View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0172_low_13 (Length: 307)

Name: NF0172_low_13
Description: NF0172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0172_low_13
NF0172_low_13
[»] scaffold0553 (1 HSPs)
scaffold0553 (1-217)||(10163-10380)
[»] scaffold0544 (1 HSPs)
scaffold0544 (1-217)||(1493-1710)
[»] chr3 (27 HSPs)
chr3 (1-217)||(23370473-23370690)
chr3 (34-217)||(9534199-9534382)
chr3 (34-211)||(14762758-14762936)
chr3 (36-211)||(20247791-20247967)
chr3 (36-213)||(24192830-24193009)
chr3 (36-211)||(38310802-38310978)
chr3 (25-143)||(24933820-24933937)
chr3 (36-215)||(55499104-55499285)
chr3 (33-214)||(16801467-16801648)
chr3 (33-115)||(41455097-41455178)
chr3 (4-88)||(17131732-17131816)
chr3 (4-88)||(13302213-13302295)
chr3 (34-95)||(18929239-18929300)
chr3 (24-88)||(13323778-13323842)
chr3 (4-88)||(14865846-14865930)
chr3 (34-98)||(17240513-17240577)
chr3 (4-88)||(13312869-13312951)
chr3 (4-88)||(12033416-12033499)
chr3 (18-143)||(10389428-10389553)
chr3 (18-143)||(10414517-10414642)
chr3 (18-143)||(10421187-10421312)
chr3 (28-88)||(51301589-51301649)
chr3 (32-68)||(23392818-23392854)
chr3 (36-90)||(16801027-16801081)
chr3 (28-86)||(19235063-19235121)
chr3 (32-69)||(2247648-2247685)
chr3 (32-68)||(52212430-52212466)
[»] chr5 (19 HSPs)
chr5 (33-217)||(38144536-38144720)
chr5 (34-217)||(28370055-28370238)
chr5 (34-217)||(19512257-19512441)
chr5 (33-211)||(22751018-22751197)
chr5 (33-143)||(23528577-23528686)
chr5 (34-98)||(18407944-18408008)
chr5 (4-88)||(19236900-19236984)
chr5 (32-89)||(22438746-22438803)
chr5 (34-98)||(23111200-23111264)
chr5 (4-86)||(22461158-22461240)
chr5 (4-86)||(22467782-22467864)
chr5 (28-88)||(20781744-20781804)
chr5 (28-88)||(20772969-20773029)
chr5 (28-87)||(34830086-34830144)
chr5 (32-62)||(17021912-17021942)
chr5 (32-68)||(21663141-21663177)
chr5 (32-68)||(22356902-22356938)
chr5 (4-88)||(28909261-28909344)
chr5 (4-88)||(28945656-28945739)
[»] scaffold0026 (2 HSPs)
scaffold0026 (28-217)||(111557-111746)
scaffold0026 (33-211)||(11850-12029)
[»] chr8 (14 HSPs)
chr8 (18-217)||(44477494-44477693)
chr8 (18-217)||(44492652-44492851)
chr8 (36-217)||(8727735-8727917)
chr8 (33-211)||(23866491-23866670)
chr8 (35-143)||(17054537-17054644)
chr8 (125-217)||(27940946-27941038)
chr8 (4-88)||(24320641-24320725)
chr8 (34-98)||(23482053-23482117)
chr8 (34-90)||(18614271-18614327)
chr8 (24-89)||(25111976-25112041)
chr8 (34-90)||(39364919-39364975)
chr8 (34-88)||(29643386-29643440)
chr8 (32-89)||(14056562-14056619)
chr8 (34-90)||(21931696-21931752)
[»] chr2 (18 HSPs)
chr2 (34-217)||(6483589-6483772)
chr2 (34-217)||(6487056-6487239)
chr2 (34-214)||(19661454-19661634)
chr2 (33-214)||(26583702-26583882)
chr2 (34-217)||(23101463-23101647)
chr2 (36-217)||(23089057-23089239)
chr2 (36-217)||(23878879-23879060)
chr2 (28-143)||(5706018-5706133)
chr2 (4-88)||(25180900-25180984)
chr2 (1-88)||(26885183-26885269)
chr2 (4-88)||(10577-10661)
chr2 (34-98)||(23265133-23265197)
chr2 (34-98)||(23280201-23280265)
chr2 (1-88)||(27207687-27207774)
chr2 (34-95)||(21908353-21908414)
chr2 (1-86)||(23168267-23168351)
chr2 (1-86)||(23579524-23579608)
chr2 (34-90)||(24661576-24661632)
[»] chr7 (32 HSPs)
chr7 (33-214)||(14422858-14423040)
chr7 (34-217)||(16009448-16009631)
chr7 (38-211)||(10895795-10895969)
chr7 (34-211)||(15168052-15168230)
chr7 (33-211)||(18873237-18873416)
chr7 (33-211)||(12709843-12710022)
chr7 (33-211)||(13122914-13123093)
chr7 (33-213)||(13743584-13743764)
chr7 (36-214)||(16677167-16677348)
chr7 (36-214)||(17651403-17651584)
chr7 (33-210)||(12590643-12590818)
chr7 (33-143)||(13007378-13007487)
chr7 (4-88)||(2971254-2971338)
chr7 (1-89)||(14567203-14567291)
chr7 (34-89)||(11382871-11382926)
chr7 (34-89)||(11389348-11389403)
chr7 (1-88)||(14319597-14319684)
chr7 (32-89)||(20311050-20311107)
chr7 (32-89)||(21230958-21231015)
chr7 (1-88)||(20906429-20906516)
chr7 (6-88)||(29181082-29181164)
chr7 (6-85)||(16091078-16091157)
chr7 (34-97)||(13679485-13679548)
chr7 (1-88)||(14230781-14230868)
chr7 (18-86)||(31155396-31155464)
chr7 (34-88)||(11311059-11311113)
chr7 (34-90)||(46625961-46626017)
chr7 (33-69)||(831633-831669)
chr7 (33-69)||(1196813-1196849)
chr7 (28-88)||(2465361-2465421)
chr7 (28-88)||(3857360-3857419)
chr7 (33-69)||(34958578-34958614)
[»] chr6 (35 HSPs)
chr6 (28-217)||(10986175-10986365)
chr6 (34-217)||(23839069-23839253)
chr6 (34-214)||(4477731-4477912)
chr6 (33-211)||(29614146-29614325)
chr6 (34-211)||(23057815-23057993)
chr6 (33-214)||(18800311-18800493)
chr6 (33-167)||(930095-930229)
chr6 (28-116)||(34646655-34646743)
chr6 (33-143)||(12168309-12168418)
chr6 (33-143)||(19287218-19287327)
chr6 (33-143)||(19785869-19785978)
chr6 (33-143)||(19878402-19878511)
chr6 (36-217)||(21565214-21565396)
chr6 (28-116)||(34639981-34640069)
chr6 (33-143)||(19884178-19884287)
chr6 (32-139)||(25469703-25469808)
chr6 (32-89)||(24512842-24512899)
chr6 (34-86)||(9187498-9187550)
chr6 (34-90)||(25348486-25348542)
chr6 (18-98)||(31252413-31252493)
chr6 (36-90)||(25598643-25598697)
chr6 (7-61)||(28288484-28288537)
chr6 (5-86)||(20007919-20007999)
chr6 (7-122)||(11288643-11288758)
chr6 (18-86)||(15458492-15458560)
chr6 (18-86)||(15465087-15465155)
chr6 (34-90)||(25397172-25397228)
chr6 (34-90)||(19471335-19471391)
chr6 (36-90)||(2286769-2286823)
chr6 (28-86)||(9099066-9099124)
chr6 (34-68)||(18659450-18659484)
chr6 (6-88)||(21364456-21364537)
chr6 (6-88)||(23968438-23968519)
chr6 (34-68)||(24441673-24441707)
chr6 (32-68)||(29847278-29847314)
[»] chr1 (17 HSPs)
chr1 (34-217)||(20437024-20437208)
chr1 (33-143)||(41111981-41112090)
chr1 (4-88)||(20851103-20851187)
chr1 (4-88)||(20857730-20857814)
chr1 (4-88)||(21706276-21706360)
chr1 (4-88)||(21710818-21710902)
chr1 (34-98)||(32651563-32651627)
chr1 (34-98)||(18712790-18712854)
chr1 (34-89)||(19663517-19663572)
chr1 (34-90)||(20805320-20805376)
chr1 (34-89)||(11158093-11158148)
chr1 (36-90)||(10811785-10811839)
chr1 (34-64)||(24476350-24476380)
chr1 (34-64)||(25091418-25091448)
chr1 (35-68)||(18271338-18271371)
chr1 (35-68)||(18275992-18276025)
chr1 (25-86)||(20044943-20045004)
[»] scaffold0029 (3 HSPs)
scaffold0029 (33-211)||(111758-111938)
scaffold0029 (28-88)||(91197-91257)
scaffold0029 (28-88)||(96923-96983)
[»] scaffold1773 (1 HSPs)
scaffold1773 (33-211)||(1055-1233)
[»] scaffold0006 (1 HSPs)
scaffold0006 (33-211)||(50056-50234)
[»] scaffold0025 (1 HSPs)
scaffold0025 (36-213)||(14398-14577)
[»] scaffold0247 (1 HSPs)
scaffold0247 (33-217)||(11212-11397)
[»] scaffold0924 (1 HSPs)
scaffold0924 (33-211)||(750-930)
[»] scaffold0058 (1 HSPs)
scaffold0058 (33-213)||(167-346)
[»] scaffold0117 (2 HSPs)
scaffold0117 (33-210)||(8574-8751)
scaffold0117 (33-210)||(1897-2074)
[»] chr4 (16 HSPs)
chr4 (33-210)||(8045832-8046009)
chr4 (33-211)||(11847984-11848169)
chr4 (28-143)||(53483650-53483765)
chr4 (32-89)||(15408139-15408196)
chr4 (6-88)||(16146803-16146885)
chr4 (34-90)||(8834895-8834951)
chr4 (34-90)||(13888641-13888697)
chr4 (36-88)||(14486661-14486713)
chr4 (34-90)||(15245215-15245271)
chr4 (28-88)||(27906266-27906326)
chr4 (39-90)||(22724691-22724742)
chr4 (34-90)||(15308120-15308176)
chr4 (32-90)||(14912081-14912139)
chr4 (34-64)||(15069781-15069811)
chr4 (34-64)||(15076381-15076411)
chr4 (33-69)||(15747556-15747592)
[»] scaffold0154 (1 HSPs)
scaffold0154 (33-214)||(30730-30913)
[»] scaffold0090 (1 HSPs)
scaffold0090 (33-213)||(18043-18225)
[»] scaffold0476 (1 HSPs)
scaffold0476 (36-217)||(3295-3478)
[»] scaffold0077 (1 HSPs)
scaffold0077 (36-217)||(3624-3806)
[»] scaffold0796 (2 HSPs)
scaffold0796 (33-143)||(1732-1841)
scaffold0796 (33-143)||(5755-5864)
[»] scaffold0456 (2 HSPs)
scaffold0456 (33-116)||(904-987)
scaffold0456 (33-116)||(8049-8132)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-88)||(10239-10326)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-88)||(492996-493082)
[»] scaffold0129 (1 HSPs)
scaffold0129 (32-143)||(45273-45384)
[»] scaffold1318 (1 HSPs)
scaffold1318 (1-88)||(1880-1967)
[»] scaffold0222 (1 HSPs)
scaffold0222 (34-98)||(16811-16875)
[»] scaffold0023 (2 HSPs)
scaffold0023 (4-88)||(135438-135522)
scaffold0023 (32-68)||(163352-163388)
[»] scaffold0004 (2 HSPs)
scaffold0004 (34-98)||(116887-116951)
scaffold0004 (35-68)||(60441-60474)
[»] scaffold0310 (1 HSPs)
scaffold0310 (32-89)||(17643-17700)
[»] scaffold0107 (1 HSPs)
scaffold0107 (32-89)||(40530-40587)
[»] scaffold0019 (1 HSPs)
scaffold0019 (32-89)||(135473-135530)
[»] scaffold0461 (1 HSPs)
scaffold0461 (34-98)||(8-72)
[»] scaffold0348 (1 HSPs)
scaffold0348 (20-88)||(9336-9404)
[»] scaffold0146 (1 HSPs)
scaffold0146 (34-98)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (34-98)||(101928-101992)
[»] scaffold0053 (1 HSPs)
scaffold0053 (6-88)||(79463-79545)
[»] scaffold0235 (1 HSPs)
scaffold0235 (35-87)||(22594-22646)
[»] scaffold0720 (1 HSPs)
scaffold0720 (1-88)||(3370-3457)
[»] scaffold0124 (2 HSPs)
scaffold0124 (34-89)||(34276-34331)
scaffold0124 (32-90)||(35437-35495)
[»] scaffold0609 (1 HSPs)
scaffold0609 (18-98)||(5842-5922)
[»] scaffold0138 (1 HSPs)
scaffold0138 (34-90)||(12296-12352)
[»] scaffold0131 (1 HSPs)
scaffold0131 (4-88)||(997-1080)
[»] scaffold0317 (1 HSPs)
scaffold0317 (34-97)||(1378-1441)
[»] scaffold0139 (1 HSPs)
scaffold0139 (34-89)||(14997-15052)
[»] scaffold0072 (1 HSPs)
scaffold0072 (6-88)||(49943-50025)
[»] scaffold0261 (1 HSPs)
scaffold0261 (28-88)||(23564-23624)
[»] scaffold0249 (1 HSPs)
scaffold0249 (18-86)||(13879-13947)
[»] scaffold0815 (1 HSPs)
scaffold0815 (34-85)||(1453-1504)
[»] scaffold0096 (1 HSPs)
scaffold0096 (35-90)||(39508-39563)
[»] scaffold0384 (1 HSPs)
scaffold0384 (25-86)||(16056-16117)
[»] scaffold0335 (1 HSPs)
scaffold0335 (34-90)||(2628-2684)
[»] scaffold0453 (1 HSPs)
scaffold0453 (29-88)||(10546-10605)
[»] scaffold2054 (1 HSPs)
scaffold2054 (33-122)||(680-770)
[»] scaffold0481 (1 HSPs)
scaffold0481 (35-80)||(676-721)
[»] scaffold0962 (1 HSPs)
scaffold0962 (32-68)||(614-650)
[»] scaffold0600 (1 HSPs)
scaffold0600 (34-90)||(732-788)
[»] scaffold0422 (1 HSPs)
scaffold0422 (32-84)||(3962-4014)
[»] scaffold0181 (1 HSPs)
scaffold0181 (32-68)||(25519-25555)
[»] scaffold0180 (1 HSPs)
scaffold0180 (34-83)||(11630-11681)
[»] scaffold0034 (1 HSPs)
scaffold0034 (36-88)||(73285-73337)
[»] scaffold0031 (2 HSPs)
scaffold0031 (34-90)||(121902-121958)
scaffold0031 (34-90)||(132778-132834)
[»] scaffold0028 (1 HSPs)
scaffold0028 (34-86)||(69749-69801)


Alignment Details
Target: scaffold0553 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 10163 - 10380
Alignment:
Q  1 acggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10163 acggatttgctgtgctttttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgca 10262  T
Q  101 ta-attttggaaaataaattgagggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatg 199  Q
    ||  |||||||| |||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  10263 tagtttttggaagataaattgtgggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatg 10362  T
Q  200 aaaacttaatctatactg 217  Q
    ||||||||||||||||||    
T  10363 aaaacttaatctatactg 10380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 1493 - 1710
Alignment:
Q  1 acggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1493 acggatttgctgtgctttttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgca 1592  T
Q  101 ta-attttggaaaataaattgagggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatg 199  Q
    ||  |||||||| |||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  1593 tagtttttggaagataaattgtgggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatg 1692  T
Q  200 aaaacttaatctatactg 217  Q
    ||||||||||||||||||    
T  1693 aaaacttaatctatactg 1710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 178; Significance: 5e-96; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 23370473 - 23370690
Alignment:
Q  1 acggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23370473 acggatttgctgtgctttttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgca 23370572  T
Q  101 ta-attttggaaaataaattgagggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatg 199  Q
    ||  |||||||| |||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  23370573 tagtttttggaagataaattgtgggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatg 23370672  T
Q  200 aaaacttaatctatactg 217  Q
    ||||||||||||||||||    
T  23370673 aaaacttaatctatactg 23370690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 34 - 217
Target Start/End: Complemental strand, 9534382 - 9534199
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggttt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 9534283  T
Q  134 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9534282 gatgatgattctgagtggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactg 9534199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 34 - 211
Target Start/End: Original strand, 14762758 - 14762936
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggttt 133  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 14762857  T
Q  134 gatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 211  Q
    |||||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  14762858 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 14762936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 36 - 211
Target Start/End: Original strand, 20247791 - 20247967
Alignment:
Q  36 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttga 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 20247890  T
Q  136 tgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 211  Q
    |||||||| || ||||  ||||||| |||||||||||||| | ||||||| ||||||| ||||||||||||||||||    
T  20247891 tgatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatct 20247967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 36 - 213
Target Start/End: Complemental strand, 24193009 - 24192830
Alignment:
Q  36 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcata-attttggaaaataaattgagggttagggtttg 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 24192910  T
Q  135 atgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctat 213  Q
    ||||||||| || ||||  ||||||| |||||||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  24192909 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctat 24192830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 36 - 211
Target Start/End: Original strand, 38310802 - 38310978
Alignment:
Q  36 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttga 135  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttga 38310901  T
Q  136 tgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 211  Q
    |||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  38310902 tgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 38310978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 24933820 - 24933937
Alignment:
Q  25 ctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgaggg 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||       
T  24933820 ctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaa 24933918  T
Q  125 ttagggtttgatgatgatt 143  Q
    |||||||||||||||||||    
T  24933919 ttagggtttgatgatgatt 24933937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 36 - 215
Target Start/End: Original strand, 55499104 - 55499285
Alignment:
Q  36 aggtaagggtgagactatctctcaataatc-ataatctataatttctg-aaaattgacctaattgcataattttggaaaataaattgagggttagggttt 133  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| | ||||||||||||| ||| |||  |||   |  |||||||||||||||||||    
T  55499104 aggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttgaggataaaattgagggttagggttt 55499203  T
Q  134 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatac 215  Q
    |||||||||| ||||||| ||||||| |||||||||||||| | ||||||||| |||||  |||||||| ||||||||||||    
T  55499204 gatgatgattctgaggggaatgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatac 55499285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 33 - 214
Target Start/End: Original strand, 16801467 - 16801648
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaat-aaattgagggttagggt 131  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||| ||  ||| ||| || ||||||| ||||||||     
T  16801467 ctaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttgaagataaaattgaaggttaggg- 16801564  T
Q  132 ttgatgatgattatgaggggtatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 214  Q
    |||||||||||| ||||| | |||| ||| |||||||||||| | |  |||||||| ||||||||||||||  ||||| |||||    
T  16801565 ttgatgatgattttgaggagaatggtgtaatgatcatgttaaatatgctgtaatgtgatgtttagaatgaattcttaacctata 16801648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 33 - 115
Target Start/End: Original strand, 41455097 - 41455178
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaata 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  41455097 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaata 41455178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 17131816 - 17131732
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  17131816 gatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 13302213 - 13302295
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||| ||||| |||  ||||||||||||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13302213 gatttgctgtgttttttttct--acaattctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 18929300 - 18929239
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 95  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 13323778 - 13323842
Alignment:
Q  24 tctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13323778 tctacaattctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 14865930 - 14865846
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||| ||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  14865930 gatttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 14865846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 17240513 - 17240577
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 98  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 13312869 - 13312951
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||| ||||| |||  ||||||||||||||||||||||| ||||| |||||||||||||| | |||||| ||||||||    
T  13312869 gatttgctgtgttttttttct--acaattctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 12033416 - 12033499
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||||| ||||||||| |||| | ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  12033416 gatttgatgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 10389428 - 10389553
Alignment:
Q  18 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaa 117  Q
    ||||||| | ||||||||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | ||||||| ||| ||||  | |||||     
T  10389428 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataat 10389527  T
Q  118 ttgagggttagggtttgatgatgatt 143  Q
     |||   |||||||||||||||||||    
T  10389528 atgaaaattagggtttgatgatgatt 10389553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 10414517 - 10414642
Alignment:
Q  18 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaa 117  Q
    ||||||| | ||||||||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | ||||||| ||| ||||  | |||||     
T  10414517 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataat 10414616  T
Q  118 ttgagggttagggtttgatgatgatt 143  Q
     |||   |||||||||||||||||||    
T  10414617 atgaaaattagggtttgatgatgatt 10414642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 10421187 - 10421312
Alignment:
Q  18 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaa 117  Q
    ||||||| | ||||||||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | ||||||| ||| ||||  | |||||     
T  10421187 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataat 10421286  T
Q  118 ttgagggttagggtttgatgatgatt 143  Q
     |||   |||||||||||||||||||    
T  10421287 atgaaaattagggtttgatgatgatt 10421312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 51301649 - 51301589
Alignment:
Q  28 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||||||||||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  51301649 caattctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 23392818 - 23392854
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcata 68  Q
    ||||||||||||||||||||| |||||||||||||||    
T  23392818 tctaaggtaagggtgagactaactctcaataatcata 23392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 16801081 - 16801027
Alignment:
Q  36 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    ||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  16801081 aggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 16801027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 19235063 - 19235121
Alignment:
Q  28 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 86  Q
    ||||||||||||||||||| || ||||| |||||| | ||||| ||| |||||||||||    
T  19235063 caattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaa 19235121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 2247648 - 2247685
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcataa 69  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  2247648 tctaaggtaagggtgagactaactctcaataattataa 2247685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 52212430 - 52212466
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcata 68  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  52212430 tctaaggtaagggtgaggctaactctcaataatcata 52212466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 177; Significance: 2e-95; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 33 - 217
Target Start/End: Original strand, 38144536 - 38144720
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144536 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 38144635  T
Q  133 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144636 tgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 38144720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 34 - 217
Target Start/End: Original strand, 28370055 - 28370238
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggttt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 28370154  T
Q  134 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    |||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  28370155 gatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 28370238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 34 - 217
Target Start/End: Complemental strand, 19512441 - 19512257
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtt 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 19512342  T
Q  133 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19512341 tgatgatgattttgaggggaatgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactg 19512257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 22751197 - 22751018
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  22751197 ctaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 22751098  T
Q  133 tgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 211  Q
    ||||||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  22751097 tgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 22751018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 23528686 - 23528577
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||    
T  23528686 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 23528588  T
Q  133 tgatgatgatt 143  Q
    |||||||||||    
T  23528587 tgatgatgatt 23528577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 18407944 - 18408008
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 98  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 19236984 - 19236900
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  19236984 gatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 22438746 - 22438803
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 89  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22438746 tctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 23111200 - 23111264
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 98  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 22461240 - 22461158
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 86  Q
    |||||||||||| |||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22461240 gatttgctgtgccttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 22467864 - 22467782
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 86  Q
    |||||||||||| |||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22467864 gatttgctgtgccttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 20781804 - 20781744
Alignment:
Q  28 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||| || ||||| |||||||| ||||| ||| |||||||||||||    
T  20781804 caattctaaggtaagggtgggattatctttcaataattataatatatgatttctgaaaatt 20781744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 20773029 - 20772969
Alignment:
Q  28 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||| || ||||| |||||| | ||||| ||| |||||||||||||    
T  20773029 caattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaatt 20772969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 34830144 - 34830086
Alignment:
Q  28 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaat 87  Q
    ||||||||||||||||||| || ||||| ||||||||  |||| ||||||||||||||||    
T  34830144 caattctaaggtaagggtgggattatctttcaataat-ttaatgtataatttctgaaaat 34830086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 62
Target Start/End: Original strand, 17021912 - 17021942
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaata 62  Q
    |||||||||||||||||||||||||||||||    
T  17021912 tctaaggtaagggtgagactatctctcaata 17021942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 21663141 - 21663177
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcata 68  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  21663141 tctaaggtaagggtgaggctaactctcaataatcata 21663177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 22356902 - 22356938
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcata 68  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  22356902 tctaaggtaagggtgaggctaactctcaataatcata 22356938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 28909261 - 28909344
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||||||||||||||| |||  | ||||||||||||||||||| ||  |||| |||||| | ||| | ||| |||||||||||||    
T  28909261 gatttgctgtgctttt-gtcgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctgaaaatt 28909344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 28945656 - 28945739
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||||||||||||||| |||  | ||||||||||||||||||| ||  |||| |||||| | ||| | ||| |||||||||||||    
T  28945656 gatttgctgtgctttt-gtcgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctgaaaatt 28945739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 174; Significance: 1e-93; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 111746 - 111557
Alignment:
Q  28 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggtta 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  111746 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggtta 111647  T
Q  128 gggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  111646 gggtttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactg 111557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 11850 - 12029
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  11850 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagagttagggtt 11949  T
Q  133 tgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 211  Q
    ||||||||||| || ||||  ||||||| |||||||||||||||| ||||||| |||| || ||||||||||||||||||    
T  11950 tgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatct 12029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 172; Significance: 2e-92; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 18 - 217
Target Start/End: Complemental strand, 44477693 - 44477494
Alignment:
Q  18 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaa 117  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44477693 tttgtcttcacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaa 44477594  T
Q  118 ttgagggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  44477593 ttgagggttagggtttgatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 44477494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 18 - 217
Target Start/End: Complemental strand, 44492851 - 44492652
Alignment:
Q  18 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaa 117  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44492851 tttgtcttcacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaa 44492752  T
Q  118 ttgagggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  44492751 ttgagggttagggtttgatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 44492652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 36 - 217
Target Start/End: Original strand, 8727735 - 8727917
Alignment:
Q  36 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtttg 134  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 8727834  T
Q  135 atgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    | ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  8727835 acgatgattctgaggggtatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactg 8727917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 23866670 - 23866491
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  23866670 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 23866572  T
Q  133 tgatgatgattatg-aggggtatgggtattgatcatgttaattcta-ttgtaatgtaatgtttagaatgaaaacttaatct 211  Q
    |||||||||||||| || |  ||||||| ||||||||||||||||| ||||||| ||||||| |||||  |||||||||||    
T  23866571 tgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct 23866491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 17054644 - 17054537
Alignment:
Q  35 aaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttg 134  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||||    
T  17054644 aaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtttg 17054546  T
Q  135 atgatgatt 143  Q
    |||||||||    
T  17054545 atgatgatt 17054537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 27940946 - 27941038
Alignment:
Q  125 ttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  27940946 ttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaatttaatctatactg 27941038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 24320641 - 24320725
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  24320641 gatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 23482053 - 23482117
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 98  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 18614327 - 18614271
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattga 18614271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 25112041 - 25111976
Alignment:
Q  24 tctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 89  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  25112041 tctacaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 39364975 - 39364919
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    ||||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 88
Target Start/End: Original strand, 29643386 - 29643440
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 14056562 - 14056619
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 89  Q
    ||||||||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  14056562 tctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 21931752 - 21931696
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    ||||||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  21931752 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 164; Significance: 1e-87; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 34 - 217
Target Start/End: Complemental strand, 6483772 - 6483589
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggttt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6483673  T
Q  134 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    |||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  6483672 gatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 6483589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 34 - 217
Target Start/End: Complemental strand, 6487239 - 6487056
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggttt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6487140  T
Q  134 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    |||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  6487139 gatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 6487056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 19661454 - 19661634
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggttt 133  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  19661454 taaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 19661553  T
Q  134 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 214  Q
    |||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19661554 gatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctata 19661634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 33 - 214
Target Start/End: Complemental strand, 26583882 - 26583702
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |    
T  26583882 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggct 26583784  T
Q  133 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 214  Q
    ||||||||||| ||||||| | ||||| |||||||||||| | | |||||| || ||||| ||||||||  | |||||||||    
T  26583783 tgatgatgattctgaggggaaagggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctata 26583702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 34 - 217
Target Start/End: Original strand, 23101463 - 23101647
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    |||||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||  |||  |||   |  ||||||||||||||||||    
T  23101463 taaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttgaggataaaattgagggttagggtt 23101562  T
Q  133 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    ||||||||||| ||||||| ||||||| |||||||||||||| | ||||||||| | |||  |||||||| ||||||||||||||    
T  23101563 tgatgatgattctgaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactg 23101647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 36 - 217
Target Start/End: Original strand, 23089057 - 23089239
Alignment:
Q  36 aggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttg 134  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||| |||  |||   |  ||||||||||||||||||||    
T  23089057 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttg 23089156  T
Q  135 atgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    ||||||||| | ||||| ||||||| |||||||||||||| | ||||||||| | |||  |||||||| ||||||||||||||    
T  23089157 atgatgattctaaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactg 23089239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 36 - 217
Target Start/End: Complemental strand, 23879060 - 23878879
Alignment:
Q  36 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttga 135  Q
    |||||||||||||||||||||||| |||| || || |||||||||  ||||||||||||||||| |||  |||   | ||||||||||||||||| |||     
T  23879060 aggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttgaggattaaattgagggttaggg-ttgt 23878962  T
Q  136 tgatgattatgaggggtat-gggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    |||||||| ||||||| || ||||| |||||||||||||| | ||||||||| ||||| ||||||||| ||||||||||||||    
T  23878961 tgatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatctatactg 23878879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 5706018 - 5706133
Alignment:
Q  28 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaat-tgagggtt 126  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||| ||| |||| |||||  ||| |||   ||    
T  5706018 caattctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaatt 5706116  T
Q  127 agggtttgatgatgatt 143  Q
    |||||||||||||||||    
T  5706117 agggtttgatgatgatt 5706133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 25180900 - 25180984
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  25180900 gatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 26885269 - 26885183
Alignment:
Q  1 acggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||| || ||||| ||||||||| |||| |||||||||||||||||    
T  26885269 acggatttgatgtgctttttgtctctgcaattctaaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaatt 26885183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 10661 - 10577
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||||| |  |||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  10661 gatttgctgtgctttttgtctttgaaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 23265197 - 23265133
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 98  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 23280265 - 23280201
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 98  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 27207687 - 27207774
Alignment:
Q  1 acggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| || ||||| ||||| ||  |||| |||||||||||||||||    
T  27207687 acggatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaaatt 27207774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 21908414 - 21908353
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 95  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 23168267 - 23168351
Alignment:
Q  1 acggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 86  Q
    |||| |||||||||||||| || ||| ||||||||||||||||||| || ||||| ||| | |||||||| |||||||||||||||    
T  23168267 acggttttgctgtgctttt-gtttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaa 23168351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 23579524 - 23579608
Alignment:
Q  1 acggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 86  Q
    |||| |||||||||||||| || ||| ||||||||||||||||||| || ||||| ||| | |||||||| |||||||||||||||    
T  23579524 acggttttgctgtgctttt-gtttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaa 23579608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 24661632 - 24661576
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  24661632 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 155; Significance: 3e-82; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 33 - 214
Target Start/End: Complemental strand, 14423040 - 14422858
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggt 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||    
T  14423040 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggt 14422941  T
Q  132 ttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 214  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14422940 ttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctata 14422858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 34 - 217
Target Start/End: Complemental strand, 16009631 - 16009448
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggttt 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| |||||| |||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggttt 16009532  T
Q  134 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    |||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16009531 gatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactg 16009448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 38 - 211
Target Start/End: Original strand, 10895795 - 10895969
Alignment:
Q  38 gtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtttgat 136  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||| |||||||| |||||||||||||||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  137 gatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 211  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  10895895 gatgattctgaggggaatgggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 10895969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 34 - 211
Target Start/End: Complemental strand, 15168230 - 15168052
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggttt 133  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 15168131  T
Q  134 gatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 211  Q
    |||||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  15168130 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 15168052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 18873416 - 18873237
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  18873416 ctaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 18873317  T
Q  133 tgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 211  Q
    ||||||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  18873316 tgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 18873237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 12709843 - 12710022
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  12709843 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 12709941  T
Q  133 tgatgatgattatg-aggggtatgggtattgatcatgttaattcta-ttgtaatgtaatgtttagaatgaaaacttaatct 211  Q
    |||||||||||||| || |  ||||||| ||||||||||||||||| ||||||| ||||||| |||||  |||||||||||    
T  12709942 tgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct 12710022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 13122914 - 13123093
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  13122914 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 13123012  T
Q  133 tgatgatgattatg-aggggtatgggtattgatcatgttaattcta-ttgtaatgtaatgtttagaatgaaaacttaatct 211  Q
    |||||||||||||| || |  ||||||| ||||||||||||||||| ||||||| ||||||| |||||  |||||||||||    
T  13123013 tgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct 13123093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 13743764 - 13743584
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  13743764 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 13743666  T
Q  133 tgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctat 213  Q
    |||||||||||||| || |  ||||||| |||||||||||||| | ||||| | |  |||| ||| |||| |||||||||||    
T  13743665 tgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctat 13743584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 36 - 214
Target Start/End: Complemental strand, 16677348 - 16677167
Alignment:
Q  36 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcata-attttggaaaat-aaattgagggttagggttt 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||| || ||||| |||||||||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 16677249  T
Q  134 gatgatgattatgaggggtatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 214  Q
    |||||||||| ||||| | |||| ||| |||||||||||| | | |||||| || ||||| ||||||||  | |||||||||    
T  16677248 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctata 16677167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 36 - 214
Target Start/End: Complemental strand, 17651584 - 17651403
Alignment:
Q  36 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcata-attttggaaaat-aaattgagggttagggttt 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||| || ||||| |||||||||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 17651485  T
Q  134 gatgatgattatgaggggtatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 214  Q
    |||||||||| ||||| | |||| ||| |||||||||||| | | |||||| || ||||| ||||||||  | |||||||||    
T  17651484 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctata 17651403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 33 - 210
Target Start/End: Original strand, 12590643 - 12590818
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||    
T  12590643 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaagttagggtt 12590741  T
Q  133 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 210  Q
    ||||||||||| |||  || ||| |||  ||| |||||| || | ||| ||| ||||||| ||||||||| |||||||    
T  12590742 tgatgatgattctga-tggaatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatc 12590818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 13007487 - 13007378
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||    
T  13007487 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 13007389  T
Q  133 tgatgatgatt 143  Q
    |||||||||||    
T  13007388 tgatgatgatt 13007378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 2971338 - 2971254
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  2971338 gatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 14567291 - 14567203
Alignment:
Q  1 acggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |  ||||| || ||||| |||  |||||||||||||    
T  14567291 acggatttgctgtgctttttgtctctacaattctaaggtaagggtgaggctaaccttcaatgattataatatatggtttctgaaaattg 14567203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 11382871 - 11382926
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 89  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 11389348 - 11389403
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 89  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 14319597 - 14319684
Alignment:
Q  1 acggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| || ||||| ||||| ||  |||| |||||||||||||||||    
T  14319597 acggatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaaatt 14319684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 20311050 - 20311107
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 89  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  20311050 tctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 21230958 - 21231015
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 89  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  21230958 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20906429 - 20906516
Alignment:
Q  1 acggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||||||||||| ||| ||||||  | ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20906429 acggatttgctgagctatttgtccttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 29181082 - 29181164
Alignment:
Q  6 tttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||| ||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  29181082 tttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 29181164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 16091157 - 16091078
Alignment:
Q  6 tttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 85  Q
    ||||||||||| ||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| | ||||||||||||    
T  16091157 tttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaa 16091078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 13679548 - 13679485
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 97  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 13679485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 14230868 - 14230781
Alignment:
Q  1 acggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||||||||  ||||||||||||| | ||||||||||||||||||| || ||||| ||||| |   |||| |||||||||||||||||    
T  14230868 acggatttgtcgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatgaatttaatgtataatttctgaaaatt 14230781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 31155464 - 31155396
Alignment:
Q  18 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 86  Q
    ||||||| | ||||||||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  31155464 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 31155396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 11311113 - 11311059
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||||||||||||||| ||| | || ||||||| ||||||    
T  11311113 taaggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 46626017 - 46625961
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    |||| |||||||||||||| |||||||| || ||||| ||||||||| |||||||||    
T  46626017 taagataagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 831633 - 831669
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataa 69  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  831633 ctaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 1196813 - 1196849
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataa 69  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  1196813 ctaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 2465421 - 2465361
Alignment:
Q  28 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||| ||  |||  |||||||| ||||| ||| |||||||||||||    
T  2465421 caattctaaggtaagggtgggatcatccttcaataatgataatatatgatttctgaaaatt 2465361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 3857360 - 3857419
Alignment:
Q  28 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||| ||  |||| |||||||| ||||| ||| |||||||||||||    
T  3857360 caattctaaggtaagggtgggatcatct-tcaataatgataatatatgatttctgaaaatt 3857419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 34958614 - 34958578
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataa 69  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  34958614 ctaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 7e-80; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 28 - 217
Target Start/End: Original strand, 10986175 - 10986365
Alignment:
Q  28 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggtt 126  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||| |||| ||||||||||||||    
T  10986175 caattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattgagggtt 10986274  T
Q  127 agggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  10986275 agggtttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactg 10986365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 34 - 217
Target Start/End: Complemental strand, 23839253 - 23839069
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataat-tttggaaaataaattgagggttagggtt 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtt 23839154  T
Q  133 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    ||||||||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  23839153 tgatgatgattctaaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactg 23839069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 34 - 214
Target Start/End: Complemental strand, 4477912 - 4477731
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtt 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||| |||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 4477813  T
Q  133 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 214  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  4477812 tgatgatgattctgaggggaatgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctata 4477731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 29614146 - 29614325
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttgg-aaaataaattgagggttagggt 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  29614146 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattgagggttagggt 29614245  T
Q  132 ttgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 211  Q
    ||||||||||||||| ||||  ||||||| |||||||||||||||| ||||| || |||||||||||||||||||||||||    
T  29614246 ttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgtattg-aatgtttagaatgaaaacttaatct 29614325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 34 - 211
Target Start/End: Complemental strand, 23057993 - 23057815
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggttt 133  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  23057993 taaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 23057894  T
Q  134 gatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 211  Q
    |||||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  23057893 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 23057815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 33 - 214
Target Start/End: Complemental strand, 18800493 - 18800311
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaata-aattgagggttagggt 131  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||    
T  18800493 ctaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggttagggt 18800394  T
Q  132 ttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 214  Q
    |||||||||||| ||  ||| ||| ||| |||||||||||||||| ||||||||| ||||| | ||||||| |||||||||||    
T  18800393 ttgatgatgattctggagggaatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatctata 18800311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 33 - 167
Target Start/End: Original strand, 930095 - 930229
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  930095 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgagggttagggtt 930194  T
Q  133 tgatgatgattatgaggggtatgggtattgatcat 167  Q
    |||||||| || ||| ||| ||||||| |||||||    
T  930195 tgatgatgtttctgaagggaatgggtaatgatcat 930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 34646655 - 34646743
Alignment:
Q  28 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataa 116  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34646655 caattctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataa 34646743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 12168418 - 12168309
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||    
T  12168418 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 12168320  T
Q  133 tgatgatgatt 143  Q
    |||||||||||    
T  12168319 tgatgatgatt 12168309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 19287327 - 19287218
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||    
T  19287327 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 19287229  T
Q  133 tgatgatgatt 143  Q
    |||||||||||    
T  19287228 tgatgatgatt 19287218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 19785869 - 19785978
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||| |||  |||||||||    
T  19785869 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaaagttagggtt 19785967  T
Q  133 tgatgatgatt 143  Q
    |||||||||||    
T  19785968 tgatgatgatt 19785978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 19878511 - 19878402
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||    
T  19878511 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 19878413  T
Q  133 tgatgatgatt 143  Q
    |||||||||||    
T  19878412 tgatgatgatt 19878402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 36 - 217
Target Start/End: Original strand, 21565214 - 21565396
Alignment:
Q  36 aggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttg 134  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||| |||  |||   |  ||||||||||||||||||||    
T  21565214 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttg 21565313  T
Q  135 atgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    ||||||||| | ||||| ||||||| |||||||||||||| | ||||||||| | |||  |||||||| ||||||||||||||    
T  21565314 atgatgattctaaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactg 21565396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 34639981 - 34640069
Alignment:
Q  28 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataa 116  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  34639981 caattctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataa 34640069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 19884287 - 19884178
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||    
T  19884287 ctaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 19884189  T
Q  133 tgatgatgatt 143  Q
    |||||||||||    
T  19884188 tgatgatgatt 19884178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 139
Target Start/End: Original strand, 25469703 - 25469808
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggt 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||  |||||||||||||  |||   |||||||    
T  25469703 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggt 25469800  T
Q  132 ttgatgat 139  Q
    ||||||||    
T  25469801 ttgatgat 25469808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 24512842 - 24512899
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 89  Q
    |||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  24512842 tctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 9187550 - 9187498
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 86  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 25348542 - 25348486
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    ||||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 31252493 - 31252413
Alignment:
Q  18 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 98  Q
    ||||||| | |||||||||||||||||||||| ||||| | ||| || ||||| ||||||||||||||||| | |||||||    
T  31252493 tttgtctttgcaattctaaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattg 31252413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 25598697 - 25598643
Alignment:
Q  36 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    ||||||||||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  25598697 aggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 28288484 - 28288537
Alignment:
Q  7 ttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaat 61  Q
    |||||||| ||||||||| | ||||||||||||||||||||||||||||||||||    
T  28288484 ttgctgtg-tttttgtctttgcaattctaaggtaagggtgagactatctctcaat 28288537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 20007919 - 20007999
Alignment:
Q  5 atttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 86  Q
    ||||||||||||||| |||| | ||||||||||||||||||| ||  |||| |||||| ||||||| |||||||| ||||||    
T  20007919 atttgctgtgctttt-gtctttgcaattctaaggtaagggtgggatcatctttcaatagtcataatatataatttatgaaaa 20007999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 122
Target Start/End: Original strand, 11288643 - 11288758
Alignment:
Q  7 ttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcataatt 105  Q
    |||||||| |||||||||   ||||||||||||||||||| || ||||| ||||| ||| |||| ||||||||||| |||||| ||||||  | ||| ||    
T  11288643 ttgctgtg-tttttgtcttggcaattctaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagtt 11288741  T
Q  106 ttggaaaataaattgag 122  Q
     | ||||||||||||||    
T  11288742 cttgaaaataaattgag 11288758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 15458560 - 15458492
Alignment:
Q  18 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 86  Q
    ||||||| | ||||||||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  15458560 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15458492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 15465155 - 15465087
Alignment:
Q  18 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 86  Q
    ||||||| | ||||||||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  15465155 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15465087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 25397228 - 25397172
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  25397228 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 19471335 - 19471391
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    ||||||||||||||| ||| ||||| || |||||||| ||||||||||| |||||||    
T  19471335 taaggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 2286769 - 2286823
Alignment:
Q  36 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    ||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  2286769 aggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 2286823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 9099066 - 9099124
Alignment:
Q  28 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 86  Q
    ||||||||||||||||||| || ||||| |||||| | ||||| ||| |||||||||||    
T  9099066 caattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaa 9099124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 18659484 - 18659450
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcata 68  Q
    ||||||||||||||||||| |||||||||||||||    
T  18659484 taaggtaagggtgagactaactctcaataatcata 18659450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 21364456 - 21364537
Alignment:
Q  6 tttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||||||||||||| |||| | |||||| |||||||||||| || ||||  ||| |||| ||||| ||| |||||||||||||    
T  21364456 tttgctgtgctttt-gtctttgcaattcaaaggtaagggtgggattatccttcagtaatgataatatatgatttctgaaaatt 21364537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 23968438 - 23968519
Alignment:
Q  6 tttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||||||||||||| |||| | |||||| |||||||||||| || ||||  ||| |||| ||||| ||| |||||||||||||    
T  23968438 tttgctgtgctttt-gtctttgcaattcaaaggtaagggtgggattatccttcagtaatgataatatatgatttctgaaaatt 23968519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 24441707 - 24441673
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcata 68  Q
    ||||||||||||||||||| |||||||||||||||    
T  24441707 taaggtaagggtgagactaactctcaataatcata 24441673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 29847278 - 29847314
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcata 68  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  29847278 tctaaggtaagggtgaggctaactctcaataatcata 29847314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 34 - 217
Target Start/End: Original strand, 20437024 - 20437208
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtt 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 20437123  T
Q  133 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    ||||||||||| ||||||| |||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  20437124 tgatgatgattctgaggggaatgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactg 20437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 41112090 - 41111981
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| |||||||  |||  |||||||||    
T  41112090 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaaagttagggtt 41111992  T
Q  133 tgatgatgatt 143  Q
    |||||||||||    
T  41111991 tgatgatgatt 41111981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 20851103 - 20851187
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20851103 gatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 20857730 - 20857814
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20857730 gatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 21706360 - 21706276
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21706360 gatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 21710902 - 21710818
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21710902 gatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 32651627 - 32651563
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 98  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 18712854 - 18712790
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 98  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 19663517 - 19663572
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 89  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 20805376 - 20805320
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 11158148 - 11158093
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 89  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 10811785 - 10811839
Alignment:
Q  36 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    ||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  10811785 aggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 64
Target Start/End: Complemental strand, 24476380 - 24476350
Alignment:
Q  34 taaggtaagggtgagactatctctcaataat 64  Q
    |||||||||||||||||||||||||||||||    
T  24476380 taaggtaagggtgagactatctctcaataat 24476350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 25091418 - 25091448
Alignment:
Q  34 taaggtaagggtgagactatctctcaataat 64  Q
    |||||||||||||||||||||||||||||||    
T  25091418 taaggtaagggtgagactatctctcaataat 25091448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 18271371 - 18271338
Alignment:
Q  35 aaggtaagggtgagactatctctcaataatcata 68  Q
    |||||||||||||||||| |||||||||||||||    
T  18271371 aaggtaagggtgagactaactctcaataatcata 18271338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 18276025 - 18275992
Alignment:
Q  35 aaggtaagggtgagactatctctcaataatcata 68  Q
    |||||||||||||||||| |||||||||||||||    
T  18276025 aaggtaagggtgagactaactctcaataatcata 18275992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 20044943 - 20045004
Alignment:
Q  25 ctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 86  Q
    |||||||||||||||||||||| || ||||  ||||| ||| |||| ||||| |||||||||    
T  20044943 ctacaattctaaggtaagggtgggattatccttcaatgatcttaatatataaattctgaaaa 20045004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 129; Significance: 9e-67; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 111938 - 111758
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcataattttggaaaataaattgagggttagggt 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||    
T  111938 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattgagggttagggt 111839  T
Q  132 ttgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 211  Q
    |||||||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  111838 ttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 111758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 91197 - 91257
Alignment:
Q  28 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||| ||  |||| |||||||| ||||| ||| |||||||||||||    
T  91197 caattctaaggtaagggtgggatcatctttcaataatgataatatatgatttctgaaaatt 91257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 96923 - 96983
Alignment:
Q  28 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||| ||  |||| |||||||| ||||| ||| |||||||||||||    
T  96923 caattctaaggtaagggtgggatcatctttcaataatgataatatatgatttctgaaaatt 96983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 1233 - 1055
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  1233 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 1135  T
Q  133 tgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 211  Q
    |||||| ||||||| ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  1134 tgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 1055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 50234 - 50056
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  50234 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 50136  T
Q  133 tgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 211  Q
    |||||| ||||||| ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  50135 tgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 50056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 124; Significance: 8e-64; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 36 - 213
Target Start/End: Original strand, 14398 - 14577
Alignment:
Q  36 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcata-attttggaaaataaattgagggttagggtttg 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 14497  T
Q  135 atgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctat 213  Q
    ||||||||| || ||||  ||||||| |||||||||||||||| ||||||||| |||||  |||||||||||||||||||    
T  14498 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctat 14577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 33 - 217
Target Start/End: Complemental strand, 11397 - 11212
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaata-aattgagggttagggt 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||    
T  11397 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggttagggt 11298  T
Q  132 ttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    |||||||||||| ||  ||| ||| ||| |||||||||||||||| ||||||||| ||||| | ||||||| ||||||| ||||||    
T  11297 ttgatgatgattctggagggaatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatccatactg 11212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 750 - 930
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcata-attttggaaaataaattgagggttagggt 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  750 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattgagggttagggt 849  T
Q  132 ttgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 211  Q
    ||||||| ||||||| ||||  ||||||| |||||||| |||| || ||||||| ||||||| || || ||||||||||||    
T  850 ttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatct 930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 346 - 167
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  346 ctaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 248  T
Q  133 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctat 213  Q
    ||||||||||| ||||||| ||||||| |||||||||||||| | ||||| | |  |||| ||| |||| |||||||||||    
T  247 tgatgatgattctgaggggaatgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctat 167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 33 - 210
Target Start/End: Original strand, 8574 - 8751
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa-ttgacctaattgcataattttggaaaataaattgagggttagggt 131  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||||||||||||||    
T  8574 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggttagggt 8673  T
Q  132 ttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 210  Q
    ||||||||||||||||  || ||||||| |||| ||||||||||| ||||||| ||||||| | |||||||||||||||    
T  8674 ttgatgatgattatga-tggaatgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatc 8751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 33 - 210
Target Start/End: Original strand, 1897 - 2074
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcataattttggaaaataaattgagggttagggt 131  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  1897 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggttagggt 1996  T
Q  132 ttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 210  Q
    |||||||||||| |||  || ||||||| |||| ||||||||||| ||||||| ||||||| | |||||||||||||||    
T  1997 ttgatgatgattttga-tggaatgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatc 2074  T

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Target: chr4 (Bit Score: 107; Significance: 1e-53; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 33 - 210
Target Start/End: Original strand, 8045832 - 8046009
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8045832 ctaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaattgacctaattgcatagttttggaaaataaattgagggttagggtt 8045930  T
Q  133 tgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 210  Q
    ||| ||  ||| || ||||  |||||||  ||| ||||||||||| ||||||| ||||||| |||||||||||||||||    
T  8045931 tgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatc 8046009  T

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Target: chr4; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 11848169 - 11847984
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttg------gaaaataaattgagggtt 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| |||||       ||||| |||||||||||    
T  11848169 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatcaattgagggtt 11848070  T
Q  127 agggtttgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 211  Q
    |||||||||||| |||| || || || ||||||| ||||||||||||| || || |||| ||||||| ||||||||||||||||||    
T  11848069 agggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatct 11847984  T

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Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 143
Target Start/End: Complemental strand, 53483765 - 53483650
Alignment:
Q  28 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaat-tgagggtt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| |||| |||||  ||| |||   ||    
T  53483765 caattctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaatt 53483667  T
Q  127 agggtttgatgatgatt 143  Q
    |||||||||||||||||    
T  53483666 agggtttgatgatgatt 53483650  T

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Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 15408196 - 15408139
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 89  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  15408196 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

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Target: chr4; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 16146803 - 16146885
Alignment:
Q  6 tttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||| ||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  16146803 tttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 16146885  T

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Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 8834951 - 8834895
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

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Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 13888697 - 13888641
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

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Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 14486713 - 14486661
Alignment:
Q  36 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||||||||||||||||||  ||||| |||||||| |||||||||||||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaatt 14486661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 15245271 - 15245215
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    ||||||||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15245271 taaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 27906326 - 27906266
Alignment:
Q  28 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||||||||| |||||||| || ||||| ||||| |||||||| |||||||||||||||||    
T  27906326 caattctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaatt 27906266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  39 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 15308176 - 15308120
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    |||| |||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15308176 taagttaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 14912139 - 14912081
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    |||||||||||||| |||||| |||||||| ||  |||| ||||| |||||||||||||    
T  14912139 tctaaggtaagggttagactaactctcaatgattgtaatatataacttctgaaaattga 14912081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 64
Target Start/End: Complemental strand, 15069811 - 15069781
Alignment:
Q  34 taaggtaagggtgagactatctctcaataat 64  Q
    |||||||||||||||||||||||||||||||    
T  15069811 taaggtaagggtgagactatctctcaataat 15069781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 64
Target Start/End: Complemental strand, 15076411 - 15076381
Alignment:
Q  34 taaggtaagggtgagactatctctcaataat 64  Q
    |||||||||||||||||||||||||||||||    
T  15076411 taaggtaagggtgagactatctctcaataat 15076381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 15747556 - 15747592
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataa 69  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  15747556 ctaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 33 - 214
Target Start/End: Complemental strand, 30913 - 30730
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaat-aaattgagggttagggt 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  | ||||||||| |||||||    
T  30913 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaggtaaaattgaggattagggt 30814  T
Q  132 ttgatgatgattatgaggggtatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 214  Q
    |||||||||||| ||||||| |||| |||  ||||||||||| | | |||||| || ||||  ||||||||  | |||||||||    
T  30813 ttgatgatgattttgaggggaatggtgtaacgatcatgttaaatatgttgtaaagtgatgtgcagaatgaattcctaatctata 30730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 33 - 213
Target Start/End: Complemental strand, 18225 - 18043
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcata-attttggaaaataaattgagggttagggt 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||  ||| |||||||||||||||||||| |||    
T  18225 ctaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagctttaggaaaataaattgagggttaaggt 18126  T
Q  132 ttgatgatgattatgaggggtatgggtattgatcatgttaattct-attgtaatgtaatgtttagaatgaaaacttaatctat 213  Q
    || ||||||||| | | ||| |  |||| || |||||||||||||  ||||||||| ||||  ||||||||||||||| ||||    
T  18125 ttaatgatgattctaacgggaaatggtaatggtcatgttaattctgtttgtaatgtgatgtccagaatgaaaacttaacctat 18043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 36 - 217
Target Start/End: Original strand, 3295 - 3478
Alignment:
Q  36 aggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttg 134  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||| |||  ||||  |  ||||||||||||||||||||    
T  3295 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggggataaaattgagggttagggtttg 3394  T
Q  135 atgatgattatgaggggtatgggtattg-atcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    ||||||||| ||||||| ||||||| || |||||||||||| | ||||||||| ||||| ||||||||| ||||||||||||||    
T  3395 atgatgattctgaggggaatgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactg 3478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 36 - 217
Target Start/End: Original strand, 3624 - 3806
Alignment:
Q  36 aggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttg 134  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||| |||  |||   |  ||||||||||||||||||||    
T  3624 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttg 3723  T
Q  135 atgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 217  Q
    ||||||||| ||||||| ||||||| |||||||||||||| | ||||||||| |||||  |||||||| ||||||||||||||    
T  3724 atgatgattctgagggggatgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatactg 3806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 1732 - 1841
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||    
T  1732 ctaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttagggtt 1830  T
Q  133 tgatgatgatt 143  Q
    |||||||||||    
T  1831 tgatgatgatt 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 5755 - 5864
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||    
T  5755 ctaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttagggtt 5853  T
Q  133 tgatgatgatt 143  Q
    |||||||||||    
T  5854 tgatgatgatt 5864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 987 - 904
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| ||||    
T  987 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 8132 - 8049
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| ||||    
T  8132 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10326 - 10239
Alignment:
Q  1 acggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  10326 acggatttgctgtgctttttgtctctacaattctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 492996 - 493082
Alignment:
Q  1 acggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||| |||||||||||||||||    
T  492996 acggatttgctgtgctttttgtctctgcaattctaaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaatt 493082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 143
Target Start/End: Original strand, 45273 - 45384
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaat-tgagggttaggg 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| |||| |||||  ||| |||   ||||||    
T  45273 tctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattaggg 45371  T
Q  131 tttgatgatgatt 143  Q
    |||||||||||||    
T  45372 tttgatgatgatt 45384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1880 - 1967
Alignment:
Q  1 acggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  1880 acggatttgctgtgctttttgtctttgcaattgtaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 16875 - 16811
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 98  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 135522 - 135438
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||| ||||||| | ||||||||||||||| |||||| ||||| |||||| ||||||| |||||||||||||||||    
T  135522 gatttgctgtgctatttgtctttgcaattctaaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 163388 - 163352
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcata 68  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  163388 tctaaggtaagggtgaggctaactctcaataatcata 163352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 116951 - 116887
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 98  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 60474 - 60441
Alignment:
Q  35 aaggtaagggtgagactatctctcaataatcata 68  Q
    |||||||||||||||||| |||||||||||||||    
T  60474 aaggtaagggtgagactaactctcaataatcata 60441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 17700 - 17643
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 89  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  17700 tctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 40530 - 40587
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 89  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  40530 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 135530 - 135473
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 89  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  135530 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 8 - 72
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 98  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 9404 - 9336
Alignment:
Q  20 tgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  9404 tgtctctacaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 13687 - 13623
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 98  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 101928 - 101992
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 98  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 79463 - 79545
Alignment:
Q  6 tttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||| ||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  79463 tttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 79545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 22594 - 22646
Alignment:
Q  35 aaggtaagggtgagactatctctcaataatcataatctataatttctgaaaat 87  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22594 aaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3370 - 3457
Alignment:
Q  1 acggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||||||||| ||||||||||||| | |||||||||||||||||||| | ||||| ||||| |   |||| |||||||||||||||||    
T  3370 acggatttgccgtgctttttgtctttgcaattctaaggtaagggtgatattatctttcaatgaatttaatatataatttctgaaaatt 3457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 34276 - 34331
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 89  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 35437 - 35495
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    |||||||||||||| |||||| |||||||| ||  |||| ||||| |||||||||||||    
T  35437 tctaaggtaagggtaagactaactctcaatgattgtaatgtataacttctgaaaattga 35495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 5842 - 5922
Alignment:
Q  18 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 98  Q
    ||||||| | ||||||||||||||||||| || ||||| ||||| || ||||| ||||||||||||||||| | |||||||    
T  5842 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattg 5922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 12352 - 12296
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 1080 - 997
Alignment:
Q  4 gatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||||||||||||||| |||| | ||||||||||||||||||| ||  ||||||||||| | ||||| ||| |||||||||||||    
T  1080 gatttgctgtgctttt-gtctttgcaattctaaggtaagggtgggatcatctctcaatagtgataatatatgatttctgaaaatt 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 1441 - 1378
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 97  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 1378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 89
Target Start/End: Original strand, 14997 - 15052
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 89  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  14997 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 49943 - 50025
Alignment:
Q  6 tttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||| |||||| ||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| | |||||||| ||||||    
T  49943 tttgttgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctaaaaatt 50025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 23564 - 23624
Alignment:
Q  28 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||||||||||| || ||||| | ||| |||||||| |||||||||||||||||    
T  23564 caattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaatt 23624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 13879 - 13947
Alignment:
Q  18 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 86  Q
    ||||||| | ||||||||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  13879 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 13947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 1504 - 1453
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 85  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||||||||||    
T  1504 taaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 39508 - 39563
Alignment:
Q  35 aaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    |||||||||||||| ||| |||||||| |||||||| ||||||||| |||||||||    
T  39508 aaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 16056 - 16117
Alignment:
Q  25 ctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 86  Q
    |||||||||||||||||||||| || ||||| |||||| | ||||| ||| |||||||||||    
T  16056 ctacaattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaa 16117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 2628 - 2684
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    ||||||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  2628 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 10546 - 10605
Alignment:
Q  29 aattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    |||||||||||||| ||| || ||||| ||||| ||| |||| |||||||||||||||||    
T  10546 aattctaaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaatt 10605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 770 - 680
Alignment:
Q  33 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcataattttggaaaataaattgag 122  Q
    |||||||||||||| || ||||| ||||| ||| |||| ||||||||||| |||||| ||||||  | ||| || | ||||||||||||||    
T  770 ctaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattgag 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 676 - 721
Alignment:
Q  35 aaggtaagggtgagactatctctcaataatcataatctataatttc 80  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||    
T  676 aaggtaagggtgagactaactctcaatgatcttaatgtataatttc 721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 614 - 650
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcata 68  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  614 tctaaggtaagggtgaggctaactctcaataatcata 650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 788 - 732
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    ||||||| ||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  788 taaggtaggggtgaggctaactctcaatgattataatatataacttctgaaaattga 732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 4014 - 3962
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaa 84  Q
    ||||||||||||||||||||| |  |||||||||||| | ||||| |||||||    
T  4014 tctaaggtaagggtgagactaacattcaataatcatagtgtataaattctgaa 3962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 25519 - 25555
Alignment:
Q  32 tctaaggtaagggtgagactatctctcaataatcata 68  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  25519 tctaaggtaagggtgaggctaactctcaataatcata 25555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 11681 - 11630
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataa--tctataatttctga 83  Q
    ||||||||||||||||||| ||||||||||| ||||  | ||||||||||||    
T  11681 taaggtaagggtgagactaactctcaataattataaattatataatttctga 11630  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 73337 - 73285
Alignment:
Q  36 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 88  Q
    ||||||||||| || ||||| ||||| |||||||| |||||||| ||||||||    
T  73337 aggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaatt 73285  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 121958 - 121902
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    ||||||||||||||| ||| |||||||| || ||||| |||||  ||||||||||||    
T  121958 taaggtaagggtgaggctaactctcaatgattataatatataaaatctgaaaattga 121902  T

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Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 132834 - 132778
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 90  Q
    ||||||||||||||| ||| |||||||| || ||||| |||||  ||||||||||||    
T  132834 taaggtaagggtgaggctaactctcaatgattataatatataaaatctgaaaattga 132778  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 69801 - 69749
Alignment:
Q  34 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 86  Q
    ||||||||||||||||||| || ||||| ||| |||| |||||||| ||||||    
T  69801 taaggtaagggtgagactaactttcaatgatcttaatatataatttatgaaaa 69749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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