||    
T  20876 ttcaacttttggtgatcttcagcttctaatgagatgcttctgatgaacttgtttctgatgacgtcatcacttcaggagcact 20795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 5 - 301
Target Start/End: Original strand, 22683 - 22979
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||| |||| |||||||||||||||||||| |||||         ||||||||||||||||||| | | ||  ||    
T  22683 aaacagagtagtggaggtagtggttgtacgcttcatacaattgtactttgtcaacactctttgaagaat-aagcatccaatgccttcaaatcctttcaaa 22781  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||||||||||||||| | |   |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||||| |||||||||    
T  22782 atagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaac 22881  T
Q  205 ttcagcttctggtgatcttttgattctgatg-agatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgctt 301  Q
    | |||| ||||||||||||  | |||||||| |  ||| | || || |||||||||||||||| ||||||||||||||| | ||||||||||| ||||    
T  22882 tacagcctctggtgatcttcagcttctgatgaacttgcttctggtggacttgattctgatgacgtcatcacttcaggagtagttctcttcagacgctt 22979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 223
Target Start/End: Original strand, 15122 - 15341
Alignment:
Q  3 acaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttg 102  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||       ||| |||||||||| ||||| | | ||      
T  15122 acaaactaagtagtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctattcaaagaa-caatcatccaatgctttcaaatcctttca 15220  T
Q  103 aattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatga 202  Q
    || |||||| ||||||||||| ||| |||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||  ||||| || |||     
T  15221 aaatagtcgatgcttcactcttctggtcttctgcaatgcttagacgagattaaatccattgatcagcctttgaagctttaagtcttgcatctccttatgc 15320  T
Q  203 acttcagcttctggtgatctt 223  Q
    |||||| ||||||||||||||    
T  15321 acttcatcttctggtgatctt 15341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 15376 - 15424
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||||||| |||| ||  |||||||||| ||||    
T  15376 acttcaggagcacttctcttcagacgctttaagcttcctttttgttgat 15424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 102; Significance: 1e-50; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 19580 - 19297
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||| | ||||||||||||||       |||||||||||||| || || | | ||    
T  19580 acacaaactgagtagtgaatatagtggttgtacacttcgtacaattgtattatgtcaacgctcttcaaagaa-caagcatccaatgcttttaaatccttt 19482  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||| ||||||||||||| ||  ||||||||||| ||||| ||| || ||||||| |||||| | |||||||||||||||||  ||||| || ||    
T  19481 caaaatagttgttgcttcactcttctagtcttctgcaattcttaggcgaaattaaatccattgaacaacttttgaagctttaagtcttgcatctcctcat 19382  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||| || ||||||||||||  ||| |||| ||||||||| | ||||||||||| |||||||||| | ||||||||||||||||||    
T  19381 gaactacaacttctggtgatc--ttgcttcttatgagatgcttctgatgaacttgcttctgatgacgttatcacttcaggagcactt 19297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 99309 - 99252
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgct 62  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||||| ||||| ||||    
T  99309 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcagcgct 99252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 29869 - 29910
Alignment:
Q  75 aagcatccaatgccttcaacttcatttgaattagtcgttgct 116  Q
    ||||||||||||||||| | ||||| ||||||||||||||||    
T  29869 aagcatccaatgccttccaattcatctgaattagtcgttgct 29910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 5 - 315
Target Start/End: Original strand, 9976 - 10269
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||| ||||||||||||||||| ||||||||||        ||||||||||||| ||||| | | ||  ||    
T  9976 aaacagagtagtggaggtagtggttgtacactttgtacaattgtactttgtgaacgctcttcaaagagt-aagcatccaatgctttcaaatcctttcaaa 10074  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||||||| ||||||||| ||  |||||||||| |||||||||||||  |||||| |||| |||||||||||||||||||||  ||||| |||||||||    
T  10075 atagtcgttacttcactcttctagtcttctgcaaagcttagacgagattgaatccattgaatagcctttgaagctttaagtcttgcatctcctgatgaac 10174  T
Q  205 ttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgcttcaa 304  Q
    |||| ||||| |||||||                ||| | ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  10175 ttcaacttcttgtgatct----------------tgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttctcttcagatgcttcaa 10258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 14651 - 14913
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||       |||||||||||||||||||| | | ||    
T  14651 acacaaactgagtagtggaggtagtggttgtacacttcgtaaaattgtactttgtcaacgctcttcaaagta-caagcatccaatgccttcaaatccttt 14749  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
      || |||| ||||||||||||| |   |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||| | || ||    
T  14750 caaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatttcctaat 14849  T
Q  201 gaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgac 266  Q
    ||  || ||||||||||||||  ||| |||||||||||||  | | ||||||| | ||||||||||    
T  14850 gatttttagcttctggtgatc--ttgcttctgatgagatgtttctaatgaactagcttctgatgac 14913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 100; Significance: 2e-49; HSPs: 3)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 10216 - 9997
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||| ||||||||||| || |||| ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| | | ||    
T  10216 acacaaacagagtagtggaggtagtggtcgtacacttcgtacaattgtactttgtcaacgctctt-taaaaaacaagcatccaatgccttcaaatccttt 10118  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagccttt-gaagctttaagtctctcatcttctga 199  Q
      || |||||||||||||||||| ||  |||||||||| ||||||| ||||| ||||||| |||||| ||||| ||||||||||||||  ||||| ||||    
T  10117 caaaatagtcgttgcttcactcttctagtcttctgcaaagcttagatgagattaaatccattgaacaaccttttgaagctttaagtcttgcatctcctga 10018  T
Q  200 tgaacttcagcttctggtgat 220  Q
    |||||||||||||||||||||    
T  10017 tgaacttcagcttctggtgat 9997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14880 - 14816
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||||||| ||||||||||| || |||| ||||||||||||||||||||||||||||||||||||    
T  14880 acacaaacagagtagtggaggtagtggtcgtacacttcgtacaattgtactttgtcaacgctctt 14816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 9957 - 9909
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||||| || ||||||  |||||||||| ||||    
T  9957 acttcaggagcacttctcttcatattcttcaagcttcctttttgttgat 9909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 1673 - 1884
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    |||||||||| || |||||||||||||| |||||||||||||||||||||||||||        ||||||||||||| ||||| | | ||  || |||||    
T  1673 agtagtggaggtagtggttgtacacttcctacaattgtactttgtcaacgctcttcaaagagt-aagcatccaatgctttcaaatcctttcaaaatagtc 1771  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagc 210  Q
    |||| |||||||| ||  |||||||||| |||||||||||||  |||||| |||||| |||||||||||||||||||  ||||| |||||||||||||||    
T  1772 gttgtttcactcttctagtcttctgcaaagcttagacgagattgaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaacttcagc 1871  T
Q  211 ttctggtgatctt 223  Q
    |||||||||||||    
T  1872 ttctggtgatctt 1884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 94; Significance: 7e-46; HSPs: 3)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 6010 - 6227
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    |||||||  ||||||| ||| || ||||||||||||| ||||||||||||||||||||||||||||       |||||||||||||||||||| | | ||    
T  6010 acacaaatagagtagtagaggtagtggttgtacactttgtacaattgtactttgtcaacgctcttcaaagaa-caagcatccaatgccttcaaatccttt 6108  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    ||||||||| ||||||||  ||| ||| |||||||||||||| || || ||| ||||||  ||||||| |||||||||||||| ||||||||||||||||    
T  6109 tgaattagttgttgcttcggtcttctggtcttctgcaatgct-aggcgtgattaaatcctttgaacagtctttgaagctttaaatctctcatcttctgat 6207  T
Q  201 gaacttcagcttctggtgat 220  Q
    |||||||| ||||| |||||    
T  6208 gaacttcaacttctagtgat 6227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 6236 - 6278
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| |||||||||||||| |||||    
T  6236 tgatgaacttgcttctgatgacgtcatcacttcaggaacactt 6278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 6280 - 6328
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||| ||||||||||||||||  |||||| ||| ||||    
T  6280 acttcaggagcacttttcttcagatgcttcaagcttccttcttgttgat 6328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 1693 - 1955
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| | | ||    
T  1693 acacaaactaagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctcttcaaagta-caagcatccaatgccttcaaatccttt 1791  T
Q  101 tgaattagtcgttgcttcactc-tcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctga 199  Q
      || |||| |||||||||||| ||| | |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||| | || |    
T  1792 caaaatagttgttgcttcactcctccag-tcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatttcctaa 1890  T
Q  200 tgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgac 266  Q
    |||  || ||||||| ||||||  ||| |||||||||||||  | | ||||||| | ||||||||||    
T  1891 tgatttttagcttctagtgatc--ttgcttctgatgagatgtttctaatgaactagcttctgatgac 1955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 92; Significance: 1e-44; HSPs: 7)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 159058 - 159356
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||  |||||| ||| || ||||| |||||||| ||||||||| |||||||||||||||||       |||||||  ||||||||||| ||||||    
T  159058 acacaaacaaagtagtagaggtagtggttttacacttcatacaattgtcctttgtcaacgctcttcaaagaa-caagcatataatgccttcaaattcatt 159156  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgat 200  Q
    |||||||| |||||||||||||| |||||||| ||||||| ||||||| ||| ||||||  |||||| ||||||||||| ||||||||||||||| ||||    
T  159157 tgaattagccgttgcttcactcttctgatcttttgcaatg-ttagacgtgattaaatcctttgaacatcctttgaagctctaagtctctcatcttttgat 159255  T
Q  201 gaacttcagcttctggtga---------tctt------ttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcac 285  Q
    |  |||||||||||| |||         ||||      ||| |||||||||| ||| | ||||||||||| |||||||||| ||||||||||||||||||    
T  159256 ggtcttcagcttctgatgaaaaactgcttcttgtgatgttgcttctgatgaggtgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac 159355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 77 - 236
Target Start/End: Original strand, 39503 - 39662
Alignment:
Q  77 gcatccaatgccttcaacttcatttgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaa 176  Q
    ||||| ||||||||||| | | ||  ||||||| ||||||||||||| ||  |||| || ||||| |||||||||| ||||||| |||||||||||||||    
T  39503 gcatctaatgccttcaaatcctttcaaattagttgttgcttcactcttctagtcttttgtaatgcctagacgagattaaatccattgaacagcctttgaa 39602  T
Q  177 gctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgattctgatga 236  Q
    ||||||| |||  ||||| ||||||||||  ||||||||||||||||  | |||||||||    
T  39603 gctttaaatcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatga 39662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 77 - 236
Target Start/End: Original strand, 137563 - 137722
Alignment:
Q  77 gcatccaatgccttcaacttcatttgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaa 176  Q
    ||||| ||||||||||| | | ||  ||||||| ||||||||||||| ||  |||| || ||||| |||||||||| ||||||| |||||||||||||||    
T  137563 gcatctaatgccttcaaatcctttcaaattagttgttgcttcactcttctagtcttttgtaatgcctagacgagattaaatccattgaacagcctttgaa 137662  T
Q  177 gctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgattctgatga 236  Q
    ||||||| |||  ||||| ||||||||||  ||||||||||||||||  | |||||||||    
T  137663 gctttaaatcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatga 137722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 37414 - 37463
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaac 59  Q
    ||||||||||| || |||||||||||||||||||||||||||||| ||||    
T  37414 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgccaac 37463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 135474 - 135523
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaac 59  Q
    ||||||||||| || |||||||||||||||||||||||||||||| ||||    
T  135474 gagtagtggaggtagtggttgtacacttcgtacaattgtactttgccaac 135523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 39702 - 39750
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  39702 acttcaggagcacttctcttcagatgcttcaagcttcctttttgttgat 39750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 137762 - 137810
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  137762 acttcaggagcacttctcttcagatgcttcaagcttcctttttgttgat 137810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 74 - 287
Target Start/End: Complemental strand, 822 - 611
Alignment:
Q  74 caagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagccttt 173  Q
    |||||||||||||||||||| | | ||  || |||||  ||||||||| | |   |||||||||||||||||||||||| |||| || ||||||| ||||    
T  822 caagcatccaatgccttcaaatcctttcaaaatagtcagtgcttcactattccagtcttctgcaatgcttagacgagattaaattcattgaacagtcttt 723  T
Q  174 gaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatca 273  Q
    |||| |||||||||  ||||| ||||||||||| ||||||||||||||  ||| |||||||||||||| | ||||||||||| |||| ||||| ||||||    
T  722 gaagttttaagtcttgcatctcctgatgaactttagcttctggtgatc--ttgcttctgatgagatgcttctgatgaacttgcttctaatgacgtcatca 625  T
Q  274 cttcaggagcactt 287  Q
    ||||||||||||||    
T  624 cttcaggagcactt 611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 28 - 287
Target Start/End: Original strand, 9825 - 10081
Alignment:
Q  28 ttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcgttgcttcactctcctg 127  Q
    |||||||||| ||||||||||||| ||||||||||||||       |||||||||||||| ||||| | | ||  || |||||||| |||||||||  ||    
T  9825 ttgtacactttgtacaattgtactatgtcaacgctcttcaaagca-caagcatccaatgctttcaagtcctttcaaaatagtcgttacttcactcttttg 9923  T
Q  128 atcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttga 227  Q
     ||||||  |||||||||||||||| ||||||| | ||||  | |||||||||||| |||  ||||| | ||||||||||||||||||||||||  |||     
T  9924 gtcttctataatgcttagacgagattaaatccattaaacaaaccttgaagctttaaatcttgcatctccagatgaacttcagcttctggtgatc--ttgc 10021  T
Q  228 ttctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    || ||||||||||| | |||| |||||| |||||||||| ||||||||||||||||||||    
T  10022 ttatgatgagatgcttctgattaacttgcttctgatgacgtcatcacttcaggagcactt 10081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 236
Target Start/End: Original strand, 7708 - 7940
Alignment:
Q  3 acaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttg 102  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||         || ||| ||||||||| || | | |       
T  7708 acaaactgagtagtggaggtagtggttgtacacttcgtacaattgtactttgtcaacgctctttgaagaataaa-catacaatgcctttaaatccttcca 7806  T
Q  103 aattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatga 202  Q
    || ||||||| |||||||||| |   |||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||||| |||||||    
T  7807 aaatagtcgtggcttcactcttccagtcttttgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatctcctgatga 7906  T
Q  203 acttcagcttctggtgatcttttgattctgatga 236  Q
    | |  ||||||||||||||||  | |||||||||    
T  7907 aatagagcttctggtgatcttcagcttctgatga 7940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 82; Significance: 1e-38; HSPs: 3)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 27533 - 27316
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||| |||||||||||||||||||        |||||||||||||||||| | | |  |  ||    
T  27533 aaacagagtagtggaggtagtggttgtacacttcgtacaatggtactttgtcaacgctctt-tgaagagcaagcatccaatgccttcgaatcctatcaaa 27435  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||  |||||||||||||     |||||||||||||||||||||||| |||| || |||||| |||||||||||||||||||  ||||| |||||||||    
T  27434 atagctgttgcttcactctttcagtcttctgcaatgcttagacgagattaaattcattgaacaacctttgaagctttaagtcttgcatctcctgatgaac 27335  T
Q  205 ttcagcttctggtgatctt 223  Q
    |||||| ||||||||||||    
T  27334 ttcagcatctggtgatctt 27316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 27264 - 27217
Alignment:
Q  274 cttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||| ||||||||||||||||||||||||  |||||||||| ||||    
T  27264 cttcagaagcacttctcttcagatgcttcaagcttcctttttgttgat 27217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 27310 - 27268
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||  ||||||||||||||||||||    
T  27310 tgatgaacttgcttctgatgatgtcatcacttcaggagcactt 27268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 44023 - 43822
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| |||||||||||||| |||||||||| ||||||||| ||| |||| ||||||||||||       || ||||||||||||||||| |   ||||||    
T  44023 aaacagagtagtggagatagtggttgtacaattcgtacaaatgtcctttttcaacgctcttcaaggaa-caggcatccaatgccttcaaatctttttgaa 43925  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
    |||| | |||||||||||| |||||||||||||||| |||| || ||| |||||   |||||||||||||||| |||||||||||||||||||||||| |    
T  43924 ttagcctttgcttcactcttctgatcttctgcaatg-ttaggcgtgattaaatcttttgaacagcctttgaagttttaagtctctcatcttctgatgatc 43826  T
Q  205 ttca 208  Q
    ||||    
T  43825 ttca 43822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 43787 - 43728
Alignment:
Q  228 ttctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||| || ||| | ||||||||||| |||||||||| ||||||||||| ||||||||    
T  43787 ttctgattaggtgcttctgatgaacttgcttctgatgacgtcatcacttcaagagcactt 43728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 129 - 321
Target Start/End: Complemental strand, 4974 - 4782
Alignment:
Q  129 tcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgat 228  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  |||||  ||||||| |  | ||| |||||||||   | |    
T  4974 tcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcttgatgaattaaaacttttggtgatctccagct 4875  T
Q  229 tctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||| || |||||| | ||||||||||| || ||||||| | ||||||||||||||||||||||||||| |||| ||  |||||||||| ||||    
T  4874 tctaataagatgcttttgatgaacttgcttttgatgacgttatcacttcaggagcacttctcttcagacgctttaagcttcctttttgttgat 4782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 13574 - 13741
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatt 100  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||       ||| |||||||||||||||| | | ||    
T  13574 acacaaactgagtagtggagatagtggttgtacactttgtacaattgtactatgtcaacgctcttc-aaagaacaaacatccaatgccttcaaatccttt 13672  T
Q  101 tgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagc 169  Q
      || |||| ||||||||||| | |  ||||||||||||||||||||||||| ||||||| ||||||||    
T  13673 caaaatagttgttgcttcactattccaatcttctgcaatgcttagacgagattaaatccattgaacagc 13741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 13856 - 13898
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| ||||||||||||||| |||||||||||||||    
T  13856 tgatgaacttgcttctgatgacatcattacttcaggagcactt 13898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 73; Significance: 2e-33; HSPs: 5)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 284
Target Start/End: Complemental strand, 36281 - 36013
Alignment:
Q  12 gtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtcg 111  Q
    |||||||||||| |||||||||||||||||||||||| | || ||||| |||| |        |||||||||||||||| ||   |||||||| |||| |    
T  36281 gtagtggagatagtggttgtacacttcgtacaattgtccattttcaactctctccaacgaaa-aagcatccaatgcctttaaaaccatttgaaatagttg 36183  T
Q  112 ttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagct 211  Q
    |||||||| ||| |   |||||||||||| | ||||| ||| ||||| | |||||| |||||||||||| || | |||||  ||||||||| ||||||||    
T  36182 ttgcttcattcttccagtcttctgcaatgat-agacgtgattaaatcaattgaacaacctttgaagcttcaattttctcagattctgatgatcttcagct 36084  T
Q  212 tctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagca 284  Q
    | ||||||| ||  | |||||||||| ||| | ||||||||||| |||||||||| ||||||||||| |||||    
T  36083 tatggtgatgtt--gcttctgatgaggtgcttctgatgaacttgcttctgatgacgtcatcacttcaagagca 36013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 287
Target Start/End: Complemental strand, 25596 - 25498
Alignment:
Q  190 catcttctgatgaacttcagcttctggtgatcttttgattctgatga-gatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||| |||||||||| ||||||||||||||   | | ||||||||| | ||| | ||||||||||| |||||||||| ||||||||||||||||||||    
T  25596 catctcctgatgaactgcagcttctggtgatacatagcttctgatgaagttgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 25498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 34694 - 34652
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  34694 tgatgaacttgcttctgatgacgtcatcacttcaggagcactt 34652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 25769 - 25712
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgct 62  Q
    |||| ||||||||||| || ||||||||||||||||||||  ||||| ||||||||||    
T  25769 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactatgtcaacgct 25712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 34908 - 34848
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || |||||||||||||| |||||  ||||| |||||||||||||    
T  34908 aaacagagtagtggaggtagtggttgtacacttcatacaaacgtactatgtcaacgctctt 34848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 209
Target Start/End: Original strand, 40644 - 40846
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| |||||||| || || |||||||||||||| ||||||||| |||| ||||||||||||       ||  ||||  |||||||||| ||| ||||||    
T  40644 aaacagagtagtgaaggtagtggttgtacacttcttacaattgttctttttcaacgctcttcaaagaaccac-catcatatgccttcaaattcttttgaa 40742  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
    |||| |||||||||||||| ||| ||||||||||||| |||  | ||| |||||   ||||||||||||||||||| || |||||||||||||||||| |    
T  40743 ttagccgttgcttcactcttctggtcttctgcaatgc-taggtgtgattaaatcttttgaacagcctttgaagcttcaattctctcatcttctgatgatc 40841  T
Q  205 ttcag 209  Q
    |||||    
T  40842 ttcag 40846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 103585 - 103791
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaat-tagt 109  Q
    |||||||||| || |||||| ||||||||||||||||||||||||||||||||||        ||||||||||||||||| ||  |||||| ||  |||     
T  103585 agtagtggaggtagtggttgcacacttcgtacaattgtactttgtcaacgctctt-tgaagaacaagcatccaatgcctt-aatatcatttcaaaatagc 103682  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
    |||||||||||||| |   |||||||||||| |||||| | || |||| || | |||| ||||| |||||||||||||  ||||| ||||||||||||||    
T  103683 cgttgcttcactcttccagtcttctgcaatgtttagacaaaattaaattcatttaacaacctttcaagctttaagtcttgcatctcctgatgaacttcag 103782  T
Q  210 cttctggtg 218  Q
    |||||||||    
T  103783 cttctggtg 103791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 66; Significance: 4e-29; HSPs: 4)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 19038 - 19255
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||||||||||||||| || ||||||||||||||||||| |||||||||  ||||||||||        |||||||| |||||||| || | | |   ||    
T  19038 aaactgagtagtggaggtagtggttgtacacttcgtacacttgtacttttccaacgctctt-tgaagaacaagcatcaaatgcctttaaatccttccaaa 19136  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     ||| |||||||||||||| |   ||||||||||||||| |||||||| ||||||| |||||||||||| |||||||||||||   |||  ||||||||     
T  19137 atagccgttgcttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaacagcctttcaagctttaagtcttgtatcacctgatgaaa 19236  T
Q  205 ttcagcttctggtgatctt 223  Q
    |  ||||||||||||||||    
T  19237 tagagcttctggtgatctt 19255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 9567 - 9624
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgct 62  Q
    |||| |||||||||||||| ||||||||||||||||||| | ||||| ||||||||||    
T  9567 aaacagagtagtggagatagtggttgtacacttcgtacagtcgtactatgtcaacgct 9624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 9787 - 9831
Alignment:
Q  243 tatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||    
T  9787 tatgatgaacttgcttctgatgacatcatcacttcatgagcactt 9831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 22235 - 22177
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctc 63  Q
    |||| ||||| |||||||| ||||||||||||||||||||  ||| | |||||||||||    
T  22235 aaacagagtactggagatagtggttgtacacttcgtacaaacgtattatgtcaacgctc 22177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 5935 - 5813
Alignment:
Q  115 cttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagccttt-gaagctttaagtctctcatcttctgatgaacttcagcttc 213  Q
    |||||||||  || |||||||||||||||| ||||||| ||||||| |||||| ||||| ||||||||||||||  ||||| || |||||||||||||||    
T  5935 cttcactcttatggtcttctgcaatgcttaaacgagatgaaatccattgaacatccttttgaagctttaagtcttgcatctcctaatgaacttcagcttc 5836  T
Q  214 tggtgatcttttgattctgatga 236  Q
    ||||||||||| | |||||||||    
T  5835 tggtgatctttagcttctgatga 5813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 5776 - 5726
Alignment:
Q  271 tcacttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||| |||||||| ||||||||||||||||  |||||||||| ||||    
T  5776 tcacttcatgagcacttttcttcagatgcttcaaacttcctttttgttgat 5726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 15796 - 16011
Alignment:
Q  1 acacaaactgagtagtggagataatggttgtacacttcgtacaa-ttgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcat 99  Q
    |||||||||||||||| |||||  |||||||||||||||||||| ||||||| ||||||||||||||       |||||||||||||||||||| | | |    
T  15796 acacaaactgagtagtagagatggtggttgtacacttcgtacaatttgtactatgtcaacgctcttc-aaagaacaagcatccaatgccttcaagtcctt 15894  T
Q  100 ttgaattagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaac-agcctttgaagctttaagtctctcatcttctg 198  Q
    |  || || | | ||||||||||  ||| |||| |||||| ||| ||||||||  |||||| ||||| | | |||||||||||||||||  ||||| |||    
T  15895 tcaaaataattggtgcttcactcctctggtcttttgcaattcttggacgagattgaatccattgaacaatcttttgaagctttaagtcttgcatctcctg 15994  T
Q  199 atgaacttcagcttctg 215  Q
    |||||||| ||||||||    
T  15995 atgaactttagcttctg 16011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 16070 - 16118
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    ||||||||||||| ||||||||||||||||||  |||||||||| ||||    
T  16070 acttcaggagcacatctcttcagatgcttcaagcttcctttttgttgat 16118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 16007 - 16066
Alignment:
Q  228 ttctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||||||||||  | ||||||||||| |||||||||  ||||||||||| ||||||||    
T  16007 ttctgatgagatggttctgatgaacttgcttctgatgatgtcatcacttcatgagcactt 16066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 287
Target Start/End: Complemental strand, 215601 - 215321
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||||||||||  |||||||||||||||||||        |||||||||||||||||||| | | ||  ||    
T  215601 aaacagagtagtggaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaa 215503  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     ||| |||||||||||| | ||  |||||||||||  ||||||||| |  |||||| | |||||| ||||||| ||||||  |  ||||| ||||| |||    
T  215502 atagccgttgcttcacttttctagtcttctgcaatctttagacgagtttgaatccattaaacagcttttgaagttttaag--ttgcatctcctgataaac 215405  T
Q  205 ttcagcttctggtgatcttttgattctgat-gagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    | |||||||||||||| ||  | |||||||  |  ||| | ||||||||||| |||||||||| ||  ||||||| ||||||||    
T  215404 tgcagcttctggtgattttcggcttctgataaacttgcttctgatgaacttgcttctgatgacgtctccacttcatgagcactt 215321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 90159 - 89947
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| ||  |||||||||||||||||| ||||| |||||||||||||||        |||||||||||||||||||| | | ||  ||    
T  90159 aaacagagtagtggaggtaggggttgtacacttcgtacacttgtattttgtcaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaa 90061  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     ||| ||||| |||||||| |   ||||||| ||| |||||||||||| |||| || ||| || ||||||||||||||||  |  ||||| |||||||||    
T  90060 atagccgttggttcactcttccagtcttctgtaatacttagacgagattaaatacattgatcaacctttgaagctttaag--ttgcatctcctgatgaac 89963  T
Q  205 ttcagcttctggtgat 220  Q
    | ||||||||||||||    
T  89962 tgcagcttctggtgat 89947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 5634 - 5849
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||||||||||||||| || ||||||||||||||||||||||||| |||  ||||| ||| |        ||||||||||||||||||| ||||||||||    
T  5634 aaactgagtagtggaggtagtggttgtacacttcgtacaattgtattttc-caacgttctccaaagaat-aagcatccaatgccttcaaattcatttgaa 5731  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaac 204  Q
     |||||||||||||| ||| ||  ||||||| ||||  ||| |  ||| ||| |   ||||||||||||||||||| || ||| ||| |||||||||| |    
T  5732 atagtcgttgcttcattcttctagtcttctggaatg-ataggcatgattaaaacatttgaacagcctttgaagcttcaattctttcagcttctgatgatc 5830  T
Q  205 ttcagcttctggtgatctt 223  Q
    |||| || ||| |||||||    
T  5831 ttcaactcctgatgatctt 5849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 195 - 286
Target Start/End: Complemental strand, 13448 - 13357
Alignment:
Q  195 tctgatgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcact 286  Q
    |||||||||||||||||||||||| ||||  | |||||||||||||| | |||||||| || || | |||||||||||||||||||||||||    
T  13448 tctgatgaacttcagcttctggtgttcttcagcttctgatgagatgcttctgatgaacatgcttttaatgacatcatcacttcaggagcact 13357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 1619 - 1409
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    ||||||||||||| |||||||||||||||||||||||| ||||  ||||| |||||        || | |||||||||||||| | | |||||| |||||    
T  1619 agtagtggagatagtggttgtacacttcgtacaattgtccttttccaacgttcttcaaagaat-aaacgtccaatgccttcaaatccttttgaaatagtc 1521  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagc 210  Q
    ||||||||||||   |  ||||||||||||  | | || ||| |||||   |||||| |||||||||||| || ||||||| |||||||||| |||||||    
T  1520 gttgcttcactcctatagtcttctgcaatg-atgggcgtgattaaatcatttgaacaacctttgaagcttcaattctctcagcttctgatgatcttcagc 1422  T
Q  211 ttctggtgatctt 223  Q
    | ||| |||||||    
T  1421 tcctgatgatctt 1409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 2090 - 2038
Alignment:
Q  14 agtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttc 66  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2090 agtggagatagtggttgtacacttcgtacaattgtactttgtcaacgctcttc 2038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 143195 - 143325
Alignment:
Q  106 tagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaact 205  Q
    |||||||||||||||||| |   ||||||||||||||| |||||||| ||||||| |||| ||||||| ||||||| |||||  |||||  ||||||| |    
T  143195 tagtcgttgcttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaatagcctttcaagctttgagtcttgcatctcgtgatgaaat 143294  T
Q  206 tcagcttctggtgatcttttgattctgatga 236  Q
      ||||||| ||||||||  | |||||||||    
T  143295 agagcttctagtgatcttcagcttctgatga 143325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1747 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 1324 - 1385
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttc 66  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||    
T  1324 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttc 1385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1745 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 87 - 26
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttc 66  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||    
T  87 aaacagagtagtggagatagtggttgtacacttcgtacaattgtagtttttcaacgctcttc 26  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 9338 - 9252
Alignment:
Q  178 ctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgac 266  Q
    ||||||||||  ||||| ||||||||||||||||||||||||||  ||| |||||||||||||| | ||||||||||  ||||||||||    
T  9338 ctttaagtcttgcatctcctgatgaacttcagcttctggtgatc--ttgcttctgatgagatgcttctgatgaactttcttctgatgac 9252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 74824 - 74885
Alignment:
Q  243 tatgatgaacttgattctgatgacatcatcacttcaggagcacttctcttcagatgcttcaa 304  Q
    ||||||||||||| |||||||||| ||| |||||||||||||||| ||||||||||||||||    
T  74824 tatgatgaacttgcttctgatgacgtcaacacttcaggagcacttttcttcagatgcttcaa 74885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 265
Target Start/End: Original strand, 74730 - 74831
Alignment:
Q  162 tgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctg 261  Q
    |||||| ||||||||||||||| |||| || ||||||||||  |||||||||||||||  | ||| |||||||||| ||| ||||||||||||| || ||    
T  74730 tgaacaacctttgaagctttaattctcacagcttctgatgatgttcagcttctggtga--tgttgtttctgatgaggtgcttatgatgaacttgcttatg 74827  T
Q  262 atga 265  Q
    ||||    
T  74828 atga 74831  T

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Target: scaffold0025; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 74594 - 74641
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaa 58  Q
    |||||| ||| || |||||||||||||| |||||||||||||||||||    
T  74594 agtagtagaggtagtggttgtacacttcatacaattgtactttgtcaa 74641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 287
Target Start/End: Complemental strand, 78464 - 78205
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagtc 110  Q
    ||||||| || || ||||||||||||||||||||  |||||||||||||||||||         ||||||||||||||||||| | | ||  || |||||    
T  78464 agtagtgtaggtagtggttgtacacttcgtacaaacgtactttgtcaacgctctttaaagaat-aagcatccaatgccttcaaatcctttcaaaatagtc 78366  T
Q  111 gttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcagc 210  Q
    ||||||||||| | |   |||||||||||  ||||||||| |  ||||| || || ||| |||||||||||||| ||  |||||  ||||||||| ||||    
T  78365 gttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgataaatagcttttgaagctttaag-ctg-catctcatgatgaactacagc 78268  T
Q  211 ttctggtgatcttttgattctgatgagatgcctatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||  |  |||||||||||              ||||| |||||||||||||||||||||||||||||||    
T  78267 ttctggtgattctcagattctgatga--------------acttgcttctgatgacatcatcacttcaggagcactt 78205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 44; Significance: 5e-16; HSPs: 3)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 185
Target Start/End: Complemental strand, 759 - 580
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaa 104  Q
    |||| ||||||||||| || ||||||||||||| ||||||  |||||||||||||||||||        |||||||||||||||||||| | | ||  ||    
T  759 aaacagagtagtggaggtagtggttgtacacttagtacaaacgtactttgtcaacgctctt-tgaagaacaagcatccaatgccttcaaatcctttcaaa 661  T
Q  105 ttagtcgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagt 185  Q
     |||||||||||||||| | |   |||||||||||  ||||||||| |  ||||||   |||||| | |||||||||||||    
T  660 atagtcgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccatcaaacagcttctgaagctttaagt 580  T

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Target: scaffold1359; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 1859 - 1799
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||| | |||||||||||||    
T  1859 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtaatatgtcaacgctctt 1799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 553 - 511
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||    
T  553 tgatgaacttgcttctgatgacgtcaccacttcaggagcactt 511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 220
Target Start/End: Complemental strand, 6839 - 6632
Alignment:
Q  10 gagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctcttcnnnnnnncaagcatccaatgccttcaacttcatttgaattagt 109  Q
    ||||| ||||| || ||||||||||||||||||||  |||||||||||| ||||||        |||||||||||||||||||| |   ||  || ||||    
T  6839 gagtactggaggtagtggttgtacacttcgtacaaacgtactttgtcaatgctctt-tgaagaacaagcatccaatgccttcaaatcttttcaaaatagt 6741  T
Q  110 cgttgcttcactctcctgatcttctgcaatgcttagacgagatcaaatccaatgaacagcctttgaagctttaagtctctcatcttctgatgaacttcag 209  Q
    || ||||||||| | |   ||||||||||| ||||||| || |  |||||  | |||||| ||||||||||||||  |  ||||| |||||||||| |||    
T  6740 cggtgcttcacttttccagtcttctgcaatccttagacaagtttgaatccgttaaacagcttttgaagctttaag--ttgcatctcctgatgaactacag 6643  T
Q  210 cttctggtgat 220  Q
    |||||||||||    
T  6642 cttctggtgat 6632  T

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Target: scaffold0015 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 60810 - 60870
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  60810 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 60870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 61033 - 61075
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||| |||||| |||||||||| ||||||||||||||||||||    
T  61033 tgataaacttgcttctgatgacgtcatcacttcaggagcactt 61075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 9168 - 9222
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    ||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  9168 agtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacgctctt 9222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 7388 - 7448
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||  || |||||||||||||||||||| |||||| |||||||||||||    
T  7388 aaacagagtagtggaagtagtggttgtacacttcgtacaaatgtactatgtcaacgctctt 7448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 2834 - 2774
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||||| ||||||| |||||    
T  2834 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacactctt 2774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 17869 - 17809
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| |||||||||||||| |||||  ||||| |||||||||||||    
T  17869 aaacagagtagtggagatagtggttgtacacttcatacaaacgtactatgtcaacgctctt 17809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 17656 - 17614
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| |||||||||||||| |||||    
T  17656 tgatgaacttgcttctgatgacgtcatcacttcaggatcactt 17614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 25503 - 25443
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| ||||||||||||||||||||  ||||| ||||||| |||||    
T  25503 aaacagagtagtggagatagtggttgtacacttcgtacaaacgtactatgtcaacactctt 25443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 2593 - 2550
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcacttc 288  Q
    ||||||||||| |||||||||| |||||||||||||||||||||    
T  2593 tgatgaacttgcttctgatgacgtcatcacttcaggagcacttc 2550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 2795 - 2738
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgct 62  Q
    |||| ||||||||||| || |||||||||||||| |||||  ||||| ||||||||||    
T  2795 aaacagagtagtggagttagtggttgtacacttcatacaaacgtactatgtcaacgct 2738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 8513 - 8555
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  8513 tgatgaacttgcttctgatgacgtcatcacttcaggagcactt 8555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 250
Target Start/End: Complemental strand, 60799 - 60729
Alignment:
Q  180 ttaagtctctcatcttctgatgaacttcagcttctggtgatcttttgattctgatgagatgcctatgatga 250  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||  | |||| ||||||||| | ||||||    
T  60799 ttaagtcttgcatcttctgatgaacttcagcttgtggtgatcttcagcttctaatgagatgcttctgatga 60729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 60705 - 60657
Alignment:
Q  273 acttcaggagcacttctcttcagatgcttcaattttcctttttgatgat 321  Q
    |||||||||||||||||||||||| |||||||  |||||||||| ||||    
T  60705 acttcaggagcacttctcttcagacgcttcaagcttcctttttgttgat 60657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 5700 - 5646
Alignment:
Q  11 agtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||||||||| || |||||||||||||| || || ||||||||||||||||||||    
T  5700 agtagtggaggtagtggttgtacacttcatataaatgtactttgtcaacgctctt 5646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 3999 - 3939
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||| ||||||| || |||| ||||||||||||||  ||||||||||||||||||||    
T  3999 aaacagagaagtggaggtagtggtcgtacacttcgtacagatgtactttgtcaacgctctt 3939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 15726 - 15666
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| |||||||||||||| |||| ||||||||||||||   |||||||||||| ||||||    
T  15726 aaacagagtagtggagatagtggtcgtacacttcgtacagacgtactttgtcaatgctctt 15666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 941 - 985
Alignment:
Q  243 tatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||||| |||||||||| |||||||||||| |||||||    
T  941 tatgatgaacttgcttctgatgacgtcatcacttcagaagcactt 985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 65310 - 65270
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcac 285  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  65310 tgatgaacttgcttctgatgacatcatcacttcaagagcac 65270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 165050 - 164990
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || |||| ||||||||||||||   |||||||||||||||||||    
T  165050 aaacagagtagtggaggtagtggtcgtacacttcgtacagacgtactttgtcaacgctctt 164990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 7260 - 7221
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaa 44  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  7260 aaacagagtagtggagatagtggttgtacacttcgtacaa 7221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 3564 - 3606
Alignment:
Q  245 tgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    |||||| |||| |||||||||| ||||||||||||||||||||    
T  3564 tgatgaccttgcttctgatgacgtcatcacttcaggagcactt 3606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 33 - 87
Alignment:
Q  164 aacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgat 220  Q
    |||||| |||||||||||||||  |  ||||||||||||||| ||||||||||||||    
T  33 aacagcttttgaagctttaagttac--atcttctgatgaactgcagcttctggtgat 87  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 8096 - 8150
Alignment:
Q  164 aacagcctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgat 220  Q
    |||||| |||||||||||||||  |  ||||||||||||||| ||||||||||||||    
T  8096 aacagcttttgaagctttaagttac--atcttctgatgaactgcagcttctggtgat 8150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 1783 - 1743
Alignment:
Q  25 tggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    ||||||||||||||||| ||  |||||||||||||||||||    
T  1783 tggttgtacacttcgtaaaaacgtactttgtcaacgctctt 1743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 925 - 865
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||  || ||||||||||||||||||||  ||| | |||||||||||||    
T  925 aaacagagtagtggaagtagtggttgtacacttcgtacaaacgtattatgtcaacgctctt 865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 7292 - 7352
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||| ||||||| || |||| ||||||||||||||  |||||||||||||| |||||    
T  7292 aaacagagaagtggaggtagtggtcgtacacttcgtacatatgtactttgtcaacactctt 7352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 38189 - 38129
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||| || |||| |||||||||||||    |||||||||||||||||||    
T  38189 aaacagagtagtggaggtagtggtcgtacacttcgtacggacgtactttgtcaacgctctt 38129  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 87479 - 87435
Alignment:
Q  243 tatgatgaacttgattctgatgacatcatcacttcaggagcactt 287  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||    
T  87479 tatgatgaactagcttctgatgacgtcatcacttcagaagcactt 87435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 87704 - 87644
Alignment:
Q  5 aaactgagtagtggagataatggttgtacacttcgtacaattgtactttgtcaacgctctt 65  Q
    |||| ||||||||||  || |||||||||||||||||||   ||||| |||||||||||||    
T  87704 aaacagagtagtggaagtagtggttgtacacttcgtacagacgtactatgtcaacgctctt 87644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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